Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006853.1

Orthogroup ID

OG0001053

Physical Location & Seq

Genomic Coordinates Forward (+)

36697 .. 40381

Gene Structure 3685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006853.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

atgttcactttcgattctgtcattgggaaaattgcaaaacttgccataacacttgcggttgaagatgtcaattccaatcccaacattctcaagggcacaaagctctcactcaaaatgcatgacaccaaatcgagtgacttcctcggaatcgttgaagctttgcagtttatggagaatgacacagtggccataattggcccccaattctcagctacagctcacgttatctcacacatagcaaatgagctccaagtgcctttgttatcattcgcagcaacagaccctactctatctcctgttcagttccctttctttgttcgaacaacacgaagcgatctctttcagatgacagcagtggtagaccttgttgttcactacgagtggagagatgtcatagcaatatatgtagatgacgattttggaagaaatgctattgcttccttgggtgataagctagccgaaaagcgctgcaagatttcatacaaagtgcctttgactcccacagcaacaaaagatgagatcagaaaggcactgatcagtgtgtctacaatggagtctaggattctgatcctgcacatttatactagttggggtctgcaagtacttgaagaagcgcaggagcagaagatgatggatagtggatatgtgtggattgctactgattggttctccaccattttagatacagatccttctctccctctagtgcaaacaaacaacatccaaggcgttctcacattgcgaatgtacacacccgattcacaactcaagacggaattcaagtcgagatggagcaacttgactaaggcaagaagattacttaataacacttcttttggtttaaatacatatggcctatacgcgtatgattcggtgttgcttcttgctcaagcaattgaatcatttttcgctaatgggtggaacatttccttttcaaatgacacaaatttgagggagttaagtggtgggaagttgaatcttgatgctttgaacattttcaatggaggcaggcaattgctcaaaagcattttagaggtcaacacaactggcttgacaggaccgattaagtttgatgctgatgggaacttactcaatcctgcatttgaagtcatcaatgtgattggcacagggactagaactattggctattggtcgaactcctcgggcttaaatgttcttcctccagaaaagctccaaatgaagatgcagactaatggctccagccccggtgctcaaaatctgtacagtgtgatctggcctggacaaacaactgagaagcctcgcggatgggttttcccttacaatggcagaaagctcaagattggagtccctcgtcgagtcagctaccgtgagtttgtgggtatacaaggcactgatttcactggttactgcattgaggtctttcaagctgcactaaatgagttaccatatggggtaccatacaagtatgtcccttttggagatggtatcaaaaacccaggaaacaatgaccttctgcacagaatccaaattggggagtttgatggtgtagtaggagatattacaatcactactaacagaacaaagatggtggattttactcaaccttatattgagtctgggctagttgtggttgctccaataaggaagatgaactcaagtgcttgggcttttctgagaccctttactccaatgatgtggggtgttactggtgttttcttcctagttgtgggagcagttatttggattttggagcgcaggactaatgaggattttagggggcatccaagaagacaatttgtgacaattgtttggtttagcttttcaactttgttcttctcccagaaagagaaaactggcagcacacttggtcgctttgtgctgatcatatggctatttgtggtactaatactcaactccagctacactgcaagcttgacttcgatcctcacagtggagcaactttcgtcacctgtgaaagggattgaaagtttagcaacaggcactgagcccattggttatctaaggggttcctttgctgaagcttacttaaccgacgagctgaacatacatcataaccgactctttccccttaactcaccggaagagtatgagaaggccttgaagaaaggtcctagtgcaggtggtgttgctgcagtgattgatgagcgtgcttacatggagctcttcctctctagtcgatgtggatatagtattgttggtcaagagttcactaaaatgggttggggatttgcctttccaagggactcgccgttggcaatcgacatgtcgaccgccatattgaagctatcggagaacggaaacctgcaaaagattcatgacaagtggctaatgaaaagtgcttgcagtgcagaaggagcaaagcaagcagtagaccgccttcagctaaagagcttttggggcctctttctactaagcggcattgcttgctttcttgctcttcttcttcatgttcttcgcatggttcaacagtactaccggcatgcagattccgacatcgagagctcgcaatctacaggacgactgaagtcgtttgtttcgtttgtaaataagagggaacaagaagtgaaaagcagttccaagagtaaagcctcaaataagatagcgcacgatcaagaatgcagtagcgatggtttcgatgaaagtgaagcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

884

Amino Acids

98.59

Weight (kDa)

6.92

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51480 AT3G51480 AT3G51480 AT3G51480
fragaria_vesca	FvH4_1g10192 FvH4_1g10210 FvH4_1g10210
malus_domestica	MD15G1229300.v1.1 MD15G1229400.v1.1 MD15G1229500.v1.1 MD15G1229600.v1.1
prunus_persica	Prupe.7G184100_v2.0.a1 Prupe.7G184300_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184400_v2.0.a1 Prupe.7G184500_v2.0.a1
pyrus_communis	pycom15g20440 pycom15g20470
rosa_chinensis	RchiOBHm_Chr1g0342071 RchiOBHm_Chr1g0342111 RchiOBHm_Chr1g0342121 RchiOBHm_Chr1g0342221 RchiOBHm_Chr2g0097001 RchiOBHm_Chr2g0097011
rosa_laevigata	RLG00000016693 RLG00000016695 RLG00000016696 RLG00000029615
rosa_multiflora	Rmu_sc0005782.1_g000005 Rmu_sc0006853.1_g000008
rosa_roxburghii	Rroxscaffold_1G00033430 Rroxscaffold_2G00145050 Rroxscaffold_2G00145070 Rroxscaffold_2G00145080 Rroxscaffold_2G00145090 Rroxscaffold_4G00317590 Rroxscaffold_4G00317600
rosa_rugosa	Rorug01G0152800.1 Rorug01G0153000.1 Rorug02G0062800 Rorug02G0063000
rosa_samantha	Rh1AG167500 Rh1AG167800 Rh1BG134100 Rh1BG134200 Rh1CG155400 Rh1DG168300 Rh1DG168400 Rh2AG110600 Rh2BG112400 Rh2BG112500 Rh2CG114500 Rh2CG114600 Rh2DG113700 Rh2DG113800
rosa_wichuraiana	Rw1G013960 Rw2G008560 Rw2G008580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2111
Acc36I	ACCTGC	2 cut(s)	2111, 2313
Acc65I	GGTACC	1 cut(s)	1435
AccB1I	GGYRCC	1 cut(s)	1435
AccI	GTMKAC	5 cut(s)	360, 545, 1363, 2270, 2373
AccII	CGCG	2 cut(s)	863, 1284
AciI	CCGC	5 cut(s)	56, 1284, 2274, 2377, 2418
AclWI	GGATC	3 cut(s)	562, 683, 1918
AcoI	YGGCCR	1 cut(s)	186
AcsI	RAATTY	2 cut(s)	776, 946
AcuI	CTGAAG	3 cut(s)	2040, 2366, 2546
AfaI	GTAC	6 cut(s)	603, 749, 1244, 1437, 1884, 2474
AfeI	AGCGCT	1 cut(s)	467
AfiI	CCNNNNNNNGG	7 cut(s)	1304, 1513, 1708, 1933, 1958, 2120, 2241
AflIII	ACRYGT	2 cut(s)	861, 2265
AhlI	ACTAGT	1 cut(s)	584
AjnI	CCWGG	2 cut(s)	1258, 1477
Alw21I	GWGCWC	4 cut(s)	249, 1234, 2166, 2507
Alw26I	GTCTC	1 cut(s)	1651
AlwI	GGATC	3 cut(s)	562, 683, 1918
AlwNI	CAGNNNCTG	1 cut(s)	1985
Ama87I	CYCGRG	1 cut(s)	1162
Aor51HI	AGCGCT	1 cut(s)	467
AoxI	GGCC	6 cut(s)	186, 196, 853, 1256, 2097, 2401
ApeKI	GCWGC	5 cut(s)	272, 468, 1409, 1839, 2132
ApoI	RAATTY	2 cut(s)	776, 946
Asp700I	GAANNNNTTC	1 cut(s)	995
Asp718I	GGTACC	1 cut(s)	1435
AspLEI	GCGC	4 cut(s)	468, 616, 1737, 2608
AspS9I	GGNCC	4 cut(s)	197, 1058, 2111, 2401
AsuC2I	CCSGG	1 cut(s)	1227
AsuHPI	GGTGA	3 cut(s)	458, 1941, 2070
AsuII	TTCGAA	1 cut(s)	319
AsuNHI	GCTAGC	1 cut(s)	454
AvaI	CYCGRG	1 cut(s)	1162
AvaII	GGWCC	2 cut(s)	1058, 2111
BaeGI	GKGCMC	1 cut(s)	98
BalI	TGGCCA	1 cut(s)	188
BanI	GGYRCC	1 cut(s)	1435
BanII	GRGCYC	4 cut(s)	249, 1992, 2166, 2507
BarI	GAAGNNNNNNTAC	2 cut(s)	2364, 2396
BbsI	GAAGAC	1 cut(s)	1777
Bbv12I	GWGCWC	4 cut(s)	249, 1234, 2166, 2507
BbvI	GCAGC	5 cut(s)	284, 455, 1396, 1851, 2119
BccI	CCATC	8 cut(s)	625, 783, 1073, 1281, 1457, 1517, 1561, 2624
BceAI	ACGGC	1 cut(s)	2236
BciT130I	CCWGG	2 cut(s)	1260, 1479
BclI	TGATCA	2 cut(s)	534, 1863
BcnI	CCSGG	1 cut(s)	1227
BcoDI	GTCTC	1 cut(s)	1651
BcuI	ACTAGT	1 cut(s)	584
BfaI	CTAG	9 cut(s)	455, 558, 585, 704, 1134, 1604, 1703, 2115, 2175
BfmI	CTRYAG	3 cut(s)	213, 2133, 2514
BfoI	RGCGCY	1 cut(s)	469
BfuAI	ACCTGC	2 cut(s)	2111, 2313
BisI	GCNGC	6 cut(s)	273, 469, 1410, 1840, 2133, 2419
BlsI	GCNGC	6 cut(s)	274, 470, 1411, 1841, 2134, 2420
BmcAI	AGTACT	2 cut(s)	603, 2474
Bme1390I	CCNGG	3 cut(s)	1227, 1260, 1479
Bme18I	GGWCC	2 cut(s)	1058, 2111
BmeT110I	CYCGRG	1 cut(s)	1162
BmgT120I	GGNCC	4 cut(s)	197, 1058, 2111, 2401
BmiI	GGNNCC	5 cut(s)	199, 1219, 1437, 2011, 2402
BmrFI	CCNGG	3 cut(s)	1227, 1260, 1479
BmsI	GCATC	4 cut(s)	973, 1063, 1194, 1771
BmtI	GCTAGC	1 cut(s)	458
BoxI	GACNNNNGTC	1 cut(s)	2527
BpiI	GAAGAC	1 cut(s)	1777
BpmI	CTGGAG	3 cut(s)	1167, 1204, 1882
Bpu14I	TTCGAA	1 cut(s)	319
BpuEI	CTTGAG	5 cut(s)	74, 752, 873, 1301, 1621
BpuMI	CCSGG	1 cut(s)	1227
BsaBI	GATNNNNATC	2 cut(s)	566, 687
BsaI	GGTCTC	1 cut(s)	1651
BsaJI	CCNNGG	7 cut(s)	142, 441, 724, 1161, 1225, 1477, 2240
BsaWI	WCCGGW	1 cut(s)	2080
BsaXI	ACNNNNNCTCC	2 cut(s)	277, 307
Bsc4I	CCNNNNNNNGG	7 cut(s)	1304, 1513, 1708, 1933, 1958, 2120, 2241
Bse118I	RCCGGY	1 cut(s)	2478
Bse1I	ACTGG	4 cut(s)	1051, 1387, 1693, 1840
Bse3DI	GCAATG	2 cut(s)	737, 2421
Bse8I	GATNNNNATC	2 cut(s)	566, 687
BseBI	CCWGG	2 cut(s)	1260, 1479
BseDI	CCNNGG	7 cut(s)	142, 441, 724, 1161, 1225, 1477, 2240
BseGI	GGATG	3 cut(s)	720, 1292, 1762
BseJI	GATNNNNATC	2 cut(s)	566, 687
BseLI	CCNNNNNNNGG	7 cut(s)	1304, 1513, 1708, 1933, 1958, 2120, 2241
BseMI	GCAATG	2 cut(s)	737, 2421
BseMII	CTCAG	4 cut(s)	222, 1263, 1646, 1977
BseNI	ACTGG	4 cut(s)	1051, 1387, 1693, 1840
BseRI	GAGGAG	1 cut(s)	1150
BseSI	GKGCMC	1 cut(s)	98
BseXI	GCAGC	5 cut(s)	284, 455, 1396, 1851, 2119
BsgI	GTGCAG	5 cut(s)	557, 1395, 1481, 2139, 2370
Bsh1236I	CGCG	2 cut(s)	863, 1284
Bsh1285I	CGRYCG	1 cut(s)	2274
BshFI	GGCC	6 cut(s)	188, 198, 855, 1258, 2099, 2403
BshNI	GGYRCC	1 cut(s)	1435
BsiEI	CGRYCG	1 cut(s)	2274
BsiHKAI	GWGCWC	4 cut(s)	249, 1234, 2166, 2507
BsiHKCI	CYCGRG	1 cut(s)	1162
BsiSI	CCGG	3 cut(s)	1227, 2081, 2479
BslFI	GGGAC	4 cut(s)	1144, 1313, 1436, 2258
BslI	CCNNNNNNNGG	7 cut(s)	1304, 1513, 1708, 1933, 1958, 2120, 2241
BsmAI	GTCTC	1 cut(s)	1651
BsmFI	GGGAC	4 cut(s)	1144, 1313, 1436, 2258
BsmI	GAATGC	1 cut(s)	2624
BsnI	GGCC	6 cut(s)	188, 198, 855, 1258, 2099, 2403
Bso31I	GGTCTC	1 cut(s)	1651
BsoBI	CYCGRG	1 cut(s)	1162
Bsp119I	TTCGAA	1 cut(s)	319
Bsp1286I	GDGCHC	6 cut(s)	98, 249, 1234, 1992, 2166, 2507
Bsp1407I	TGTACA	2 cut(s)	747, 1242
Bsp143I	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
BspACI	CCGC	5 cut(s)	56, 1284, 2274, 2377, 2418
BspANI	GGCC	6 cut(s)	188, 198, 855, 1258, 2099, 2403
BspCNI	CTCAG	4 cut(s)	221, 1264, 1647, 1978
BspFNI	CGCG	2 cut(s)	863, 1284
BspHI	TCATGA	1 cut(s)	2317
BspLI	GGNNCC	5 cut(s)	199, 1219, 1437, 2011, 2402
BspMAI	CTGCAG	1 cut(s)	2137
BspMI	ACCTGC	2 cut(s)	2111, 2313
BspOI	GCTAGC	1 cut(s)	458
BspPI	GGATC	3 cut(s)	562, 683, 1918
BspQI	GCTCTTC	2 cut(s)	2171, 2445
BspT104I	TTCGAA	1 cut(s)	319
BspT107I	GGYRCC	1 cut(s)	1435
BspTNI	GGTCTC	1 cut(s)	1651
BsrDI	GCAATG	2 cut(s)	737, 2421
BsrFI	RCCGGY	1 cut(s)	2478
BsrGI	TGTACA	2 cut(s)	747, 1242
BsrI	ACTGG	4 cut(s)	1051, 1387, 1693, 1840
BssAI	RCCGGY	1 cut(s)	2478
BssECI	CCNNGG	7 cut(s)	142, 441, 724, 1161, 1225, 1477, 2240
BssMI	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
BssNAI	GTATAC	1 cut(s)	1364
BssT1I	CCWWGG	3 cut(s)	441, 724, 2240
Bst1107I	GTATAC	1 cut(s)	1364
Bst2UI	CCWGG	2 cut(s)	1260, 1479
Bst4CI	ACNGT	5 cut(s)	184, 1247, 1349, 1933, 2472
Bst6I	CTCTTC	3 cut(s)	2079, 2171, 2445
BstAPI	GCANNNNNTGC	2 cut(s)	41, 2427
BstAUI	TGTACA	2 cut(s)	747, 1242
BstBI	TTCGAA	1 cut(s)	319
BstC8I	GCNNGC	9 cut(s)	456, 1010, 1912, 2151, 2344, 2367, 2428, 2484, 2507
BstDEI	CTNAG	7 cut(s)	208, 804, 1272, 1655, 1986, 2003, 2414
BstENI	CCTNNNNNAGG	3 cut(s)	1956, 2118, 2239
BstF5I	GGATG	3 cut(s)	720, 1292, 1762
BstFNI	CGCG	2 cut(s)	863, 1284
BstH2I	RGCGCY	1 cut(s)	469
BstHHI	GCGC	4 cut(s)	468, 616, 1737, 2608
BstKTI	GATC	9 cut(s)	337, 522, 537, 570, 691, 1254, 1866, 1926, 2614
BstMAI	GTCTC	1 cut(s)	1651
BstMBI	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
BstMCI	CGRYCG	1 cut(s)	2274
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 253, 2348, 2357, 2366, 2400, 2427
BstNI	CCWGG	2 cut(s)	1260, 1479
BstNSI	RCATGY	2 cut(s)	2269, 2486
BstPAI	GACNNNNGTC	1 cut(s)	2527
BstSCI	CCNGG	3 cut(s)	1225, 1258, 1477
BstSFI	CTRYAG	3 cut(s)	213, 2133, 2514
BstSLI	GKGCMC	1 cut(s)	98
BstUI	CGCG	2 cut(s)	863, 1284
BstV1I	GCAGC	5 cut(s)	284, 455, 1396, 1851, 2119
BstV2I	GAAGAC	1 cut(s)	1777
BstX2I	RGATCY	1 cut(s)	688
BstXI	CCANNNNNNTGG	1 cut(s)	1677
BstYI	RGATCY	1 cut(s)	688
BstZ17I	GTATAC	1 cut(s)	1364
BsuRI	GGCC	6 cut(s)	188, 198, 855, 1258, 2099, 2403
BtgZI	GCGATG	1 cut(s)	2643
BtsCI	GGATG	3 cut(s)	720, 1292, 1762
BtsI	GCAGTG	4 cut(s)	360, 1905, 2142, 2353
BveI	ACCTGC	2 cut(s)	2111, 2313
Cac8I	GCNNGC	9 cut(s)	456, 1010, 1912, 2151, 2344, 2367, 2428, 2484, 2507
CaiI	CAGNNNCTG	1 cut(s)	1985
CciI	TCATGA	1 cut(s)	2317
CfoI	GCGC	4 cut(s)	468, 616, 1737, 2608
Cfr10I	RCCGGY	1 cut(s)	2478
Cfr13I	GGNCC	4 cut(s)	197, 1058, 2111, 2401
Csp6I	GTAC	6 cut(s)	602, 748, 1243, 1436, 1883, 2473
CspCI	CAANNNNNGTGG	2 cut(s)	1551, 1586
CviAII	CATG	7 cut(s)	119, 2158, 2266, 2318, 2450, 2461, 2483
CviQI	GTAC	6 cut(s)	602, 748, 1243, 1436, 1883, 2473
DdeI	CTNAG	7 cut(s)	208, 804, 1272, 1655, 1986, 2003, 2414
DpnI	GATC	9 cut(s)	336, 521, 536, 569, 690, 1253, 1865, 1925, 2613
DpnII	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
DraI	TTTAAA	1 cut(s)	843
EaeI	YGGCCR	1 cut(s)	186
Eam1104I	CTCTTC	3 cut(s)	2079, 2171, 2445
EarI	CTCTTC	3 cut(s)	2079, 2171, 2445
Ecl136II	GAGCTC	3 cut(s)	247, 2164, 2505
Eco130I	CCWWGG	3 cut(s)	441, 724, 2240
Eco147I	AGGCCT	1 cut(s)	2099
Eco24I	GRGCYC	4 cut(s)	249, 1992, 2166, 2507
Eco31I	GGTCTC	1 cut(s)	1651
Eco47I	GGWCC	2 cut(s)	1058, 2111
Eco47III	AGCGCT	1 cut(s)	467
Eco53kI	GAGCTC	3 cut(s)	247, 2164, 2505
Eco57I	CTGAAG	3 cut(s)	2040, 2366, 2546
Eco88I	CYCGRG	1 cut(s)	1162
EcoICRI	GAGCTC	3 cut(s)	247, 2164, 2505
EcoNI	CCTNNNNNAGG	3 cut(s)	1956, 2118, 2239
EcoO109I	RGGNCCY	2 cut(s)	2111, 2401
EcoRI	GAATTC	1 cut(s)	776
EcoRII	CCWGG	2 cut(s)	1258, 1477
EcoT14I	CCWWGG	3 cut(s)	441, 724, 2240
EcoT22I	ATGCAT	1 cut(s)	120
EcoT38I	GRGCYC	4 cut(s)	249, 1992, 2166, 2507
ErhI	CCWWGG	3 cut(s)	441, 724, 2240
FaeI	CATG	7 cut(s)	122, 2161, 2269, 2321, 2453, 2464, 2486
FalI	AAGNNNNNCTT	3 cut(s)	1903, 1935, 2635
FaqI	GGGAC	4 cut(s)	1144, 1313, 1436, 2258
FatI	CATG	7 cut(s)	118, 2157, 2265, 2317, 2449, 2460, 2482
FauNDI	CATATG	3 cut(s)	850, 1429, 1868
FbaI	TGATCA	2 cut(s)	534, 1863
FblI	GTMKAC	5 cut(s)	360, 545, 1363, 2270, 2373
Fnu4HI	GCNGC	6 cut(s)	273, 469, 1410, 1840, 2133, 2419
FokI	GGATG	3 cut(s)	707, 1299, 1749
FriOI	GRGCYC	4 cut(s)	249, 1992, 2166, 2507
Fsp4HI	GCNGC	6 cut(s)	273, 469, 1410, 1840, 2133, 2419
FspBI	CTAG	9 cut(s)	455, 558, 585, 704, 1134, 1604, 1703, 2115, 2175
GlaI	GCGC	4 cut(s)	467, 615, 1736, 2607
GluI	GCNGC	6 cut(s)	273, 469, 1410, 1840, 2133, 2419
GsuI	CTGGAG	3 cut(s)	1167, 1204, 1882
HaeII	RGCGCY	1 cut(s)	469
HaeIII	GGCC	6 cut(s)	188, 198, 855, 1258, 2099, 2403
HapII	CCGG	3 cut(s)	1227, 2081, 2479
HhaI	GCGC	4 cut(s)	468, 616, 1737, 2608
Hin1II	CATG	7 cut(s)	122, 2161, 2269, 2321, 2453, 2464, 2486
Hin6I	GCGC	4 cut(s)	466, 614, 1735, 2606
HinP1I	GCGC	4 cut(s)	466, 614, 1735, 2606
HincII	GTYRAC	2 cut(s)	1039, 2271
HindII	GTYRAC	2 cut(s)	1039, 2271
HindIII	AAGCTT	4 cut(s)	156, 1912, 2022, 2649
HpaII	CCGG	3 cut(s)	1227, 2081, 2479
HphI	GGTGA	3 cut(s)	458, 1941, 2070
Hpy188I	TCNGA	7 cut(s)	146, 345, 524, 567, 1656, 2293, 2494
Hpy188III	TCNNGA	9 cut(s)	769, 786, 980, 1184, 1318, 2204, 2318, 2500, 2615
Hpy99I	CGWCG	2 cut(s)	1338, 2039
HpyAV	CCTTC	5 cut(s)	702, 1502, 2089, 2348, 2390
HpyCH4III	ACNGT	5 cut(s)	184, 1247, 1349, 1933, 2472
HpyCH4IV	ACGT	1 cut(s)	222
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 253, 2348, 2357, 2366, 2400, 2427
HpyF3I	CTNAG	7 cut(s)	208, 804, 1272, 1655, 1986, 2003, 2414
HpySE526I	ACGT	1 cut(s)	222
Hsp92II	CATG	7 cut(s)	122, 2161, 2269, 2321, 2453, 2464, 2486
HspAI	GCGC	4 cut(s)	466, 614, 1735, 2606
KpnI	GGTACC	1 cut(s)	1439
Ksp22I	TGATCA	2 cut(s)	534, 1863
Kzo9I	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
LguI	GCTCTTC	2 cut(s)	2171, 2445
Lsp1109I	GCAGC	5 cut(s)	284, 455, 1396, 1851, 2119
LweI	GCATC	4 cut(s)	973, 1063, 1194, 1771
MaeI	CTAG	9 cut(s)	455, 558, 585, 704, 1134, 1604, 1703, 2115, 2175
MaeII	ACGT	1 cut(s)	222
MaeIII	GTNAC	6 cut(s)	134, 1385, 1422, 1684, 1780, 1947
MalI	GATC	9 cut(s)	336, 521, 536, 569, 690, 1253, 1865, 1925, 2613
MboI	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
MfeI	CAATTG	3 cut(s)	894, 1013, 1785
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	6 cut(s)	98, 249, 1234, 1992, 2166, 2507
MlsI	TGGCCA	1 cut(s)	188
MluI	ACGCGT	1 cut(s)	861
MluNI	TGGCCA	1 cut(s)	188
MlyI	GAGTC	7 cut(s)	490, 563, 1335, 1347, 1604, 2055, 2240
MmeI	TCCRAC	1 cut(s)	2517
Mox20I	TGGCCA	1 cut(s)	188
Mph1103I	ATGCAT	1 cut(s)	120
MroXI	GAANNNNTTC	1 cut(s)	995
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	7 cut(s)	822, 842, 959, 1065, 1169, 2030, 2073
MslI	CAYNNNNRTG	2 cut(s)	1115, 2216
Msp20I	TGGCCA	1 cut(s)	188
MspI	CCGG	3 cut(s)	1227, 2081, 2479
MspR9I	CCNGG	3 cut(s)	1227, 1260, 1479
MunI	CAATTG	3 cut(s)	894, 1013, 1785
Mva1269I	GAATGC	1 cut(s)	2624
MvaI	CCWGG	2 cut(s)	1260, 1479
MvnI	CGCG	2 cut(s)	863, 1284
MwoI	GCNNNNNNNGC	7 cut(s)	41, 253, 2348, 2357, 2366, 2400, 2427
NciI	CCSGG	1 cut(s)	1227
NdeI	CATATG	3 cut(s)	850, 1429, 1868
NdeII	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
NheI	GCTAGC	1 cut(s)	454
NlaIII	CATG	7 cut(s)	122, 2161, 2269, 2321, 2453, 2464, 2486
NlaIV	GGNNCC	5 cut(s)	199, 1219, 1437, 2011, 2402
NmuCI	GTSAC	3 cut(s)	134, 1780, 1947
NsiI	ATGCAT	1 cut(s)	120
NspI	RCATGY	2 cut(s)	2269, 2486
NspV	TTCGAA	1 cut(s)	319
PaeI	GCATGC	1 cut(s)	2486
PagI	TCATGA	1 cut(s)	2317
PaqCI	CACCTGC	1 cut(s)	2111
PceI	AGGCCT	1 cut(s)	2099
PciI	ACATGT	1 cut(s)	2265
PciSI	GCTCTTC	2 cut(s)	2171, 2445
PcsI	WCGNNNNNNNCGW	2 cut(s)	325, 2537
PctI	GAATGC	1 cut(s)	2624
PdmI	GAANNNNTTC	1 cut(s)	995
PkrI	GCNGC	6 cut(s)	274, 470, 1411, 1841, 2134, 2420
PleI	GAGTC	7 cut(s)	490, 562, 1334, 1346, 1603, 2055, 2240
PpsI	GAGTC	7 cut(s)	490, 562, 1334, 1346, 1603, 2055, 2240
PpuMI	RGGWCCY	1 cut(s)	2111
PscI	ACATGT	1 cut(s)	2265
PshAI	GACNNNNGTC	1 cut(s)	2527
Psp124BI	GAGCTC	3 cut(s)	249, 2166, 2507
Psp5II	RGGWCCY	1 cut(s)	2111
Psp6I	CCWGG	2 cut(s)	1258, 1477
PspGI	CCWGG	2 cut(s)	1258, 1477
PspN4I	GGNNCC	5 cut(s)	199, 1219, 1437, 2011, 2402
PspPI	GGNCC	4 cut(s)	197, 1058, 2111, 2401
PspPPI	RGGWCCY	1 cut(s)	2111
PstI	CTGCAG	1 cut(s)	2137
PstNI	CAGNNNCTG	1 cut(s)	1985
PsuI	RGATCY	1 cut(s)	688
RsaI	GTAC	6 cut(s)	603, 749, 1244, 1437, 1884, 2474
RsaNI	GTAC	6 cut(s)	602, 748, 1243, 1436, 1883, 2473
RseI	CAYNNNNRTG	2 cut(s)	1115, 2216
SacI	GAGCTC	3 cut(s)	249, 2166, 2507
SalI	GTCGAC	1 cut(s)	2269
SapI	GCTCTTC	2 cut(s)	2171, 2445
SaqAI	TTAA	7 cut(s)	822, 842, 959, 1065, 1169, 2030, 2073
SatI	GCNGC	6 cut(s)	273, 469, 1410, 1840, 2133, 2419
Sau3AI	GATC	9 cut(s)	334, 519, 534, 567, 688, 1251, 1863, 1923, 2611
Sau96I	GGNCC	4 cut(s)	197, 1058, 2111, 2401
ScaI	AGTACT	2 cut(s)	603, 2474
SchI	GAGTC	7 cut(s)	490, 563, 1335, 1347, 1604, 2055, 2240
ScrFI	CCNGG	3 cut(s)	1227, 1260, 1479
SduI	GDGCHC	6 cut(s)	98, 249, 1234, 1992, 2166, 2507
SfaNI	GCATC	4 cut(s)	973, 1063, 1194, 1771
SfcI	CTRYAG	3 cut(s)	213, 2133, 2514
SfuI	TTCGAA	1 cut(s)	319
SinI	GGWCC	2 cut(s)	1058, 2111
SmiMI	CAYNNNNRTG	2 cut(s)	1115, 2216
SmlI	CTYRAG	5 cut(s)	89, 767, 888, 1316, 1636
SmoI	CTYRAG	5 cut(s)	89, 767, 888, 1316, 1636
SpeI	ACTAGT	1 cut(s)	584
SphI	GCATGC	1 cut(s)	2486
SseBI	AGGCCT	1 cut(s)	2099
SsiI	CCGC	5 cut(s)	56, 1284, 2274, 2377, 2418
SspMI	CTAG	9 cut(s)	455, 558, 585, 704, 1134, 1604, 1703, 2115, 2175
SstI	GAGCTC	3 cut(s)	249, 2166, 2507
StuI	AGGCCT	1 cut(s)	2099
StyD4I	CCNGG	3 cut(s)	1225, 1258, 1477
StyI	CCWWGG	3 cut(s)	441, 724, 2240
TaaI	ACNGT	5 cut(s)	184, 1247, 1349, 1933, 2472
TaiI	ACGT	1 cut(s)	225
TaqII	GACCGA	1 cut(s)	1075
TatI	WGTACW	4 cut(s)	601, 747, 1242, 2472
TauI	GCSGC	1 cut(s)	2421
Tru1I	TTAA	7 cut(s)	822, 842, 959, 1065, 1169, 2030, 2073
Tru9I	TTAA	7 cut(s)	822, 842, 959, 1065, 1169, 2030, 2073
TseFI	GTSAC	3 cut(s)	134, 1780, 1947
TseI	GCWGC	5 cut(s)	272, 468, 1409, 1839, 2132
Tsp45I	GTSAC	3 cut(s)	134, 1780, 1947
TspDTI	ATGAA	7 cut(s)	468, 1214, 1646, 2306, 2348, 2438, 2655
TspGWI	ACGGA	2 cut(s)	788, 2313
VpaK11BI	GGWCC	2 cut(s)	1058, 2111
XagI	CCTNNNNNAGG	3 cut(s)	1956, 2118, 2239
XapI	RAATTY	2 cut(s)	776, 946
XceI	RCATGY	2 cut(s)	2269, 2486
XmiI	GTMKAC	5 cut(s)	360, 545, 1363, 2270, 2373
XmnI	GAANNNNTTC	1 cut(s)	995
XspI	CTAG	9 cut(s)	455, 558, 585, 704, 1134, 1604, 1703, 2115, 2175
ZrmI	AGTACT	2 cut(s)	603, 2474
Zsp2I	ATGCAT	1 cut(s)	120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.