Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

14675013 .. 14677477

Gene Structure 2465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g20470.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGCAAGGGGTTCTCACATTGAAGATGTACACACCAGAATCAGAACTCAAAAAAAAGTTTAAATCGCGGTGGAGCAACTTAACTGGCGCAAGGAGGGTGAATGGCTCTTCTTTTGGGTTAAATACGTATGGTCTATATGCCTATGATTCTGTATGGCTTCTTGCTCATGCCCTTGACTCATTTTTCGCTAGTGGAGGAAATATTTCTTTTGCAAATGACTCAAATTTGCACGAATTACGAGGAGGGAAGTTGAACCTTGATGCTCTAAACAAGTTTAATGGTGGCAGCCAGCTGCTCCAAAGCATTTTAGAGGTTAATACAACTGGATTAACCGGTCAAGTTAAGTTTAATCCAGATGGAAACTTGATTAATCCTGCATTTGAACTGATCAATGTGATTGGCACAGGGACTAGGACTATTGGTTATTGGTCCAACTCTTCTGGCCTGTCACTTGATCCACCAGATAAATCTCAAAGGAGGCTACATTCTAGGGGTTCCAGCACCGACACTCAACGATTATACAGCATTATCTGGCCCGGACAAACAACTCAGAAGCCTCGTGGGTGGGTTTTCCCTGACAACGGAAGAAAGCTCAGGATTGGAGTCCCCAATCGAGTTAGCTACCATCAGTTTGTAGGCGTAAAAGGCACTGATGAGTTCACTGGCTATTGCATTGAGGTCTTTCAAGCCGCCTTAAACGAGTTACCATATGGTGTCCCGTACCAGTTTGTACCTTTCGGGGATGGTAAACAAAACCCTGAAAACAGTGAACTTCTGCATAGGATCCAAATTGGTGAGTTTGATGGTGTGGTGGGAGATATTACAATCACCACTAGCAGAACAAAGATGGTGGATTTCACACAGCCGTACATTGAATCTGGTCTAGTTGTGGTTGCTCCAATTAGGAAGACGAACTCTAGTGCTTGGGCATTTTTGAGGCCTTTTACTCCAATGATGTGGGGTGTCACAGGCATTTTCTTCCTAGTTGTGGGAGCAGTTGTTTGGATTTTGGAGCGTCGGACTAACGAGGATTTTCGAGGCCATCCGAGGAAACAATTTGTCACAATTATTTGGTTTAGCTTTTCAACTCTGTTCTTCTCCCAAAAAGAAAAAACCGGCAGCACGCTTGGTCGATTTGTGCTTATCATATGGCTATTTGTGGTTCTAATACTCAACTCAAGCTACATTGCTAGCCTGACATCAATCCTTACTGTCGAGCAGCTTTCTTCACCTGTCAAAGGGATTGAAAGTCTGGCAAACAGCAATGATCACATTGGTTTCCTAAAGAATTCATTCGCTGAAAACTACTTAACTGATGAGCTAAACATACACAAGTCAAGACTTGTGCCTCTTAACTCCCCAGAAGAATATGAGAAGGCCTTGAAAGATGGTCCTAATGCAGGCGGTGTTGTTGCAGTGATTGATGAGCGTGCATACATGGAGCTCTTCCTCTCCGTTCGATGTGGATATAGTATCGTAGGTCAAGAATTCACCAAAATGGGCTGGGGTTTTGCCTTTCCAAGGGACTCCCCTCTTGCAATTGACATGTCAACCGCGGTGTTGAAACTATCGGAGAGGGGAGATCTTCAAAAGATTCATGACAAATGGCTGATGAAGAGTGCCTGCAGCGCAGAAGGAGCAAAGGAAGCCGTAGACCGCCTTCAAATGAGGAGCTTTTGGGGCCTCTTTCTGCTGAGCGGCATAGCTTGCTTTCTCGCTCTTGTTCTTCATGTTCTTCGCATGGTGCGCCAGTACTACAGGTTTCATGATTCCGACTGCGACAGTTCACAAGCAAGACGCCTTCGATCCTTCGTTTCGTTTGTAAATAAAAGGGAAGAGGAAGTGAAAAGAAGAACCAAGAGGAGGAGGACTGAGAAGGCTTCAAATAAAGTAGTGCATCGATCAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

637

Amino Acids

71.63

Weight (kDa)

9.51

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1698
AccI	GTMKAC	1 cut(s)	1653
AccII	CGCG	2 cut(s)	67, 1556
AciI	CCGC	7 cut(s)	67, 690, 1404, 1554, 1556, 1657, 1698
AclWI	GGATC	4 cut(s)	449, 778, 791, 1800
AcsI	RAATTY	3 cut(s)	223, 1288, 1487
AcyI	GRCGYC	1 cut(s)	1798
AfaI	GTAC	5 cut(s)	29, 722, 732, 869, 1754
AfiI	CCNNNNNNNGG	6 cut(s)	581, 988, 1238, 1400, 1521, 1863
AflIII	ACRYGT	1 cut(s)	1545
AgeI	ACCGGT	1 cut(s)	332
Alw21I	GWGCWC	1 cut(s)	1446
AlwI	GGATC	4 cut(s)	449, 778, 791, 1800
AoxI	GGCC	6 cut(s)	442, 533, 938, 1039, 1377, 1681
ApeKI	GCWGC	5 cut(s)	285, 292, 1119, 1219, 1626
ApoI	RAATTY	3 cut(s)	223, 1288, 1487
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
AseI	ATTAAT	1 cut(s)	369
AsiGI	ACCGGT	1 cut(s)	332
Asp700I	GAANNNNTTC	2 cut(s)	202, 1292
AspLEI	GCGC	3 cut(s)	89, 1631, 1749
AspS9I	GGNCC	4 cut(s)	429, 534, 1391, 1681
AsuC2I	CCSGG	1 cut(s)	537
AsuHPI	GGTGA	5 cut(s)	109, 806, 820, 1221, 1483
AsuNHI	GCTAGC	1 cut(s)	1190
AvaII	GGWCC	2 cut(s)	429, 1391
BamHI	GGATCC	1 cut(s)	783
BanII	GRGCYC	1 cut(s)	1446
BarI	GAAGNNNNNNTAC	2 cut(s)	1644, 1676
BauI	CACGAG	1 cut(s)	558
BbsI	GAAGAC	1 cut(s)	914
Bbv12I	GWGCWC	1 cut(s)	1446
BbvI	GCAGC	5 cut(s)	279, 297, 1131, 1231, 1638
BccI	CCATC	7 cut(s)	350, 633, 737, 797, 841, 1050, 1382
BceAI	ACGGC	2 cut(s)	850, 1634
BclI	TGATCA	2 cut(s)	387, 1267
BcnI	CCSGG	1 cut(s)	537
BfaI	CTAG	8 cut(s)	189, 411, 489, 834, 884, 918, 983, 1191
BfmI	CTRYAG	2 cut(s)	1624, 1756
BglII	AGATCT	1 cut(s)	1582
BisI	GCNGC	7 cut(s)	286, 293, 690, 1120, 1220, 1627, 1699
BlpI	GCTNAGC	1 cut(s)	1694
BlsI	GCNGC	7 cut(s)	287, 294, 691, 1121, 1221, 1628, 1700
BmcAI	AGTACT	1 cut(s)	1754
Bme1390I	CCNGG	1 cut(s)	537
Bme18I	GGWCC	2 cut(s)	429, 1391
BmgT120I	GGNCC	4 cut(s)	429, 534, 1391, 1681
BmiI	GGNNCC	3 cut(s)	496, 785, 1682
BmrFI	CCNGG	1 cut(s)	537
BmsI	GCATC	2 cut(s)	250, 1906
BmtI	GCTAGC	1 cut(s)	1194
BpiI	GAAGAC	1 cut(s)	914
Bpu10I	CCTNAGC	1 cut(s)	593
Bpu1102I	GCTNAGC	1 cut(s)	1694
BpuEI	CTTGAG	1 cut(s)	1162
BpuMI	CCSGG	1 cut(s)	537
Bsa29I	ATCGAT	1 cut(s)	1900
BsaAI	YACGTR	1 cut(s)	126
BsaHI	GRCGYC	1 cut(s)	1798
BsaJI	CCNNGG	3 cut(s)	1046, 1520, 1554
BsaWI	WCCGGW	1 cut(s)	332
BsaXI	ACNNNNNCTCC	2 cut(s)	984, 1014
Bsc4I	CCNNNNNNNGG	6 cut(s)	581, 988, 1238, 1400, 1521, 1863
Bse118I	RCCGGY	2 cut(s)	332, 1115
Bse1I	ACTGG	5 cut(s)	88, 328, 667, 724, 1750
Bse3DI	GCAATG	2 cut(s)	1185, 1270
BseCI	ATCGAT	1 cut(s)	1900
BseDI	CCNNGG	3 cut(s)	1046, 1520, 1554
BseGI	GGATG	2 cut(s)	748, 1042
BseLI	CCNNNNNNNGG	6 cut(s)	581, 988, 1238, 1400, 1521, 1863
BseMI	GCAATG	2 cut(s)	1185, 1270
BseMII	CTCAG	4 cut(s)	563, 607, 1685, 1863
BseNI	ACTGG	5 cut(s)	88, 328, 667, 724, 1750
BseRI	GAGGAG	4 cut(s)	255, 1684, 1876, 1879
BseXI	GCAGC	5 cut(s)	279, 297, 1131, 1231, 1638
BseYI	CCCAGC	1 cut(s)	1503
Bsh1236I	CGCG	2 cut(s)	67, 1556
BshFI	GGCC	6 cut(s)	444, 535, 940, 1041, 1379, 1683
BshTI	ACCGGT	1 cut(s)	332
BshVI	ATCGAT	1 cut(s)	1900
BsiHKAI	GWGCWC	1 cut(s)	1446
BsiSI	CCGG	3 cut(s)	333, 537, 1116
BslFI	GGGAC	4 cut(s)	421, 590, 701, 1538
BslI	CCNNNNNNNGG	6 cut(s)	581, 988, 1238, 1400, 1521, 1863
BsmFI	GGGAC	4 cut(s)	421, 590, 701, 1538
BsnI	GGCC	6 cut(s)	444, 535, 940, 1041, 1379, 1683
Bsp1286I	GDGCHC	1 cut(s)	1446
Bsp1407I	TGTACA	1 cut(s)	27
Bsp143I	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
Bsp1720I	GCTNAGC	1 cut(s)	1694
BspACI	CCGC	7 cut(s)	67, 690, 1404, 1554, 1556, 1657, 1698
BspANI	GGCC	6 cut(s)	444, 535, 940, 1041, 1379, 1683
BspCNI	CTCAG	4 cut(s)	562, 606, 1686, 1864
BspDI	ATCGAT	1 cut(s)	1900
BspFNI	CGCG	2 cut(s)	67, 1556
BspHI	TCATGA	2 cut(s)	1597, 1765
BspLI	GGNNCC	3 cut(s)	496, 785, 1682
BspMAI	CTGCAG	1 cut(s)	1628
BspOI	GCTAGC	1 cut(s)	1194
BspPI	GGATC	4 cut(s)	449, 778, 791, 1800
BspQI	GCTCTTC	2 cut(s)	112, 1451
BsrBI	CCGCTC	1 cut(s)	1698
BsrDI	GCAATG	2 cut(s)	1185, 1270
BsrFI	RCCGGY	2 cut(s)	332, 1115
BsrGI	TGTACA	1 cut(s)	27
BsrI	ACTGG	5 cut(s)	88, 328, 667, 724, 1750
BssAI	RCCGGY	2 cut(s)	332, 1115
BssECI	CCNNGG	3 cut(s)	1046, 1520, 1554
BssMI	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
BssNI	GRCGYC	1 cut(s)	1798
BssSI	CACGAG	1 cut(s)	558
BssT1I	CCWWGG	1 cut(s)	1520
Bst2BI	CACGAG	1 cut(s)	558
Bst4CI	ACNGT	3 cut(s)	767, 1213, 1784
Bst6I	CTCTTC	5 cut(s)	112, 442, 1451, 1610, 1830
BstACI	GRCGYC	1 cut(s)	1798
BstAPI	GCANNNNNTGC	1 cut(s)	1707
BstAUI	TGTACA	1 cut(s)	27
BstBAI	YACGTR	1 cut(s)	126
BstC8I	GCNNGC	7 cut(s)	290, 1124, 1192, 1402, 1431, 1624, 1708
BstDEI	CTNAG	4 cut(s)	549, 593, 1694, 1872
BstDSI	CCRYGG	1 cut(s)	1554
BstENI	CCTNNNNNAGG	3 cut(s)	1236, 1398, 1519
BstF5I	GGATG	2 cut(s)	748, 1042
BstFNI	CGCG	2 cut(s)	67, 1556
BstHHI	GCGC	3 cut(s)	89, 1631, 1749
BstKTI	GATC	7 cut(s)	390, 457, 786, 1270, 1585, 1808, 1904
BstMBI	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
BstMWI	GCNNNNNNNGC	7 cut(s)	645, 1628, 1637, 1646, 1680, 1707, 1746
BstNSI	RCATGY	1 cut(s)	1549
BstSCI	CCNGG	1 cut(s)	535
BstSFI	CTRYAG	2 cut(s)	1624, 1756
BstSNI	TACGTA	1 cut(s)	126
BstUI	CGCG	2 cut(s)	67, 1556
BstV1I	GCAGC	5 cut(s)	279, 297, 1131, 1231, 1638
BstV2I	GAAGAC	1 cut(s)	914
BstX2I	RGATCY	2 cut(s)	783, 1582
BstXI	CCANNNNNNTGG	1 cut(s)	957
BstYI	RGATCY	2 cut(s)	783, 1582
Bsu15I	ATCGAT	1 cut(s)	1900
BsuRI	GGCC	6 cut(s)	444, 535, 940, 1041, 1379, 1683
BsuTUI	ATCGAT	1 cut(s)	1900
BtgI	CCRYGG	1 cut(s)	1554
BtsCI	GGATG	2 cut(s)	748, 1042
BtsI	GCAGTG	1 cut(s)	1422
BtsIMutI	CAGTG	4 cut(s)	648, 660, 772, 1422
Cac8I	GCNNGC	7 cut(s)	290, 1124, 1192, 1402, 1431, 1624, 1708
CciI	TCATGA	2 cut(s)	1597, 1765
CfoI	GCGC	3 cut(s)	89, 1631, 1749
Cfr10I	RCCGGY	2 cut(s)	332, 1115
Cfr13I	GGNCC	4 cut(s)	429, 534, 1391, 1681
Cfr42I	CCGCGG	1 cut(s)	1557
ClaI	ATCGAT	1 cut(s)	1900
CseI	GACGC	2 cut(s)	1004, 1806
Csp6I	GTAC	5 cut(s)	28, 721, 731, 868, 1753
CspAI	ACCGGT	1 cut(s)	332
CspCI	CAANNNNNGTGG	2 cut(s)	831, 866
CviAII	CATG	7 cut(s)	167, 1438, 1546, 1598, 1730, 1741, 1766
CviQI	GTAC	5 cut(s)	28, 721, 731, 868, 1753
DdeI	CTNAG	4 cut(s)	549, 593, 1694, 1872
DpnI	GATC	7 cut(s)	389, 456, 785, 1269, 1584, 1807, 1903
DpnII	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
DraI	TTTAAA	1 cut(s)	61
Eam1104I	CTCTTC	5 cut(s)	112, 442, 1451, 1610, 1830
EarI	CTCTTC	5 cut(s)	112, 442, 1451, 1610, 1830
Ecl136II	GAGCTC	1 cut(s)	1444
Eco105I	TACGTA	1 cut(s)	126
Eco130I	CCWWGG	1 cut(s)	1520
Eco147I	AGGCCT	2 cut(s)	940, 1379
Eco24I	GRGCYC	1 cut(s)	1446
Eco47I	GGWCC	2 cut(s)	429, 1391
Eco53kI	GAGCTC	1 cut(s)	1444
EcoICRI	GAGCTC	1 cut(s)	1444
EcoNI	CCTNNNNNAGG	3 cut(s)	1236, 1398, 1519
EcoO109I	RGGNCCY	1 cut(s)	1681
EcoRI	GAATTC	2 cut(s)	1288, 1487
EcoT14I	CCWWGG	1 cut(s)	1520
EcoT38I	GRGCYC	1 cut(s)	1446
ErhI	CCWWGG	1 cut(s)	1520
FaeI	CATG	7 cut(s)	170, 1441, 1549, 1601, 1733, 1744, 1769
FaqI	GGGAC	4 cut(s)	421, 590, 701, 1538
FatI	CATG	7 cut(s)	166, 1437, 1545, 1597, 1729, 1740, 1765
FauNDI	CATATG	2 cut(s)	709, 1148
FbaI	TGATCA	2 cut(s)	387, 1267
FblI	GTMKAC	1 cut(s)	1653
Fnu4HI	GCNGC	7 cut(s)	286, 293, 690, 1120, 1220, 1627, 1699
FokI	GGATG	2 cut(s)	755, 1029
FriOI	GRGCYC	1 cut(s)	1446
Fsp4HI	GCNGC	7 cut(s)	286, 293, 690, 1120, 1220, 1627, 1699
FspBI	CTAG	8 cut(s)	189, 411, 489, 834, 884, 918, 983, 1191
GlaI	GCGC	3 cut(s)	88, 1630, 1748
GluI	GCNGC	7 cut(s)	286, 293, 690, 1120, 1220, 1627, 1699
GsaI	CCCAGC	1 cut(s)	1507
HaeIII	GGCC	6 cut(s)	444, 535, 940, 1041, 1379, 1683
HapII	CCGG	3 cut(s)	333, 537, 1116
HgaI	GACGC	2 cut(s)	1004, 1806
HhaI	GCGC	3 cut(s)	89, 1631, 1749
Hin1I	GRCGYC	1 cut(s)	1798
Hin1II	CATG	7 cut(s)	170, 1441, 1549, 1601, 1733, 1744, 1769
Hin6I	GCGC	3 cut(s)	87, 1629, 1747
HinP1I	GCGC	3 cut(s)	87, 1629, 1747
HincII	GTYRAC	1 cut(s)	1551
HindII	GTYRAC	1 cut(s)	1551
HinfI	GANTC	9 cut(s)	38, 146, 176, 218, 603, 875, 1526, 1594, 1769
HpaII	CCGG	3 cut(s)	333, 537, 1116
HphI	GGTGA	5 cut(s)	109, 806, 820, 1221, 1483
Hpy166II	GTNNAC	7 cut(s)	30, 660, 749, 770, 1551, 1654, 1787
Hpy188I	TCNGA	6 cut(s)	43, 552, 1020, 1047, 1573, 1774
Hpy188III	TCNNGA	6 cut(s)	353, 595, 1338, 1484, 1598, 1766
Hpy8I	GTNNAC	7 cut(s)	30, 660, 749, 770, 1551, 1654, 1787
Hpy99I	CGWCG	1 cut(s)	1020
HpyAV	CCTTC	6 cut(s)	1369, 1628, 1670, 1811, 1819, 1870
HpyCH4III	ACNGT	3 cut(s)	767, 1213, 1784
HpyCH4IV	ACGT	1 cut(s)	125
HpyF10VI	GCNNNNNNNGC	7 cut(s)	645, 1628, 1637, 1646, 1680, 1707, 1746
HpyF3I	CTNAG	4 cut(s)	549, 593, 1694, 1872
HpySE526I	ACGT	1 cut(s)	125
Hsp92I	GRCGYC	1 cut(s)	1798
Hsp92II	CATG	7 cut(s)	170, 1441, 1549, 1601, 1733, 1744, 1769
HspAI	GCGC	3 cut(s)	87, 1629, 1747
Ksp22I	TGATCA	2 cut(s)	387, 1267
KspI	CCGCGG	1 cut(s)	1557
Kzo9I	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
LguI	GCTCTTC	2 cut(s)	112, 1451
LmnI	GCTCC	8 cut(s)	72, 300, 901, 992, 1012, 1441, 1637, 1671
Lsp1109I	GCAGC	5 cut(s)	279, 297, 1131, 1231, 1638
LweI	GCATC	2 cut(s)	250, 1906
MaeI	CTAG	8 cut(s)	189, 411, 489, 834, 884, 918, 983, 1191
MaeII	ACGT	1 cut(s)	125
MaeIII	GTNAC	4 cut(s)	447, 702, 964, 1060
MalI	GATC	7 cut(s)	389, 456, 785, 1269, 1584, 1807, 1903
MbiI	CCGCTC	1 cut(s)	1698
MboI	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	2 cut(s)	783, 1582
MhlI	GDGCHC	1 cut(s)	1446
MluCI	AATT	9 cut(s)	223, 233, 789, 900, 1055, 1065, 1288, 1487, 1539
MlyI	GAGTC	4 cut(s)	170, 212, 612, 1520
MmeI	TCCRAC	3 cut(s)	456, 998, 1797
MroXI	GAANNNNTTC	2 cut(s)	202, 1292
MslI	CAYNNNNRTG	1 cut(s)	1496
MspA1I	CMGCKG	2 cut(s)	292, 1556
MspI	CCGG	3 cut(s)	333, 537, 1116
MspR9I	CCNGG	1 cut(s)	537
MunI	CAATTG	1 cut(s)	1539
MvnI	CGCG	2 cut(s)	67, 1556
MwoI	GCNNNNNNNGC	7 cut(s)	645, 1628, 1637, 1646, 1680, 1707, 1746
NciI	CCSGG	1 cut(s)	537
NdeI	CATATG	2 cut(s)	709, 1148
NdeII	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
NheI	GCTAGC	1 cut(s)	1190
NlaIII	CATG	7 cut(s)	170, 1441, 1549, 1601, 1733, 1744, 1769
NlaIV	GGNNCC	3 cut(s)	496, 785, 1682
NmuCI	GTSAC	3 cut(s)	447, 964, 1060
NspI	RCATGY	1 cut(s)	1549
PagI	TCATGA	2 cut(s)	1597, 1765
PceI	AGGCCT	2 cut(s)	940, 1379
PciI	ACATGT	1 cut(s)	1545
PciSI	GCTCTTC	2 cut(s)	112, 1451
PdmI	GAANNNNTTC	2 cut(s)	202, 1292
PfeI	GAWTC	5 cut(s)	38, 146, 875, 1594, 1769
PinAI	ACCGGT	1 cut(s)	332
PkrI	GCNGC	7 cut(s)	287, 294, 691, 1121, 1221, 1628, 1700
PleI	GAGTC	4 cut(s)	170, 212, 611, 1520
PpsI	GAGTC	4 cut(s)	170, 212, 611, 1520
Ppu21I	YACGTR	1 cut(s)	126
PscI	ACATGT	1 cut(s)	1545
PshBI	ATTAAT	1 cut(s)	369
Psp124BI	GAGCTC	1 cut(s)	1446
PspFI	CCCAGC	1 cut(s)	1503
PspN4I	GGNNCC	3 cut(s)	496, 785, 1682
PspPI	GGNCC	4 cut(s)	429, 534, 1391, 1681
PstI	CTGCAG	1 cut(s)	1628
PsuI	RGATCY	2 cut(s)	783, 1582
PvuII	CAGCTG	1 cut(s)	292
RsaI	GTAC	5 cut(s)	29, 722, 732, 869, 1754
RsaNI	GTAC	5 cut(s)	28, 721, 731, 868, 1753
RseI	CAYNNNNRTG	1 cut(s)	1496
SacI	GAGCTC	1 cut(s)	1446
SacII	CCGCGG	1 cut(s)	1557
SapI	GCTCTTC	2 cut(s)	112, 1451
SatI	GCNGC	7 cut(s)	286, 293, 690, 1120, 1220, 1627, 1699
Sau3AI	GATC	7 cut(s)	387, 454, 783, 1267, 1582, 1805, 1901
Sau96I	GGNCC	4 cut(s)	429, 534, 1391, 1681
ScaI	AGTACT	1 cut(s)	1754
SchI	GAGTC	4 cut(s)	170, 212, 612, 1520
ScrFI	CCNGG	1 cut(s)	537
SduI	GDGCHC	1 cut(s)	1446
SfaNI	GCATC	2 cut(s)	250, 1906
SfcI	CTRYAG	2 cut(s)	1624, 1756
Sfr303I	CCGCGG	1 cut(s)	1557
SgrBI	CCGCGG	1 cut(s)	1557
SinI	GGWCC	2 cut(s)	429, 1391
SmiMI	CAYNNNNRTG	1 cut(s)	1496
SmlI	CTYRAG	1 cut(s)	1177
SmoI	CTYRAG	1 cut(s)	1177
SnaBI	TACGTA	1 cut(s)	126
Sse9I	AATT	9 cut(s)	223, 233, 789, 900, 1055, 1065, 1288, 1487, 1539
SseBI	AGGCCT	2 cut(s)	940, 1379
SsiI	CCGC	7 cut(s)	67, 690, 1404, 1554, 1556, 1657, 1698
SspI	AATATT	1 cut(s)	202
SspMI	CTAG	8 cut(s)	189, 411, 489, 834, 884, 918, 983, 1191
SstI	GAGCTC	1 cut(s)	1446
StuI	AGGCCT	2 cut(s)	940, 1379
StyD4I	CCNGG	1 cut(s)	535
StyI	CCWWGG	1 cut(s)	1520
TaaI	ACNGT	3 cut(s)	767, 1213, 1784
TaiI	ACGT	1 cut(s)	128
TaqI	TCGA	7 cut(s)	613, 1036, 1132, 1215, 1459, 1804, 1900
TasI	AATT	9 cut(s)	223, 233, 789, 900, 1055, 1065, 1288, 1487, 1539
TatI	WGTACW	2 cut(s)	27, 1752
TauI	GCSGC	2 cut(s)	692, 1701
TfiI	GAWTC	5 cut(s)	38, 146, 875, 1594, 1769
TscAI	CASTG	4 cut(s)	655, 667, 772, 1422
TseFI	GTSAC	3 cut(s)	447, 964, 1060
TseI	GCWGC	5 cut(s)	285, 292, 1119, 1219, 1626
Tsp45I	GTSAC	3 cut(s)	447, 964, 1060
TspDTI	ATGAA	5 cut(s)	1281, 1586, 1628, 1718, 1754
TspGWI	ACGGA	2 cut(s)	597, 1444
TspRI	CASTG	4 cut(s)	655, 667, 772, 1422
VpaK11BI	GGWCC	2 cut(s)	429, 1391
VspI	ATTAAT	1 cut(s)	369
XagI	CCTNNNNNAGG	3 cut(s)	1236, 1398, 1519
XapI	RAATTY	3 cut(s)	223, 1288, 1487
XceI	RCATGY	1 cut(s)	1549
XmiI	GTMKAC	1 cut(s)	1653
XmnI	GAANNNNTTC	2 cut(s)	202, 1292
XspI	CTAG	8 cut(s)	189, 411, 489, 834, 884, 918, 983, 1191
ZrmI	AGTACT	1 cut(s)	1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.