Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

41197027 .. 41201079

Gene Structure 4053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029615

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGAATATAGCCTTGCTTCTGCTTTTTTGGGTTTTCTGTAAGGGTTCTCATACCAGTGGACTCATTACTAATGTCACTACAAGACCTGATGTATTGAACATTGGTTCGATGATCACTTTCGATTCTGTCATTGGGAAAATTGCAAAACTTGCCATAACACTTGCGGTTGAAGATGTCAATTCCAATCCCAACATTCTCAATGGCACAAAGCTCTCACTCAAAATGCATAACACCAAATCGAGTGACTTCCTCGGAATCGTGGAAGCTTTGCAGTTTATGGAGAATGACACAGTGGCCATAATTGGCCCCCAATTCTCAACTACAGCTCATGTTATCTCACACATAGCAAATGAGCTCCAAGTGCCTTTGTTATCATTTGCAGCAACAGACCCTACTCTATCTCCTGTTCAGTTCCCTTTCTTTGTTCGAACAACGCGAAGCGATCTCTTTCAGATGACAGCAGTGGTAGACCTTGTTGTTCACTACCAGTGGAGAGATGTCATAGCAATATATGTAGATGACGATTTTGGAAGAAATGCTATTGCTTCCTTGGGTGATAAGCTAGCCGAAAAGCGCTGCAAGATTTCATACAAAGTGCCTTTGACTCCCACAGCAACAAAAGATGAGATCAGAAAGGCACTGATCAGTGTGTCTACAATGGAATCTAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTACTTGAAGAAGCGCAGGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACTGATCCTTCTCTCCCTCTAGTGCAAACAAACAACATCCAAGGCGTTCTCACATTGCGAATGTACACACCTGATTCACAACTGAAGACTGAATTCAAGTCGAGATGGAGCAACTTGACTAGGGCAAGAAGATTACTTAATAACACTTCTTTTGGGTTAAATACATATGGCCTATACGCGTATGATTCGGTGTTGCTTCTTGCTCAAGCAATCGAATCATTTTTCGCTATTGGGTGGAATATTTCCTTTTCAAATGACACAAATTTGAGGGAGTTAAGTGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAAGCATTTTAGAGGTTAACACAACTGGCTTAACAGGGCCAATTAAGTTTGATGCAGATGGGAACTTACTCAATCCTGCATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGAACTATTGGCTATTGGTCTAACTCCTCGGGTTTAAATGTTCTTCCTCCAGAAAAGCTCCAAATGAAGATGCAGACTAATGGCTCCAGCGCCGGTACTCAAAAACTGTACAGTGTGCTCTGGCCTGGACAAACAACTGTGAAGCCTCGCGGATGGGTTTTCCCTTTCAATGGCAGAAAGCTCAGGATTGGAGTCCCCCATCGAGTTAGCTACCCCGAGTTTGTGGGTATAAAAGGCACTGATTTCATTGGTTACTGCATTGAGGTTTTTCAGGCTGCACTAAATGAGTTACCATATGGTGTGCCATACAAGTATGTCCCTTTTGGAGATGGTATCAAAAACCCAGAAAACAATGACCTTCTGCACAGAGTCCAAATTGGGTGGTTAATTCCATATGCCCAAATACAACATGTCAGATGCAAATCTTGGGTTTTACGGTCTGGCAACAAAACGTTTTGTATATGGGTAAATCTTGTTTATATAACATCCCTTTTTCATGGTGTTTATGCAGAAGAGAAAACTGGCAGCACACTTGGTCGCTTTGTGGTAATCATATGGCTATTTGTGGTATTAATACTCAACTCCAGCTACACTGCAAGCTTGACTTCGATCCTCACAGTGGAGCAACTTTCTTCACCTGTGAAAGGGATTGAAAGTTTAGTGACAGGCACTGAGCCGATTGGTTATCTAAGGGGTTCCTTTGTTGAAGCTTACTTAACCGACGAGCTAAACATACATCATAGCAGACTTGTTGCCCTTAACTCGCCGGAAGATTATGAGAAGGCCTTGAAGAAAGGTCCTAGTGCAGGTGGTGTTGCTGCGGTGATTGATGAGCGTGCTTACATGGAGCTCTTCCTCTCTAGTCGATGTGGATATAGTATTGTTGGTCAAGAGTTCACTAAAATGGGTTGGGGATTTGCCTTTTCGAGGGACTCCCCATTGGCAATCGACATGTCGACCGCCATATTGAAGCTATCGGAGAACGGAAACCTCCAAAAGATACATGACAAGTGGCTAATGAAAAGTGCTTGCAGTGCAGAAGGAGAAAAGCAAGCAGTAGACCGCCTTCAACTAAAGAGCTTTTGGGGCCTCTTTCTACTAAGCGGCATTGCTTGCTTTCTTGCTCTTCTTCTTTACGTTCTTCGCATGGTTCGACACTACTACCGGCATGCAGATTCCGACATCGAGTGCTCGCAATCAATAGGACGACTGAAGTCATTTGTTTCGTTTGTAAATAAGAGGGAACAAGAAGTGAAAATCATGAAAAGCAGTTCCAAGAGAAGAAGGACTGATAACAAATCCTCAAATAAGATAGTGCATCATCAAGAATGCAGTAGCGATGGTTTGGATGAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

867

Amino Acids

96.69

Weight (kDa)

8.54

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	45 - 337	9.6e-13	Periplasmic binding protein
ANF_receptor	PF01094	49 - 411	5.5e-91	Receptor family ligand binding region
Lig_chan	PF00060	562 - 786	2e-22	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2039
Acc36I	ACCTGC	1 cut(s)	2039
AccI	GTMKAC	4 cut(s)	468, 653, 2198, 2301
AccII	CGCG	3 cut(s)	436, 971, 1392
AciI	CCGC	6 cut(s)	164, 1392, 2063, 2202, 2305, 2346
AclI	AACGTT	1 cut(s)	1694
AclWI	GGATC	3 cut(s)	670, 791, 1846
AcoI	YGGCCR	1 cut(s)	294
AcsI	RAATTY	2 cut(s)	884, 1054
AcuI	CTGAAG	2 cut(s)	896, 2474
AfaI	GTAC	4 cut(s)	711, 857, 1339, 1352
AfeI	AGCGCT	1 cut(s)	575
AfiI	CCNNNNNNNGG	5 cut(s)	1412, 1861, 1886, 2048, 2169
AflIII	ACRYGT	3 cut(s)	969, 1651, 2193
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	1 cut(s)	1366
Alw21I	GWGCWC	4 cut(s)	357, 1362, 2094, 2435
AlwI	GGATC	3 cut(s)	670, 791, 1846
AlwNI	CAGNNNCTG	1 cut(s)	1913
Ama87I	CYCGRG	2 cut(s)	1270, 1457
Aor51HI	AGCGCT	1 cut(s)	575
AoxI	GGCC	7 cut(s)	294, 304, 961, 1166, 1364, 2025, 2329
ApeKI	GCWGC	5 cut(s)	380, 576, 1517, 1767, 2060
ApoI	RAATTY	2 cut(s)	884, 1054
AseI	ATTAAT	1 cut(s)	1814
Asp700I	GAANNNNTTC	1 cut(s)	1103
AspLEI	GCGC	3 cut(s)	576, 724, 1334
AspS9I	GGNCC	4 cut(s)	305, 1166, 2039, 2329
AsuHPI	GGTGA	3 cut(s)	566, 1869, 2077
AsuII	TTCGAA	1 cut(s)	427
AsuNHI	GCTAGC	1 cut(s)	562
AvaI	CYCGRG	2 cut(s)	1270, 1457
AvaII	GGWCC	1 cut(s)	2039
BalI	TGGCCA	1 cut(s)	296
BanII	GRGCYC	2 cut(s)	357, 2094
BarI	GAAGNNNNNNTAC	2 cut(s)	2292, 2324
BbsI	GAAGAC	1 cut(s)	884
Bbv12I	GWGCWC	4 cut(s)	357, 1362, 2094, 2435
BbvI	GCAGC	5 cut(s)	392, 563, 1504, 1779, 2047
BccI	CCATC	7 cut(s)	733, 891, 1181, 1389, 1449, 1565, 2576
BciT130I	CCWGG	1 cut(s)	1368
BclI	TGATCA	2 cut(s)	111, 642
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	8 cut(s)	563, 666, 693, 812, 912, 1242, 2043, 2103
BfmI	CTRYAG	1 cut(s)	321
BfoI	RGCGCY	2 cut(s)	577, 1335
BfuAI	ACCTGC	1 cut(s)	2039
BisI	GCNGC	6 cut(s)	381, 577, 1518, 1768, 2061, 2347
BlsI	GCNGC	6 cut(s)	382, 578, 1519, 1769, 2062, 2348
BmcAI	AGTACT	1 cut(s)	711
Bme1390I	CCNGG	1 cut(s)	1368
Bme18I	GGWCC	1 cut(s)	2039
BmeT110I	CYCGRG	2 cut(s)	1270, 1457
BmgT120I	GGNCC	4 cut(s)	305, 1166, 2039, 2329
BmiI	GGNNCC	4 cut(s)	307, 1327, 1939, 2330
BmrFI	CCNGG	1 cut(s)	1368
BmsI	GCATC	5 cut(s)	1081, 1171, 1302, 1649, 2569
BmtI	GCTAGC	1 cut(s)	566
BoxI	GACNNNNGTC	1 cut(s)	2455
BpiI	GAAGAC	1 cut(s)	884
BpmI	CTGGAG	3 cut(s)	1275, 1312, 1810
Bpu10I	CCTNAGC	1 cut(s)	1424
Bpu14I	TTCGAA	1 cut(s)	427
BpuEI	CTTGAG	1 cut(s)	981
BsaBI	GATNNNNATC	3 cut(s)	674, 795, 1663
BsaJI	CCNNGG	4 cut(s)	250, 549, 832, 1269
BsaXI	ACNNNNNCTCC	2 cut(s)	385, 415
Bsc4I	CCNNNNNNNGG	5 cut(s)	1412, 1861, 1886, 2048, 2169
Bse118I	RCCGGY	2 cut(s)	1334, 2406
Bse1I	ACTGG	4 cut(s)	54, 487, 1159, 1768
Bse3DI	GCAATG	2 cut(s)	845, 2349
Bse8I	GATNNNNATC	3 cut(s)	674, 795, 1663
BseBI	CCWGG	1 cut(s)	1368
BseDI	CCNNGG	4 cut(s)	250, 549, 832, 1269
BseGI	GGATG	4 cut(s)	828, 1400, 1727, 2596
BseJI	GATNNNNATC	3 cut(s)	674, 795, 1663
BseLI	CCNNNNNNNGG	5 cut(s)	1412, 1861, 1886, 2048, 2169
BseMI	GCAATG	2 cut(s)	845, 2349
BseMII	CTCAG	2 cut(s)	1438, 1905
BseNI	ACTGG	4 cut(s)	54, 487, 1159, 1768
BseRI	GAGGAG	1 cut(s)	1258
BseXI	GCAGC	5 cut(s)	392, 563, 1504, 1779, 2047
BsgI	GTGCAG	5 cut(s)	665, 1503, 1589, 2067, 2298
Bsh1236I	CGCG	3 cut(s)	436, 971, 1392
Bsh1285I	CGRYCG	1 cut(s)	2202
BshFI	GGCC	7 cut(s)	296, 306, 963, 1168, 1366, 2027, 2331
BsiEI	CGRYCG	1 cut(s)	2202
BsiHKAI	GWGCWC	4 cut(s)	357, 1362, 2094, 2435
BsiHKCI	CYCGRG	2 cut(s)	1270, 1457
BsiSI	CCGG	3 cut(s)	1335, 2009, 2407
BslFI	GGGAC	4 cut(s)	1252, 1421, 1544, 2186
BslI	CCNNNNNNNGG	5 cut(s)	1412, 1861, 1886, 2048, 2169
BsmFI	GGGAC	4 cut(s)	1252, 1421, 1544, 2186
BsmI	GAATGC	1 cut(s)	2576
BsnI	GGCC	7 cut(s)	296, 306, 963, 1168, 1366, 2027, 2331
BsoBI	CYCGRG	2 cut(s)	1270, 1457
Bsp119I	TTCGAA	1 cut(s)	427
Bsp1286I	GDGCHC	4 cut(s)	357, 1362, 2094, 2435
Bsp1407I	TGTACA	2 cut(s)	855, 1350
Bsp143I	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
BspACI	CCGC	6 cut(s)	164, 1392, 2063, 2202, 2305, 2346
BspANI	GGCC	7 cut(s)	296, 306, 963, 1168, 1366, 2027, 2331
BspCNI	CTCAG	2 cut(s)	1437, 1906
BspFNI	CGCG	3 cut(s)	436, 971, 1392
BspHI	TCATGA	1 cut(s)	2502
BspLI	GGNNCC	4 cut(s)	307, 1327, 1939, 2330
BspMI	ACCTGC	1 cut(s)	2039
BspOI	GCTAGC	1 cut(s)	566
BspPI	GGATC	3 cut(s)	670, 791, 1846
BspQI	GCTCTTC	2 cut(s)	2099, 2373
BspT104I	TTCGAA	1 cut(s)	427
BsrDI	GCAATG	2 cut(s)	845, 2349
BsrFI	RCCGGY	2 cut(s)	1334, 2406
BsrGI	TGTACA	2 cut(s)	855, 1350
BsrI	ACTGG	4 cut(s)	54, 487, 1159, 1768
BssAI	RCCGGY	2 cut(s)	1334, 2406
BssECI	CCNNGG	4 cut(s)	250, 549, 832, 1269
BssMI	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
BssT1I	CCWWGG	2 cut(s)	549, 832
Bst2UI	CCWGG	1 cut(s)	1368
Bst4CI	ACNGT	6 cut(s)	292, 1350, 1355, 1381, 1680, 1861
Bst6I	CTCTTC	3 cut(s)	1749, 2099, 2373
BstAPI	GCANNNNNTGC	2 cut(s)	149, 2355
BstAUI	TGTACA	2 cut(s)	855, 1350
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	9 cut(s)	564, 1118, 1840, 2079, 2272, 2295, 2356, 2412, 2435
BstDEI	CTNAG	4 cut(s)	1424, 1914, 1931, 2342
BstENI	CCTNNNNNAGG	3 cut(s)	1884, 2046, 2167
BstF5I	GGATG	4 cut(s)	828, 1400, 1727, 2596
BstFNI	CGCG	3 cut(s)	436, 971, 1392
BstH2I	RGCGCY	2 cut(s)	577, 1335
BstHHI	GCGC	3 cut(s)	576, 724, 1334
BstKTI	GATC	7 cut(s)	114, 445, 630, 645, 678, 799, 1854
BstMBI	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
BstMCI	CGRYCG	1 cut(s)	2202
BstMWI	GCNNNNNNNGC	5 cut(s)	149, 361, 2276, 2328, 2355
BstNI	CCWGG	1 cut(s)	1368
BstNSI	RCATGY	3 cut(s)	1655, 2197, 2414
BstPAI	GACNNNNGTC	1 cut(s)	2455
BstSCI	CCNGG	1 cut(s)	1366
BstSFI	CTRYAG	1 cut(s)	321
BstUI	CGCG	3 cut(s)	436, 971, 1392
BstV1I	GCAGC	5 cut(s)	392, 563, 1504, 1779, 2047
BstV2I	GAAGAC	1 cut(s)	884
BsuRI	GGCC	7 cut(s)	296, 306, 963, 1168, 1366, 2027, 2331
BtgZI	GCGATG	1 cut(s)	2595
BtsCI	GGATG	4 cut(s)	828, 1400, 1727, 2596
BtsI	GCAGTG	3 cut(s)	468, 1833, 2281
BveI	ACCTGC	1 cut(s)	2039
Cac8I	GCNNGC	9 cut(s)	564, 1118, 1840, 2079, 2272, 2295, 2356, 2412, 2435
CaiI	CAGNNNCTG	1 cut(s)	1913
CciI	TCATGA	1 cut(s)	2502
CfoI	GCGC	3 cut(s)	576, 724, 1334
Cfr10I	RCCGGY	2 cut(s)	1334, 2406
Cfr13I	GGNCC	4 cut(s)	305, 1166, 2039, 2329
Csp6I	GTAC	4 cut(s)	710, 856, 1338, 1351
CspCI	CAANNNNNGTGG	2 cut(s)	1604, 1639
CviAII	CATG	9 cut(s)	329, 1652, 1739, 2086, 2194, 2246, 2389, 2411, 2503
CviQI	GTAC	4 cut(s)	710, 856, 1338, 1351
DdeI	CTNAG	4 cut(s)	1424, 1914, 1931, 2342
DpnI	GATC	7 cut(s)	113, 444, 629, 644, 677, 798, 1853
DpnII	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
DraI	TTTAAA	1 cut(s)	1278
EaeI	YGGCCR	1 cut(s)	294
Eam1104I	CTCTTC	3 cut(s)	1749, 2099, 2373
EarI	CTCTTC	3 cut(s)	1749, 2099, 2373
Ecl136II	GAGCTC	2 cut(s)	355, 2092
Eco130I	CCWWGG	2 cut(s)	549, 832
Eco147I	AGGCCT	1 cut(s)	2027
Eco24I	GRGCYC	2 cut(s)	357, 2094
Eco47I	GGWCC	1 cut(s)	2039
Eco47III	AGCGCT	1 cut(s)	575
Eco53kI	GAGCTC	2 cut(s)	355, 2092
Eco57I	CTGAAG	2 cut(s)	896, 2474
Eco88I	CYCGRG	2 cut(s)	1270, 1457
EcoICRI	GAGCTC	2 cut(s)	355, 2092
EcoNI	CCTNNNNNAGG	3 cut(s)	1884, 2046, 2167
EcoO109I	RGGNCCY	2 cut(s)	2039, 2329
EcoRI	GAATTC	1 cut(s)	884
EcoRII	CCWGG	1 cut(s)	1366
EcoT14I	CCWWGG	2 cut(s)	549, 832
EcoT22I	ATGCAT	1 cut(s)	228
EcoT38I	GRGCYC	2 cut(s)	357, 2094
ErhI	CCWWGG	2 cut(s)	549, 832
FaeI	CATG	9 cut(s)	332, 1655, 1742, 2089, 2197, 2249, 2392, 2414, 2506
FalI	AAGNNNNNCTT	2 cut(s)	1831, 1863
FaqI	GGGAC	4 cut(s)	1252, 1421, 1544, 2186
FatI	CATG	9 cut(s)	328, 1651, 1738, 2085, 2193, 2245, 2388, 2410, 2502
FauNDI	CATATG	4 cut(s)	958, 1537, 1636, 1796
FbaI	TGATCA	2 cut(s)	111, 642
FblI	GTMKAC	4 cut(s)	468, 653, 2198, 2301
Fnu4HI	GCNGC	6 cut(s)	381, 577, 1518, 1768, 2061, 2347
FokI	GGATG	3 cut(s)	815, 1407, 1714
FriOI	GRGCYC	2 cut(s)	357, 2094
Fsp4HI	GCNGC	6 cut(s)	381, 577, 1518, 1768, 2061, 2347
FspBI	CTAG	8 cut(s)	563, 666, 693, 812, 912, 1242, 2043, 2103
GlaI	GCGC	3 cut(s)	575, 723, 1333
GluI	GCNGC	6 cut(s)	381, 577, 1518, 1768, 2061, 2347
GsuI	CTGGAG	3 cut(s)	1275, 1312, 1810
HaeII	RGCGCY	2 cut(s)	577, 1335
HaeIII	GGCC	7 cut(s)	296, 306, 963, 1168, 1366, 2027, 2331
HapII	CCGG	3 cut(s)	1335, 2009, 2407
HhaI	GCGC	3 cut(s)	576, 724, 1334
Hin1II	CATG	9 cut(s)	332, 1655, 1742, 2089, 2197, 2249, 2392, 2414, 2506
Hin6I	GCGC	3 cut(s)	574, 722, 1332
HinP1I	GCGC	3 cut(s)	574, 722, 1332
HincII	GTYRAC	2 cut(s)	1147, 2199
HindII	GTYRAC	2 cut(s)	1147, 2199
HindIII	AAGCTT	3 cut(s)	264, 1840, 1950
HpaI	GTTAAC	1 cut(s)	1147
HpaII	CCGG	3 cut(s)	1335, 2009, 2407
HphI	GGTGA	3 cut(s)	566, 1869, 2077
Hpy166II	GTNNAC	9 cut(s)	59, 469, 481, 654, 858, 1147, 2139, 2199, 2302
Hpy188I	TCNGA	7 cut(s)	254, 453, 632, 675, 1658, 2221, 2422
Hpy188III	TCNNGA	7 cut(s)	894, 1088, 1292, 1426, 2132, 2503, 2567
Hpy8I	GTNNAC	9 cut(s)	59, 469, 481, 654, 858, 1147, 2139, 2199, 2302
Hpy99I	CGWCG	1 cut(s)	1967
HpyAV	CCTTC	6 cut(s)	810, 1610, 2017, 2276, 2318, 2520
HpyCH4III	ACNGT	6 cut(s)	292, 1350, 1355, 1381, 1680, 1861
HpyCH4IV	ACGT	2 cut(s)	1694, 2379
HpyF10VI	GCNNNNNNNGC	5 cut(s)	149, 361, 2276, 2328, 2355
HpyF3I	CTNAG	4 cut(s)	1424, 1914, 1931, 2342
HpySE526I	ACGT	2 cut(s)	1694, 2379
Hsp92II	CATG	9 cut(s)	332, 1655, 1742, 2089, 2197, 2249, 2392, 2414, 2506
HspAI	GCGC	3 cut(s)	574, 722, 1332
Ksp22I	TGATCA	2 cut(s)	111, 642
KspAI	GTTAAC	1 cut(s)	1147
Kzo9I	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
LguI	GCTCTTC	2 cut(s)	2099, 2373
LmnI	GCTCC	7 cut(s)	360, 727, 900, 1305, 1331, 1864, 2089
Lsp1109I	GCAGC	5 cut(s)	392, 563, 1504, 1779, 2047
LweI	GCATC	5 cut(s)	1081, 1171, 1302, 1649, 2569
MaeI	CTAG	8 cut(s)	563, 666, 693, 812, 912, 1242, 2043, 2103
MaeII	ACGT	2 cut(s)	1694, 2379
MaeIII	GTNAC	5 cut(s)	73, 242, 1493, 1530, 1903
MalI	GATC	7 cut(s)	113, 444, 629, 644, 677, 798, 1853
MboI	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
MfeI	CAATTG	1 cut(s)	1121
MhlI	GDGCHC	4 cut(s)	357, 1362, 2094, 2435
MlsI	TGGCCA	1 cut(s)	296
MluI	ACGCGT	1 cut(s)	969
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	5 cut(s)	54, 598, 1443, 1620, 2168
MmeI	TCCRAC	1 cut(s)	2445
Mox20I	TGGCCA	1 cut(s)	296
Mph1103I	ATGCAT	1 cut(s)	228
MroXI	GAANNNNTTC	1 cut(s)	1103
MscI	TGGCCA	1 cut(s)	296
MslI	CAYNNNNRTG	3 cut(s)	54, 1223, 2144
Msp20I	TGGCCA	1 cut(s)	296
MspI	CCGG	3 cut(s)	1335, 2009, 2407
MspR9I	CCNGG	1 cut(s)	1368
MunI	CAATTG	1 cut(s)	1121
Mva1269I	GAATGC	1 cut(s)	2576
MvaI	CCWGG	1 cut(s)	1368
MvnI	CGCG	3 cut(s)	436, 971, 1392
MwoI	GCNNNNNNNGC	5 cut(s)	149, 361, 2276, 2328, 2355
NdeI	CATATG	4 cut(s)	958, 1537, 1636, 1796
NdeII	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
NheI	GCTAGC	1 cut(s)	562
NlaIII	CATG	9 cut(s)	332, 1655, 1742, 2089, 2197, 2249, 2392, 2414, 2506
NlaIV	GGNNCC	4 cut(s)	307, 1327, 1939, 2330
NmuCI	GTSAC	3 cut(s)	73, 242, 1903
NsiI	ATGCAT	1 cut(s)	228
NspI	RCATGY	3 cut(s)	1655, 2197, 2414
NspV	TTCGAA	1 cut(s)	427
PaeI	GCATGC	1 cut(s)	2414
PagI	TCATGA	1 cut(s)	2502
PaqCI	CACCTGC	1 cut(s)	2039
PceI	AGGCCT	1 cut(s)	2027
PciI	ACATGT	2 cut(s)	1651, 2193
PciSI	GCTCTTC	2 cut(s)	2099, 2373
PcsI	WCGNNNNNNNCGW	2 cut(s)	433, 2392
PctI	GAATGC	1 cut(s)	2576
PdmI	GAANNNNTTC	1 cut(s)	1103
PfeI	GAWTC	9 cut(s)	122, 255, 662, 670, 866, 977, 1007, 1084, 2417
PkrI	GCNGC	6 cut(s)	382, 578, 1519, 1769, 2062, 2348
PleI	GAGTC	5 cut(s)	54, 598, 1442, 1619, 2168
PpsI	GAGTC	5 cut(s)	54, 598, 1442, 1619, 2168
PpuMI	RGGWCCY	1 cut(s)	2039
PscI	ACATGT	2 cut(s)	1651, 2193
PshAI	GACNNNNGTC	1 cut(s)	2455
PshBI	ATTAAT	1 cut(s)	1814
Psp124BI	GAGCTC	2 cut(s)	357, 2094
Psp1406I	AACGTT	1 cut(s)	1694
Psp5II	RGGWCCY	1 cut(s)	2039
Psp6I	CCWGG	1 cut(s)	1366
PspGI	CCWGG	1 cut(s)	1366
PspN4I	GGNNCC	4 cut(s)	307, 1327, 1939, 2330
PspPI	GGNCC	4 cut(s)	305, 1166, 2039, 2329
PspPPI	RGGWCCY	1 cut(s)	2039
PstNI	CAGNNNCTG	1 cut(s)	1913
RsaI	GTAC	4 cut(s)	711, 857, 1339, 1352
RsaNI	GTAC	4 cut(s)	710, 856, 1338, 1351
RseI	CAYNNNNRTG	3 cut(s)	54, 1223, 2144
SacI	GAGCTC	2 cut(s)	357, 2094
SalI	GTCGAC	1 cut(s)	2197
SapI	GCTCTTC	2 cut(s)	2099, 2373
SatI	GCNGC	6 cut(s)	381, 577, 1518, 1768, 2061, 2347
Sau3AI	GATC	7 cut(s)	111, 442, 627, 642, 675, 796, 1851
Sau96I	GGNCC	4 cut(s)	305, 1166, 2039, 2329
ScaI	AGTACT	1 cut(s)	711
SchI	GAGTC	5 cut(s)	54, 598, 1443, 1620, 2168
ScrFI	CCNGG	1 cut(s)	1368
SduI	GDGCHC	4 cut(s)	357, 1362, 2094, 2435
SfaNI	GCATC	5 cut(s)	1081, 1171, 1302, 1649, 2569
SfcI	CTRYAG	1 cut(s)	321
SfuI	TTCGAA	1 cut(s)	427
SinI	GGWCC	1 cut(s)	2039
SmiMI	CAYNNNNRTG	3 cut(s)	54, 1223, 2144
SmlI	CTYRAG	1 cut(s)	996
SmoI	CTYRAG	1 cut(s)	996
SpeI	ACTAGT	1 cut(s)	692
SphI	GCATGC	1 cut(s)	2414
SseBI	AGGCCT	1 cut(s)	2027
SsiI	CCGC	6 cut(s)	164, 1392, 2063, 2202, 2305, 2346
SspI	AATATT	1 cut(s)	1033
SspMI	CTAG	8 cut(s)	563, 666, 693, 812, 912, 1242, 2043, 2103
SstI	GAGCTC	2 cut(s)	357, 2094
StuI	AGGCCT	1 cut(s)	2027
StyD4I	CCNGG	1 cut(s)	1366
StyI	CCWWGG	2 cut(s)	549, 832
TaaI	ACNGT	6 cut(s)	292, 1350, 1355, 1381, 1680, 1861
TaiI	ACGT	2 cut(s)	1697, 2382
TatI	WGTACW	3 cut(s)	709, 855, 1350
TauI	GCSGC	1 cut(s)	2349
TfiI	GAWTC	9 cut(s)	122, 255, 662, 670, 866, 977, 1007, 1084, 2417
TseFI	GTSAC	3 cut(s)	73, 242, 1903
TseI	GCWGC	5 cut(s)	380, 576, 1517, 1767, 2060
Tsp45I	GTSAC	3 cut(s)	73, 242, 1903
TspDTI	ATGAA	7 cut(s)	17, 576, 1322, 1477, 1727, 2276, 2519
TspGWI	ACGGA	1 cut(s)	2241
VpaK11BI	GGWCC	1 cut(s)	2039
VspI	ATTAAT	1 cut(s)	1814
XagI	CCTNNNNNAGG	3 cut(s)	1884, 2046, 2167
XapI	RAATTY	2 cut(s)	884, 1054
XceI	RCATGY	3 cut(s)	1655, 2197, 2414
XmiI	GTMKAC	4 cut(s)	468, 653, 2198, 2301
XmnI	GAANNNNTTC	1 cut(s)	1103
XspI	CTAG	8 cut(s)	563, 666, 693, 812, 912, 1242, 2043, 2103
ZrmI	AGTACT	1 cut(s)	711
Zsp2I	ATGCAT	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.