Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

9150608 .. 9153810

Gene Structure 3203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016696

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGAGTCTAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTACTTGAAGAAGCGCAGGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACAGATCCTTCTCTCCCTGTAGTGCAAACAAACAACATCCAAGGCGTTCTCACATTGCGAATGTACACACCCGATTCACAACTCAAGACGGAATTCAAGTCGAGATGGAGCAACTTGACTAAGGCAAGAAGATTACTTAATAACACTTCTTTTGGTTTAAATACATATGGCCTATACTCGTATGATTCGGTGTTGCTTCTTGCTCAAGCAATTGAATCATTTTTCGCTAATGGGTGGAACATTTCCTTTTCAAATGACACAAATTTGAGGGAGTTAAGTGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAAGCATTTTAGAGGTTAACACAACTGGCTTAACGGGACCAATTAAGTTTGATGCAGATGGGAACTTACTCAATCCTGCATTTGAAGTCATCAATGTGATTGGAACAGGGACTAGAACTATTGGCTATTGGTCTAACTCCTCGGGCTTAAATGTTCTTCCTCCAGAAAAGCTCCAAATGAAGATGCAGACTAATGGCTCCAGCGCCAGTGCTCAAAATCTGTACAGTGTGATCTGGCCCGGACAAACAACTGAGAAGCCTCGCGGATGGGTTTTCCCTTACAATGGCAGAAAGCTCAAGATTGGAGTCCCCCGTCGAGTCAGCTACCGCGAGTTTGTGGGTATACAAGGCACTGATTTCACTGGTTACTGCATTGAGGTCTTTCAAGCTGCACTAAATGAGTTACCATATGGGGTACCATACAAGTATGTCCCTTTTGGAGATGGTATCAAAAACCCAGAAAACAATGACCTTCTGCACAGAATCCAAATTGGGGAGTTTGATGGTATAGTAGGAGATATTACAATCACTACTAACAGAACAAAGATGGTGGATTTTACTCAACCTTATATTGAGTCTGGGCTAGTTGTGGTTGCTCCAATAAGGAAGATGAACTCAAGTGCTTGGGCTTTTCTGAGACCCTTTACTCCAATGATGTGGGGTGTTACTGGTGTTTTCTTCCTAGTTGTTGGAGCAGTTATTTGGATTTTGGAGCGCAGGACTAATGAGGATTTTAGGGGGCCTCCAAGAAGACAATTTGTGACAATTGTTTGGTTTAGCTTTTCGACTTTGTTCTTCTCCCAGAAAGAGAAAACTGGCAGCACACTTGGTCGCTTTGTGCTGATCATATGGCTATTTGTGGTACTAATAATCAACTCCAGCTACACTGCAAGCTTGACTTCGATCCTCACAGTGGAGCAACTTTCGTCACCTGTGAAAGGGATTGAGAGTTTAGCAACAGGCACTGAGCCCATTGGTTATCTAAGGGGTTCCTTTGCTGAAGCTTACTTAACCGACGAGCTAAACATACATCATAGCAGACTCTTTCCCCTTAACTCGCCGGAAGAGTATGAGAAGGCCTTAAAGAAAGGTCCTAGTGCAGGTGGTGTTGCTGCAGTGATTGATGAGCGTGCTTACATGGAGCTGTTCCTCTCTAGTCGATGTGGATATAGTATTGTTGGCCAAGAGTTCACTAAAATGGGTTGGGGATTTGCCTTTCCAAGGGACTCGCCATTGGCAATCGACATGTCGACCGCCATATTGAAGCTATCAGAGAACGGAAACCTGCAAAAGATTCATGACAAGTGGCTAATGAAAAGTGCTTGCAGTGCAGAAGGAGCAAAGCAAGCAGTAGACCGGCTTCAGCTAAAGAGCTTTTGGGGCCTCTTTCTACTAAGCGGCATTGCTTGCTTTCTTGCCCTTCTTCTTCATGTTCTTCGCATGGTTCGACAGTACTACCGGCATGCAGATTCCAACATCGAGAGCTCGCAATCTACAGGACGACTAAAGTCGTTTGTTTCGTTTGTAAATAAGAGGGAACAAGAAGTGGAAAGCAATTCCAAGAGCAGGACTAATAATAAAGCCTCAAATAAGGTAGCGCATGATCAAGAATGCAGTAGCGATGGTTTCGATGAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

704

Amino Acids

78.79

Weight (kDa)

8.33

Isoelectric Point (pI)

43.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 192	7.7e-35	Receptor family ligand binding region
SBP_bac_3	PF00497	273 - 595	3.5e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	275 - 356	2e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	376 - 627	7.2e-36	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1562
Acc36I	ACCTGC	2 cut(s)	1562, 1764
Acc65I	GGTACC	1 cut(s)	886
AccB1I	GGYRCC	1 cut(s)	886
AccI	GTMKAC	3 cut(s)	814, 1721, 1824
AccII	CGCG	2 cut(s)	735, 801
AciI	CCGC	4 cut(s)	735, 799, 1725, 1869
AclWI	GGATC	3 cut(s)	13, 134, 1369
AcoI	YGGCCR	1 cut(s)	1651
AcsI	RAATTY	2 cut(s)	227, 397
AcuI	CTGAAG	2 cut(s)	1491, 1817
AfaI	GTAC	6 cut(s)	54, 200, 695, 888, 1335, 1925
AfiI	CCNNNNNNNGG	7 cut(s)	755, 964, 1384, 1409, 1571, 1692, 2037
AflIII	ACRYGT	1 cut(s)	1716
AhlI	ACTAGT	1 cut(s)	35
Alw21I	GWGCWC	2 cut(s)	685, 1958
Alw26I	GTCTC	1 cut(s)	1102
AlwI	GGATC	3 cut(s)	13, 134, 1369
AlwNI	CAGNNNCTG	1 cut(s)	1436
Ama87I	CYCGRG	1 cut(s)	613
AoxI	GGCC	6 cut(s)	304, 707, 1211, 1548, 1651, 1852
ApeKI	GCWGC	3 cut(s)	860, 1290, 1583
ApoI	RAATTY	2 cut(s)	227, 397
Asp700I	GAANNNNTTC	1 cut(s)	446
Asp718I	GGTACC	1 cut(s)	886
AspLEI	GCGC	4 cut(s)	67, 677, 1188, 2071
AspS9I	GGNCC	5 cut(s)	509, 708, 1211, 1562, 1852
AsuC2I	CCSGG	1 cut(s)	711
AsuHPI	GGTGA	1 cut(s)	1392
AvaI	CYCGRG	1 cut(s)	613
AvaII	GGWCC	2 cut(s)	509, 1562
BalI	TGGCCA	1 cut(s)	1653
BanI	GGYRCC	1 cut(s)	886
BanII	GRGCYC	2 cut(s)	1443, 1958
BarI	GAAGNNNNNNTAC	2 cut(s)	1815, 1847
BbsI	GAAGAC	1 cut(s)	1228
Bbv12I	GWGCWC	2 cut(s)	685, 1958
BbvI	GCAGC	3 cut(s)	847, 1302, 1570
BccI	CCATC	8 cut(s)	76, 234, 524, 732, 908, 968, 1012, 2087
BclI	TGATCA	2 cut(s)	1314, 2074
BcnI	CCSGG	1 cut(s)	711
BcoDI	GTCTC	1 cut(s)	1102
BcuI	ACTAGT	1 cut(s)	35
BfaI	CTAG	7 cut(s)	9, 36, 585, 1055, 1154, 1566, 1626
BfmI	CTRYAG	3 cut(s)	153, 1584, 1965
BfoI	RGCGCY	1 cut(s)	678
BfuAI	ACCTGC	2 cut(s)	1562, 1764
BisI	GCNGC	4 cut(s)	861, 1291, 1584, 1870
BlsI	GCNGC	4 cut(s)	862, 1292, 1585, 1871
BmcAI	AGTACT	2 cut(s)	54, 1925
Bme1390I	CCNGG	1 cut(s)	711
Bme18I	GGWCC	2 cut(s)	509, 1562
BmeT110I	CYCGRG	1 cut(s)	613
BmgT120I	GGNCC	5 cut(s)	509, 708, 1211, 1562, 1852
BmiI	GGNNCC	6 cut(s)	510, 670, 888, 1212, 1462, 1853
BmrFI	CCNGG	1 cut(s)	711
BmsI	GCATC	3 cut(s)	424, 514, 645
BoxI	GACNNNNGTC	1 cut(s)	1978
BpiI	GAAGAC	1 cut(s)	1228
BpmI	CTGGAG	3 cut(s)	618, 655, 1333
BpuEI	CTTGAG	4 cut(s)	203, 324, 752, 1072
BpuMI	CCSGG	1 cut(s)	711
BsaBI	GATNNNNATC	2 cut(s)	17, 138
BsaI	GGTCTC	1 cut(s)	1102
BsaJI	CCNNGG	3 cut(s)	175, 612, 1691
Bsc4I	CCNNNNNNNGG	7 cut(s)	755, 964, 1384, 1409, 1571, 1692, 2037
Bse118I	RCCGGY	2 cut(s)	1827, 1929
Bse1I	ACTGG	5 cut(s)	502, 678, 838, 1144, 1291
Bse3DI	GCAATG	2 cut(s)	188, 1872
Bse8I	GATNNNNATC	2 cut(s)	17, 138
BseDI	CCNNGG	3 cut(s)	175, 612, 1691
BseGI	GGATG	2 cut(s)	171, 743
BseJI	GATNNNNATC	2 cut(s)	17, 138
BseLI	CCNNNNNNNGG	7 cut(s)	755, 964, 1384, 1409, 1571, 1692, 2037
BseMI	GCAATG	2 cut(s)	188, 1872
BseMII	CTCAG	3 cut(s)	714, 1097, 1428
BseNI	ACTGG	5 cut(s)	502, 678, 838, 1144, 1291
BseRI	GAGGAG	1 cut(s)	601
BseXI	GCAGC	3 cut(s)	847, 1302, 1570
BsgI	GTGCAG	5 cut(s)	8, 846, 932, 1590, 1821
Bsh1236I	CGCG	2 cut(s)	735, 801
Bsh1285I	CGRYCG	1 cut(s)	1725
BshFI	GGCC	6 cut(s)	306, 709, 1213, 1550, 1653, 1854
BshNI	GGYRCC	1 cut(s)	886
BsiEI	CGRYCG	1 cut(s)	1725
BsiHKAI	GWGCWC	2 cut(s)	685, 1958
BsiHKCI	CYCGRG	1 cut(s)	613
BsiSI	CCGG	4 cut(s)	711, 1532, 1828, 1930
BslFI	GGGAC	5 cut(s)	522, 595, 764, 887, 1709
BslI	CCNNNNNNNGG	7 cut(s)	755, 964, 1384, 1409, 1571, 1692, 2037
BsmAI	GTCTC	1 cut(s)	1102
BsmFI	GGGAC	5 cut(s)	522, 595, 764, 887, 1709
BsmI	GAATGC	1 cut(s)	2087
BsnI	GGCC	6 cut(s)	306, 709, 1213, 1550, 1653, 1854
Bso31I	GGTCTC	1 cut(s)	1102
BsoBI	CYCGRG	1 cut(s)	613
Bsp1286I	GDGCHC	3 cut(s)	685, 1443, 1958
Bsp1407I	TGTACA	2 cut(s)	198, 693
Bsp143I	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
BspACI	CCGC	4 cut(s)	735, 799, 1725, 1869
BspANI	GGCC	6 cut(s)	306, 709, 1213, 1550, 1653, 1854
BspCNI	CTCAG	3 cut(s)	715, 1098, 1429
BspFNI	CGCG	2 cut(s)	735, 801
BspHI	TCATGA	1 cut(s)	1768
BspLI	GGNNCC	6 cut(s)	510, 670, 888, 1212, 1462, 1853
BspMAI	CTGCAG	1 cut(s)	1588
BspMI	ACCTGC	2 cut(s)	1562, 1764
BspPI	GGATC	3 cut(s)	13, 134, 1369
BspT107I	GGYRCC	1 cut(s)	886
BspTNI	GGTCTC	1 cut(s)	1102
BsrDI	GCAATG	2 cut(s)	188, 1872
BsrFI	RCCGGY	2 cut(s)	1827, 1929
BsrGI	TGTACA	2 cut(s)	198, 693
BsrI	ACTGG	5 cut(s)	502, 678, 838, 1144, 1291
BssAI	RCCGGY	2 cut(s)	1827, 1929
BssECI	CCNNGG	3 cut(s)	175, 612, 1691
BssMI	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
BssNAI	GTATAC	1 cut(s)	815
BssT1I	CCWWGG	2 cut(s)	175, 1691
Bst1107I	GTATAC	1 cut(s)	815
Bst4CI	ACNGT	3 cut(s)	698, 1384, 1923
Bst6I	CTCTTC	1 cut(s)	1530
BstAPI	GCANNNNNTGC	1 cut(s)	1878
BstAUI	TGTACA	2 cut(s)	198, 693
BstC8I	GCNNGC	8 cut(s)	461, 1363, 1602, 1795, 1818, 1879, 1935, 1958
BstDEI	CTNAG	6 cut(s)	255, 723, 1106, 1437, 1454, 1865
BstENI	CCTNNNNNAGG	3 cut(s)	1407, 1569, 1690
BstF5I	GGATG	2 cut(s)	171, 743
BstFNI	CGCG	2 cut(s)	735, 801
BstH2I	RGCGCY	1 cut(s)	678
BstHHI	GCGC	4 cut(s)	67, 677, 1188, 2071
BstKTI	GATC	6 cut(s)	21, 142, 705, 1317, 1377, 2077
BstMAI	GTCTC	1 cut(s)	1102
BstMBI	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
BstMCI	CGRYCG	1 cut(s)	1725
BstMWI	GCNNNNNNNGC	5 cut(s)	1799, 1808, 1817, 1851, 1878
BstNSI	RCATGY	2 cut(s)	1720, 1937
BstPAI	GACNNNNGTC	1 cut(s)	1978
BstSCI	CCNGG	1 cut(s)	709
BstSFI	CTRYAG	3 cut(s)	153, 1584, 1965
BstUI	CGCG	2 cut(s)	735, 801
BstV1I	GCAGC	3 cut(s)	847, 1302, 1570
BstV2I	GAAGAC	1 cut(s)	1228
BstX2I	RGATCY	1 cut(s)	139
BstXI	CCANNNNNNTGG	1 cut(s)	1128
BstYI	RGATCY	1 cut(s)	139
BstZ17I	GTATAC	1 cut(s)	815
BsuRI	GGCC	6 cut(s)	306, 709, 1213, 1550, 1653, 1854
BtgZI	GCGATG	1 cut(s)	2106
BtsCI	GGATG	2 cut(s)	171, 743
BtsI	GCAGTG	3 cut(s)	1356, 1593, 1804
BtsIMutI	CAGTG	9 cut(s)	685, 703, 822, 831, 1356, 1389, 1434, 1593, 1804
BveI	ACCTGC	2 cut(s)	1562, 1764
Cac8I	GCNNGC	8 cut(s)	461, 1363, 1602, 1795, 1818, 1879, 1935, 1958
CaiI	CAGNNNCTG	1 cut(s)	1436
CciI	TCATGA	1 cut(s)	1768
CfoI	GCGC	4 cut(s)	67, 677, 1188, 2071
Cfr10I	RCCGGY	2 cut(s)	1827, 1929
Cfr13I	GGNCC	5 cut(s)	509, 708, 1211, 1562, 1852
Csp6I	GTAC	6 cut(s)	53, 199, 694, 887, 1334, 1924
CspCI	CAANNNNNGTGG	2 cut(s)	1002, 1037
CviAII	CATG	7 cut(s)	1609, 1717, 1769, 1901, 1912, 1934, 2072
CviQI	GTAC	6 cut(s)	53, 199, 694, 887, 1334, 1924
DdeI	CTNAG	6 cut(s)	255, 723, 1106, 1437, 1454, 1865
DpnI	GATC	6 cut(s)	20, 141, 704, 1316, 1376, 2076
DpnII	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
DraI	TTTAAA	1 cut(s)	294
EaeI	YGGCCR	1 cut(s)	1651
Eam1104I	CTCTTC	1 cut(s)	1530
EarI	CTCTTC	1 cut(s)	1530
Ecl136II	GAGCTC	1 cut(s)	1956
Eco130I	CCWWGG	2 cut(s)	175, 1691
Eco147I	AGGCCT	1 cut(s)	1550
Eco24I	GRGCYC	2 cut(s)	1443, 1958
Eco31I	GGTCTC	1 cut(s)	1102
Eco47I	GGWCC	2 cut(s)	509, 1562
Eco53kI	GAGCTC	1 cut(s)	1956
Eco57I	CTGAAG	2 cut(s)	1491, 1817
Eco88I	CYCGRG	1 cut(s)	613
EcoICRI	GAGCTC	1 cut(s)	1956
EcoNI	CCTNNNNNAGG	3 cut(s)	1407, 1569, 1690
EcoO109I	RGGNCCY	3 cut(s)	1211, 1562, 1852
EcoRI	GAATTC	1 cut(s)	227
EcoT14I	CCWWGG	2 cut(s)	175, 1691
EcoT38I	GRGCYC	2 cut(s)	1443, 1958
ErhI	CCWWGG	2 cut(s)	175, 1691
FaeI	CATG	7 cut(s)	1612, 1720, 1772, 1904, 1915, 1937, 2075
FalI	AAGNNNNNCTT	2 cut(s)	1354, 1386
FaqI	GGGAC	5 cut(s)	522, 595, 764, 887, 1709
FatI	CATG	7 cut(s)	1608, 1716, 1768, 1900, 1911, 1933, 2071
FauNDI	CATATG	3 cut(s)	301, 880, 1319
FbaI	TGATCA	2 cut(s)	1314, 2074
FblI	GTMKAC	3 cut(s)	814, 1721, 1824
Fnu4HI	GCNGC	4 cut(s)	861, 1291, 1584, 1870
FokI	GGATG	2 cut(s)	158, 750
FriOI	GRGCYC	2 cut(s)	1443, 1958
Fsp4HI	GCNGC	4 cut(s)	861, 1291, 1584, 1870
FspBI	CTAG	7 cut(s)	9, 36, 585, 1055, 1154, 1566, 1626
GlaI	GCGC	4 cut(s)	66, 676, 1187, 2070
GluI	GCNGC	4 cut(s)	861, 1291, 1584, 1870
GsuI	CTGGAG	3 cut(s)	618, 655, 1333
HaeII	RGCGCY	1 cut(s)	678
HaeIII	GGCC	6 cut(s)	306, 709, 1213, 1550, 1653, 1854
HapII	CCGG	4 cut(s)	711, 1532, 1828, 1930
HhaI	GCGC	4 cut(s)	67, 677, 1188, 2071
Hin1II	CATG	7 cut(s)	1612, 1720, 1772, 1904, 1915, 1937, 2075
Hin6I	GCGC	4 cut(s)	65, 675, 1186, 2069
HinP1I	GCGC	4 cut(s)	65, 675, 1186, 2069
HincII	GTYRAC	2 cut(s)	490, 1722
HindII	GTYRAC	2 cut(s)	490, 1722
HindIII	AAGCTT	2 cut(s)	1363, 1473
HpaI	GTTAAC	1 cut(s)	490
HpaII	CCGG	4 cut(s)	711, 1532, 1828, 1930
HphI	GGTGA	1 cut(s)	1392
Hpy166II	GTNNAC	6 cut(s)	201, 490, 815, 1662, 1722, 1825
Hpy188I	TCNGA	3 cut(s)	18, 1107, 1744
Hpy188III	TCNNGA	8 cut(s)	220, 237, 431, 635, 769, 1769, 1951, 2078
Hpy8I	GTNNAC	6 cut(s)	201, 490, 815, 1662, 1722, 1825
Hpy99I	CGWCG	2 cut(s)	789, 1490
HpyAV	CCTTC	5 cut(s)	153, 953, 1540, 1799, 1901
HpyCH4III	ACNGT	3 cut(s)	698, 1384, 1923
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1799, 1808, 1817, 1851, 1878
HpyF3I	CTNAG	6 cut(s)	255, 723, 1106, 1437, 1454, 1865
Hsp92II	CATG	7 cut(s)	1612, 1720, 1772, 1904, 1915, 1937, 2075
HspAI	GCGC	4 cut(s)	65, 675, 1186, 2069
KpnI	GGTACC	1 cut(s)	890
Ksp22I	TGATCA	2 cut(s)	1314, 2074
KspAI	GTTAAC	1 cut(s)	490
Kzo9I	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
Lsp1109I	GCAGC	3 cut(s)	847, 1302, 1570
LweI	GCATC	3 cut(s)	424, 514, 645
MaeI	CTAG	7 cut(s)	9, 36, 585, 1055, 1154, 1566, 1626
MaeIII	GTNAC	5 cut(s)	836, 873, 1135, 1231, 1398
MalI	GATC	6 cut(s)	20, 141, 704, 1316, 1376, 2076
MboI	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
MfeI	CAATTG	3 cut(s)	345, 464, 1236
MflI	RGATCY	1 cut(s)	139
MhlI	GDGCHC	3 cut(s)	685, 1443, 1958
MlsI	TGGCCA	1 cut(s)	1653
MluCI	AATT	9 cut(s)	227, 345, 397, 464, 513, 960, 1226, 1236, 2026
MluNI	TGGCCA	1 cut(s)	1653
MlyI	GAGTC	6 cut(s)	14, 786, 798, 1055, 1506, 1691
MmeI	TCCRAC	2 cut(s)	1141, 1968
Mox20I	TGGCCA	1 cut(s)	1653
MroXI	GAANNNNTTC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	1653
MslI	CAYNNNNRTG	2 cut(s)	566, 1667
Msp20I	TGGCCA	1 cut(s)	1653
MspI	CCGG	4 cut(s)	711, 1532, 1828, 1930
MspR9I	CCNGG	1 cut(s)	711
MunI	CAATTG	3 cut(s)	345, 464, 1236
Mva1269I	GAATGC	1 cut(s)	2087
MvnI	CGCG	2 cut(s)	735, 801
MwoI	GCNNNNNNNGC	5 cut(s)	1799, 1808, 1817, 1851, 1878
NciI	CCSGG	1 cut(s)	711
NdeI	CATATG	3 cut(s)	301, 880, 1319
NdeII	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
NlaIII	CATG	7 cut(s)	1612, 1720, 1772, 1904, 1915, 1937, 2075
NlaIV	GGNNCC	6 cut(s)	510, 670, 888, 1212, 1462, 1853
NmuCI	GTSAC	2 cut(s)	1231, 1398
NspI	RCATGY	2 cut(s)	1720, 1937
PaeI	GCATGC	1 cut(s)	1937
PagI	TCATGA	1 cut(s)	1768
PaqCI	CACCTGC	1 cut(s)	1562
PceI	AGGCCT	1 cut(s)	1550
PciI	ACATGT	1 cut(s)	1716
PcsI	WCGNNNNNNNCGW	2 cut(s)	1915, 1988
PctI	GAATGC	1 cut(s)	2087
PdmI	GAANNNNTTC	1 cut(s)	446
PfeI	GAWTC	8 cut(s)	13, 209, 320, 350, 427, 954, 1765, 1940
PkrI	GCNGC	4 cut(s)	862, 1292, 1585, 1871
PleI	GAGTC	6 cut(s)	13, 785, 797, 1054, 1506, 1691
PpsI	GAGTC	6 cut(s)	13, 785, 797, 1054, 1506, 1691
PpuMI	RGGWCCY	1 cut(s)	1562
PscI	ACATGT	1 cut(s)	1716
PshAI	GACNNNNGTC	1 cut(s)	1978
Psp124BI	GAGCTC	1 cut(s)	1958
Psp5II	RGGWCCY	1 cut(s)	1562
PspN4I	GGNNCC	6 cut(s)	510, 670, 888, 1212, 1462, 1853
PspPI	GGNCC	5 cut(s)	509, 708, 1211, 1562, 1852
PspPPI	RGGWCCY	1 cut(s)	1562
PstI	CTGCAG	1 cut(s)	1588
PstNI	CAGNNNCTG	1 cut(s)	1436
PsuI	RGATCY	1 cut(s)	139
RsaI	GTAC	6 cut(s)	54, 200, 695, 888, 1335, 1925
RsaNI	GTAC	6 cut(s)	53, 199, 694, 887, 1334, 1924
RseI	CAYNNNNRTG	2 cut(s)	566, 1667
SacI	GAGCTC	1 cut(s)	1958
SalI	GTCGAC	1 cut(s)	1720
SatI	GCNGC	4 cut(s)	861, 1291, 1584, 1870
Sau3AI	GATC	6 cut(s)	18, 139, 702, 1314, 1374, 2074
Sau96I	GGNCC	5 cut(s)	509, 708, 1211, 1562, 1852
ScaI	AGTACT	2 cut(s)	54, 1925
SchI	GAGTC	6 cut(s)	14, 786, 798, 1055, 1506, 1691
ScrFI	CCNGG	1 cut(s)	711
SduI	GDGCHC	3 cut(s)	685, 1443, 1958
SfaNI	GCATC	3 cut(s)	424, 514, 645
SfcI	CTRYAG	3 cut(s)	153, 1584, 1965
SinI	GGWCC	2 cut(s)	509, 1562
SmiMI	CAYNNNNRTG	2 cut(s)	566, 1667
SmlI	CTYRAG	4 cut(s)	218, 339, 767, 1087
SmoI	CTYRAG	4 cut(s)	218, 339, 767, 1087
SpeI	ACTAGT	1 cut(s)	35
SphI	GCATGC	1 cut(s)	1937
Sse9I	AATT	9 cut(s)	227, 345, 397, 464, 513, 960, 1226, 1236, 2026
SseBI	AGGCCT	1 cut(s)	1550
SsiI	CCGC	4 cut(s)	735, 799, 1725, 1869
SspMI	CTAG	7 cut(s)	9, 36, 585, 1055, 1154, 1566, 1626
SstI	GAGCTC	1 cut(s)	1958
StuI	AGGCCT	1 cut(s)	1550
StyD4I	CCNGG	1 cut(s)	709
StyI	CCWWGG	2 cut(s)	175, 1691
TaaI	ACNGT	3 cut(s)	698, 1384, 1923
TasI	AATT	9 cut(s)	227, 345, 397, 464, 513, 960, 1226, 1236, 2026
TatI	WGTACW	4 cut(s)	52, 198, 693, 1923
TauI	GCSGC	1 cut(s)	1872
TfiI	GAWTC	8 cut(s)	13, 209, 320, 350, 427, 954, 1765, 1940
TscAI	CASTG	9 cut(s)	685, 703, 829, 838, 1363, 1389, 1441, 1593, 1804
TseFI	GTSAC	2 cut(s)	1231, 1398
TseI	GCWGC	3 cut(s)	860, 1290, 1583
Tsp45I	GTSAC	2 cut(s)	1231, 1398
TspDTI	ATGAA	5 cut(s)	665, 1097, 1757, 1799, 1889
TspGWI	ACGGA	2 cut(s)	239, 1764
TspRI	CASTG	9 cut(s)	685, 703, 829, 838, 1363, 1389, 1441, 1593, 1804
VpaK11BI	GGWCC	2 cut(s)	509, 1562
XagI	CCTNNNNNAGG	3 cut(s)	1407, 1569, 1690
XapI	RAATTY	2 cut(s)	227, 397
XceI	RCATGY	2 cut(s)	1720, 1937
XmiI	GTMKAC	3 cut(s)	814, 1721, 1824
XmnI	GAANNNNTTC	1 cut(s)	446
XspI	CTAG	7 cut(s)	9, 36, 585, 1055, 1154, 1566, 1626
ZrmI	AGTACT	2 cut(s)	54, 1925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.