FvH4_1g15430
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
8747626 .. 8751072
3447 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15430.t1

Sequence Viewer

Length: 1659 bp
ATGGTTATAGTAGGGGAGCTTGTAGGGGGTGCTGTTCTTGGAGCAGCATTTGGGGTGTTGTTTGATGTTGTCAAGAAAGCAGTTGACAAGCCTACTACCTTTAAATCCCTCCTTGAGAATATCAAGTTTTCACTGGAGTTTCTAAAGCCGGTGATTGAAAACATAGGTAAGCATAATGAAGAACTGATTCTCCCAGATGAAGAAATAGAGTATCTTATAACAGAAATGAAGCAGGGCGTAAAGCTTGTCCAGAAGTCATCAAAGGTCAGTAAGTGGAACTGCATGAAGTCTTATTACACGGATCAACTTATTGAATTGGATGCTTCTCTTAAAAGACTTTTCCAAATATTGATGGTACAAGGAGTAAGGGATGCAAAGGAGACCTTAATTTTGGCAAGAAAGAACACTAGCCAGCTTACTGAATCGGTAAAGGATGGAAAGGAGACCTTAGAATTGGCAAGAAAATACACTGAACAATCAGCAAGAGATGGGAAGGAGACCTTGGTTTTGGCTAGGAAAACTAGAAGGTTGCTCAAACAAATTGAACATATAGTGACTTGCACTTCTAAAGTGAAACATAAACATGTGTCCTCCACAGTGTTAGTTACACCAGCTAACCAACAAGTCACGGCCCACAGCAGGAACAAAATTTCCAATGCGAGCAGTAGGGCAGGAACAAGTCGAGTTTTGGAGGCATCCAACTTGATAGTCTACCAATTCTCCGAGTTGGCCAATGCTACAGAGAATTTCAAGTTTAGTAAGGGAGACTTTGCAGGGACTTTCAAGGGTTGGGTGGATGAGAATACACTTGTTCCGTCCAAGGTTGTCACTGGAATGACTGTTGCTGTCAAGAGATTGAACCAAGAAAGTGTCGAAGACCTTAAACAGTGGGAGCTCTCAGTGAACTTCCTTGGAAGGCTTTCTCACCCCAACCTAGTCAAGCTATTGGGATACTGTCGAGACAAAAAGGAATTGCTCTTAGTTTATGAGTTCATGCCGAATGGAAGCTTATTTAATCGTCTGTCTGAAAGAAAACCTGATGAGGAACCGCTATGTTGGCACAAGAGACTAAAAATCGCTATTGGAGCTGCTAGAGTCTTGAGTTTGTTGCACATTTTACAAATTATACACAGAGATATCACACCCTCGAACATATTGCTTGATGAGGACTACAATACAAAAATCATGGATTTTTCCTTGTCAGAATGGGCGCCAGCTGAAGGAAAGTTGCATGTGTCAACAAAAATTTGTGGCACAATGGGTTACATTGATCCTGAATACTTGAGAACAGGTCATTTGTCTGTGAAGAGTGATGTGTATAGCTTCGGCGTTGTGCTGCTTGAGATGCTGACAGGGTTAAAGACAATCGATTTTGACCGCCCTAAGGAACAAATCAAACTGGTTGATTGGGCTACACCACTTCTTTGTGATGAAACAAAGTTGCAAACCATCATGGATGAGCAGATCAAGGGACAATGTTCCTCCCGGGAAGCATTACAGACAGGAGAGCTTGCACTAAGATGTTTACAAACAGATCCTGAAAGACGACCTTCCATGAAAGAAGTTGTGGAGGAATTAGAACACGTCCGGGGATTGAAGGAAGAACCAACCCCGTCCGAGCTTACCACCATACAGTCTTCTTCTACATCTCCACAATGA

Protein Analysis

553

Amino Acids

62.26

Weight (kDa)

7.97

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 139 2.6e-30 Arabidopsis broad-spectrum mildew resistance protein RPW8
PK_Tyr_Ser-Thr PF07714 253 - 526 3e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 277 - 524 1.3e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 1210
AccI GTMKAC 1 cut(s) 711
AciI CCGC 2 cut(s) 1049, 1378
AclWI GGATC 3 cut(s) 309, 1265, 1529
AcoI YGGCCR 1 cut(s) 729
AcsI RAATTY 3 cut(s) 648, 745, 1245
AcuI CTGAAG 1 cut(s) 1239
AcyI GRCGYC 1 cut(s) 1211
AfaI GTAC 1 cut(s) 357
AfiI CCNNNNNNNGG 3 cut(s) 639, 1220, 1384
AflIII ACRYGT 2 cut(s) 583, 1582
AgsI TTSAA 7 cut(s) 158, 314, 545, 751, 784, 859, 1597
AjiI CACGTC 1 cut(s) 1585
AjuI GAANNNNNNNTTGG 2 cut(s) 485, 517
AloI GAACNNNNNNTCC 4 cut(s) 174, 206, 635, 667
Alw21I GWGCWC 1 cut(s) 897
Alw26I GTCTC 6 cut(s) 374, 437, 491, 759, 954, 1060
AlwI GGATC 3 cut(s) 309, 1265, 1529
AlwNI CAGNNNCTG 1 cut(s) 1538
Ama87I CYCGRG 1 cut(s) 1485
AoxI GGCC 2 cut(s) 630, 729
ApeKI GCWGC 3 cut(s) 44, 1088, 1336
ApoI RAATTY 3 cut(s) 648, 745, 1245
ArsI GACNNNNNNTTYG 4 cut(s) 373, 405, 490, 522
Asp700I GAANNNNTTC 2 cut(s) 186, 919
AspLEI GCGC 1 cut(s) 1213
AspS9I GGNCC 1 cut(s) 631
AsuC2I CCSGG 3 cut(s) 1486, 1487, 1589
AsuHPI GGTGA 2 cut(s) 163, 917
AvaI CYCGRG 1 cut(s) 1485
AxyI CCTNAGG 1 cut(s) 1383
BalI TGGCCA 1 cut(s) 731
BanI GGYRCC 1 cut(s) 1210
BanII GRGCYC 1 cut(s) 897
BarI GAAGNNNNNNTAC 2 cut(s) 278, 310
BbsI GAAGAC 2 cut(s) 882, 1629
Bbv12I GWGCWC 1 cut(s) 897
BbvI GCAGC 3 cut(s) 56, 1075, 1323
BccI CCATC 4 cut(s) 346, 428, 482, 1457
BceAI ACGGC 1 cut(s) 645
BcgI CGANNNNNNTGC 2 cut(s) 1138, 1172
BciVI GTATCC 1 cut(s) 944
BcnI CCSGG 3 cut(s) 1486, 1487, 1589
BcoDI GTCTC 6 cut(s) 374, 437, 491, 759, 954, 1060
BfaI CTAG 5 cut(s) 408, 513, 522, 935, 1092
BfmI CTRYAG 1 cut(s) 738
BfoI RGCGCY 1 cut(s) 1214
BfuI GTATCC 1 cut(s) 944
BisI GCNGC 3 cut(s) 45, 1089, 1337
BlsI GCNGC 3 cut(s) 46, 1090, 1338
Bme1390I CCNGG 3 cut(s) 1486, 1487, 1589
BmeT110I CYCGRG 1 cut(s) 1485
BmgBI CACGTC 1 cut(s) 1585
BmgT120I GGNCC 1 cut(s) 631
BmiI GGNNCC 2 cut(s) 1047, 1212
BmrFI CCNGG 3 cut(s) 1486, 1487, 1589
BmsI GCATC 4 cut(s) 310, 361, 704, 1335
BpiI GAAGAC 2 cut(s) 882, 1629
BpmI CTGGAG 1 cut(s) 155
BpuEI CTTGAG 4 cut(s) 134, 1120, 1303, 1361
BpuMI CCSGG 3 cut(s) 1486, 1487, 1589
Bsa29I ATCGAT 1 cut(s) 1368
BsaHI GRCGYC 1 cut(s) 1211
BsaI GGTCTC 3 cut(s) 374, 437, 491
BsaJI CCNNGG 5 cut(s) 501, 819, 910, 1485, 1588
BsaXI ACNNNNNCTCC 4 cut(s) 174, 204, 704, 734
Bsc4I CCNNNNNNNGG 3 cut(s) 639, 1220, 1384
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 3 cut(s) 138, 835, 1404
Bse21I CCTNAGG 1 cut(s) 1383
BseCI ATCGAT 1 cut(s) 1368
BseDI CCNNGG 5 cut(s) 501, 819, 910, 1485, 1588
BseGI GGATG 6 cut(s) 325, 376, 439, 695, 802, 1462
BseLI CCNNNNNNNGG 3 cut(s) 639, 1220, 1384
BseMII CTCAG 1 cut(s) 912
BseNI ACTGG 3 cut(s) 138, 835, 1404
BseXI GCAGC 3 cut(s) 56, 1075, 1323
BshFI GGCC 2 cut(s) 632, 731
BshNI GGYRCC 1 cut(s) 1210
BshVI ATCGAT 1 cut(s) 1368
BsiHKAI GWGCWC 1 cut(s) 897
BsiHKCI CYCGRG 1 cut(s) 1485
BsiSI CCGG 3 cut(s) 149, 1486, 1588
BslFI GGGAC 2 cut(s) 790, 1485
BslI CCNNNNNNNGG 3 cut(s) 639, 1220, 1384
BsmAI GTCTC 6 cut(s) 374, 437, 491, 759, 954, 1060
BsmFI GGGAC 2 cut(s) 790, 1485
BsnI GGCC 2 cut(s) 632, 731
Bso31I GGTCTC 3 cut(s) 374, 437, 491
BsoBI CYCGRG 1 cut(s) 1485
Bsp1286I GDGCHC 1 cut(s) 897
Bsp143I GATC 4 cut(s) 301, 1270, 1464, 1534
BspACI CCGC 2 cut(s) 1049, 1378
BspANI GGCC 2 cut(s) 632, 731
BspCNI CTCAG 1 cut(s) 911
BspDI ATCGAT 1 cut(s) 1368
BspLI GGNNCC 2 cut(s) 1047, 1212
BspPI GGATC 3 cut(s) 309, 1265, 1529
BspT107I GGYRCC 1 cut(s) 1210
BspTNI GGTCTC 3 cut(s) 374, 437, 491
BsrFI RCCGGY 1 cut(s) 148
BsrI ACTGG 3 cut(s) 138, 835, 1404
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 5 cut(s) 501, 819, 910, 1485, 1588
BssMI GATC 4 cut(s) 301, 1270, 1464, 1534
BssNI GRCGYC 1 cut(s) 1211
BssT1I CCWWGG 3 cut(s) 501, 819, 910
Bst4CI ACNGT 5 cut(s) 598, 841, 888, 956, 1635
Bst6I CTCTTC 1 cut(s) 1301
BstACI GRCGYC 1 cut(s) 1211
BstC8I GCNNGC 4 cut(s) 413, 661, 1215, 1512
BstDEI CTNAG 5 cut(s) 448, 898, 979, 1383, 1517
BstF5I GGATG 6 cut(s) 325, 376, 439, 695, 802, 1462
BstH2I RGCGCY 1 cut(s) 1214
BstHHI GCGC 1 cut(s) 1213
BstKTI GATC 4 cut(s) 304, 1273, 1467, 1537
BstMAI GTCTC 6 cut(s) 374, 437, 491, 759, 954, 1060
BstMBI GATC 4 cut(s) 301, 1270, 1464, 1534
BstMWI GCNNNNNNNGC 3 cut(s) 1057, 1085, 1345
BstNSI RCATGY 2 cut(s) 587, 1235
BstSCI CCNGG 3 cut(s) 1484, 1485, 1587
BstSFI CTRYAG 1 cut(s) 738
BstV1I GCAGC 3 cut(s) 56, 1075, 1323
BstV2I GAAGAC 2 cut(s) 882, 1629
BstX2I RGATCY 1 cut(s) 1534
BstYI RGATCY 1 cut(s) 1534
Bsu15I ATCGAT 1 cut(s) 1368
Bsu36I CCTNAGG 1 cut(s) 1383
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 2 cut(s) 632, 731
BsuTUI ATCGAT 1 cut(s) 1368
BtrI CACGTC 1 cut(s) 1585
BtsCI GGATG 6 cut(s) 325, 376, 439, 695, 802, 1462
BtsIMutI CAGTG 6 cut(s) 131, 468, 603, 828, 893, 906
Cac8I GCNNGC 4 cut(s) 413, 661, 1215, 1512
CaiI CAGNNNCTG 1 cut(s) 1538
CfoI GCGC 1 cut(s) 1213
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 631
Cfr9I CCCGGG 1 cut(s) 1485
ClaI ATCGAT 1 cut(s) 1368
Csp6I GTAC 1 cut(s) 356
CviAII CATG 7 cut(s) 283, 584, 994, 1186, 1232, 1453, 1555
CviQI GTAC 1 cut(s) 356
DdeI CTNAG 5 cut(s) 448, 898, 979, 1383, 1517
DinI GGCGCC 1 cut(s) 1212
DpnI GATC 4 cut(s) 303, 1272, 1466, 1536
DpnII GATC 4 cut(s) 301, 1270, 1464, 1534
DraI TTTAAA 1 cut(s) 103
EaeI YGGCCR 1 cut(s) 729
Eam1104I CTCTTC 1 cut(s) 1301
EarI CTCTTC 1 cut(s) 1301
Ecl136II GAGCTC 1 cut(s) 895
Eco130I CCWWGG 3 cut(s) 501, 819, 910
Eco24I GRGCYC 1 cut(s) 897
Eco31I GGTCTC 3 cut(s) 374, 437, 491
Eco32I GATATC 1 cut(s) 1138
Eco53kI GAGCTC 1 cut(s) 895
Eco57I CTGAAG 1 cut(s) 1239
Eco81I CCTNAGG 1 cut(s) 1383
Eco88I CYCGRG 1 cut(s) 1485
EcoICRI GAGCTC 1 cut(s) 895
EcoRV GATATC 1 cut(s) 1138
EcoT14I CCWWGG 3 cut(s) 501, 819, 910
EcoT38I GRGCYC 1 cut(s) 897
EgeI GGCGCC 1 cut(s) 1212
EheI GGCGCC 1 cut(s) 1212
ErhI CCWWGG 3 cut(s) 501, 819, 910
FaeI CATG 7 cut(s) 286, 587, 997, 1189, 1235, 1456, 1558
FaqI GGGAC 2 cut(s) 790, 1485
FatI CATG 7 cut(s) 282, 583, 993, 1185, 1231, 1452, 1554
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 3 cut(s) 45, 1089, 1337
FokI GGATG 6 cut(s) 332, 383, 446, 682, 809, 1469
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 3 cut(s) 45, 1089, 1337
FspBI CTAG 5 cut(s) 408, 513, 522, 935, 1092
GlaI GCGC 1 cut(s) 1212
GluI GCNGC 3 cut(s) 45, 1089, 1337
GsuI CTGGAG 1 cut(s) 155
HaeII RGCGCY 1 cut(s) 1214
HaeIII GGCC 2 cut(s) 632, 731
HapII CCGG 3 cut(s) 149, 1486, 1588
HhaI GCGC 1 cut(s) 1213
Hin1I GRCGYC 1 cut(s) 1211
Hin1II CATG 7 cut(s) 286, 587, 997, 1189, 1235, 1456, 1558
Hin6I GCGC 1 cut(s) 1211
HinP1I GCGC 1 cut(s) 1211
HincII GTYRAC 2 cut(s) 85, 1239
HindII GTYRAC 2 cut(s) 85, 1239
HindIII AAGCTT 2 cut(s) 242, 1006
HinfI GANTC 3 cut(s) 187, 422, 1095
HpaII CCGG 3 cut(s) 149, 1486, 1588
HphI GGTGA 2 cut(s) 163, 917
Hpy166II GTNNAC 5 cut(s) 85, 712, 904, 1239, 1526
Hpy188I TCNGA 4 cut(s) 724, 1027, 1204, 1618
Hpy188III TCNNGA 7 cut(s) 73, 250, 850, 959, 1099, 1274, 1538
Hpy8I GTNNAC 5 cut(s) 85, 712, 904, 1239, 1526
HpyAV CCTTC 6 cut(s) 487, 519, 909, 1214, 1560, 1591
HpyCH4III ACNGT 5 cut(s) 598, 841, 888, 956, 1635
HpyCH4IV ACGT 1 cut(s) 1584
HpyCH4V TGCA 8 cut(s) 282, 374, 561, 773, 1111, 1231, 1444, 1514
HpyF10VI GCNNNNNNNGC 3 cut(s) 1057, 1085, 1345
HpyF3I CTNAG 5 cut(s) 448, 898, 979, 1383, 1517
HpySE526I ACGT 1 cut(s) 1584
Hsp92I GRCGYC 1 cut(s) 1211
Hsp92II CATG 7 cut(s) 286, 587, 997, 1189, 1235, 1456, 1558
HspAI GCGC 1 cut(s) 1211
KasI GGCGCC 1 cut(s) 1210
Kzo9I GATC 4 cut(s) 301, 1270, 1464, 1534
LmnI GCTCC 4 cut(s) 16, 41, 892, 1085
Lsp1109I GCAGC 3 cut(s) 56, 1075, 1323
LweI GCATC 4 cut(s) 310, 361, 704, 1335
MaeI CTAG 5 cut(s) 408, 513, 522, 935, 1092
MaeII ACGT 1 cut(s) 1584
MaeIII GTNAC 5 cut(s) 553, 604, 625, 826, 1262
MalI GATC 4 cut(s) 303, 1272, 1466, 1536
MboI GATC 4 cut(s) 301, 1270, 1464, 1534
MboII GAAGA 7 cut(s) 191, 212, 887, 1318, 1613, 1629, 1632
MflI RGATCY 1 cut(s) 1534
MhlI GDGCHC 1 cut(s) 897
MlsI TGGCCA 1 cut(s) 731
MluNI TGGCCA 1 cut(s) 731
Mly113I GGCGCC 1 cut(s) 1211
MlyI GAGTC 1 cut(s) 1104
MmeI TCCRAC 1 cut(s) 723
MnlI CCTC 8 cut(s) 119, 601, 685, 1036, 1156, 1159, 1492, 1564
Mox20I TGGCCA 1 cut(s) 731
MroXI GAANNNNTTC 2 cut(s) 186, 919
MscI TGGCCA 1 cut(s) 731
MseI TTAA 6 cut(s) 102, 330, 386, 882, 1014, 1358
MslI CAYNNNNRTG 3 cut(s) 582, 833, 1519
Msp20I TGGCCA 1 cut(s) 731
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 3 cut(s) 149, 1486, 1588
MspR9I CCNGG 3 cut(s) 1486, 1487, 1589
MwoI GCNNNNNNNGC 3 cut(s) 1057, 1085, 1345
NarI GGCGCC 1 cut(s) 1211
NciI CCSGG 3 cut(s) 1486, 1487, 1589
NdeII GATC 4 cut(s) 301, 1270, 1464, 1534
NlaIII CATG 7 cut(s) 286, 587, 997, 1189, 1235, 1456, 1558
NlaIV GGNNCC 2 cut(s) 1047, 1212
NmuCI GTSAC 3 cut(s) 553, 625, 826
NspI RCATGY 2 cut(s) 587, 1235
PciI ACATGT 1 cut(s) 583
PdmI GAANNNNTTC 2 cut(s) 186, 919
PfeI GAWTC 2 cut(s) 187, 422
PkrI GCNGC 3 cut(s) 46, 1090, 1338
PleI GAGTC 1 cut(s) 1103
PluTI GGCGCC 1 cut(s) 1214
PpsI GAGTC 1 cut(s) 1103
PscI ACATGT 1 cut(s) 583
PsiI TTATAA 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 897
PspN4I GGNNCC 2 cut(s) 1047, 1212
PspPI GGNCC 1 cut(s) 631
PstNI CAGNNNCTG 1 cut(s) 1538
PsuI RGATCY 1 cut(s) 1534
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 1 cut(s) 357
RsaNI GTAC 1 cut(s) 356
RseI CAYNNNNRTG 3 cut(s) 582, 833, 1519
SacI GAGCTC 1 cut(s) 897
SaqAI TTAA 6 cut(s) 102, 330, 386, 882, 1014, 1358
SatI GCNGC 3 cut(s) 45, 1089, 1337
Sau3AI GATC 4 cut(s) 301, 1270, 1464, 1534
Sau96I GGNCC 1 cut(s) 631
SchI GAGTC 1 cut(s) 1104
ScrFI CCNGG 3 cut(s) 1486, 1487, 1589
SduI GDGCHC 1 cut(s) 897
SfaNI GCATC 4 cut(s) 310, 361, 704, 1335
SfcI CTRYAG 1 cut(s) 738
SfoI GGCGCC 1 cut(s) 1212
SmaI CCCGGG 1 cut(s) 1487
SmiMI CAYNNNNRTG 3 cut(s) 582, 833, 1519
SmlI CTYRAG 4 cut(s) 113, 1099, 1282, 1340
SmoI CTYRAG 4 cut(s) 113, 1099, 1282, 1340
SsiI CCGC 2 cut(s) 1049, 1378
SspDI GGCGCC 1 cut(s) 1210
SspI AATATT 1 cut(s) 348
SspMI CTAG 5 cut(s) 408, 513, 522, 935, 1092
SstI GAGCTC 1 cut(s) 897
StyD4I CCNGG 3 cut(s) 1484, 1485, 1587
StyI CCWWGG 3 cut(s) 501, 819, 910
TaaI ACNGT 5 cut(s) 598, 841, 888, 956, 1635
TaiI ACGT 1 cut(s) 1587
TaqI TCGA 5 cut(s) 682, 873, 958, 1148, 1368
TfiI GAWTC 2 cut(s) 187, 422
Tru1I TTAA 6 cut(s) 102, 330, 386, 882, 1014, 1358
Tru9I TTAA 6 cut(s) 102, 330, 386, 882, 1014, 1358
TscAI CASTG 6 cut(s) 138, 475, 603, 835, 893, 906
TseFI GTSAC 3 cut(s) 553, 625, 826
TseI GCWGC 3 cut(s) 44, 1088, 1336
Tsp45I GTSAC 3 cut(s) 553, 625, 826
TspDTI ATGAA 7 cut(s) 192, 213, 242, 299, 982, 1446, 1571
TspGWI ACGGA 2 cut(s) 314, 804
TspMI CCCGGG 1 cut(s) 1485
TspRI CASTG 6 cut(s) 138, 475, 603, 835, 893, 906
XapI RAATTY 3 cut(s) 648, 745, 1245
XceI RCATGY 2 cut(s) 587, 1235
XmaI CCCGGG 1 cut(s) 1485
XmiI GTMKAC 1 cut(s) 711
XmnI GAANNNNTTC 2 cut(s) 186, 919
XspI CTAG 5 cut(s) 408, 513, 522, 935, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.