Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

18808196 .. 18810486

Gene Structure 2291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1229500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGTTTAATGGTGGCAGCCAGCTGCTCCAAAGCATTTTAGAGGTTAATACAACTGGATTAACCGGGCAAATTAAGTTTACTCCAGACGGAAATTTGATTAATCCTGCATTTGAAGTGATCAATGTGATCGGCACAGGGACTAGGACTATTGGTTATTGGTCCAATTCTTCTGGCCTGTCGCTTGATCCACCTGATAACGTCATCTGGCCCGGACAAACAACTCAGAAGCCTCGCGGGTGGGTTTTCCCCGACAACGGAAGAAAGCTCAGGATTGGAGTCCCCGATCGAGGTACCTTCCGCGAATTTGTAGGCGTAAAAGGCACTGAGTTCACTGGCTATTGCATTGAGGTCTTTCAAGCCGCCTTAAATGAGTTACCATATGGTGTCCCATACAAGTTTGTAGCTTTCGGGGATGGTATAACAAACGCTGAAAGTAAGGAACTTCTGCACAGGGTCCAAATTGGTGAGTTGGATGGTGTGGTGGGAGATATTACAATCACCACTAGCAGAACAAAGATGGTGGATTTCACACAGCCATACATTGAGTCTGGTCTAGTTGTGGTTGCTCCAATTAGGAAGACGAACTCTAGTGCTTGGGCATTTTTGAGGCCTTTTAGTCCAATGATGTGGGGTGTCACAGGCATTTTCTTCCTAGTTGTGGGAGCAGTTGTTTGGATTTTGGAGCGTCGGACCAACGAGGATTTTCGAGGCCGTCCGAGAAGACAATTTGTCACAATTATTTGGTTTAGCTTTTCAACTCTGTTCTTCTCCCAGAATGAAAAAACCGGCAGCACGCTTGGTCGATTTGTGCTTATCATATGGCTATTTGTGGTTCTAATAATCAACTCAAGCTACATTGCTAGACTGACATCAATCCTCACTGTCGAGCAGCTTTCTTCACCTGTTAAAGGGATTGAAAGTCTGGTAAACGGCAATGATCCCATTGGTTTCCCAAGGGGTTCGTTCGCTGAAAACTACTTAACCGATGAGCTGAACATACACAAGTCAAGACTTGTGCCTCTTAACTCCCCAGAAGAATATGAGAAGGCCTTGAAAGATGGTCCTAGTGCAGGCGGTGTTGCTGCTGTGATTGATGAGCGTGCATACATGGAGCTCTTCCTCTCCGTTCGATGTGGATATAGTATAGTAGGTCAAGAATTCACCAAAATGGGATGGGGTTTCGCCTTTCCAAGGGACTCGCCTCTTGCAATTGACATGTCAACTGCGGTGTTGAAACTATCGGAGAAGGGAGATCTTCAAAAGATTCATGACAAATGGCTGAAGAAAAGTGCTTGCAGTGCAGAAGGAGCAAAGCAAGCCGTAGACCGTCTTTCGTTGAGTAGCTTTTGGGGCCTCTTTCTGCTGAGCGGCATAGCTTGCTTTCTGGCTCTTGTTCTTCATGTTCTTCGCATGGTGCACCAGTACTACAGGCATTATGATTCCGACTGCGAGAGCTCACAAGCGAAAAGCCTTCGATCCTTCATCTCGTTTGTAAATAAAAGGGAAGAGGAAGTGAAAAGCAGAACCAACAGGAGGACTGAGAAGGCTTCAAATAAAATAGTGCATGATCAAGATAGTAGTTCCATTGATGGTTTGAGTCAAAGTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

537

Amino Acids

59.69

Weight (kDa)

8.42

Isoelectric Point (pI)

40.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 44	1.4e-07	Receptor family ligand binding region
SBP_bac_3	PF00497	101 - 428	8.7e-13	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	108 - 189	6.1e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	208 - 460	1.8e-34	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	290
AccB1I	GGYRCC	1 cut(s)	290
AccBSI	CCGCTC	1 cut(s)	1368
AccI	GTMKAC	1 cut(s)	1323
AccII	CGCG	2 cut(s)	234, 300
AciI	CCGC	6 cut(s)	234, 298, 360, 1074, 1226, 1368
AclWI	GGATC	3 cut(s)	179, 932, 1470
AcsI	RAATTY	3 cut(s)	91, 302, 1157
AcuI	CTGAAG	1 cut(s)	1301
AfaI	GTAC	2 cut(s)	292, 1424
AfiI	CCNNNNNNNGG	7 cut(s)	254, 287, 658, 908, 1070, 1191, 1533
AflIII	ACRYGT	1 cut(s)	1215
AgsI	TTSAA	8 cut(s)	113, 356, 756, 917, 1054, 1234, 1259, 1551
AhdI	GACNNNNNGTC	1 cut(s)	728
Alw21I	GWGCWC	3 cut(s)	1116, 1419, 1457
Alw44I	GTGCAC	1 cut(s)	1415
AlwI	GGATC	3 cut(s)	179, 932, 1470
AoxI	GGCC	6 cut(s)	172, 206, 608, 709, 1047, 1351
ApaLI	GTGCAC	1 cut(s)	1415
ApeKI	GCWGC	5 cut(s)	15, 22, 789, 889, 1082
ApoI	RAATTY	3 cut(s)	91, 302, 1157
AseI	ATTAAT	1 cut(s)	99
Asp718I	GGTACC	1 cut(s)	290
AspS9I	GGNCC	6 cut(s)	159, 207, 454, 690, 1061, 1351
AsuC2I	CCSGG	2 cut(s)	64, 210
AsuHPI	GGTGA	4 cut(s)	476, 490, 891, 1153
AvaII	GGWCC	4 cut(s)	159, 454, 690, 1061
BaeGI	GKGCMC	1 cut(s)	1419
BanI	GGYRCC	1 cut(s)	290
BanII	GRGCYC	2 cut(s)	1116, 1457
BbsI	GAAGAC	2 cut(s)	584, 727
Bbv12I	GWGCWC	3 cut(s)	1116, 1419, 1457
BbvI	GCAGC	5 cut(s)	9, 27, 801, 901, 1069
BccI	CCATC	6 cut(s)	407, 467, 511, 1052, 1167, 1583
BceAI	ACGGC	3 cut(s)	696, 946, 1304
BclI	TGATCA	2 cut(s)	117, 1567
BcnI	CCSGG	2 cut(s)	64, 210
BfaI	CTAG	7 cut(s)	141, 504, 554, 588, 653, 861, 1065
BfmI	CTRYAG	1 cut(s)	1426
BglII	AGATCT	1 cut(s)	1252
BisI	GCNGC	7 cut(s)	16, 23, 360, 790, 890, 1083, 1369
BlpI	GCTNAGC	1 cut(s)	1364
BlsI	GCNGC	7 cut(s)	17, 24, 361, 791, 891, 1084, 1370
BmcAI	AGTACT	1 cut(s)	1424
Bme1390I	CCNGG	2 cut(s)	64, 210
Bme18I	GGWCC	4 cut(s)	159, 454, 690, 1061
BmeRI	GACNNNNNGTC	1 cut(s)	728
BmgT120I	GGNCC	6 cut(s)	159, 207, 454, 690, 1061, 1351
BmiI	GGNNCC	3 cut(s)	292, 455, 1352
BmrFI	CCNGG	2 cut(s)	64, 210
BpiI	GAAGAC	2 cut(s)	584, 727
BpmI	CTGGAG	1 cut(s)	66
Bpu10I	CCTNAGC	1 cut(s)	266
Bpu1102I	GCTNAGC	1 cut(s)	1364
BpuEI	CTTGAG	1 cut(s)	832
BpuMI	CCSGG	2 cut(s)	64, 210
BsaJI	CCNNGG	2 cut(s)	953, 1190
BsaXI	ACNNNNNCTCC	2 cut(s)	654, 684
Bsc4I	CCNNNNNNNGG	7 cut(s)	254, 287, 658, 908, 1070, 1191, 1533
Bse118I	RCCGGY	1 cut(s)	785
Bse1I	ACTGG	3 cut(s)	58, 337, 1420
Bse3DI	GCAATG	2 cut(s)	855, 940
BseDI	CCNNGG	2 cut(s)	953, 1190
BseGI	GGATG	3 cut(s)	418, 478, 1178
BseLI	CCNNNNNNNGG	7 cut(s)	254, 287, 658, 908, 1070, 1191, 1533
BseMI	GCAATG	2 cut(s)	855, 940
BseMII	CTCAG	5 cut(s)	236, 280, 315, 1355, 1530
BseNI	ACTGG	3 cut(s)	58, 337, 1420
BseSI	GKGCMC	1 cut(s)	1419
BseXI	GCAGC	5 cut(s)	9, 27, 801, 901, 1069
BsgI	GTGCAG	3 cut(s)	431, 1089, 1320
Bsh1236I	CGCG	2 cut(s)	234, 300
Bsh1285I	CGRYCG	1 cut(s)	286
BshFI	GGCC	6 cut(s)	174, 208, 610, 711, 1049, 1353
BshNI	GGYRCC	1 cut(s)	290
BsiEI	CGRYCG	1 cut(s)	286
BsiHKAI	GWGCWC	3 cut(s)	1116, 1419, 1457
BsiSI	CCGG	3 cut(s)	63, 210, 786
BslFI	GGGAC	4 cut(s)	151, 263, 371, 1208
BslI	CCNNNNNNNGG	7 cut(s)	254, 287, 658, 908, 1070, 1191, 1533
BsmFI	GGGAC	4 cut(s)	151, 263, 371, 1208
BsnI	GGCC	6 cut(s)	174, 208, 610, 711, 1049, 1353
Bsp1286I	GDGCHC	3 cut(s)	1116, 1419, 1457
Bsp143I	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
Bsp1720I	GCTNAGC	1 cut(s)	1364
BspACI	CCGC	6 cut(s)	234, 298, 360, 1074, 1226, 1368
BspANI	GGCC	6 cut(s)	174, 208, 610, 711, 1049, 1353
BspCNI	CTCAG	5 cut(s)	235, 279, 316, 1356, 1531
BspFNI	CGCG	2 cut(s)	234, 300
BspHI	TCATGA	1 cut(s)	1267
BspLI	GGNNCC	3 cut(s)	292, 455, 1352
BspPI	GGATC	3 cut(s)	179, 932, 1470
BspQI	GCTCTTC	1 cut(s)	1121
BspT107I	GGYRCC	1 cut(s)	290
BsrBI	CCGCTC	1 cut(s)	1368
BsrDI	GCAATG	2 cut(s)	855, 940
BsrFI	RCCGGY	1 cut(s)	785
BsrI	ACTGG	3 cut(s)	58, 337, 1420
BssAI	RCCGGY	1 cut(s)	785
BssECI	CCNNGG	2 cut(s)	953, 1190
BssMI	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
BssT1I	CCWWGG	2 cut(s)	953, 1190
Bst4CI	ACNGT	2 cut(s)	883, 1328
Bst6I	CTCTTC	2 cut(s)	1121, 1500
BstAPI	GCANNNNNTGC	1 cut(s)	1377
BstC8I	GCNNGC	7 cut(s)	20, 794, 1072, 1101, 1294, 1317, 1378
BstDEI	CTNAG	5 cut(s)	222, 266, 324, 1364, 1539
BstENI	CCTNNNNNAGG	3 cut(s)	906, 1068, 1189
BstF5I	GGATG	3 cut(s)	418, 478, 1178
BstFNI	CGCG	2 cut(s)	234, 300
BstKTI	GATC	8 cut(s)	120, 129, 187, 286, 940, 1255, 1478, 1570
BstMBI	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
BstMCI	CGRYCG	1 cut(s)	286
BstMWI	GCNNNNNNNGC	6 cut(s)	318, 1298, 1307, 1316, 1350, 1377
BstNSI	RCATGY	1 cut(s)	1219
BstSCI	CCNGG	2 cut(s)	62, 208
BstSFI	CTRYAG	1 cut(s)	1426
BstSLI	GKGCMC	1 cut(s)	1419
BstUI	CGCG	2 cut(s)	234, 300
BstV1I	GCAGC	5 cut(s)	9, 27, 801, 901, 1069
BstV2I	GAAGAC	2 cut(s)	584, 727
BstX2I	RGATCY	1 cut(s)	1252
BstXI	CCANNNNNNTGG	1 cut(s)	627
BstYI	RGATCY	1 cut(s)	1252
BsuRI	GGCC	6 cut(s)	174, 208, 610, 711, 1049, 1353
BtsCI	GGATG	3 cut(s)	418, 478, 1178
BtsI	GCAGTG	1 cut(s)	1303
BtsIMutI	CAGTG	4 cut(s)	321, 330, 879, 1303
Cac8I	GCNNGC	7 cut(s)	20, 794, 1072, 1101, 1294, 1317, 1378
CciI	TCATGA	1 cut(s)	1267
Cfr10I	RCCGGY	1 cut(s)	785
Cfr13I	GGNCC	6 cut(s)	159, 207, 454, 690, 1061, 1351
CseI	GACGC	1 cut(s)	674
Csp6I	GTAC	2 cut(s)	291, 1423
CspCI	CAANNNNNGTGG	2 cut(s)	501, 536
CviAII	CATG	6 cut(s)	1108, 1216, 1268, 1400, 1411, 1565
CviQI	GTAC	2 cut(s)	291, 1423
DdeI	CTNAG	5 cut(s)	222, 266, 324, 1364, 1539
DpnI	GATC	8 cut(s)	119, 128, 186, 285, 939, 1254, 1477, 1569
DpnII	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
DriI	GACNNNNNGTC	1 cut(s)	728
Eam1104I	CTCTTC	2 cut(s)	1121, 1500
Eam1105I	GACNNNNNGTC	1 cut(s)	728
EarI	CTCTTC	2 cut(s)	1121, 1500
Ecl136II	GAGCTC	2 cut(s)	1114, 1455
Eco130I	CCWWGG	2 cut(s)	953, 1190
Eco147I	AGGCCT	2 cut(s)	610, 1049
Eco24I	GRGCYC	2 cut(s)	1116, 1457
Eco47I	GGWCC	4 cut(s)	159, 454, 690, 1061
Eco53kI	GAGCTC	2 cut(s)	1114, 1455
Eco57I	CTGAAG	1 cut(s)	1301
EcoICRI	GAGCTC	2 cut(s)	1114, 1455
EcoNI	CCTNNNNNAGG	3 cut(s)	906, 1068, 1189
EcoO109I	RGGNCCY	1 cut(s)	1351
EcoRI	GAATTC	1 cut(s)	1157
EcoT14I	CCWWGG	2 cut(s)	953, 1190
EcoT38I	GRGCYC	2 cut(s)	1116, 1457
ErhI	CCWWGG	2 cut(s)	953, 1190
FaeI	CATG	6 cut(s)	1111, 1219, 1271, 1403, 1414, 1568
FaqI	GGGAC	4 cut(s)	151, 263, 371, 1208
FatI	CATG	6 cut(s)	1107, 1215, 1267, 1399, 1410, 1564
FauI	CCCGC	1 cut(s)	227
FauNDI	CATATG	2 cut(s)	379, 818
FbaI	TGATCA	2 cut(s)	117, 1567
FblI	GTMKAC	1 cut(s)	1323
Fnu4HI	GCNGC	7 cut(s)	16, 23, 360, 790, 890, 1083, 1369
FokI	GGATG	3 cut(s)	425, 485, 1185
FriOI	GRGCYC	2 cut(s)	1116, 1457
Fsp4HI	GCNGC	7 cut(s)	16, 23, 360, 790, 890, 1083, 1369
FspBI	CTAG	7 cut(s)	141, 504, 554, 588, 653, 861, 1065
GluI	GCNGC	7 cut(s)	16, 23, 360, 790, 890, 1083, 1369
GsuI	CTGGAG	1 cut(s)	66
HaeIII	GGCC	6 cut(s)	174, 208, 610, 711, 1049, 1353
HapII	CCGG	3 cut(s)	63, 210, 786
HgaI	GACGC	1 cut(s)	674
Hin1II	CATG	6 cut(s)	1111, 1219, 1271, 1403, 1414, 1568
HincII	GTYRAC	1 cut(s)	1221
HindII	GTYRAC	1 cut(s)	1221
HinfI	GANTC	6 cut(s)	276, 545, 1196, 1264, 1439, 1597
HpaII	CCGG	3 cut(s)	63, 210, 786
HphI	GGTGA	4 cut(s)	476, 490, 891, 1153
Hpy166II	GTNNAC	6 cut(s)	78, 330, 928, 1221, 1324, 1417
Hpy188I	TCNGA	5 cut(s)	225, 690, 717, 1243, 1444
Hpy188III	TCNNGA	6 cut(s)	83, 268, 1008, 1154, 1268, 1571
Hpy8I	GTNNAC	6 cut(s)	78, 330, 928, 1221, 1324, 1417
Hpy99I	CGWCG	1 cut(s)	690
HpyAV	CCTTC	7 cut(s)	304, 1039, 1240, 1298, 1481, 1489, 1537
HpyCH4III	ACNGT	2 cut(s)	883, 1328
HpyCH4IV	ACGT	1 cut(s)	198
HpyF10VI	GCNNNNNNNGC	6 cut(s)	318, 1298, 1307, 1316, 1350, 1377
HpyF3I	CTNAG	5 cut(s)	222, 266, 324, 1364, 1539
HpySE526I	ACGT	1 cut(s)	198
Hsp92II	CATG	6 cut(s)	1111, 1219, 1271, 1403, 1414, 1568
KpnI	GGTACC	1 cut(s)	294
Ksp22I	TGATCA	2 cut(s)	117, 1567
Kzo9I	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
LguI	GCTCTTC	1 cut(s)	1121
LmnI	GCTCC	6 cut(s)	30, 571, 662, 682, 1111, 1307
Lsp1109I	GCAGC	5 cut(s)	9, 27, 801, 901, 1069
MaeI	CTAG	7 cut(s)	141, 504, 554, 588, 653, 861, 1065
MaeII	ACGT	1 cut(s)	198
MaeIII	GTNAC	3 cut(s)	372, 634, 730
MalI	GATC	8 cut(s)	119, 128, 186, 285, 939, 1254, 1477, 1569
MbiI	CCGCTC	1 cut(s)	1368
MboI	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	1 cut(s)	1252
MhlI	GDGCHC	3 cut(s)	1116, 1419, 1457
MlyI	GAGTC	4 cut(s)	285, 554, 1190, 1606
MmeI	TCCRAC	3 cut(s)	450, 668, 1467
MslI	CAYNNNNRTG	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	22
MspI	CCGG	3 cut(s)	63, 210, 786
MspR9I	CCNGG	2 cut(s)	64, 210
MunI	CAATTG	1 cut(s)	1209
MvnI	CGCG	2 cut(s)	234, 300
MwoI	GCNNNNNNNGC	6 cut(s)	318, 1298, 1307, 1316, 1350, 1377
NciI	CCSGG	2 cut(s)	64, 210
NdeI	CATATG	2 cut(s)	379, 818
NdeII	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
NlaIII	CATG	6 cut(s)	1111, 1219, 1271, 1403, 1414, 1568
NlaIV	GGNNCC	3 cut(s)	292, 455, 1352
NmuCI	GTSAC	2 cut(s)	634, 730
NspI	RCATGY	1 cut(s)	1219
PagI	TCATGA	1 cut(s)	1267
PceI	AGGCCT	2 cut(s)	610, 1049
PciI	ACATGT	1 cut(s)	1215
PciSI	GCTCTTC	1 cut(s)	1121
PfeI	GAWTC	2 cut(s)	1264, 1439
PkrI	GCNGC	7 cut(s)	17, 24, 361, 791, 891, 1084, 1370
Ple19I	CGATCG	1 cut(s)	286
PleI	GAGTC	4 cut(s)	284, 553, 1190, 1605
PpsI	GAGTC	4 cut(s)	284, 553, 1190, 1605
PscI	ACATGT	1 cut(s)	1215
PshBI	ATTAAT	1 cut(s)	99
Psp124BI	GAGCTC	2 cut(s)	1116, 1457
PspN4I	GGNNCC	3 cut(s)	292, 455, 1352
PspPI	GGNCC	6 cut(s)	159, 207, 454, 690, 1061, 1351
PsuI	RGATCY	1 cut(s)	1252
PvuI	CGATCG	1 cut(s)	286
PvuII	CAGCTG	1 cut(s)	22
RsaI	GTAC	2 cut(s)	292, 1424
RsaNI	GTAC	2 cut(s)	291, 1423
RseI	CAYNNNNRTG	1 cut(s)	1166
SacI	GAGCTC	2 cut(s)	1116, 1457
SapI	GCTCTTC	1 cut(s)	1121
SatI	GCNGC	7 cut(s)	16, 23, 360, 790, 890, 1083, 1369
Sau3AI	GATC	8 cut(s)	117, 126, 184, 283, 937, 1252, 1475, 1567
Sau96I	GGNCC	6 cut(s)	159, 207, 454, 690, 1061, 1351
ScaI	AGTACT	1 cut(s)	1424
SchI	GAGTC	4 cut(s)	285, 554, 1190, 1606
ScrFI	CCNGG	2 cut(s)	64, 210
SduI	GDGCHC	3 cut(s)	1116, 1419, 1457
SfcI	CTRYAG	1 cut(s)	1426
SinI	GGWCC	4 cut(s)	159, 454, 690, 1061
SmiMI	CAYNNNNRTG	1 cut(s)	1166
SmlI	CTYRAG	1 cut(s)	847
SmoI	CTYRAG	1 cut(s)	847
SseBI	AGGCCT	2 cut(s)	610, 1049
SsiI	CCGC	6 cut(s)	234, 298, 360, 1074, 1226, 1368
SspMI	CTAG	7 cut(s)	141, 504, 554, 588, 653, 861, 1065
SstI	GAGCTC	2 cut(s)	1116, 1457
StuI	AGGCCT	2 cut(s)	610, 1049
StyD4I	CCNGG	2 cut(s)	62, 208
StyI	CCWWGG	2 cut(s)	953, 1190
TaaI	ACNGT	2 cut(s)	883, 1328
TaiI	ACGT	1 cut(s)	201
TaqI	TCGA	6 cut(s)	286, 706, 802, 885, 1129, 1474
TatI	WGTACW	1 cut(s)	1422
TauI	GCSGC	2 cut(s)	362, 1371
TfiI	GAWTC	2 cut(s)	1264, 1439
TscAI	CASTG	4 cut(s)	328, 337, 886, 1303
TseFI	GTSAC	2 cut(s)	634, 730
TseI	GCWGC	5 cut(s)	15, 22, 789, 889, 1082
Tsp45I	GTSAC	2 cut(s)	634, 730
TspDTI	ATGAA	4 cut(s)	792, 1256, 1388, 1471
TspGWI	ACGGA	3 cut(s)	102, 270, 1114
TspRI	CASTG	4 cut(s)	328, 337, 886, 1303
VneI	GTGCAC	1 cut(s)	1415
VpaK11BI	GGWCC	4 cut(s)	159, 454, 690, 1061
VspI	ATTAAT	1 cut(s)	99
XagI	CCTNNNNNAGG	3 cut(s)	906, 1068, 1189
XapI	RAATTY	3 cut(s)	91, 302, 1157
XceI	RCATGY	1 cut(s)	1219
XmiI	GTMKAC	1 cut(s)	1323
XspI	CTAG	7 cut(s)	141, 504, 554, 588, 653, 861, 1065
ZrmI	AGTACT	1 cut(s)	1424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.