Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Reverse (-)

9124081 .. 9127931

Gene Structure 3851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016695

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGAATATAGCCTTGCTTCTGCTTTTTTTAGTTTTCTGTAAGGGTTCTCATACTAGTGGGCTCATTACTAATGTCACTACAAGATCTGATGTATTGAACATTGGTTCGATGTTCACTTTCGATTCTGTCATTGGGAAAATTGCAAAACTTGCCATAACACTTGCGGTTGAAGATGTCAATTCCAATCCCAACATTCTCAATGGCACAAAGCTCTCACTCAAAATGCATAACACCAAATCGAGTGACTTCCTCAGAATCTTTATGGAGAATGACACAGTGGCCATAATTGGCCCCCAATTCTCAGCTACAGCTCATGTTATCTCACACATAGCAAATGAGCTCCAAGTGCCTTTGTTATCATTTGCAGCAACAGATCCTACTCTATCTCCTGTTCAGTTCCCTTTCTTGGTTCGAACAACGCAAAGCGATCTCTTTCAGATGACAGCAGTGGTAGACCTTGTTGTTCACTACGAGTGGAGAGATGTCATAGCAATATATGTAGATGACGATTTTGGAAGAAATGCTATTGCTTCCTTGGGTGATAAGCTAGCCGAAAAGCGCTGCAAGATTTCATACAAAGTGCCTTTGACTCCCACAGCAACAAAAGATGAGATCAGAAAGGCACTGATCAGTGTGTCTACAATGGAGTCTAGGATTCTGATCCTGCACATTTATACTAGTTGGGGTCTGCAAGTACTTGAAGAAGCGCAGGAGCAGAAGATGATGGATAGTGGATATGTGTGGATTGCTACTGATTGGTTCTCCACCATTTTAGATACTGATCCTTCTCTCCCTCTAGTGCAAACAAACATCCAAGGCGTTCTCACATTATGTAGCAACTTGACTAGGGCAAGAAGATTACTTAATAACACTTCTTTTGGGTTAAATACATATGGCCTATACGCGTATGATTCGGTGTTGCTTCTTGCTCAAGCAATCGAATCATTTTTCGCTAATGGGGGGAATATTTCCTTTTCAAATGACACAAATTTGAGGGATTTAAGTGGTGGGAAGTTGAATCTTGATGCTTTGAACATTTTCAATGGAGGCAGGCAATTGCTCAAAAGCATTTTAGGGGTTAACACAACTGGCTTAACAGCGCAAATTAAGTTTGATGCAGATGGGAACTTACTCAATCCTGCATTTGAAGTCATCAATGTGATTGGCACAGGGACTAGAACTATTGGCTATTGGTCTAACTCCTCAGGTGTAAATGTTCTTCCTCTAGAAAAGCTCCAAATGAAGATGCAGACTAATGGCTTCAGCGCCGGTACTCAAAAACTGTACAGTGTGATCTGGCCTGGACAAACAATTGAGAAGCCTCGCGGATGGGTTTTCCCTTACAATGGCAGAAAGCTCAGGATTGGAGTCCCCCATCGAGTTAGCTACCCCGAGTTTGTGGGTATAAAAGGCACTGATTTAAGTGGTTACTACATTGAGGTCTTTCAGGCTGCACTAAATGAGTTACCATATGGTGTGGCATACAAGTATGTCCCTTTTGGAGATGGTATCAAAAACCCAGAAAACAATGACCTTCTGCACAGAGTCCAAATTAGGGTCGGTATAAATAGTACTTGGACTTTTTGCTTAACATGGTTTAGCTTTTCGACTTTGTTCTTCTCCCAGAAAGAGAAAACTGGCAGCACACTTGGTCACTTTTTGGAAATCATATGGCTATTTGTGGTATTAATACTCAACTCCAGCTACATTGCAAGCTTGACTTCGATCCTCACAGTGGAGCAACTTTCTTCACCTGTGAAAGGGATTGAAAGTTTTGTGACAGGCACTGAGCCCATTGGTTATCTAAGGGGTTCCTTTGTTGAAGCTTACTTAACCGACGAGCTAAACATACATCATAGCAGACTTGTTGCCCTTAACTCGCCGGAAGATTATGAGAAGGCCTTGAAGAAAGGTCCTAGTGCAGGTGGTGTTGCTGCGGTGATTGATGAGCGTGCTTACATGGAGCTCTTCCTCTCTAGTCAATGTGGATATAGTTTTGTTGGTCAAGAGTTCACTAAAATAGGTTGGGGATTTGCCTTTTCGAGGGACTCCCCATTGGCAATCGACAAGTGGACCGCCATATTGAAGCTATCAGAGAACGGAAACCTCCAAAAGATCCATGACAAGTGGCTAATGAAAAGTGCTTGCAGTGCAGCAGGAGCAAAGCAAGCAGTAGACCGGCTTCAGCTAAAGAGCTTTTGGGGCCTCTTTCTACTAAGCGGCATTGCTTGCTTTCTTGCTCTTCTTCTTCATGTTCTTCACATGGTTCGACAGTACTACCAGCATGCAGATTCCGACATCGAGAGCTCGCAATCTACAGGACGACTGAAGTCGTTTGTTTCGTTTGTAAATAAGAGGGAACAAGAAGTGAAAAGCAGTTCCAAGAGAAGGACTGATAATAAAGCCTCAAATAAGATAGCGCATGATCAAGAATGCAATAGAGATGGTTTCGATGAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

821

Amino Acids

91.04

Weight (kDa)

6.97

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	49 - 389	1.7e-78	Receptor family ligand binding region
Peripla_BP_6	PF13458	87 - 203	1.5e-07	Periplasmic binding protein
Lig_chan	PF00060	529 - 744	1.5e-21	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1913
Acc36I	ACCTGC	1 cut(s)	1913
AccI	GTMKAC	3 cut(s)	453, 638, 2175
AccII	CGCG	2 cut(s)	905, 1326
AciI	CCGC	5 cut(s)	164, 1326, 1937, 2076, 2220
AclWI	GGATC	5 cut(s)	368, 655, 776, 1720, 2110
AcoI	YGGCCR	1 cut(s)	279
AcsI	RAATTY	1 cut(s)	988
AcuI	CTGAAG	3 cut(s)	1246, 2168, 2348
AfaI	GTAC	5 cut(s)	696, 1273, 1286, 1573, 2276
AfeI	AGCGCT	1 cut(s)	560
AfiI	CCNNNNNNNGG	8 cut(s)	406, 1346, 1555, 1735, 1760, 1922, 2043, 2388
AflIII	ACRYGT	1 cut(s)	903
AhlI	ACTAGT	2 cut(s)	53, 677
AjnI	CCWGG	1 cut(s)	1300
Alw21I	GWGCWC	3 cut(s)	342, 1968, 2309
AlwI	GGATC	5 cut(s)	368, 655, 776, 1720, 2110
AlwNI	CAGNNNCTG	1 cut(s)	1787
Ama87I	CYCGRG	1 cut(s)	1391
Aor51HI	AGCGCT	1 cut(s)	560
AoxI	GGCC	6 cut(s)	279, 289, 895, 1298, 1899, 2203
ApeKI	GCWGC	6 cut(s)	365, 561, 1451, 1641, 1934, 2153
ApoI	RAATTY	1 cut(s)	988
AseI	ATTAAT	1 cut(s)	1688
Asp700I	GAANNNNTTC	1 cut(s)	1037
AspLEI	GCGC	5 cut(s)	561, 709, 1102, 1268, 2422
AspS9I	GGNCC	4 cut(s)	290, 1913, 2073, 2203
AsuHPI	GGTGA	3 cut(s)	551, 1743, 1951
AsuII	TTCGAA	1 cut(s)	412
AsuNHI	GCTAGC	1 cut(s)	547
AvaI	CYCGRG	1 cut(s)	1391
AvaII	GGWCC	2 cut(s)	1913, 2073
AxyI	CCTNAGG	1 cut(s)	1204
BalI	TGGCCA	1 cut(s)	281
BanII	GRGCYC	5 cut(s)	63, 342, 1794, 1968, 2309
BarI	GAAGNNNNNNTAC	4 cut(s)	1203, 1235, 2166, 2198
Bbv12I	GWGCWC	3 cut(s)	342, 1968, 2309
BbvI	GCAGC	6 cut(s)	377, 548, 1438, 1653, 1921, 2165
BccI	CCATC	6 cut(s)	718, 1115, 1323, 1383, 1499, 2438
BciT130I	CCWGG	1 cut(s)	1302
BclI	TGATCA	2 cut(s)	627, 2425
BcuI	ACTAGT	2 cut(s)	53, 677
BfmI	CTRYAG	2 cut(s)	306, 2316
BfoI	RGCGCY	2 cut(s)	562, 1269
BfuAI	ACCTGC	1 cut(s)	1913
BglII	AGATCT	1 cut(s)	83
BisI	GCNGC	7 cut(s)	366, 562, 1452, 1642, 1935, 2154, 2221
BlsI	GCNGC	7 cut(s)	367, 563, 1453, 1643, 1936, 2155, 2222
BmcAI	AGTACT	3 cut(s)	696, 1573, 2276
Bme1390I	CCNGG	1 cut(s)	1302
Bme18I	GGWCC	2 cut(s)	1913, 2073
BmeT110I	CYCGRG	1 cut(s)	1391
BmgT120I	GGNCC	4 cut(s)	290, 1913, 2073, 2203
BmiI	GGNNCC	3 cut(s)	292, 1813, 2204
BmrFI	CCNGG	1 cut(s)	1302
BmsI	GCATC	3 cut(s)	1015, 1105, 1236
BmtI	GCTAGC	1 cut(s)	551
BoxI	GACNNNNGTC	1 cut(s)	2329
BpmI	CTGGAG	1 cut(s)	1684
Bpu10I	CCTNAGC	1 cut(s)	1358
Bpu14I	TTCGAA	1 cut(s)	412
BpuEI	CTTGAG	1 cut(s)	915
BsaBI	GATNNNNATC	2 cut(s)	659, 780
BsaJI	CCNNGG	2 cut(s)	534, 814
BsaXI	ACNNNNNCTCC	2 cut(s)	370, 400
Bsc4I	CCNNNNNNNGG	8 cut(s)	406, 1346, 1555, 1735, 1760, 1922, 2043, 2388
Bse118I	RCCGGY	2 cut(s)	1268, 2178
Bse1I	ACTGG	2 cut(s)	1093, 1642
Bse21I	CCTNAGG	1 cut(s)	1204
Bse3DI	GCAATG	2 cut(s)	1707, 2223
Bse8I	GATNNNNATC	2 cut(s)	659, 780
BseBI	CCWGG	1 cut(s)	1302
BseDI	CCNNGG	2 cut(s)	534, 814
BseGI	GGATG	2 cut(s)	810, 1334
BseJI	GATNNNNATC	2 cut(s)	659, 780
BseLI	CCNNNNNNNGG	8 cut(s)	406, 1346, 1555, 1735, 1760, 1922, 2043, 2388
BseMI	GCAATG	2 cut(s)	1707, 2223
BseMII	CTCAG	5 cut(s)	265, 315, 1218, 1372, 1779
BseNI	ACTGG	2 cut(s)	1093, 1642
BseRI	GAGGAG	1 cut(s)	1192
BseXI	GCAGC	6 cut(s)	377, 548, 1438, 1653, 1921, 2165
BsgI	GTGCAG	5 cut(s)	650, 1437, 1523, 1941, 2172
Bsh1236I	CGCG	2 cut(s)	905, 1326
BshFI	GGCC	6 cut(s)	281, 291, 897, 1300, 1901, 2205
BsiHKAI	GWGCWC	3 cut(s)	342, 1968, 2309
BsiHKCI	CYCGRG	1 cut(s)	1391
BsiSI	CCGG	3 cut(s)	1269, 1883, 2179
BslFI	GGGAC	4 cut(s)	1186, 1355, 1478, 2060
BslI	CCNNNNNNNGG	8 cut(s)	406, 1346, 1555, 1735, 1760, 1922, 2043, 2388
BsmFI	GGGAC	4 cut(s)	1186, 1355, 1478, 2060
BsmI	GAATGC	1 cut(s)	2438
BsnI	GGCC	6 cut(s)	281, 291, 897, 1300, 1901, 2205
BsoBI	CYCGRG	1 cut(s)	1391
Bsp119I	TTCGAA	1 cut(s)	412
Bsp1286I	GDGCHC	5 cut(s)	63, 342, 1794, 1968, 2309
Bsp1407I	TGTACA	1 cut(s)	1284
BspACI	CCGC	5 cut(s)	164, 1326, 1937, 2076, 2220
BspANI	GGCC	6 cut(s)	281, 291, 897, 1300, 1901, 2205
BspCNI	CTCAG	5 cut(s)	264, 314, 1217, 1371, 1780
BspFNI	CGCG	2 cut(s)	905, 1326
BspLI	GGNNCC	3 cut(s)	292, 1813, 2204
BspMI	ACCTGC	1 cut(s)	1913
BspOI	GCTAGC	1 cut(s)	551
BspPI	GGATC	5 cut(s)	368, 655, 776, 1720, 2110
BspQI	GCTCTTC	2 cut(s)	1973, 2247
BspT104I	TTCGAA	1 cut(s)	412
BsrDI	GCAATG	2 cut(s)	1707, 2223
BsrFI	RCCGGY	2 cut(s)	1268, 2178
BsrGI	TGTACA	1 cut(s)	1284
BsrI	ACTGG	2 cut(s)	1093, 1642
BssAI	RCCGGY	2 cut(s)	1268, 2178
BssECI	CCNNGG	2 cut(s)	534, 814
BssT1I	CCWWGG	2 cut(s)	534, 814
Bst2UI	CCWGG	1 cut(s)	1302
Bst4CI	ACNGT	5 cut(s)	277, 1284, 1289, 1735, 2274
Bst6I	CTCTTC	2 cut(s)	1973, 2247
BstAPI	GCANNNNNTGC	2 cut(s)	149, 2229
BstAUI	TGTACA	1 cut(s)	1284
BstBI	TTCGAA	1 cut(s)	412
BstC8I	GCNNGC	9 cut(s)	549, 1052, 1714, 1953, 2146, 2169, 2230, 2286, 2309
BstDEI	CTNAG	7 cut(s)	251, 301, 1204, 1358, 1788, 1805, 2216
BstENI	CCTNNNNNAGG	3 cut(s)	1758, 1920, 2041
BstF5I	GGATG	2 cut(s)	810, 1334
BstFNI	CGCG	2 cut(s)	905, 1326
BstH2I	RGCGCY	2 cut(s)	562, 1269
BstHHI	GCGC	5 cut(s)	561, 709, 1102, 1268, 2422
BstMWI	GCNNNNNNNGC	7 cut(s)	149, 346, 2150, 2159, 2168, 2202, 2229
BstNI	CCWGG	1 cut(s)	1302
BstNSI	RCATGY	1 cut(s)	2288
BstPAI	GACNNNNGTC	1 cut(s)	2329
BstSCI	CCNGG	1 cut(s)	1300
BstSFI	CTRYAG	2 cut(s)	306, 2316
BstUI	CGCG	2 cut(s)	905, 1326
BstV1I	GCAGC	6 cut(s)	377, 548, 1438, 1653, 1921, 2165
BstX2I	RGATCY	3 cut(s)	83, 373, 2115
BstYI	RGATCY	3 cut(s)	83, 373, 2115
Bsu36I	CCTNAGG	1 cut(s)	1204
BsuRI	GGCC	6 cut(s)	281, 291, 897, 1300, 1901, 2205
BtsCI	GGATG	2 cut(s)	810, 1334
BtsI	GCAGTG	2 cut(s)	453, 2155
BtsIMutI	CAGTG	9 cut(s)	282, 453, 623, 637, 1294, 1413, 1740, 1785, 2155
BveI	ACCTGC	1 cut(s)	1913
Cac8I	GCNNGC	9 cut(s)	549, 1052, 1714, 1953, 2146, 2169, 2230, 2286, 2309
CaiI	CAGNNNCTG	1 cut(s)	1787
CfoI	GCGC	5 cut(s)	561, 709, 1102, 1268, 2422
Cfr10I	RCCGGY	2 cut(s)	1268, 2178
Cfr13I	GGNCC	4 cut(s)	290, 1913, 2073, 2203
Csp6I	GTAC	5 cut(s)	695, 1272, 1285, 1572, 2275
CviAII	CATG	8 cut(s)	314, 1593, 1960, 2120, 2252, 2263, 2285, 2423
CviQI	GTAC	5 cut(s)	695, 1272, 1285, 1572, 2275
DdeI	CTNAG	7 cut(s)	251, 301, 1204, 1358, 1788, 1805, 2216
EaeI	YGGCCR	1 cut(s)	279
Eam1104I	CTCTTC	2 cut(s)	1973, 2247
EarI	CTCTTC	2 cut(s)	1973, 2247
Ecl136II	GAGCTC	3 cut(s)	340, 1966, 2307
Eco130I	CCWWGG	2 cut(s)	534, 814
Eco147I	AGGCCT	1 cut(s)	1901
Eco24I	GRGCYC	5 cut(s)	63, 342, 1794, 1968, 2309
Eco47I	GGWCC	2 cut(s)	1913, 2073
Eco47III	AGCGCT	1 cut(s)	560
Eco53kI	GAGCTC	3 cut(s)	340, 1966, 2307
Eco57I	CTGAAG	3 cut(s)	1246, 2168, 2348
Eco81I	CCTNAGG	1 cut(s)	1204
Eco88I	CYCGRG	1 cut(s)	1391
EcoICRI	GAGCTC	3 cut(s)	340, 1966, 2307
EcoNI	CCTNNNNNAGG	3 cut(s)	1758, 1920, 2041
EcoO109I	RGGNCCY	2 cut(s)	1913, 2203
EcoRII	CCWGG	1 cut(s)	1300
EcoT14I	CCWWGG	2 cut(s)	534, 814
EcoT22I	ATGCAT	1 cut(s)	228
EcoT38I	GRGCYC	5 cut(s)	63, 342, 1794, 1968, 2309
ErhI	CCWWGG	2 cut(s)	534, 814
FaeI	CATG	8 cut(s)	317, 1596, 1963, 2123, 2255, 2266, 2288, 2426
FalI	AAGNNNNNCTT	2 cut(s)	1705, 1737
FaqI	GGGAC	4 cut(s)	1186, 1355, 1478, 2060
FatI	CATG	8 cut(s)	313, 1592, 1959, 2119, 2251, 2262, 2284, 2422
FauNDI	CATATG	3 cut(s)	892, 1471, 1670
FbaI	TGATCA	2 cut(s)	627, 2425
FblI	GTMKAC	3 cut(s)	453, 638, 2175
Fnu4HI	GCNGC	7 cut(s)	366, 562, 1452, 1642, 1935, 2154, 2221
FokI	GGATG	2 cut(s)	797, 1341
FriOI	GRGCYC	5 cut(s)	63, 342, 1794, 1968, 2309
Fsp4HI	GCNGC	7 cut(s)	366, 562, 1452, 1642, 1935, 2154, 2221
GlaI	GCGC	5 cut(s)	560, 708, 1101, 1267, 2421
GluI	GCNGC	7 cut(s)	366, 562, 1452, 1642, 1935, 2154, 2221
GsuI	CTGGAG	1 cut(s)	1684
HaeII	RGCGCY	2 cut(s)	562, 1269
HaeIII	GGCC	6 cut(s)	281, 291, 897, 1300, 1901, 2205
HapII	CCGG	3 cut(s)	1269, 1883, 2179
HhaI	GCGC	5 cut(s)	561, 709, 1102, 1268, 2422
Hin1II	CATG	8 cut(s)	317, 1596, 1963, 2123, 2255, 2266, 2288, 2426
Hin6I	GCGC	5 cut(s)	559, 707, 1100, 1266, 2420
HinP1I	GCGC	5 cut(s)	559, 707, 1100, 1266, 2420
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HindIII	AAGCTT	2 cut(s)	1714, 1824
HpaI	GTTAAC	1 cut(s)	1081
HpaII	CCGG	3 cut(s)	1269, 1883, 2179
HphI	GGTGA	3 cut(s)	551, 1743, 1951
Hpy166II	GTNNAC	8 cut(s)	114, 454, 466, 639, 1081, 2013, 2073, 2176
Hpy188I	TCNGA	7 cut(s)	88, 254, 438, 617, 660, 2095, 2296
Hpy188III	TCNNGA	6 cut(s)	1022, 1226, 1360, 2006, 2302, 2429
Hpy8I	GTNNAC	8 cut(s)	114, 454, 466, 639, 1081, 2013, 2073, 2176
Hpy99I	CGWCG	1 cut(s)	1841
HpyAV	CCTTC	4 cut(s)	795, 1544, 1891, 2382
HpyCH4III	ACNGT	5 cut(s)	277, 1284, 1289, 1735, 2274
HpyF10VI	GCNNNNNNNGC	7 cut(s)	149, 346, 2150, 2159, 2168, 2202, 2229
HpyF3I	CTNAG	7 cut(s)	251, 301, 1204, 1358, 1788, 1805, 2216
Hsp92II	CATG	8 cut(s)	317, 1596, 1963, 2123, 2255, 2266, 2288, 2426
HspAI	GCGC	5 cut(s)	559, 707, 1100, 1266, 2420
Ksp22I	TGATCA	2 cut(s)	627, 2425
KspAI	GTTAAC	1 cut(s)	1081
LguI	GCTCTTC	2 cut(s)	1973, 2247
LmnI	GCTCC	6 cut(s)	345, 712, 1239, 1738, 1963, 2159
Lsp1109I	GCAGC	6 cut(s)	377, 548, 1438, 1653, 1921, 2165
LweI	GCATC	3 cut(s)	1015, 1105, 1236
MaeIII	GTNAC	6 cut(s)	73, 242, 1427, 1464, 1652, 1777
MfeI	CAATTG	2 cut(s)	1055, 1311
MflI	RGATCY	3 cut(s)	83, 373, 2115
MhlI	GDGCHC	5 cut(s)	63, 342, 1794, 1968, 2309
MlsI	TGGCCA	1 cut(s)	281
MluCI	AATT	9 cut(s)	138, 178, 285, 296, 988, 1055, 1104, 1311, 1551
MluI	ACGCGT	1 cut(s)	903
MluNI	TGGCCA	1 cut(s)	281
MlyI	GAGTC	5 cut(s)	583, 656, 1377, 1554, 2042
MmeI	TCCRAC	1 cut(s)	2319
Mox20I	TGGCCA	1 cut(s)	281
Mph1103I	ATGCAT	1 cut(s)	228
MroXI	GAANNNNTTC	1 cut(s)	1037
MscI	TGGCCA	1 cut(s)	281
MslI	CAYNNNNRTG	2 cut(s)	54, 1157
Msp20I	TGGCCA	1 cut(s)	281
MspI	CCGG	3 cut(s)	1269, 1883, 2179
MspR9I	CCNGG	1 cut(s)	1302
MunI	CAATTG	2 cut(s)	1055, 1311
Mva1269I	GAATGC	1 cut(s)	2438
MvaI	CCWGG	1 cut(s)	1302
MvnI	CGCG	2 cut(s)	905, 1326
MwoI	GCNNNNNNNGC	7 cut(s)	149, 346, 2150, 2159, 2168, 2202, 2229
NdeI	CATATG	3 cut(s)	892, 1471, 1670
NheI	GCTAGC	1 cut(s)	547
NlaIII	CATG	8 cut(s)	317, 1596, 1963, 2123, 2255, 2266, 2288, 2426
NlaIV	GGNNCC	3 cut(s)	292, 1813, 2204
NmuCI	GTSAC	4 cut(s)	73, 242, 1652, 1777
NsiI	ATGCAT	1 cut(s)	228
NspI	RCATGY	1 cut(s)	2288
NspV	TTCGAA	1 cut(s)	412
PaeI	GCATGC	1 cut(s)	2288
PaqCI	CACCTGC	1 cut(s)	1913
PceI	AGGCCT	1 cut(s)	1901
PciSI	GCTCTTC	2 cut(s)	1973, 2247
PcsI	WCGNNNNNNNCGW	1 cut(s)	2339
PctI	GAATGC	1 cut(s)	2438
PdmI	GAANNNNTTC	1 cut(s)	1037
PfeI	GAWTC	7 cut(s)	122, 255, 655, 911, 941, 1018, 2291
PkrI	GCNGC	7 cut(s)	367, 563, 1453, 1643, 1936, 2155, 2222
PleI	GAGTC	5 cut(s)	583, 655, 1376, 1553, 2042
PpsI	GAGTC	5 cut(s)	583, 655, 1376, 1553, 2042
PpuMI	RGGWCCY	1 cut(s)	1913
PshAI	GACNNNNGTC	1 cut(s)	2329
PshBI	ATTAAT	1 cut(s)	1688
Psp124BI	GAGCTC	3 cut(s)	342, 1968, 2309
Psp5II	RGGWCCY	1 cut(s)	1913
Psp6I	CCWGG	1 cut(s)	1300
PspGI	CCWGG	1 cut(s)	1300
PspN4I	GGNNCC	3 cut(s)	292, 1813, 2204
PspPI	GGNCC	4 cut(s)	290, 1913, 2073, 2203
PspPPI	RGGWCCY	1 cut(s)	1913
PstNI	CAGNNNCTG	1 cut(s)	1787
PsuI	RGATCY	3 cut(s)	83, 373, 2115
RsaI	GTAC	5 cut(s)	696, 1273, 1286, 1573, 2276
RsaNI	GTAC	5 cut(s)	695, 1272, 1285, 1572, 2275
RseI	CAYNNNNRTG	2 cut(s)	54, 1157
SacI	GAGCTC	3 cut(s)	342, 1968, 2309
SapI	GCTCTTC	2 cut(s)	1973, 2247
SatI	GCNGC	7 cut(s)	366, 562, 1452, 1642, 1935, 2154, 2221
Sau96I	GGNCC	4 cut(s)	290, 1913, 2073, 2203
ScaI	AGTACT	3 cut(s)	696, 1573, 2276
SchI	GAGTC	5 cut(s)	583, 656, 1377, 1554, 2042
ScrFI	CCNGG	1 cut(s)	1302
SduI	GDGCHC	5 cut(s)	63, 342, 1794, 1968, 2309
SfaNI	GCATC	3 cut(s)	1015, 1105, 1236
SfcI	CTRYAG	2 cut(s)	306, 2316
SfuI	TTCGAA	1 cut(s)	412
SinI	GGWCC	2 cut(s)	1913, 2073
SmiMI	CAYNNNNRTG	2 cut(s)	54, 1157
SmlI	CTYRAG	1 cut(s)	930
SmoI	CTYRAG	1 cut(s)	930
SpeI	ACTAGT	2 cut(s)	53, 677
SphI	GCATGC	1 cut(s)	2288
Sse9I	AATT	9 cut(s)	138, 178, 285, 296, 988, 1055, 1104, 1311, 1551
SseBI	AGGCCT	1 cut(s)	1901
SsiI	CCGC	5 cut(s)	164, 1326, 1937, 2076, 2220
SspI	AATATT	1 cut(s)	967
SstI	GAGCTC	3 cut(s)	342, 1968, 2309
StuI	AGGCCT	1 cut(s)	1901
StyD4I	CCNGG	1 cut(s)	1300
StyI	CCWWGG	2 cut(s)	534, 814
TaaI	ACNGT	5 cut(s)	277, 1284, 1289, 1735, 2274
TasI	AATT	9 cut(s)	138, 178, 285, 296, 988, 1055, 1104, 1311, 1551
TatI	WGTACW	4 cut(s)	694, 1284, 1571, 2274
TauI	GCSGC	1 cut(s)	2223
TfiI	GAWTC	7 cut(s)	122, 255, 655, 911, 941, 1018, 2291
TscAI	CASTG	9 cut(s)	282, 453, 630, 637, 1294, 1420, 1740, 1792, 2155
TseFI	GTSAC	4 cut(s)	73, 242, 1652, 1777
TseI	GCWGC	6 cut(s)	365, 561, 1451, 1641, 1934, 2153
Tsp45I	GTSAC	4 cut(s)	73, 242, 1652, 1777
TspDTI	ATGAA	5 cut(s)	17, 561, 1256, 2150, 2240
TspGWI	ACGGA	1 cut(s)	2115
TspRI	CASTG	9 cut(s)	282, 453, 630, 637, 1294, 1420, 1740, 1792, 2155
VpaK11BI	GGWCC	2 cut(s)	1913, 2073
VspI	ATTAAT	1 cut(s)	1688
XagI	CCTNNNNNAGG	3 cut(s)	1758, 1920, 2041
XapI	RAATTY	1 cut(s)	988
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	1 cut(s)	2288
XmiI	GTMKAC	3 cut(s)	453, 638, 2175
XmnI	GAANNNNTTC	1 cut(s)	1037
ZrmI	AGTACT	3 cut(s)	696, 1573, 2276
Zsp2I	ATGCAT	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.