Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

5567075 .. 5571149

Gene Structure 4075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g10210.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2787 bp

ATGAATAAAGCTTTGCTTCTGCTTTTTTTGGTTTTCTGTAATAGTTCTCACTCTAGTGGACTCATTACTAATGTCACCACAAGACCTGATGTATTGAACATTGGTTCGATATTCACTTTCGATTCCGTCATTGGCAAAATCGCAAAACTTGCAATATCAACTGCAGTTGAAGATGTGAATTCCAATCCCAACATTCTCAATGGAACAAAGCTCTCACTCAAATTGCACAACACCAAATCGAGTGACTTCCTCGGAATTGTTGAAGCATTGCAGTTTATGGAGAATGACACAGTGGCCATAATTGGCCCTCAATTCTCAGCTACAGCTCATGTTATCACACACATAGCAAATGAGCTCCAAGTGCCTTTGCTATCATTTGCAGCAACTGATCCCACTCTATCTCCTGTTCAGTACCCTTTCTTTGTTCGAACAACGCGAAGCGATCTCTTCCAGATGACAGCAGTGGTAGACCTGGTTGTATACTACGAGTGGAGAGACGTCATAGCAATATATGTGGATGACGACTTTGGGAGAAATGCTATTGCTTCCTTGGGTGACAAGCTAGCCGAAAAGCGCTGCAAGATTTCATACAAAGTGCCTTTGACTCCCACAGCAACAAAAGATGAGATCAGAAAGGCACTGATCAGTGTGGCTGCAATGGAATCTAGGATTCTTATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTGCTAGAAGAAGCGCATGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACAGATCCTTCTCTCCCTCTAGTAGCAACTAACAACATCCAAGGCGTGCTCACATTGCGAATGTACACACCCGATTCACAACTCAAGATGGATTTCAAGTCGAGATGGAGCAACTTGACTAGGGCAAAAAGATTACTTAATGACACTTCTTTGGGGCTAAACACATATGGCCTGTATGCGTATGATTCAGTGTTGCTTCTTGCTCAAGCAATCGAATCATTTTTCGCTAATGGGGGCAACATTTCCTTTTCAAATGACACAAATTTGAGGGAATTAAGTGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAATCATTTCAGAAGTTAACATAACTGGCTTAACAGGGCTTATGAAGTTTGATGCGGATGGGAACTTGCTCAATCCTACATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGAACTATTGGCTATTGGTCTAACTCCTCTGGTTTACATGTTCTTCCTCCAGAAAAGCTCCAAATGAAGCTGCAGACTAATGACCCCAGCGCCGGTGCTCAAAAACTGTACAGTGTGATCTGGCCTGGACAAACAACTCAGAAGCCTCGTGGATGGGCTTTCCCGGACAATGGAAGAAAGCTCAGGATTGGAGTCCCCAATCGAGTCAGCTACCACGAGTTTGTAGGTGTAAAAGGCACTGATATCACTGGTTACTGCATTGAGGTCTTTCAAGCTGCACTAAATGAGTTACCATATGGTGTACCATTCAAATATGTCTCTTTTGGAGATGGTACCAAAAACCCAGAAAACAATGATCTTCTGCACAGAATCCAAATTGGGGAATTTGATGGTATAGTAGGAGATATTACAATCACTACAAACAGAACAAAGATGGTGGATTTTACACAACCTTATATTGAGTCAGGGCTAGTTGTGGTTGCTCCAATAAGGAAGATGAATTCTAGTGCTTGGGCTTTTCTGAGACCTTTTACTCCAATGATGTGGGGTGTTACTGGTGTGTTCTTCCTAGTTGTGGGAGCAGTTGTTTGGATTTTGGAGCGCAGGACTAATGAGGATTTCAGGGGGCCTCCAAGAAGGCAATTTGTCACAATTGTTTGGTTTAGCTTTTCGACTTTGTTCTTCTCCCAGAAAGAGAAAACTGGCAGCACACTTGGTCGCTTTGTGCTGATCATATGGCTATTTGTAGTGCTAATACTCAACTCCAGCTACATTGCAAGCTTGACGTCGATCCTCACAGTGGAGCAACTTTCTTCACCTGTGAAAGGGATTGAAAGTTTAGCAACAAGCACTGATCCCATTGGTTTTCTAAGGGGTTCCTTTGCTGAAGCTTACTTAACCGACGAGCTGAACATACATCACAACAGACTCTTTCCCCTTAACTCGCCTGAAGAGTATGAGAAGGCCTTGAAGAATGGTCCTAGTGCAGGTGGTGTTGCTGCAGTGATTGATGAGCGTGCATACATGGAGCTTTTCCTCTCTAGTCGATGTGGATACAGTATTGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGATTTGCCTTTCCAAGGGACTCGCCATTGGCAATCGACATGTCGACCGCAATATTGAAGCTATCGGAGAACGGAATCCTTCAAAAGATTCATGACAAATGGCTAATGAAAAGTGCTTGCAGTGCAGAAGGAGCAAAGCAGGCAGTAGACCGCCTTCAGCTGAAGAGCTTCTGGGGACTCTTTCTACTAAGCGGCATTGCTTGCTTTCTTGCTCTCATTCTTCATGTTCTTCGCATGGTTCAACAGTACTACCGGCATGTAGATTGCGACATTGAGAGCTCGCAATCTACACGACGACTCAAGTCGTTTGTTTCATTTGTAAATAAGAGGGAACGAGAAGTGAAAAGCAGGTCCAAGAGAAGAAGGACAGAGAATAAAGCCTCAAGTAAGGTAGTGCATGATCAAGAATGCAGCAGTAGTGATGGTTTGGAGCGGGAAGTTCAGCTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

929

Amino Acids

103.51

Weight (kDa)

7.95

Isoelectric Point (pI)

41.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 160	1e-41	Receptor family ligand binding region
Peripla_BP_6	PF13458	5 - 116	4.5e-06	Periplasmic binding protein
ANF_receptor	PF01094	182 - 277	4.5e-16	Receptor family ligand binding region
SBP_bac_3	PF00497	342 - 680	4.2e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	360 - 441	1.5e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	461 - 712	1.9e-35	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2219
AatII	GACGTC	2 cut(s)	501, 2030
Acc36I	ACCTGC	2 cut(s)	2219, 2673
Acc65I	GGTACC	1 cut(s)	1574
AccB1I	GGYRCC	1 cut(s)	1574
AccBSI	CCGCTC	1 cut(s)	2767
AccI	GTMKAC	4 cut(s)	468, 480, 2378, 2481
AccII	CGCG	1 cut(s)	436
AciI	CCGC	5 cut(s)	1184, 2382, 2485, 2526, 2767
AclWI	GGATC	4 cut(s)	383, 791, 2026, 2090
AcoI	YGGCCR	1 cut(s)	294
AcsI	RAATTY	4 cut(s)	178, 1054, 1625, 1741
AcuI	CTGAAG	4 cut(s)	2148, 2211, 2474, 2516
AcyI	GRCGYC	2 cut(s)	498, 2027
AfaI	GTAC	6 cut(s)	413, 857, 1352, 1545, 1576, 2582
AfeI	AGCGCT	1 cut(s)	575
AfiI	CCNNNNNNNGG	8 cut(s)	1334, 1412, 1621, 1816, 2041, 2066, 2228, 2349
AflIII	ACRYGT	2 cut(s)	1279, 2373
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	2 cut(s)	471, 1366
AleI	CACNNNNGTG	1 cut(s)	54
Alw21I	GWGCWC	4 cut(s)	357, 843, 1342, 2615
Alw26I	GTCTC	3 cut(s)	489, 1564, 1759
AlwI	GGATC	4 cut(s)	383, 791, 2026, 2090
AlwNI	CAGNNNCTG	1 cut(s)	386
Aor51HI	AGCGCT	1 cut(s)	575
AoxI	GGCC	6 cut(s)	294, 304, 961, 1364, 1868, 2205
ApeKI	GCWGC	8 cut(s)	380, 576, 653, 1312, 1517, 1947, 2240, 2745
ApoI	RAATTY	4 cut(s)	178, 1054, 1625, 1741
Asp700I	GAANNNNTTC	2 cut(s)	1103, 2501
Asp718I	GGTACC	1 cut(s)	1574
AspLEI	GCGC	4 cut(s)	576, 724, 1334, 1845
AspS9I	GGNCC	4 cut(s)	305, 1868, 2219, 2685
AsuC2I	CCSGG	1 cut(s)	1406
AsuHPI	GGTGA	4 cut(s)	67, 566, 2049, 2311
AsuII	TTCGAA	1 cut(s)	427
AsuNHI	GCTAGC	1 cut(s)	562
AvaII	GGWCC	2 cut(s)	2219, 2685
BalI	TGGCCA	1 cut(s)	296
BanI	GGYRCC	1 cut(s)	1574
BanII	GRGCYC	2 cut(s)	357, 2615
BarI	GAAGNNNNNNTAC	2 cut(s)	2472, 2504
BauI	CACGAG	2 cut(s)	1389, 1457
Bbv12I	GWGCWC	4 cut(s)	357, 843, 1342, 2615
BbvI	GCAGC	8 cut(s)	392, 563, 640, 1299, 1504, 1959, 2227, 2757
BccI	CCATC	9 cut(s)	733, 874, 891, 1181, 1389, 1565, 1625, 1669, 2750
BciT130I	CCWGG	2 cut(s)	473, 1368
BciVI	GTATCC	1 cut(s)	2288
BclI	TGATCA	3 cut(s)	642, 1971, 2734
BcnI	CCSGG	1 cut(s)	1406
BcoDI	GTCTC	3 cut(s)	489, 1564, 1759
BcuI	ACTAGT	1 cut(s)	692
BfmI	CTRYAG	4 cut(s)	162, 321, 1313, 2241
BfoI	RGCGCY	2 cut(s)	577, 1335
BfuAI	ACCTGC	2 cut(s)	2219, 2673
BfuI	GTATCC	1 cut(s)	2288
BisI	GCNGC	9 cut(s)	381, 577, 654, 1313, 1518, 1948, 2241, 2527, 2746
BlsI	GCNGC	9 cut(s)	382, 578, 655, 1314, 1519, 1949, 2242, 2528, 2747
BmcAI	AGTACT	1 cut(s)	2582
Bme1390I	CCNGG	3 cut(s)	473, 1368, 1406
Bme18I	GGWCC	2 cut(s)	2219, 2685
BmgT120I	GGNCC	4 cut(s)	305, 1868, 2219, 2685
BmiI	GGNNCC	3 cut(s)	1576, 1869, 2119
BmrFI	CCNGG	3 cut(s)	473, 1368, 1406
BmsI	GCATC	2 cut(s)	1081, 1171
BmtI	GCTAGC	1 cut(s)	566
BoxI	GACNNNNGTC	1 cut(s)	2635
BpmI	CTGGAG	2 cut(s)	1275, 1990
Bpu10I	CCTNAGC	1 cut(s)	1424
Bpu14I	TTCGAA	1 cut(s)	427
BpuEI	CTTGAG	4 cut(s)	860, 981, 2618, 2701
BpuMI	CCSGG	1 cut(s)	1406
BsaBI	GATNNNNATC	2 cut(s)	674, 795
BsaHI	GRCGYC	2 cut(s)	498, 2027
BsaI	GGTCTC	1 cut(s)	1759
BsaJI	CCNNGG	4 cut(s)	250, 549, 832, 2348
BsaXI	ACNNNNNCTCC	4 cut(s)	385, 415, 1812, 1842
Bsc4I	CCNNNNNNNGG	8 cut(s)	1334, 1412, 1621, 1816, 2041, 2066, 2228, 2349
Bse118I	RCCGGY	2 cut(s)	1334, 2586
Bse1I	ACTGG	4 cut(s)	1159, 1495, 1801, 1948
Bse3DI	GCAATG	5 cut(s)	266, 663, 845, 2013, 2529
Bse8I	GATNNNNATC	2 cut(s)	674, 795
BseBI	CCWGG	2 cut(s)	473, 1368
BseDI	CCNNGG	4 cut(s)	250, 549, 832, 2348
BseGI	GGATG	4 cut(s)	523, 828, 1192, 1400
BseJI	GATNNNNATC	2 cut(s)	674, 795
BseLI	CCNNNNNNNGG	8 cut(s)	1334, 1412, 1621, 1816, 2041, 2066, 2228, 2349
BseMI	GCAATG	5 cut(s)	266, 663, 845, 2013, 2529
BseMII	CTCAG	4 cut(s)	330, 1394, 1438, 1754
BseNI	ACTGG	4 cut(s)	1159, 1495, 1801, 1948
BseRI	GAGGAG	1 cut(s)	1258
BseXI	GCAGC	8 cut(s)	392, 563, 640, 1299, 1504, 1959, 2227, 2757
BseYI	CCCAGC	1 cut(s)	1328
BsgI	GTGCAG	5 cut(s)	665, 1503, 1589, 2247, 2478
Bsh1236I	CGCG	1 cut(s)	436
Bsh1285I	CGRYCG	1 cut(s)	2382
BshFI	GGCC	6 cut(s)	296, 306, 963, 1366, 1870, 2207
BshNI	GGYRCC	1 cut(s)	1574
BsiEI	CGRYCG	1 cut(s)	2382
BsiHKAI	GWGCWC	4 cut(s)	357, 843, 1342, 2615
BsiSI	CCGG	3 cut(s)	1335, 1406, 2587
BslFI	GGGAC	4 cut(s)	1252, 1421, 2366, 2523
BslI	CCNNNNNNNGG	8 cut(s)	1334, 1412, 1621, 1816, 2041, 2066, 2228, 2349
BsmAI	GTCTC	3 cut(s)	489, 1564, 1759
BsmBI	CGTCTC	1 cut(s)	489
BsmFI	GGGAC	4 cut(s)	1252, 1421, 2366, 2523
BsmI	GAATGC	1 cut(s)	2747
BsnI	GGCC	6 cut(s)	296, 306, 963, 1366, 1870, 2207
Bso31I	GGTCTC	1 cut(s)	1759
Bsp119I	TTCGAA	1 cut(s)	427
Bsp1286I	GDGCHC	4 cut(s)	357, 843, 1342, 2615
Bsp1407I	TGTACA	2 cut(s)	855, 1350
BspACI	CCGC	5 cut(s)	1184, 2382, 2485, 2526, 2767
BspANI	GGCC	6 cut(s)	296, 306, 963, 1366, 1870, 2207
BspCNI	CTCAG	4 cut(s)	329, 1393, 1437, 1755
BspFNI	CGCG	1 cut(s)	436
BspHI	TCATGA	1 cut(s)	2425
BspLI	GGNNCC	3 cut(s)	1576, 1869, 2119
BspMAI	CTGCAG	3 cut(s)	166, 1317, 2245
BspMI	ACCTGC	2 cut(s)	2219, 2673
BspOI	GCTAGC	1 cut(s)	566
BspPI	GGATC	4 cut(s)	383, 791, 2026, 2090
BspQI	GCTCTTC	1 cut(s)	2492
BspT104I	TTCGAA	1 cut(s)	427
BspT107I	GGYRCC	1 cut(s)	1574
BspTNI	GGTCTC	1 cut(s)	1759
BsrBI	CCGCTC	1 cut(s)	2767
BsrDI	GCAATG	5 cut(s)	266, 663, 845, 2013, 2529
BsrFI	RCCGGY	2 cut(s)	1334, 2586
BsrGI	TGTACA	2 cut(s)	855, 1350
BsrI	ACTGG	4 cut(s)	1159, 1495, 1801, 1948
BssAI	RCCGGY	2 cut(s)	1334, 2586
BssECI	CCNNGG	4 cut(s)	250, 549, 832, 2348
BssNAI	GTATAC	1 cut(s)	481
BssNI	GRCGYC	2 cut(s)	498, 2027
BssSI	CACGAG	2 cut(s)	1389, 1457
BssT1I	CCWWGG	3 cut(s)	549, 832, 2348
Bst1107I	GTATAC	1 cut(s)	481
Bst2BI	CACGAG	2 cut(s)	1389, 1457
Bst2UI	CCWGG	2 cut(s)	473, 1368
Bst4CI	ACNGT	6 cut(s)	292, 1350, 1355, 2041, 2300, 2580
Bst6I	CTCTTC	3 cut(s)	452, 2187, 2492
BstACI	GRCGYC	2 cut(s)	498, 2027
BstAPI	GCANNNNNTGC	2 cut(s)	149, 2535
BstAUI	TGTACA	2 cut(s)	855, 1350
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	9 cut(s)	564, 839, 1118, 2020, 2259, 2452, 2475, 2536, 2615
BstDEI	CTNAG	6 cut(s)	316, 1380, 1424, 1763, 2111, 2522
BstENI	CCTNNNNNAGG	3 cut(s)	2064, 2226, 2347
BstF5I	GGATG	4 cut(s)	523, 828, 1192, 1400
BstFNI	CGCG	1 cut(s)	436
BstH2I	RGCGCY	2 cut(s)	577, 1335
BstHHI	GCGC	4 cut(s)	576, 724, 1334, 1845
BstMAI	GTCTC	3 cut(s)	489, 1564, 1759
BstMCI	CGRYCG	1 cut(s)	2382
BstMWI	GCNNNNNNNGC	7 cut(s)	149, 361, 847, 2456, 2465, 2474, 2535
BstNI	CCWGG	2 cut(s)	473, 1368
BstNSI	RCATGY	3 cut(s)	1283, 2377, 2594
BstPAI	GACNNNNGTC	1 cut(s)	2635
BstSCI	CCNGG	3 cut(s)	471, 1366, 1404
BstSFI	CTRYAG	4 cut(s)	162, 321, 1313, 2241
BstUI	CGCG	1 cut(s)	436
BstV1I	GCAGC	8 cut(s)	392, 563, 640, 1299, 1504, 1959, 2227, 2757
BstX2I	RGATCY	1 cut(s)	796
BstXI	CCANNNNNNTGG	1 cut(s)	1785
BstYI	RGATCY	1 cut(s)	796
BstZ17I	GTATAC	1 cut(s)	481
BsuI	GTATCC	1 cut(s)	2288
BsuRI	GGCC	6 cut(s)	296, 306, 963, 1366, 1870, 2207
BtsCI	GGATG	4 cut(s)	523, 828, 1192, 1400
BtsI	GCAGTG	3 cut(s)	468, 2250, 2461
BveI	ACCTGC	2 cut(s)	2219, 2673
Cac8I	GCNNGC	9 cut(s)	564, 839, 1118, 2020, 2259, 2452, 2475, 2536, 2615
CaiI	CAGNNNCTG	1 cut(s)	386
CciI	TCATGA	1 cut(s)	2425
CfoI	GCGC	4 cut(s)	576, 724, 1334, 1845
Cfr10I	RCCGGY	2 cut(s)	1334, 2586
Cfr13I	GGNCC	4 cut(s)	305, 1868, 2219, 2685
CsiI	ACCWGGT	1 cut(s)	471
Csp6I	GTAC	6 cut(s)	412, 856, 1351, 1544, 1575, 2581
CspCI	CAANNNNNGTGG	4 cut(s)	495, 530, 1659, 1694
CviQI	GTAC	6 cut(s)	412, 856, 1351, 1544, 1575, 2581
DdeI	CTNAG	6 cut(s)	316, 1380, 1424, 1763, 2111, 2522
EaeI	YGGCCR	1 cut(s)	294
Eam1104I	CTCTTC	3 cut(s)	452, 2187, 2492
EarI	CTCTTC	3 cut(s)	452, 2187, 2492
Ecl136II	GAGCTC	2 cut(s)	355, 2613
Eco130I	CCWWGG	3 cut(s)	549, 832, 2348
Eco147I	AGGCCT	1 cut(s)	2207
Eco24I	GRGCYC	2 cut(s)	357, 2615
Eco31I	GGTCTC	1 cut(s)	1759
Eco32I	GATATC	1 cut(s)	1486
Eco47I	GGWCC	2 cut(s)	2219, 2685
Eco47III	AGCGCT	1 cut(s)	575
Eco53kI	GAGCTC	2 cut(s)	355, 2613
Eco57I	CTGAAG	4 cut(s)	2148, 2211, 2474, 2516
EcoICRI	GAGCTC	2 cut(s)	355, 2613
EcoNI	CCTNNNNNAGG	3 cut(s)	2064, 2226, 2347
EcoO109I	RGGNCCY	1 cut(s)	1868
EcoRI	GAATTC	2 cut(s)	178, 1741
EcoRII	CCWGG	2 cut(s)	471, 1366
EcoRV	GATATC	1 cut(s)	1486
EcoT14I	CCWWGG	3 cut(s)	549, 832, 2348
EcoT38I	GRGCYC	2 cut(s)	357, 2615
ErhI	CCWWGG	3 cut(s)	549, 832, 2348
Esp3I	CGTCTC	1 cut(s)	489
FalI	AAGNNNNNCTT	2 cut(s)	32, 2763
FaqI	GGGAC	4 cut(s)	1252, 1421, 2366, 2523
FauI	CCCGC	1 cut(s)	2760
FauNDI	CATATG	3 cut(s)	958, 1537, 1976
FbaI	TGATCA	3 cut(s)	642, 1971, 2734
FblI	GTMKAC	4 cut(s)	468, 480, 2378, 2481
Fnu4HI	GCNGC	9 cut(s)	381, 577, 654, 1313, 1518, 1948, 2241, 2527, 2746
FokI	GGATG	4 cut(s)	530, 815, 1199, 1407
FriOI	GRGCYC	2 cut(s)	357, 2615
Fsp4HI	GCNGC	9 cut(s)	381, 577, 654, 1313, 1518, 1948, 2241, 2527, 2746
GlaI	GCGC	4 cut(s)	575, 723, 1333, 1844
GluI	GCNGC	9 cut(s)	381, 577, 654, 1313, 1518, 1948, 2241, 2527, 2746
GsaI	CCCAGC	1 cut(s)	1332
GsuI	CTGGAG	2 cut(s)	1275, 1990
HaeII	RGCGCY	2 cut(s)	577, 1335
HaeIII	GGCC	6 cut(s)	296, 306, 963, 1366, 1870, 2207
HapII	CCGG	3 cut(s)	1335, 1406, 2587
HhaI	GCGC	4 cut(s)	576, 724, 1334, 1845
Hin1I	GRCGYC	2 cut(s)	498, 2027
Hin6I	GCGC	4 cut(s)	574, 722, 1332, 1843
HinP1I	GCGC	4 cut(s)	574, 722, 1332, 1843
HincII	GTYRAC	2 cut(s)	1147, 2379
HindII	GTYRAC	2 cut(s)	1147, 2379
HindIII	AAGCTT	3 cut(s)	9, 2020, 2130
HpaI	GTTAAC	1 cut(s)	1147
HpaII	CCGG	3 cut(s)	1335, 1406, 2587
HphI	GGTGA	4 cut(s)	67, 566, 2049, 2311
Hpy188I	TCNGA	6 cut(s)	254, 632, 1141, 1383, 1764, 2401
Hpy188III	TCNNGA	9 cut(s)	451, 877, 894, 1088, 1292, 1426, 2312, 2426, 2738
Hpy99I	CGWCG	3 cut(s)	2032, 2147, 2631
HpyAV	CCTTC	7 cut(s)	810, 1872, 2197, 2423, 2456, 2498, 2691
HpyCH4III	ACNGT	6 cut(s)	292, 1350, 1355, 2041, 2300, 2580
HpyCH4IV	ACGT	2 cut(s)	498, 2027
HpyF10VI	GCNNNNNNNGC	7 cut(s)	149, 361, 847, 2456, 2465, 2474, 2535
HpyF3I	CTNAG	6 cut(s)	316, 1380, 1424, 1763, 2111, 2522
HpySE526I	ACGT	2 cut(s)	498, 2027
Hsp92I	GRCGYC	2 cut(s)	498, 2027
HspAI	GCGC	4 cut(s)	574, 722, 1332, 1843
KpnI	GGTACC	1 cut(s)	1578
Ksp22I	TGATCA	3 cut(s)	642, 1971, 2734
KspAI	GTTAAC	1 cut(s)	1147
LguI	GCTCTTC	1 cut(s)	2492
Lsp1109I	GCAGC	8 cut(s)	392, 563, 640, 1299, 1504, 1959, 2227, 2757
LweI	GCATC	2 cut(s)	1081, 1171
MabI	ACCWGGT	1 cut(s)	471
MaeII	ACGT	2 cut(s)	498, 2027
MaeIII	GTNAC	7 cut(s)	73, 242, 554, 1493, 1530, 1792, 1888
MbiI	CCGCTC	1 cut(s)	2767
MfeI	CAATTG	2 cut(s)	1121, 1893
MflI	RGATCY	1 cut(s)	796
MhlI	GDGCHC	4 cut(s)	357, 843, 1342, 2615
MlsI	TGGCCA	1 cut(s)	296
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	9 cut(s)	54, 598, 1443, 1455, 1712, 2163, 2348, 2505, 2625
Mox20I	TGGCCA	1 cut(s)	296
MroXI	GAANNNNTTC	2 cut(s)	1103, 2501
MscI	TGGCCA	1 cut(s)	296
MseI	TTAA	6 cut(s)	930, 1067, 1146, 1160, 2138, 2181
MslI	CAYNNNNRTG	3 cut(s)	54, 1223, 2324
Msp20I	TGGCCA	1 cut(s)	296
MspA1I	CMGCKG	1 cut(s)	2494
MspI	CCGG	3 cut(s)	1335, 1406, 2587
MspR9I	CCNGG	3 cut(s)	473, 1368, 1406
MunI	CAATTG	2 cut(s)	1121, 1893
Mva1269I	GAATGC	1 cut(s)	2747
MvaI	CCWGG	2 cut(s)	473, 1368
MvnI	CGCG	1 cut(s)	436
MwoI	GCNNNNNNNGC	7 cut(s)	149, 361, 847, 2456, 2465, 2474, 2535
NciI	CCSGG	1 cut(s)	1406
NdeI	CATATG	3 cut(s)	958, 1537, 1976
NheI	GCTAGC	1 cut(s)	562
NlaIV	GGNNCC	3 cut(s)	1576, 1869, 2119
NmuCI	GTSAC	4 cut(s)	73, 242, 554, 1888
NspI	RCATGY	3 cut(s)	1283, 2377, 2594
NspV	TTCGAA	1 cut(s)	427
OliI	CACNNNNGTG	1 cut(s)	54
PagI	TCATGA	1 cut(s)	2425
PaqCI	CACCTGC	1 cut(s)	2219
PceI	AGGCCT	1 cut(s)	2207
PciI	ACATGT	2 cut(s)	1279, 2373
PciSI	GCTCTTC	1 cut(s)	2492
PcsI	WCGNNNNNNNCGW	1 cut(s)	433
PctI	GAATGC	1 cut(s)	2747
PdmI	GAANNNNTTC	2 cut(s)	1103, 2501
PfoI	TCCNGGA	1 cut(s)	1404
PkrI	GCNGC	9 cut(s)	382, 578, 655, 1314, 1519, 1949, 2242, 2528, 2747
PleI	GAGTC	9 cut(s)	54, 598, 1442, 1454, 1711, 2163, 2348, 2505, 2625
PpsI	GAGTC	9 cut(s)	54, 598, 1442, 1454, 1711, 2163, 2348, 2505, 2625
PscI	ACATGT	2 cut(s)	1279, 2373
PshAI	GACNNNNGTC	1 cut(s)	2635
Psp124BI	GAGCTC	2 cut(s)	357, 2615
Psp6I	CCWGG	2 cut(s)	471, 1366
PspFI	CCCAGC	1 cut(s)	1328
PspGI	CCWGG	2 cut(s)	471, 1366
PspN4I	GGNNCC	3 cut(s)	1576, 1869, 2119
PspPI	GGNCC	4 cut(s)	305, 1868, 2219, 2685
PstI	CTGCAG	3 cut(s)	166, 1317, 2245
PstNI	CAGNNNCTG	1 cut(s)	386
PsuI	RGATCY	1 cut(s)	796
PvuII	CAGCTG	1 cut(s)	2494
RsaI	GTAC	6 cut(s)	413, 857, 1352, 1545, 1576, 2582
RsaNI	GTAC	6 cut(s)	412, 856, 1351, 1544, 1575, 2581
RseI	CAYNNNNRTG	3 cut(s)	54, 1223, 2324
SacI	GAGCTC	2 cut(s)	357, 2615
SalI	GTCGAC	1 cut(s)	2377
SapI	GCTCTTC	1 cut(s)	2492
SaqAI	TTAA	6 cut(s)	930, 1067, 1146, 1160, 2138, 2181
SatI	GCNGC	9 cut(s)	381, 577, 654, 1313, 1518, 1948, 2241, 2527, 2746
Sau96I	GGNCC	4 cut(s)	305, 1868, 2219, 2685
ScaI	AGTACT	1 cut(s)	2582
SchI	GAGTC	9 cut(s)	54, 598, 1443, 1455, 1712, 2163, 2348, 2505, 2625
ScrFI	CCNGG	3 cut(s)	473, 1368, 1406
SduI	GDGCHC	4 cut(s)	357, 843, 1342, 2615
SexAI	ACCWGGT	1 cut(s)	471
SfaNI	GCATC	2 cut(s)	1081, 1171
SfcI	CTRYAG	4 cut(s)	162, 321, 1313, 2241
SfuI	TTCGAA	1 cut(s)	427
SgrAI	CRCCGGYG	1 cut(s)	1334
SinI	GGWCC	2 cut(s)	2219, 2685
SmiMI	CAYNNNNRTG	3 cut(s)	54, 1223, 2324
SmlI	CTYRAG	4 cut(s)	875, 996, 2633, 2716
SmoI	CTYRAG	4 cut(s)	875, 996, 2633, 2716
SpeI	ACTAGT	1 cut(s)	692
SseBI	AGGCCT	1 cut(s)	2207
SsiI	CCGC	5 cut(s)	1184, 2382, 2485, 2526, 2767
SspI	AATATT	1 cut(s)	2388
SstI	GAGCTC	2 cut(s)	357, 2615
StuI	AGGCCT	1 cut(s)	2207
StyD4I	CCNGG	3 cut(s)	471, 1366, 1404
StyI	CCWWGG	3 cut(s)	549, 832, 2348
TaaI	ACNGT	6 cut(s)	292, 1350, 1355, 2041, 2300, 2580
TaiI	ACGT	2 cut(s)	501, 2030
TatI	WGTACW	3 cut(s)	855, 1350, 2580
TauI	GCSGC	1 cut(s)	2529
Tru1I	TTAA	6 cut(s)	930, 1067, 1146, 1160, 2138, 2181
Tru9I	TTAA	6 cut(s)	930, 1067, 1146, 1160, 2138, 2181
TseFI	GTSAC	4 cut(s)	73, 242, 554, 1888
TseI	GCWGC	8 cut(s)	380, 576, 653, 1312, 1517, 1947, 2240, 2745
Tsp45I	GTSAC	4 cut(s)	73, 242, 554, 1888
TspDTI	ATGAA	9 cut(s)	17, 576, 1187, 1322, 1754, 2414, 2456, 2546, 2637
TspGWI	ACGGA	2 cut(s)	115, 2421
VpaK11BI	GGWCC	2 cut(s)	2219, 2685
XagI	CCTNNNNNAGG	3 cut(s)	2064, 2226, 2347
XapI	RAATTY	4 cut(s)	178, 1054, 1625, 1741
XceI	RCATGY	3 cut(s)	1283, 2377, 2594
XmiI	GTMKAC	4 cut(s)	468, 480, 2378, 2481
XmnI	GAANNNNTTC	2 cut(s)	1103, 2501
ZraI	GACGTC	2 cut(s)	499, 2028
ZrmI	AGTACT	1 cut(s)	2582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.