Rh2AG110600

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
9858171 .. 9876903
18733 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG110600.1

Sequence Viewer

Length: 5505 bp
ATGAATATAGCCTTGCTTCTGCTTTTTTTGGTTTTCTGTAAGGGTTCTCATACTAGGGGACTAATTACTAATGTCACTACAAGACCTGATATATTGAACATTGGTTCGATGTTCACTTTCGATTCTGTCATTGGGAAAATTGCAAAACTTGCCATAACACTTGCGGTTGAAGATGTCAATTCCAATCCCAACATTCTCAAGGGCACAAAGCTCTCACTCAAAATGCATGACACCAAATCGAGTGACTTCCTCGGAATCGTTGAAGCTTTGCAATTTATGGAAAATGACACAGTGGCGATAATTGGCCCCCAATTCTCAGCTACAGCTCATGTTATCTCACACATAGCAAATGAGCTCCAAGTGCCTTTGTTATCATTTGCAGCAACGGACCCTACTCTATCTCCTGTTCAGTTCCCTTTCTTTGTTCGAACAACACGAAGCGATCTCTTTCAGATGACAGCAGTGGTAGACCTTGTTGTTCACTACGAGTGGAGAGATGTCATAGCAATATATGTAGATGACGATTTTGGAAGAAATGCTATTGCTTCCTTGGGTGATAAGCTAGCCGAAAAGCGCTGCAAGATTTCATACAAAGTGCCTTTGACTCCCACAGCAACAAAAGATGAGATCAGAAAGGCACTGATCAGTGTGTCTACAATGGAGTCTAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTACTTGAAGAAGCGCAGGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACAGATCCTTCTCTCCCTCTAGTGCAAACAAACAACATCCAAGGCGTTCTCACATTGCGAATGTACACACCCGATTCACAACTCAAGACGGAATTCAAGTCGAGATGGAGCAACTTGACTAAGGCAAGAAGATTACTTAATAACACTTCTTTTGGTTTAAATACATATGGCCTATACGCGTATGATTCGGTGTTGCTTCTTGCTCAAGCAATTGAATCATTTTTCGCTAATGGGTGGAACATTTCCTTTTCAAATGACACAAATTTGAGGGAGTTAAGTGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAAGTATTTTAGAGGTTAACACAACTGGCTTGACAGGACCGATTAAGTTTGATACTGATGGGAACTTACTCAATCCTGCATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGAACTATTGGCTATTGGTCGAACTCCTCGGGCTTAAATGTTCTTCCTCCAGAAAAGCTCCAAATGAAGATGCAGACTAATGGCTCCAGCCCCGGTGCTCAAAATCTGTACAGTGTGATCTGGCCTGGACAAACAATTGAGAAGCCTCGCGGATGGGTTTTCCCTTACAATGGCAGAAAGCTCAAGATTGGAGTCCCTCGTCGAGTCAGCTACCGCGAGTTTGTGGGTATACAAGGCACTGATTTCACTGGTTACTGCATTGAGGTCTTTCAAGCTGCACTAAATGAGTTACCATATGGGGTACCATACAAGTATGTCCCTTTTGGAGATGGTATCAAAAACCCAGGAAACAATGACCTTCTGCACAGAATCCAAATTGGGGAGTTTGATGGTGTAGTAGGAGATATTACAATCACTACTAACAGAACAAAGATGGTGGATTTTACTCAACCTTATATTGAGTCTGGGCTAGTTGTGGTTGCTCCAATAAGGAAGATGAACTCAAGTGCTTGGGCTTTTCTGAGACCCTTTACTCCAATGATGTGGGGTGTTACTGGTGTTTTCTTCCTAGTTGTGGGAGCAGTTATTTGGATTTTGGAGCGCAGGACTAATGAGGATTTTAGGGGGCATCCAAGAAGACAATTTGTGACAATTGTTTGGTTTAGCTTTTCAACTTTGTTCTTCTCCCAGAAAGAGAAAACTGGCAGCACACTTGGTCGCTTTGTGCTGATCATATGGCTATTTGTGGTACTAATACTCAACTCCAGCTACACTGCAAGCTTGACTTCGATCCTCACAGTGGAGCAACTTTCGTCACCTGTGAAAGGGATTGAAAGTTTAGCAACAGGCACTGAGCCCATTGGTTATCTAAGGGGTTCCTTTGCTGAAGCTTACTTAACCGACGAGCTGAACATACATCATAACCGACTCTTTCCCCTTAACTCACCGGAAGAGTATGAGAAGGCCTTGAAGAAAGGTCCTAGTGCAGGTGGTGTTGCTGCAGTGATTGATGAGCGTGCTTACATGGAGCTCTTCCTCTCTAGTCGATGTGGATATAGTATTGTTGGTCAAGAGTTCACTAAAATGGGTTGGGGATTTGCCTTTCCAAGGGACTCGCCGTTGGCAATCGACATGTCGACCGCCATATTGAAGCTATCGGAGAACGGAAACCTGCAAAAGATTCATGACAAGTGGCTAATGAAAAGTGCTTGCAGTGCAGAAGGAGCAAAGCAAGCAGTAGACCGCCTTCAGCTAAAGAGCTTTTGGGGCCTCTTTCTACTAAGTGGCATTGCTTGCTTTCTTGCTCTTCTTCTTCATGTTCTTCGCATGGTTCAACAGTACTACCGGCATGCAGATTCCGACATCGAGAGCTCGCAATCTACAGGACGACTGAAATCGTTTGTTTCGTTTGTAAATAAGAGGGAACAAGAAGTGAAAAGCAGTTCCAAGAGTAAAGCCTCAAATAAGATAGCGCATGATCAAGAATGCACTAGCGATGCCTTGCTTCTGCTTTTTTTGGTTTTCTGTAAGGGTTCTCATACTAGTGGACTCATTACCAATGTCACTACAAGACCTGATGTATTGAACATTGGTTCGATGTTCACTTTCGTTTCTGTCATTGGGAAAATTGCAAAACTTGCCATAACACTTGCGGTTGAAGATGTCAATTCCAATCCCAACATTCTCAATGGCACAAAGCTCTCACTCAAAATGCATAACACCAAATCGAGTGACTTCCTCGGAATCGTTGAAGCTTTGCAGTTTATGGAGAATGACACAGTGGCCATAATTGGCCCCCAATTCTCAGCTACAGCTCACGTTATCTCACACATAGCAAATGAGCTCCAAGTGCCTTTGTTATCATTTGCAGCAACAGATCCTACTCTATCTCCTGTTCAGTTCCCTTTCTTGGTTAGAACAACGCGAAGCGATCTCTTTCAGATGACAGCAGTGGTAGACCTTGTTGTTCACTACGAGTGGAGAGATGTCATAGCAATATATGTAGATGACGATTTTGGAAGAAATGCTATTGCTTCCTTGGGTGATAAGCTAGCCAAAAAGCGCTGCAAGATTTCATACAAAGTTCCTTTGACTCCCACAGCAACAAAAGAGGAGATCAGAAAGGCACTGATCAGTGTGTCTACAATGGAGTCTAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTACTTGAAGAAGCGCAGGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACAGACCCTTCTCTCCCTCTAGTGCAAACAAACAACATCCAAGGCGTTCTCACATTGCGAATGTACACACCCGATTCACAACTCAAGACGGAATTCAAGTCGAGATGGAGCAACTTGACTAAGGCAAGAAGATTACTTAATAACACTTCTTTTGGTTTAAATACATATGGCCTATACGCGTATGATTCGGTGTTGCTTCTTGCTCAAGCAATTGAATCATTTTTCGCTAATGGGTGGAACATTTCCTTTTCAAAGGACACAAATTTGAGGGAGTTAAGCGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAAGCATTTTAGAGGTTAACACAACTGGCTTAACAGGACCGATTAAGTTTGATGCTGATGGGAACTTACTCAATCCTGCATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGAACTATTGGCTATTGGTCTAACTCCTCGGGCTTAAATGTTCTTCCTCCAGAAAAGCTCCAAATGAAGATGCAGACTAATGGCTCCAGCCCCGGTACTAAAAAACTGTACGGTGTGATCTGGCCTGGACAAACAACTGAGAAGCCTCGCGGATGGGTTTTCCCTTACAATGGCAGAAAGCTCAGGATTGGAGTCCCCCATCGAGTTAGCTACCCCGAGTTTGTGGGTATAAAAGGCACTGATTTCAGTGGTTACTGCATTGAGGTCTTTCAGGCTGCACTAAATGAGTTACCATATGGTGTACCATACAAGTATATCCCTTTTGGAGATGGTATCAAAAACCCAGAAAACAATGACCTTCTCCACAGAGTTCAAATTGGGGAGTTTGATGGTGTAGTAGGAGATATTACAATCACTACTAACAGAACAAAGATGGTGGATTTTACTCAACCTTATATTGAGTCTGGGCTAGTTGTGGTTGCTCCAATAAGGAAGATGGACTCCAGTGCTTGGGCTTTTCTGAGACCCTTGACTCCAATGATGTGGGGTGTTACTGGTGTTTTCTTCCTAGTTGTGGGAACAGTTGTTTGGATTTTGGAGCGCAGGACTAATGAGGATTTTAGGGGGCCTCCAAAAAGGCAATTGGTCACGATTGTTTGGTTTAGCTTTTCGACTTTGTTCTTCTCCCAGAAAGAGAAAACCGGCAGCACACTTGGTCGCTTTGTGGTAATCATATGGCTATTTGTGGTACTAATACTCAACTCCAGCTACACAGCAAGCTTGACTTCGATCCTCACAGTGGAGCAACTGTCTTCACCTGTGAAAGGGATTGAAAGTTTAGTAACAGGCACTGAGCCCATTGGTTATCTAAGGGGTTCCTTTGCTGAAGCTTACTTAACCGACGAGCTGAACATACATCATAGCAGACTTGTTGCCCTTAACTCGCCGGAAGATTATGAGAAGGCCTTGAAGAAAGGTCCTAGTGCAGGTGGTGTTGCTGCAGTGATTGATGAGCGTGCTTACATGGAGCTCTTCCTCTCTAGTCGATGTGGATATAGTATTGTTGGTCAAGAGTTCACTAAAATGGGTTGGGGATTTGCCTTTTCGAGGGACTCCCCATTGGCAATCGACATGTCGACCGCCATATTGAAGCTATCGGAGAACGGAAACTTGCAAAAGATCCATGACAAGTGGCTAATGAAAAGTGCTTGCAGTGCAGAAGGAGAAAAGCAAGCAGTAGACCGCCTTCAGCTAAAGAGCTTTTGGGGCCTCTTTCTACTAAGCGGCATTGCTTGCTTTCTTGCTCTTCTTCTTTATGTTCTTCGCATGGTTCGACAGTACTACCGACATGCAGATTCCGACATCGAGTGCTCGCAATCAACAGGACGACTGAAGTCGTTTGTTTCGTTTGTAAATAAGAGGGAACAAGAAGTGAAAAGCAGTTCCAAGGGAAGAAGGACTGATAACAGAGCCTCAAATAAGATAGTGCATCATCAAGAATGCAGTAGCGATGGTTTGGACTTGACTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1834

Amino Acids

204.32

Weight (kDa)

8.6

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 45 - 337 5e-14 Periplasmic binding protein
ANF_receptor PF01094 49 - 411 6.3e-92 Receptor family ligand binding region
SBP_bac_3 PF00497 492 - 814 3.2e-11 Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd PF10613 494 - 575 3e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 595 - 846 1e-34 Ligand-gated ion channel
Peripla_BP_6 PF13458 954 - 1247 1.8e-12 Periplasmic binding protein
ANF_receptor PF01094 959 - 1321 1.4e-90 Receptor family ligand binding region
SBP_bac_3 PF00497 1394 - 1724 3.7e-11 Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd PF10613 1404 - 1485 3.6e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 1505 - 1756 1.1e-35 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2219, 4949
Acc36I ACCTGC 3 cut(s) 2219, 2421, 4949
Acc65I GGTACC 1 cut(s) 1543
AccB1I GGYRCC 1 cut(s) 1543
AccB7I CCANNNNNTGG 1 cut(s) 4482
AccI GTMKAC 9 cut(s) 468, 653, 1471, 2378, 2481, 3198, 3383, 5108, 5211
AccII CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
AclWI GGATC 7 cut(s) 670, 791, 2026, 3113, 3400, 4756, 5146
AcoI YGGCCR 1 cut(s) 3024
AcsI RAATTY 4 cut(s) 884, 1054, 3614, 3784
AcuI CTGAAG 5 cut(s) 2148, 2474, 4878, 5204, 5384
AfeI AGCGCT 2 cut(s) 575, 3305
AflIII ACRYGT 4 cut(s) 969, 2373, 3699, 5103
AhlI ACTAGT 3 cut(s) 692, 2783, 3422
AjnI CCWGG 3 cut(s) 1366, 1585, 4096
AjuI GAANNNNNNNTTGG 2 cut(s) 4543, 4575
Alw21I GWGCWC 7 cut(s) 357, 1342, 2274, 2615, 3087, 5004, 5345
Alw26I GTCTC 2 cut(s) 1759, 4489
AlwI GGATC 7 cut(s) 670, 791, 2026, 3113, 3400, 4756, 5146
AlwNI CAGNNNCTG 2 cut(s) 2093, 4823
Ama87I CYCGRG 3 cut(s) 1270, 4000, 4187
Aor51HI AGCGCT 2 cut(s) 575, 3305
ApoI RAATTY 4 cut(s) 884, 1054, 3614, 3784
Asp700I GAANNNNTTC 2 cut(s) 1103, 3833
Asp718I GGTACC 1 cut(s) 1543
AspLEI GCGC 7 cut(s) 576, 724, 1845, 2716, 3306, 3454, 4575
AsuC2I CCSGG 2 cut(s) 1335, 4065
AsuHPI GGTGA 5 cut(s) 566, 2049, 2178, 3296, 4779
AsuII TTCGAA 1 cut(s) 427
AsuNHI GCTAGC 2 cut(s) 562, 3292
AvaI CYCGRG 3 cut(s) 1270, 4000, 4187
AvaII GGWCC 5 cut(s) 388, 1166, 2219, 3896, 4949
BaeGI GKGCMC 1 cut(s) 206
BalI TGGCCA 1 cut(s) 3026
BanI GGYRCC 1 cut(s) 1543
BanII GRGCYC 7 cut(s) 357, 2100, 2274, 2615, 3087, 4830, 5004
BarI GAAGNNNNNNTAC 4 cut(s) 2472, 2504, 5202, 5234
BbsI GAAGAC 2 cut(s) 1885, 4776
Bbv12I GWGCWC 7 cut(s) 357, 1342, 2274, 2615, 3087, 5004, 5345
BceAI ACGGC 1 cut(s) 2344
BciT130I CCWGG 3 cut(s) 1368, 1587, 4098
BclI TGATCA 4 cut(s) 642, 1971, 2719, 3372
BcnI CCSGG 2 cut(s) 1335, 4065
BcoDI GTCTC 2 cut(s) 1759, 4489
BcuI ACTAGT 3 cut(s) 692, 2783, 3422
BfmI CTRYAG 5 cut(s) 321, 2241, 2622, 3051, 4971
BfoI RGCGCY 2 cut(s) 577, 3307
BfuAI ACCTGC 3 cut(s) 2219, 2421, 4949
BmcAI AGTACT 4 cut(s) 711, 2582, 3441, 5312
Bme1390I CCNGG 5 cut(s) 1335, 1368, 1587, 4065, 4098
Bme18I GGWCC 5 cut(s) 388, 1166, 2219, 3896, 4949
BmeT110I CYCGRG 3 cut(s) 1270, 4000, 4187
BmrFI CCNGG 5 cut(s) 1335, 1368, 1587, 4065, 4098
BmsI GCATC 8 cut(s) 1081, 1302, 1879, 2728, 3811, 3901, 4032, 5470
BmtI GCTAGC 2 cut(s) 566, 3296
BoxI GACNNNNGTC 1 cut(s) 5365
BpiI GAAGAC 2 cut(s) 1885, 4776
BpmI CTGGAG 7 cut(s) 1275, 1312, 1990, 4005, 4042, 4459, 4720
Bpu10I CCTNAGC 1 cut(s) 4154
Bpu14I TTCGAA 1 cut(s) 427
BpuEI CTTGAG 7 cut(s) 182, 860, 981, 1409, 1729, 3590, 3711
BpuMI CCSGG 2 cut(s) 1335, 4065
BsaBI GATNNNNATC 3 cut(s) 674, 795, 3404
BsaI GGTCTC 2 cut(s) 1759, 4489
BsaWI WCCGGW 1 cut(s) 2188
BsaXI ACNNNNNCTCC 6 cut(s) 385, 415, 3115, 3145, 4766, 4796
Bse118I RCCGGY 2 cut(s) 2586, 4673
Bse1I ACTGG 7 cut(s) 1159, 1495, 1801, 1948, 3889, 4476, 4531
Bse3DI GCAATG 4 cut(s) 845, 2529, 3575, 5259
Bse8I GATNNNNATC 3 cut(s) 674, 795, 3404
BseBI CCWGG 3 cut(s) 1368, 1587, 4098
BseGI GGATG 5 cut(s) 828, 1400, 1870, 3558, 4130
BseJI GATNNNNATC 3 cut(s) 674, 795, 3404
BseMI GCAATG 4 cut(s) 845, 2529, 3575, 5259
BseMII CTCAG 8 cut(s) 330, 1754, 2085, 3060, 4101, 4168, 4484, 4815
BseNI ACTGG 7 cut(s) 1159, 1495, 1801, 1948, 3889, 4476, 4531
BseRI GAGGAG 3 cut(s) 1258, 3368, 3988
BseSI GKGCMC 1 cut(s) 206
BsgI GTGCAG 9 cut(s) 665, 1503, 1589, 2247, 2478, 3395, 4233, 4977, 5208
Bsh1236I CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
Bsh1285I CGRYCG 2 cut(s) 2382, 5112
BshNI GGYRCC 1 cut(s) 1543
BsiEI CGRYCG 2 cut(s) 2382, 5112
BsiHKAI GWGCWC 7 cut(s) 357, 1342, 2274, 2615, 3087, 5004, 5345
BsiHKCI CYCGRG 3 cut(s) 1270, 4000, 4187
BsiSI CCGG 6 cut(s) 1335, 2189, 2587, 4065, 4674, 4919
BslFI GGGAC 8 cut(s) 72, 1252, 1421, 1544, 2366, 3982, 4151, 5096
BsmAI GTCTC 2 cut(s) 1759, 4489
BsmFI GGGAC 8 cut(s) 72, 1252, 1421, 1544, 2366, 3982, 4151, 5096
BsmI GAATGC 2 cut(s) 2732, 5477
Bso31I GGTCTC 2 cut(s) 1759, 4489
BsoBI CYCGRG 3 cut(s) 1270, 4000, 4187
Bsp119I TTCGAA 1 cut(s) 427
Bsp1407I TGTACA 3 cut(s) 855, 1350, 3585
BspCNI CTCAG 8 cut(s) 329, 1755, 2086, 3059, 4102, 4167, 4485, 4816
BspFNI CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
BspHI TCATGA 1 cut(s) 2425
BspMAI CTGCAG 2 cut(s) 2245, 4975
BspMI ACCTGC 3 cut(s) 2219, 2421, 4949
BspOI GCTAGC 2 cut(s) 566, 3296
BspPI GGATC 7 cut(s) 670, 791, 2026, 3113, 3400, 4756, 5146
BspQI GCTCTTC 4 cut(s) 2279, 2553, 5009, 5283
BspT104I TTCGAA 1 cut(s) 427
BspT107I GGYRCC 1 cut(s) 1543
BspTNI GGTCTC 2 cut(s) 1759, 4489
BsrDI GCAATG 4 cut(s) 845, 2529, 3575, 5259
BsrFI RCCGGY 2 cut(s) 2586, 4673
BsrGI TGTACA 3 cut(s) 855, 1350, 3585
BsrI ACTGG 7 cut(s) 1159, 1495, 1801, 1948, 3889, 4476, 4531
BssAI RCCGGY 2 cut(s) 2586, 4673
BssNAI GTATAC 1 cut(s) 1472
BssT1I CCWWGG 6 cut(s) 549, 832, 2348, 3279, 3562, 5418
Bst1107I GTATAC 1 cut(s) 1472
Bst2UI CCWGG 3 cut(s) 1368, 1587, 4098
Bst6I CTCTTC 5 cut(s) 2187, 2279, 2553, 5009, 5283
BstAPI GCANNNNNTGC 4 cut(s) 149, 2535, 2879, 5265
BstAUI TGTACA 3 cut(s) 855, 1350, 3585
BstBI TTCGAA 1 cut(s) 427
BstENI CCTNNNNNAGG 6 cut(s) 2064, 2226, 2347, 4794, 4956, 5077
BstF5I GGATG 5 cut(s) 828, 1400, 1870, 3558, 4130
BstFNI CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
BstH2I RGCGCY 2 cut(s) 577, 3307
BstHHI GCGC 7 cut(s) 576, 724, 1845, 2716, 3306, 3454, 4575
BstMAI GTCTC 2 cut(s) 1759, 4489
BstMCI CGRYCG 2 cut(s) 2382, 5112
BstNI CCWGG 3 cut(s) 1368, 1587, 4098
BstNSI RCATGY 4 cut(s) 2377, 2594, 5107, 5324
BstPAI GACNNNNGTC 1 cut(s) 5365
BstSCI CCNGG 5 cut(s) 1333, 1366, 1585, 4063, 4096
BstSFI CTRYAG 5 cut(s) 321, 2241, 2622, 3051, 4971
BstSLI GKGCMC 1 cut(s) 206
BstUI CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
BstV2I GAAGAC 2 cut(s) 1885, 4776
BstX2I RGATCY 3 cut(s) 796, 3118, 5151
BstXI CCANNNNNNTGG 2 cut(s) 1785, 4515
BstYI RGATCY 3 cut(s) 796, 3118, 5151
BstZ17I GTATAC 1 cut(s) 1472
BtgZI GCGATG 2 cut(s) 2751, 5496
BtsCI GGATG 5 cut(s) 828, 1400, 1870, 3558, 4130
BtsI GCAGTG 7 cut(s) 468, 2013, 2250, 2461, 3198, 4980, 5191
BveI ACCTGC 3 cut(s) 2219, 2421, 4949
CaiI CAGNNNCTG 2 cut(s) 2093, 4823
CciI TCATGA 1 cut(s) 2425
CfoI GCGC 7 cut(s) 576, 724, 1845, 2716, 3306, 3454, 4575
Cfr10I RCCGGY 2 cut(s) 2586, 4673
CspCI CAANNNNNGTGG 4 cut(s) 1659, 1694, 4389, 4424
DraI TTTAAA 2 cut(s) 951, 3681
EaeI YGGCCR 1 cut(s) 3024
Eam1104I CTCTTC 5 cut(s) 2187, 2279, 2553, 5009, 5283
EarI CTCTTC 5 cut(s) 2187, 2279, 2553, 5009, 5283
Ecl136II GAGCTC 5 cut(s) 355, 2272, 2613, 3085, 5002
Eco130I CCWWGG 6 cut(s) 549, 832, 2348, 3279, 3562, 5418
Eco147I AGGCCT 2 cut(s) 2207, 4937
Eco24I GRGCYC 7 cut(s) 357, 2100, 2274, 2615, 3087, 4830, 5004
Eco31I GGTCTC 2 cut(s) 1759, 4489
Eco47I GGWCC 5 cut(s) 388, 1166, 2219, 3896, 4949
Eco47III AGCGCT 2 cut(s) 575, 3305
Eco53kI GAGCTC 5 cut(s) 355, 2272, 2613, 3085, 5002
Eco57I CTGAAG 5 cut(s) 2148, 2474, 4878, 5204, 5384
Eco88I CYCGRG 3 cut(s) 1270, 4000, 4187
EcoICRI GAGCTC 5 cut(s) 355, 2272, 2613, 3085, 5002
EcoNI CCTNNNNNAGG 6 cut(s) 2064, 2226, 2347, 4794, 4956, 5077
EcoO109I RGGNCCY 5 cut(s) 2219, 2509, 4598, 4949, 5239
EcoRI GAATTC 2 cut(s) 884, 3614
EcoRII CCWGG 3 cut(s) 1366, 1585, 4096
EcoT14I CCWWGG 6 cut(s) 549, 832, 2348, 3279, 3562, 5418
EcoT22I ATGCAT 2 cut(s) 228, 2958
EcoT38I GRGCYC 7 cut(s) 357, 2100, 2274, 2615, 3087, 4830, 5004
ErhI CCWWGG 6 cut(s) 549, 832, 2348, 3279, 3562, 5418
FalI AAGNNNNNCTT 4 cut(s) 2011, 2043, 4741, 4773
FaqI GGGAC 8 cut(s) 72, 1252, 1421, 1544, 2366, 3982, 4151, 5096
FauNDI CATATG 6 cut(s) 958, 1537, 1976, 3688, 4267, 4706
FbaI TGATCA 4 cut(s) 642, 1971, 2719, 3372
FblI GTMKAC 9 cut(s) 468, 653, 1471, 2378, 2481, 3198, 3383, 5108, 5211
FokI GGATG 5 cut(s) 815, 1407, 1857, 3545, 4137
FriOI GRGCYC 7 cut(s) 357, 2100, 2274, 2615, 3087, 4830, 5004
GlaI GCGC 7 cut(s) 575, 723, 1844, 2715, 3305, 3453, 4574
GsuI CTGGAG 7 cut(s) 1275, 1312, 1990, 4005, 4042, 4459, 4720
HaeII RGCGCY 2 cut(s) 577, 3307
HapII CCGG 6 cut(s) 1335, 2189, 2587, 4065, 4674, 4919
HhaI GCGC 7 cut(s) 576, 724, 1845, 2716, 3306, 3454, 4575
Hin6I GCGC 7 cut(s) 574, 722, 1843, 2714, 3304, 3452, 4573
HinP1I GCGC 7 cut(s) 574, 722, 1843, 2714, 3304, 3452, 4573
HincII GTYRAC 4 cut(s) 1147, 2379, 3877, 5109
HindII GTYRAC 4 cut(s) 1147, 2379, 3877, 5109
HindIII AAGCTT 6 cut(s) 264, 2020, 2130, 2994, 4750, 4860
HpaI GTTAAC 2 cut(s) 1147, 3877
HpaII CCGG 6 cut(s) 1335, 2189, 2587, 4065, 4674, 4919
HphI GGTGA 5 cut(s) 566, 2049, 2178, 3296, 4779
Hpy99I CGWCG 3 cut(s) 1446, 2147, 4877
HpyCH4IV ACGT 1 cut(s) 3060
HpySE526I ACGT 1 cut(s) 3060
HspAI GCGC 7 cut(s) 574, 722, 1843, 2714, 3304, 3452, 4573
KpnI GGTACC 1 cut(s) 1547
Ksp22I TGATCA 4 cut(s) 642, 1971, 2719, 3372
KspAI GTTAAC 2 cut(s) 1147, 3877
LguI GCTCTTC 4 cut(s) 2279, 2553, 5009, 5283
LweI GCATC 8 cut(s) 1081, 1302, 1879, 2728, 3811, 3901, 4032, 5470
MaeII ACGT 1 cut(s) 3060
MfeI CAATTG 7 cut(s) 1002, 1121, 1377, 1893, 3732, 3851, 4613
MflI RGATCY 3 cut(s) 796, 3118, 5151
MlsI TGGCCA 1 cut(s) 3026
MluI ACGCGT 2 cut(s) 969, 3699
MluNI TGGCCA 1 cut(s) 3026
MmeI TCCRAC 2 cut(s) 2625, 5355
Mox20I TGGCCA 1 cut(s) 3026
Mph1103I ATGCAT 2 cut(s) 228, 2958
MroXI GAANNNNTTC 2 cut(s) 1103, 3833
MscI TGGCCA 1 cut(s) 3026
MslI CAYNNNNRTG 5 cut(s) 1223, 2324, 2784, 3953, 5054
Msp20I TGGCCA 1 cut(s) 3026
MspI CCGG 6 cut(s) 1335, 2189, 2587, 4065, 4674, 4919
MspR9I CCNGG 5 cut(s) 1335, 1368, 1587, 4065, 4098
MunI CAATTG 7 cut(s) 1002, 1121, 1377, 1893, 3732, 3851, 4613
Mva1269I GAATGC 2 cut(s) 2732, 5477
MvaI CCWGG 3 cut(s) 1368, 1587, 4098
MvnI CGCG 6 cut(s) 971, 1392, 1458, 3166, 3701, 4122
NciI CCSGG 2 cut(s) 1335, 4065
NdeI CATATG 6 cut(s) 958, 1537, 1976, 3688, 4267, 4706
NheI GCTAGC 2 cut(s) 562, 3292
NmuCI GTSAC 7 cut(s) 73, 242, 1888, 2055, 2803, 2972, 4618
NsiI ATGCAT 2 cut(s) 228, 2958
NspI RCATGY 4 cut(s) 2377, 2594, 5107, 5324
NspV TTCGAA 1 cut(s) 427
PaeI GCATGC 1 cut(s) 2594
PagI TCATGA 1 cut(s) 2425
PaqCI CACCTGC 2 cut(s) 2219, 4949
PceI AGGCCT 2 cut(s) 2207, 4937
PciI ACATGT 2 cut(s) 2373, 5103
PciSI GCTCTTC 4 cut(s) 2279, 2553, 5009, 5283
PcsI WCGNNNNNNNCGW 4 cut(s) 433, 2645, 5302, 5375
PctI GAATGC 2 cut(s) 2732, 5477
PdmI GAANNNNTTC 2 cut(s) 1103, 3833
PflMI CCANNNNNTGG 1 cut(s) 4482
PpuMI RGGWCCY 2 cut(s) 2219, 4949
PscI ACATGT 2 cut(s) 2373, 5103
PshAI GACNNNNGTC 1 cut(s) 5365
Psp124BI GAGCTC 5 cut(s) 357, 2274, 2615, 3087, 5004
Psp5II RGGWCCY 2 cut(s) 2219, 4949
Psp6I CCWGG 3 cut(s) 1366, 1585, 4096
PspGI CCWGG 3 cut(s) 1366, 1585, 4096
PspPPI RGGWCCY 2 cut(s) 2219, 4949
PstI CTGCAG 2 cut(s) 2245, 4975
PstNI CAGNNNCTG 2 cut(s) 2093, 4823
PsuI RGATCY 3 cut(s) 796, 3118, 5151
RseI CAYNNNNRTG 5 cut(s) 1223, 2324, 2784, 3953, 5054
SacI GAGCTC 5 cut(s) 357, 2274, 2615, 3087, 5004
SalI GTCGAC 2 cut(s) 2377, 5107
SapI GCTCTTC 4 cut(s) 2279, 2553, 5009, 5283
ScaI AGTACT 4 cut(s) 711, 2582, 3441, 5312
ScrFI CCNGG 5 cut(s) 1335, 1368, 1587, 4065, 4098
SfaNI GCATC 8 cut(s) 1081, 1302, 1879, 2728, 3811, 3901, 4032, 5470
SfcI CTRYAG 5 cut(s) 321, 2241, 2622, 3051, 4971
SfuI TTCGAA 1 cut(s) 427
SinI GGWCC 5 cut(s) 388, 1166, 2219, 3896, 4949
SmiMI CAYNNNNRTG 5 cut(s) 1223, 2324, 2784, 3953, 5054
SmlI CTYRAG 7 cut(s) 197, 875, 996, 1424, 1744, 3605, 3726
SmoI CTYRAG 7 cut(s) 197, 875, 996, 1424, 1744, 3605, 3726
SpeI ACTAGT 3 cut(s) 692, 2783, 3422
SphI GCATGC 1 cut(s) 2594
SseBI AGGCCT 2 cut(s) 2207, 4937
SstI GAGCTC 5 cut(s) 357, 2274, 2615, 3087, 5004
StuI AGGCCT 2 cut(s) 2207, 4937
StyD4I CCNGG 5 cut(s) 1333, 1366, 1585, 4063, 4096
StyI CCWWGG 6 cut(s) 549, 832, 2348, 3279, 3562, 5418
TaiI ACGT 1 cut(s) 3063
TaqII GACCGA 2 cut(s) 1183, 3913
TatI WGTACW 7 cut(s) 709, 855, 1350, 2580, 3439, 3585, 5310
TauI GCSGC 1 cut(s) 5259
TseFI GTSAC 7 cut(s) 73, 242, 1888, 2055, 2803, 2972, 4618
Tsp45I GTSAC 7 cut(s) 73, 242, 1888, 2055, 2803, 2972, 4618
TspGWI ACGGA 5 cut(s) 401, 896, 2421, 3626, 5151
Van91I CCANNNNNTGG 1 cut(s) 4482
VpaK11BI GGWCC 5 cut(s) 388, 1166, 2219, 3896, 4949
XagI CCTNNNNNAGG 6 cut(s) 2064, 2226, 2347, 4794, 4956, 5077
XapI RAATTY 4 cut(s) 884, 1054, 3614, 3784
XceI RCATGY 4 cut(s) 2377, 2594, 5107, 5324
XmiI GTMKAC 9 cut(s) 468, 653, 1471, 2378, 2481, 3198, 3383, 5108, 5211
XmnI GAANNNNTTC 2 cut(s) 1103, 3833
ZrmI AGTACT 4 cut(s) 711, 2582, 3441, 5312
Zsp2I ATGCAT 2 cut(s) 228, 2958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.