Prupe.7G184100_v2.0.a1

glutamate receptor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
17849678 .. 17853851
4174 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G184100.1

Sequence Viewer

Length: 1506 bp
ATGAACAAAGCCTTGTTGCTTATGCTATTTATGGTTTTCTATAATGGTGCTTCTTCAAATGGAATTGGTGTTGGTGCTACTGCTACTACTGCAAGACCTGAAGTTGTCAACATAGGCGCGATTTTCACTTTCGATTCTGTCATTGGCAAAATTGCAAAACTTGCAATAGCCCTTGCAGTTGAAGATGTCAATTCTGATCCAGAAAATCTCAATGGAACAAAGCTGACACTTAAAATGCAGAATACCAAATCTAGTGACTTTCTGGGCATCATTGAGGCTTTGCAGTTCTTGGAGAATGACACAGTGGCCATAATTGGCCCCCAATTCTCAGCTACTGCTCATGTAATCTCACATATTGCAGATGAACTAAAAGTCCCACTATTATCATTTGCAGCAACAGACCCTACTCTGTCTCCAACTCAGTTCCCATTCTTGGTTAGGACAACAAGAAGTGACCTCTTTCAGATGACTGCAGTAGCAGACCTTGTTTTCTACTATGAGTGGAGAGATGTCATAGCAATATACGTGAATGATGATTTTGGCAGAAATGCCATTGCTGCCTTAGGGGACAAGCTAGCCGAAAAACGGCGTAAAATTTCATACAAAGTGCCTCTGAACCCCAAAGCAACAAAAGATGAAATCACCAACGCACTCATTAGTGTTTCTTCAATGGAGTCCAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTACAAGTGCTTACTGAAGCACGAAACCTCATGATGATGGCTAGTGGATATGTCTGGATTGCTACTGATTGGTTCTCTACAATAATAGATACAGATCCTTCCCTGCCTTTTATATCAACAGATGACATTCAAGGGGTTCTTACATTAAAAATGTACACACCAGAATCGGAGCACAAAAAGAAATTTAAATTGCGGTGGAGCAACTTAACTAGTTCAAGAAGAGTGAATGGCTCTTCTTTTGGGCTAAATACGTATGGTCTATATGCCTATGATTCTGTAAGGCATCTTGCTGTTGCCCTTGATTCATTTTTTGCTCGTGGGGAAAATATTTCATTTTCAAATGACTCGAACTTAAACGAGTTAGGCGGACGGAAGTTGAATCTTGATGCTTTGAACATGTTCAATGGTGGCAGCCAGCTACTCCAAAGCATTTTAGAGGTTAACACAACTGGTTTAACTAGGTCAATTAAGTTTAATCCAGATGGGAACTTGATTAATCCTGCATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGGACAATTGGTTATTGGTCCAACTCTTCTGGTTTCTCACTTGATCCACCAGAAAAGCCTCAAAGGAAGCTGCAGTCTAATGGCTCCAGCACCGGTATTCAACGACTATACAGCGTCATCTGGCCTGGACAAACAACTCAGAAGCCTCGTGGGTGGGTTTTCCCTGACAACGGAAGAAAGCTCAGGCTTGGTGTCCCAAATCGAGTTAGCTATCGTGAGTTTGTGAGGCACAGAATTCACTGGCTATTGCATTGA

Protein Analysis

502

Amino Acids

55.68

Weight (kDa)

9.07

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 715
AccII CGCG 1 cut(s) 119
AciI CCGC 2 cut(s) 907, 1080
AclWI GGATC 4 cut(s) 191, 682, 803, 1289
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 3 cut(s) 594, 896, 1485
AcuI CTGAAG 2 cut(s) 120, 750
AfaI GTAC 1 cut(s) 869
AfiI CCNNNNNNNGG 3 cut(s) 433, 585, 1421
AflIII ACRYGT 1 cut(s) 1110
AgeI ACCGGT 1 cut(s) 1343
AhlI ACTAGT 2 cut(s) 704, 923
AjnI CCWGG 2 cut(s) 677, 1375
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
AluBI AGCT 7 cut(s) 223, 332, 574, 1132, 1321, 1432, 1461
AluI AGCT 7 cut(s) 223, 332, 574, 1132, 1321, 1432, 1461
Alw21I GWGCWC 1 cut(s) 888
Alw26I GTCTC 1 cut(s) 417
AlwI GGATC 4 cut(s) 191, 682, 803, 1289
AlwNI CAGNNNCTG 1 cut(s) 335
AoxI GGCC 3 cut(s) 306, 316, 1373
ApeKI GCWGC 4 cut(s) 392, 557, 1125, 1321
ApoI RAATTY 3 cut(s) 594, 896, 1485
AseI ATTAAT 1 cut(s) 1209
AsiGI ACCGGT 1 cut(s) 1343
Asp700I GAANNNNTTC 1 cut(s) 1112
AspLEI GCGC 1 cut(s) 119
AspS9I GGNCC 2 cut(s) 317, 1269
AsuHPI GGTGA 1 cut(s) 634
AsuNHI GCTAGC 1 cut(s) 574
AvaII GGWCC 1 cut(s) 1269
AxyI CCTNAGG 1 cut(s) 562
BalI TGGCCA 1 cut(s) 308
BauI CACGAG 2 cut(s) 1029, 1398
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 4 cut(s) 404, 544, 1137, 1308
BccI CCATC 2 cut(s) 745, 1190
BceAI ACGGC 1 cut(s) 602
BciT130I CCWGG 2 cut(s) 679, 1377
BcoDI GTCTC 1 cut(s) 417
BcuI ACTAGT 2 cut(s) 704, 923
BfaI CTAG 7 cut(s) 252, 575, 705, 756, 924, 1173, 1251
BfmI CTRYAG 2 cut(s) 471, 1322
BisI GCNGC 4 cut(s) 393, 558, 1126, 1322
BlsI GCNGC 4 cut(s) 394, 559, 1127, 1323
Bme1390I CCNGG 2 cut(s) 679, 1377
Bme18I GGWCC 1 cut(s) 1269
BmgT120I GGNCC 2 cut(s) 317, 1269
BmiI GGNNCC 2 cut(s) 319, 1336
BmrFI CCNGG 2 cut(s) 679, 1377
BmsI GCATC 3 cut(s) 276, 1006, 1090
BmtI GCTAGC 1 cut(s) 578
BpmI CTGGAG 1 cut(s) 1321
Bpu10I CCTNAGC 1 cut(s) 1433
BsaAI YACGTR 2 cut(s) 526, 966
BsaBI GATNNNNATC 2 cut(s) 686, 807
BsaWI WCCGGW 1 cut(s) 1343
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 3 cut(s) 433, 585, 1421
Bse118I RCCGGY 1 cut(s) 1343
Bse1I ACTGG 2 cut(s) 1168, 1496
Bse21I CCTNAGG 1 cut(s) 562
Bse3DI GCAATG 1 cut(s) 552
Bse8I GATNNNNATC 2 cut(s) 686, 807
BseBI CCWGG 2 cut(s) 679, 1377
BseJI GATNNNNATC 2 cut(s) 686, 807
BseLI CCNNNNNNNGG 3 cut(s) 433, 585, 1421
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 4 cut(s) 342, 434, 1403, 1447
BseNI ACTGG 2 cut(s) 1168, 1496
BseXI GCAGC 4 cut(s) 404, 544, 1137, 1308
BsgI GTGCAG 1 cut(s) 677
Bsh1236I CGCG 1 cut(s) 119
BshFI GGCC 3 cut(s) 308, 318, 1375
BshTI ACCGGT 1 cut(s) 1343
BsiHKAI GWGCWC 1 cut(s) 888
BsiSI CCGG 1 cut(s) 1344
BslFI GGGAC 4 cut(s) 359, 581, 1261, 1430
BslI CCNNNNNNNGG 3 cut(s) 433, 585, 1421
BsmAI GTCTC 1 cut(s) 417
BsmFI GGGAC 4 cut(s) 359, 581, 1261, 1430
BsnI GGCC 3 cut(s) 308, 318, 1375
Bsp1286I GDGCHC 1 cut(s) 888
Bsp1407I TGTACA 1 cut(s) 867
Bsp143I GATC 4 cut(s) 196, 687, 808, 1294
BspACI CCGC 2 cut(s) 907, 1080
BspANI GGCC 3 cut(s) 308, 318, 1375
BspCNI CTCAG 4 cut(s) 341, 433, 1402, 1446
BspFNI CGCG 1 cut(s) 119
BspHI TCATGA 1 cut(s) 744
BspLI GGNNCC 2 cut(s) 319, 1336
BspMAI CTGCAG 2 cut(s) 475, 1326
BspOI GCTAGC 1 cut(s) 578
BspPI GGATC 4 cut(s) 191, 682, 803, 1289
BspQI GCTCTTC 1 cut(s) 952
BsrDI GCAATG 1 cut(s) 552
BsrFI RCCGGY 1 cut(s) 1343
BsrGI TGTACA 1 cut(s) 867
BsrI ACTGG 2 cut(s) 1168, 1496
BssAI RCCGGY 1 cut(s) 1343
BssMI GATC 4 cut(s) 196, 687, 808, 1294
BssSI CACGAG 2 cut(s) 1029, 1398
Bst2BI CACGAG 2 cut(s) 1029, 1398
Bst2UI CCWGG 2 cut(s) 679, 1377
Bst4CI ACNGT 1 cut(s) 304
Bst6I CTCTTC 3 cut(s) 928, 952, 1282
BstAPI GCANNNNNTGC 1 cut(s) 161
BstAUI TGTACA 1 cut(s) 867
BstBAI YACGTR 2 cut(s) 526, 966
BstC8I GCNNGC 2 cut(s) 576, 1130
BstDEI CTNAG 5 cut(s) 328, 420, 562, 1389, 1433
BstFNI CGCG 1 cut(s) 119
BstHHI GCGC 1 cut(s) 119
BstKTI GATC 4 cut(s) 199, 690, 811, 1297
BstMAI GTCTC 1 cut(s) 417
BstMBI GATC 4 cut(s) 196, 687, 808, 1294
BstMWI GCNNNNNNNGC 3 cut(s) 89, 161, 557
BstNI CCWGG 2 cut(s) 679, 1377
BstNSI RCATGY 1 cut(s) 1114
BstSCI CCNGG 2 cut(s) 677, 1375
BstSFI CTRYAG 2 cut(s) 471, 1322
BstSNI TACGTA 1 cut(s) 966
BstUI CGCG 1 cut(s) 119
BstV1I GCAGC 4 cut(s) 404, 544, 1137, 1308
BstX2I RGATCY 1 cut(s) 808
BstYI RGATCY 1 cut(s) 808
Bsu36I CCTNAGG 1 cut(s) 562
BsuRI GGCC 3 cut(s) 308, 318, 1375
BtsIMutI CAGTG 2 cut(s) 309, 1489
Cac8I GCNNGC 2 cut(s) 576, 1130
CaiI CAGNNNCTG 1 cut(s) 335
CciI TCATGA 1 cut(s) 744
CfoI GCGC 1 cut(s) 119
Cfr10I RCCGGY 1 cut(s) 1343
Cfr13I GGNCC 2 cut(s) 317, 1269
CseI GACGC 1 cut(s) 1354
Csp6I GTAC 1 cut(s) 868
CspAI ACCGGT 1 cut(s) 1343
CviAII CATG 3 cut(s) 341, 745, 1111
CviQI GTAC 1 cut(s) 868
DdeI CTNAG 5 cut(s) 328, 420, 562, 1389, 1433
DpnI GATC 4 cut(s) 198, 689, 810, 1296
DpnII GATC 4 cut(s) 196, 687, 808, 1294
DraI TTTAAA 1 cut(s) 901
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 3 cut(s) 928, 952, 1282
EarI CTCTTC 3 cut(s) 928, 952, 1282
EciI GGCGGA 1 cut(s) 1095
Eco105I TACGTA 1 cut(s) 966
Eco47I GGWCC 1 cut(s) 1269
Eco57I CTGAAG 2 cut(s) 120, 750
Eco81I CCTNAGG 1 cut(s) 562
EcoRI GAATTC 1 cut(s) 1485
EcoRII CCWGG 2 cut(s) 677, 1375
FaeI CATG 3 cut(s) 344, 748, 1114
FalI AAGNNNNNCTT 2 cut(s) 837, 869
FaqI GGGAC 4 cut(s) 359, 581, 1261, 1430
FatI CATG 3 cut(s) 340, 744, 1110
FblI GTMKAC 1 cut(s) 715
Fnu4HI GCNGC 4 cut(s) 393, 558, 1126, 1322
Fsp4HI GCNGC 4 cut(s) 393, 558, 1126, 1322
FspBI CTAG 7 cut(s) 252, 575, 705, 756, 924, 1173, 1251
GlaI GCGC 1 cut(s) 118
GluI GCNGC 4 cut(s) 393, 558, 1126, 1322
GsuI CTGGAG 1 cut(s) 1321
HaeIII GGCC 3 cut(s) 308, 318, 1375
HapII CCGG 1 cut(s) 1344
HgaI GACGC 1 cut(s) 1354
HhaI GCGC 1 cut(s) 119
Hin1II CATG 3 cut(s) 344, 748, 1114
Hin6I GCGC 1 cut(s) 117
HinP1I GCGC 1 cut(s) 117
HincII GTYRAC 2 cut(s) 109, 1156
HindII GTYRAC 2 cut(s) 109, 1156
HinfI GANTC 8 cut(s) 134, 674, 682, 878, 986, 1016, 1058, 1093
HpaI GTTAAC 1 cut(s) 1156
HpaII CCGG 1 cut(s) 1344
HphI GGTGA 1 cut(s) 634
Hpy166II GTNNAC 4 cut(s) 109, 716, 870, 1156
Hpy188I TCNGA 6 cut(s) 196, 465, 615, 687, 883, 1392
Hpy188III TCNNGA 7 cut(s) 200, 745, 769, 930, 1097, 1193, 1466
Hpy8I GTNNAC 4 cut(s) 109, 716, 870, 1156
HpyAV CCTTC 1 cut(s) 822
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4IV ACGT 2 cut(s) 525, 965
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 161, 557
HpyF3I CTNAG 5 cut(s) 328, 420, 562, 1389, 1433
HpySE526I ACGT 2 cut(s) 525, 965
Hsp92II CATG 3 cut(s) 344, 748, 1114
HspAI GCGC 1 cut(s) 117
KspAI GTTAAC 1 cut(s) 1156
Kzo9I GATC 4 cut(s) 196, 687, 808, 1294
LguI GCTCTTC 1 cut(s) 952
LmnI GCTCC 3 cut(s) 883, 912, 1340
Lsp1109I GCAGC 4 cut(s) 404, 544, 1137, 1308
LweI GCATC 3 cut(s) 276, 1006, 1090
MaeI CTAG 7 cut(s) 252, 575, 705, 756, 924, 1173, 1251
MaeII ACGT 2 cut(s) 525, 965
MaeIII GTNAC 2 cut(s) 254, 452
MalI GATC 4 cut(s) 198, 689, 810, 1296
MboI GATC 4 cut(s) 196, 687, 808, 1294
MboII GAAGA 7 cut(s) 45, 194, 657, 939, 945, 1269, 1437
MfeI CAATTG 1 cut(s) 1257
MflI RGATCY 1 cut(s) 808
MhlI GDGCHC 1 cut(s) 888
MlsI TGGCCA 1 cut(s) 308
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 2 cut(s) 683, 1052
MmeI TCCRAC 2 cut(s) 440, 1296
MnlI CCTC 8 cut(s) 268, 467, 621, 752, 1144, 1320, 1407, 1470
Mox20I TGGCCA 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 1112
MscI TGGCCA 1 cut(s) 308
MslI CAYNNNNRTG 2 cut(s) 749, 1232
Msp20I TGGCCA 1 cut(s) 308
MspI CCGG 1 cut(s) 1344
MspR9I CCNGG 2 cut(s) 679, 1377
MunI CAATTG 1 cut(s) 1257
MvaI CCWGG 2 cut(s) 679, 1377
MvnI CGCG 1 cut(s) 119
MwoI GCNNNNNNNGC 3 cut(s) 89, 161, 557
NdeII GATC 4 cut(s) 196, 687, 808, 1294
NheI GCTAGC 1 cut(s) 574
NlaIII CATG 3 cut(s) 344, 748, 1114
NlaIV GGNNCC 2 cut(s) 319, 1336
NmuCI GTSAC 2 cut(s) 254, 452
NspI RCATGY 1 cut(s) 1114
PagI TCATGA 1 cut(s) 744
PciI ACATGT 1 cut(s) 1110
PciSI GCTCTTC 1 cut(s) 952
PdmI GAANNNNTTC 1 cut(s) 1112
PfeI GAWTC 6 cut(s) 134, 682, 878, 986, 1016, 1093
PfoI TCCNGGA 1 cut(s) 677
PinAI ACCGGT 1 cut(s) 1343
PkrI GCNGC 4 cut(s) 394, 559, 1127, 1323
PleI GAGTC 2 cut(s) 682, 1052
PpsI GAGTC 2 cut(s) 682, 1052
Ppu21I YACGTR 2 cut(s) 526, 966
PscI ACATGT 1 cut(s) 1110
PshBI ATTAAT 1 cut(s) 1209
Psp6I CCWGG 2 cut(s) 677, 1375
PspGI CCWGG 2 cut(s) 677, 1375
PspN4I GGNNCC 2 cut(s) 319, 1336
PspPI GGNCC 2 cut(s) 317, 1269
PstI CTGCAG 2 cut(s) 475, 1326
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 1 cut(s) 808
RsaI GTAC 1 cut(s) 869
RsaNI GTAC 1 cut(s) 868
RseI CAYNNNNRTG 2 cut(s) 749, 1232
SapI GCTCTTC 1 cut(s) 952
SatI GCNGC 4 cut(s) 393, 558, 1126, 1322
Sau3AI GATC 4 cut(s) 196, 687, 808, 1294
Sau96I GGNCC 2 cut(s) 317, 1269
SchI GAGTC 2 cut(s) 683, 1052
ScrFI CCNGG 2 cut(s) 679, 1377
SduI GDGCHC 1 cut(s) 888
SfaNI GCATC 3 cut(s) 276, 1006, 1090
SfcI CTRYAG 2 cut(s) 471, 1322
SinI GGWCC 1 cut(s) 1269
SmiI ATTTAAAT 1 cut(s) 901
SmiMI CAYNNNNRTG 2 cut(s) 749, 1232
SnaBI TACGTA 1 cut(s) 966
SpeI ACTAGT 2 cut(s) 704, 923
SsiI CCGC 2 cut(s) 907, 1080
SspI AATATT 1 cut(s) 1042
SspMI CTAG 7 cut(s) 252, 575, 705, 756, 924, 1173, 1251
StyD4I CCNGG 2 cut(s) 677, 1375
SwaI ATTTAAAT 1 cut(s) 901
TaaI ACNGT 1 cut(s) 304
TaiI ACGT 2 cut(s) 528, 968
TaqI TCGA 3 cut(s) 132, 1061, 1453
TatI WGTACW 1 cut(s) 867
TfiI GAWTC 6 cut(s) 134, 682, 878, 986, 1016, 1093
TscAI CASTG 2 cut(s) 309, 1496
TseFI GTSAC 2 cut(s) 254, 452
TseI GCWGC 4 cut(s) 392, 557, 1125, 1321
Tsp45I GTSAC 2 cut(s) 254, 452
TspDTI ATGAA 6 cut(s) 17, 378, 588, 651, 1008, 1035
TspGWI ACGGA 2 cut(s) 1099, 1437
TspRI CASTG 2 cut(s) 309, 1496
VpaK11BI GGWCC 1 cut(s) 1269
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 3 cut(s) 594, 896, 1485
XceI RCATGY 1 cut(s) 1114
XmiI GTMKAC 1 cut(s) 715
XmnI GAANNNNTTC 1 cut(s) 1112
XspI CTAG 7 cut(s) 252, 575, 705, 756, 924, 1173, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.