Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001931

Physical Location & Seq

Genomic Coordinates Forward (+)

10440202 .. 10443950

Gene Structure 3749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0121000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGTCTCGGTGTTTTCCTTACCCTCCTCCCGGGTATGTGAAGAAGGGGATCTGCGATGAGGCTTTGATCGAACCGATTAAGCTCCAAGGAGAAGCTGAGAAGGCCAAGAAAGAAAAGAAGAGAGAGAAAAAACGAGAGAAGAAAGAAAAGAAGGCTAGAGAAAATGGGGAGGTTGAAGACAAGAAGCACCATCACAAAAAAGGGAACAAAGATGAAAGGCAACAAGAAGATGAGAAAGTCAGGGAACATGGCAAGAAGAGAGAACGTGAAGAAGCTGAAATTCTGGACATGAGTACCCTAACGGAAGAGCATCCAGTTGGTTCCCAGAATTCTTCTGACAGTACCGTTAACAGCAATAACAGCAACAAAAGGCAGAAGCAGAACTTGTCTCCTGAGTGCAGGCAAAATACCGGGAGTATTCTTCGTATCCGGTTGCCTCTCCAAAGGCACAAAGATCAAGAAGTGCTACCGAGAGAGGACTTGCCTTCCCGGTTGCCTCCCCAAAGGCACAAAGATCAAGAAGTGCTACCGAGAGAGGACTTGCCTTCCCGGTTGCCTCCCCACAGGAACAATGCTCCAGAGGAACAGCCTTTTCGGTTGCCTCTCCAAAGGACCAATGCTCCAGAAGTTTCTCCCAGAGAGAAACTGCCTAGCCGGTTGCCTCTTCAAAGAAACAAAGATTCAGCATTGTTACCCAAAGAGGAACAGCCTTGCAGGTTGCCTCTACAAAGGAACAAACATCTGGAAGTGTTGCCCAAAGAGGAACAACCCTGCAGGTTGCCTCTACAAAGGAACAAACATCTGGAAGTGTTGCCCAAAGAGGAACAACCCTGCAGGTTGCCTCTTAAGACACAGAAAGAACCACCAGTGCTAACTCGAGAGAAACAGCCTTCTCTTAAAAGGCAAAAGGATCAAGATGTTCTACCCAAAGAGAAAAAGACTTGCCTGGTGTCTCTCCAAAGGACCAAGGATTCAGAAGTATTACCCAGGGAGAAACAACAGCCTAGCCAGCTGCCTCTCCAAGCGAACAAAGATCAAAAAATAGTACCCAGGGAGAAACAGCTTAGCCAGTTGCCTCTCCAAAGGAACAAGGATCCAGCAGTGCTATCTAGAGAGGAACAGCCCAGCCAGTTGCTTCTCCAAAAGCAGAAAGTTCCACAAGTGCTGCTCAGAGAAGAACAGCCGTGTTCTGTCTCTGGAAGGACTGGTGATGCCTCTGTTCAAGGTAGGTGTGAACCTGCTCCTGTACTTGGAAGGGATGTGGGAGAAAAACCCTGTTCTACTTCTGGAATTGAGGGCAAAGAAGACCGAAAAAGCAAGCGAAGAGCATCACAATACATAGAGCTATTTGAGAAATGGGTTGAGCCTCCTCTTTTATTAAGTTTACCACCCACAGATATTGATGATGATCAGGGATGGTTGCTTAAGACGAATAAGAACCCAAACTGTGGGGTTGAGAAATGTGTTGCTGCCAGTGACAGCTTGAGCTGTGGAGACTCGGTGTCTTGGCCACATGCTCGCCTCTTGCCTGAGGTTGATATATATGCTTTGCCATATACCGTACCATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

523

Amino Acids

60.2

Weight (kDa)

9.22

Isoelectric Point (pI)

76.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001931)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g15270 FvH4_1g15350 FvH4_1g15430
rosa_chinensis	RchiOBHm_Chr2g0104571 RchiOBHm_Chr2g0104621 RchiOBHm_Chr2g0104631 RchiOBHm_Chr2g0104641
rosa_laevigata	RLG00000017191 RLG00000017336 RLG00000017337 RLG00000017338
rosa_multiflora	Rmu_sc0002316.1_g000034 Rmu_sc0002316.1_g000036 Rmu_sc0002316.1_g000045 Rmu_sc0002316.1_g000046
rosa_roxburghii	Rroxscaffold_2G00138880 Rroxscaffold_2G00138890 Rroxscaffold_2G00138930 Rroxscaffold_2G00138940
rosa_rugosa	Rorug02G0121000 Rorug02G0121100 Rorug02G0121200 Rorug02G0121300 Rorug02G0121300 Rorug02G0121400 Rorug02G0121500 Rorug02G0121600 Rorug02G0121600 Rorug02G0121700
rosa_samantha	Rh2AG171400 Rh2AG171700 Rh2AG171800 Rh2BG178700 Rh2BG178800 Rh2BG179100 Rh2BG179200 Rh2BG179300 Rh2CG176300 Rh2CG176600 Rh2DG177400 Rh2DG177500 Rh2DG178000 Rh2DG178100
rosa_wichuraiana	Rw2G013400 Rw2G013420 Rw2G013440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	4 cut(s)	705, 765, 825, 1246
AccB7I	CCANNNNNTGG	1 cut(s)	1448
AclWI	GGATC	4 cut(s)	56, 918, 1088, 1101
AcoI	YGGCCR	1 cut(s)	1508
AcsI	RAATTY	2 cut(s)	279, 328
AfaI	GTAC	5 cut(s)	295, 343, 1047, 1248, 1563
AfiI	CCNNNNNNNGG	3 cut(s)	29, 1250, 1448
AflII	CTTAAG	2 cut(s)	845, 1424
AgsI	TTSAA	3 cut(s)	176, 668, 1223
AhdI	GACNNNNNGTC	1 cut(s)	1501
AjnI	CCWGG	3 cut(s)	945, 986, 1049
AluBI	AGCT	8 cut(s)	82, 95, 275, 1012, 1063, 1345, 1482, 1488
AluI	AGCT	8 cut(s)	82, 95, 275, 1012, 1063, 1345, 1482, 1488
Alw26I	GTCTC	5 cut(s)	9, 393, 957, 1198, 1488
AlwI	GGATC	4 cut(s)	56, 918, 1088, 1101
Ama87I	CYCGRG	2 cut(s)	29, 876
AoxI	GGCC	2 cut(s)	102, 1508
ApeKI	GCWGC	3 cut(s)	1012, 1165, 1469
ApoI	RAATTY	2 cut(s)	279, 328
AspS9I	GGNCC	2 cut(s)	612, 963
AsuC2I	CCSGG	5 cut(s)	30, 31, 412, 490, 550
AsuHPI	GGTGA	1 cut(s)	1220
AvaI	CYCGRG	2 cut(s)	29, 876
AvaII	GGWCC	2 cut(s)	612, 963
AxyI	CCTNAGG	1 cut(s)	1530
BaeI	ACNNNNGTAYC	2 cut(s)	277, 310
BalI	TGGCCA	1 cut(s)	1510
BamHI	GGATCC	1 cut(s)	1093
BbsI	GAAGAC	2 cut(s)	183, 1311
BbvI	GCAGC	3 cut(s)	999, 1152, 1456
BccI	CCATC	2 cut(s)	198, 1410
BceAI	ACGGC	1 cut(s)	1168
BciT130I	CCWGG	3 cut(s)	947, 988, 1051
BciVI	GTATCC	1 cut(s)	437
BclI	TGATCA	1 cut(s)	1408
BcnI	CCSGG	5 cut(s)	30, 31, 412, 490, 550
BcoDI	GTCTC	5 cut(s)	9, 393, 957, 1198, 1488
BfaI	CTAG	4 cut(s)	156, 651, 1005, 1110
BfmI	CTRYAG	2 cut(s)	772, 832
BfrI	CTTAAG	2 cut(s)	845, 1424
BfuAI	ACCTGC	4 cut(s)	705, 765, 825, 1246
BfuI	GTATCC	1 cut(s)	437
BisI	GCNGC	3 cut(s)	1013, 1166, 1470
BlpI	GCTNAGC	1 cut(s)	1064
BlsI	GCNGC	3 cut(s)	1014, 1167, 1471
Bme1390I	CCNGG	8 cut(s)	30, 31, 412, 490, 550, 947, 988, 1051
Bme18I	GGWCC	2 cut(s)	612, 963
BmeRI	GACNNNNNGTC	1 cut(s)	1501
BmeT110I	CYCGRG	2 cut(s)	29, 876
BmgT120I	GGNCC	2 cut(s)	612, 963
BmiI	GGNNCC	2 cut(s)	322, 1095
BmrFI	CCNGG	8 cut(s)	30, 31, 412, 490, 550, 947, 988, 1051
BmsI	GCATC	3 cut(s)	319, 1201, 1337
BpiI	GAAGAC	2 cut(s)	183, 1311
BpmI	CTGGAG	2 cut(s)	561, 606
Bpu1102I	GCTNAGC	1 cut(s)	1064
BpuEI	CTTGAG	1 cut(s)	1504
BpuMI	CCSGG	5 cut(s)	30, 31, 412, 490, 550
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaJI	CCNNGG	7 cut(s)	29, 85, 966, 986, 987, 1049, 1050
BsaWI	WCCGGW	1 cut(s)	429
BsaXI	ACNNNNNCTCC	4 cut(s)	604, 634, 1485, 1515
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 1250, 1448
Bse118I	RCCGGY	1 cut(s)	654
Bse1I	ACTGG	6 cut(s)	314, 866, 1069, 1129, 1210, 1473
Bse21I	CCTNAGG	1 cut(s)	1530
Bse8I	GATNNNNATC	1 cut(s)	1407
BseBI	CCWGG	3 cut(s)	947, 988, 1051
BseDI	CCNNGG	7 cut(s)	29, 85, 966, 986, 987, 1049, 1050
BseGI	GGATG	3 cut(s)	310, 1264, 1421
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	3 cut(s)	29, 1250, 1448
BseMII	CTCAG	4 cut(s)	87, 384, 1183, 1521
BseNI	ACTGG	6 cut(s)	314, 866, 1069, 1129, 1210, 1473
BseRI	GAGGAG	2 cut(s)	15, 1359
BseXI	GCAGC	3 cut(s)	999, 1152, 1456
BseYI	CCCAGC	1 cut(s)	1124
BsgI	GTGCAG	1 cut(s)	418
BshFI	GGCC	2 cut(s)	104, 1510
BsiHKCI	CYCGRG	2 cut(s)	29, 876
BsiSI	CCGG	6 cut(s)	30, 411, 430, 490, 550, 655
BslI	CCNNNNNNNGG	3 cut(s)	29, 1250, 1448
BsmAI	GTCTC	5 cut(s)	9, 393, 957, 1198, 1488
BsnI	GGCC	2 cut(s)	104, 1510
BsoBI	CYCGRG	2 cut(s)	29, 876
Bsp143I	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
Bsp1720I	GCTNAGC	1 cut(s)	1064
BspANI	GGCC	2 cut(s)	104, 1510
BspCNI	CTCAG	4 cut(s)	88, 385, 1182, 1522
BspLI	GGNNCC	2 cut(s)	322, 1095
BspMAI	CTGCAG	2 cut(s)	776, 836
BspMI	ACCTGC	4 cut(s)	705, 765, 825, 1246
BspPI	GGATC	4 cut(s)	56, 918, 1088, 1101
BspQI	GCTCTTC	2 cut(s)	300, 1318
BspTI	CTTAAG	2 cut(s)	845, 1424
BsrFI	RCCGGY	1 cut(s)	654
BsrI	ACTGG	6 cut(s)	314, 866, 1069, 1129, 1210, 1473
BssAI	RCCGGY	1 cut(s)	654
BssECI	CCNNGG	7 cut(s)	29, 85, 966, 986, 987, 1049, 1050
BssMI	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
BssT1I	CCWWGG	2 cut(s)	85, 966
Bst2UI	CCWGG	3 cut(s)	947, 988, 1051
Bst4CI	ACNGT	4 cut(s)	341, 346, 1448, 1561
Bst6I	CTCTTC	5 cut(s)	113, 251, 300, 669, 1318
BstAFI	CTTAAG	2 cut(s)	845, 1424
BstC8I	GCNNGC	4 cut(s)	401, 1010, 1319, 1519
BstDEI	CTNAG	5 cut(s)	96, 393, 1064, 1169, 1530
BstF5I	GGATG	3 cut(s)	310, 1264, 1421
BstKTI	GATC	8 cut(s)	51, 69, 457, 517, 913, 1036, 1096, 1411
BstMAI	GTCTC	5 cut(s)	9, 393, 957, 1198, 1488
BstMBI	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
BstMWI	GCNNNNNNNGC	3 cut(s)	101, 360, 1009
BstNI	CCWGG	3 cut(s)	947, 988, 1051
BstNSI	RCATGY	1 cut(s)	1517
BstSCI	CCNGG	8 cut(s)	28, 29, 410, 488, 548, 945, 986, 1049
BstSFI	CTRYAG	2 cut(s)	772, 832
BstV1I	GCAGC	3 cut(s)	999, 1152, 1456
BstV2I	GAAGAC	2 cut(s)	183, 1311
BstX2I	RGATCY	2 cut(s)	48, 1093
BstYI	RGATCY	2 cut(s)	48, 1093
Bsu36I	CCTNAGG	1 cut(s)	1530
BsuI	GTATCC	1 cut(s)	437
BsuRI	GGCC	2 cut(s)	104, 1510
BtgZI	GCGATG	1 cut(s)	69
BtsCI	GGATG	3 cut(s)	310, 1264, 1421
BtsI	GCAGTG	1 cut(s)	1107
BtsIMutI	CAGTG	3 cut(s)	873, 1107, 1480
BveI	ACCTGC	4 cut(s)	705, 765, 825, 1246
Cac8I	GCNNGC	4 cut(s)	401, 1010, 1319, 1519
Cfr10I	RCCGGY	1 cut(s)	654
Cfr13I	GGNCC	2 cut(s)	612, 963
Cfr9I	CCCGGG	1 cut(s)	29
Csp6I	GTAC	5 cut(s)	294, 342, 1046, 1247, 1562
CspCI	CAANNNNNGTGG	2 cut(s)	1381, 1416
CviAII	CATG	3 cut(s)	248, 289, 1514
CviQI	GTAC	5 cut(s)	294, 342, 1046, 1247, 1562
DdeI	CTNAG	5 cut(s)	96, 393, 1064, 1169, 1530
DpnI	GATC	8 cut(s)	50, 68, 456, 516, 912, 1035, 1095, 1410
DpnII	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
DriI	GACNNNNNGTC	1 cut(s)	1501
EaeI	YGGCCR	1 cut(s)	1508
Eam1104I	CTCTTC	5 cut(s)	113, 251, 300, 669, 1318
Eam1105I	GACNNNNNGTC	1 cut(s)	1501
EarI	CTCTTC	5 cut(s)	113, 251, 300, 669, 1318
Eco130I	CCWWGG	2 cut(s)	85, 966
Eco47I	GGWCC	2 cut(s)	612, 963
Eco81I	CCTNAGG	1 cut(s)	1530
Eco88I	CYCGRG	2 cut(s)	29, 876
EcoRI	GAATTC	1 cut(s)	328
EcoRII	CCWGG	3 cut(s)	945, 986, 1049
EcoT14I	CCWWGG	2 cut(s)	85, 966
ErhI	CCWWGG	2 cut(s)	85, 966
FaeI	CATG	3 cut(s)	251, 292, 1517
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FatI	CATG	3 cut(s)	247, 288, 1513
FbaI	TGATCA	1 cut(s)	1408
Fnu4HI	GCNGC	3 cut(s)	1013, 1166, 1470
FokI	GGATG	3 cut(s)	297, 1271, 1428
Fsp4HI	GCNGC	3 cut(s)	1013, 1166, 1470
FspBI	CTAG	4 cut(s)	156, 651, 1005, 1110
GluI	GCNGC	3 cut(s)	1013, 1166, 1470
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	2 cut(s)	561, 606
HaeIII	GGCC	2 cut(s)	104, 1510
HapII	CCGG	6 cut(s)	30, 411, 430, 490, 550, 655
Hin1II	CATG	3 cut(s)	251, 292, 1517
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HinfI	GANTC	3 cut(s)	680, 971, 1496
HpaI	GTTAAC	1 cut(s)	349
HpaII	CCGG	6 cut(s)	30, 411, 430, 490, 550, 655
HphI	GGTGA	1 cut(s)	1220
Hpy166II	GTNNAC	3 cut(s)	349, 1235, 1385
Hpy188I	TCNGA	3 cut(s)	337, 976, 1172
Hpy8I	GTNNAC	3 cut(s)	349, 1235, 1385
HpyAV	CCTTC	8 cut(s)	37, 94, 145, 495, 555, 900, 1194, 1248
HpyCH4III	ACNGT	4 cut(s)	341, 346, 1448, 1561
HpyCH4IV	ACGT	1 cut(s)	265
HpyCH4V	TGCA	4 cut(s)	399, 714, 774, 834
HpyF10VI	GCNNNNNNNGC	3 cut(s)	101, 360, 1009
HpyF3I	CTNAG	5 cut(s)	96, 393, 1064, 1169, 1530
HpySE526I	ACGT	1 cut(s)	265
Hsp92II	CATG	3 cut(s)	251, 292, 1517
Ksp22I	TGATCA	1 cut(s)	1408
KspAI	GTTAAC	1 cut(s)	349
Kzo9I	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
LguI	GCTCTTC	2 cut(s)	300, 1318
LmnI	GCTCC	4 cut(s)	87, 580, 625, 1246
Lsp1109I	GCAGC	3 cut(s)	999, 1152, 1456
LweI	GCATC	3 cut(s)	319, 1201, 1337
MaeI	CTAG	4 cut(s)	156, 651, 1005, 1110
MaeII	ACGT	1 cut(s)	265
MaeIII	GTNAC	2 cut(s)	690, 1475
MalI	GATC	8 cut(s)	50, 68, 456, 516, 912, 1035, 1095, 1410
MboI	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
MflI	RGATCY	2 cut(s)	48, 1093
MlsI	TGGCCA	1 cut(s)	1510
MluCI	AATT	3 cut(s)	279, 328, 1290
MluNI	TGGCCA	1 cut(s)	1510
MlyI	GAGTC	1 cut(s)	1490
Mox20I	TGGCCA	1 cut(s)	1510
MscI	TGGCCA	1 cut(s)	1510
MseI	TTAA	7 cut(s)	78, 348, 846, 897, 1379, 1425, 1570
Msp20I	TGGCCA	1 cut(s)	1510
MspA1I	CMGCKG	1 cut(s)	1012
MspCI	CTTAAG	2 cut(s)	845, 1424
MspI	CCGG	6 cut(s)	30, 411, 430, 490, 550, 655
MspR9I	CCNGG	8 cut(s)	30, 31, 412, 490, 550, 947, 988, 1051
MvaI	CCWGG	3 cut(s)	947, 988, 1051
MwoI	GCNNNNNNNGC	3 cut(s)	101, 360, 1009
NciI	CCSGG	5 cut(s)	30, 31, 412, 490, 550
NdeII	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
NlaIII	CATG	3 cut(s)	251, 292, 1517
NlaIV	GGNNCC	2 cut(s)	322, 1095
NmuCI	GTSAC	1 cut(s)	1475
NspI	RCATGY	1 cut(s)	1517
PaeR7I	CTCGAG	1 cut(s)	876
PasI	CCCWGGG	2 cut(s)	987, 1050
PciSI	GCTCTTC	2 cut(s)	300, 1318
PfeI	GAWTC	2 cut(s)	680, 971
PflMI	CCANNNNNTGG	1 cut(s)	1448
PkrI	GCNGC	3 cut(s)	1014, 1167, 1471
PleI	GAGTC	1 cut(s)	1490
PpsI	GAGTC	1 cut(s)	1490
Psp6I	CCWGG	3 cut(s)	945, 986, 1049
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	3 cut(s)	945, 986, 1049
PspN4I	GGNNCC	2 cut(s)	322, 1095
PspPI	GGNCC	2 cut(s)	612, 963
PstI	CTGCAG	2 cut(s)	776, 836
PsuI	RGATCY	2 cut(s)	48, 1093
PvuII	CAGCTG	1 cut(s)	1012
RsaI	GTAC	5 cut(s)	295, 343, 1047, 1248, 1563
RsaNI	GTAC	5 cut(s)	294, 342, 1046, 1247, 1562
SapI	GCTCTTC	2 cut(s)	300, 1318
SaqAI	TTAA	7 cut(s)	78, 348, 846, 897, 1379, 1425, 1570
SatI	GCNGC	3 cut(s)	1013, 1166, 1470
Sau3AI	GATC	8 cut(s)	48, 66, 454, 514, 910, 1033, 1093, 1408
Sau96I	GGNCC	2 cut(s)	612, 963
SbfI	CCTGCAGG	2 cut(s)	776, 836
SchI	GAGTC	1 cut(s)	1490
ScrFI	CCNGG	8 cut(s)	30, 31, 412, 490, 550, 947, 988, 1051
SdaI	CCTGCAGG	2 cut(s)	776, 836
SfaNI	GCATC	3 cut(s)	319, 1201, 1337
SfcI	CTRYAG	2 cut(s)	772, 832
Sfr274I	CTCGAG	1 cut(s)	876
SinI	GGWCC	2 cut(s)	612, 963
SlaI	CTCGAG	1 cut(s)	876
SmaI	CCCGGG	1 cut(s)	31
SmlI	CTYRAG	4 cut(s)	845, 876, 1424, 1483
SmoI	CTYRAG	4 cut(s)	845, 876, 1424, 1483
Sse8387I	CCTGCAGG	2 cut(s)	776, 836
Sse9I	AATT	3 cut(s)	279, 328, 1290
SspMI	CTAG	4 cut(s)	156, 651, 1005, 1110
StyD4I	CCNGG	8 cut(s)	28, 29, 410, 488, 548, 945, 986, 1049
StyI	CCWWGG	2 cut(s)	85, 966
TaaI	ACNGT	4 cut(s)	341, 346, 1448, 1561
TaiI	ACGT	1 cut(s)	268
TaqI	TCGA	2 cut(s)	69, 877
TaqII	GACCGA	1 cut(s)	1323
TasI	AATT	3 cut(s)	279, 328, 1290
TatI	WGTACW	1 cut(s)	1246
TfiI	GAWTC	2 cut(s)	680, 971
Tru1I	TTAA	7 cut(s)	78, 348, 846, 897, 1379, 1425, 1570
Tru9I	TTAA	7 cut(s)	78, 348, 846, 897, 1379, 1425, 1570
TscAI	CASTG	3 cut(s)	873, 1107, 1480
TseFI	GTSAC	1 cut(s)	1475
TseI	GCWGC	3 cut(s)	1012, 1165, 1469
Tsp45I	GTSAC	1 cut(s)	1475
TspDTI	ATGAA	1 cut(s)	228
TspGWI	ACGGA	1 cut(s)	317
TspMI	CCCGGG	1 cut(s)	29
TspRI	CASTG	3 cut(s)	873, 1107, 1480
Van91I	CCANNNNNTGG	1 cut(s)	1448
Vha464I	CTTAAG	2 cut(s)	845, 1424
VpaK11BI	GGWCC	2 cut(s)	612, 963
XapI	RAATTY	2 cut(s)	279, 328
XbaI	TCTAGA	1 cut(s)	1109
XceI	RCATGY	1 cut(s)	1517
XhoI	CTCGAG	1 cut(s)	876
XmaI	CCCGGG	1 cut(s)	29
XspI	CTAG	4 cut(s)	156, 651, 1005, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.