Rh2AG171800
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
16310706 .. 16317728
7023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG171800.1

Sequence Viewer

Length: 1557 bp
ATGGTTATAGTAGGGGAGTTTGTAGGGGGTGCTGTTCTTGGAGCAGCCTTTGGGGTGTTGTTTGATGTTGTCAAGAAAGCAGTTGACAAGCCTACTGCCTTTAAATCCCTCCTTGAGAATATCAAGTTTTCTCTGGAGTTTCTAAAGCCTGTGATTGAAAAGATAGGAGAGCATAACGTGGAATTGGGTCTCCCAGATGAAGAAATAAAGCATCTTATAACAGAAATGGAGGAGGGCGTAAAGCTTGTCCAGAAGTCATCAAAAGTCATGGCTCACAATGGGAACAAAATTCCCAAAGCTAGTAGAAGAGCAGGGAGAAATCGAGTTTTGGAGGCATCCAACTTAATAGTCTACCGTTTTGCCGAGTTGGTCAATGCTACTGAGAATTTCAAGTCTAGTGGGGGAGACTTTGTGGGGACTTTCAAGGGTTGGGTGGATGAGAATACGCTTGCACCTTCTAAGGTTGGCACTGGAATGGCCGTTGCTGTCAAGAGATTGAACCCAGAAAGTGTCGAAGACTTTAAACAGTGGCAGCTCTCAGTGAACTTCCTCGGAAGGCTTTCTCATCCCAACCTTGTCAAGCTCTTGGGATACTGTCGTGAGAATAAGGAGTTGCTCTTAGTATATGAGTTCATGCCGAATGGAAGCTTATTTAATCATCTGTCTAGAAGGAACCCTGATGAGGAACCCCTATGTTGGGATAACAGACTCAGAATCGCTATTGGAGCTGCTCGGGTCTTGACTTTGTTGCACATTTTACAAATCATACACAGAGATGTCACACCCTCAAATATATTGCTTGATGAGGATTACAATACAAAAATCATGGATTTTTCCTTGTCAGAATGGGGGCCAGCTGATGGAAAGTTACACGTGTCAACAAAGATTTGTGGCACAATGGGTTATATTGATCCAGACTACTTGAGAACAGGGATCCCTGATGAGGAACCATTATCTTGGGACAACAGACTCAAGATAGCTACTGGAGCTGCTCAGGGCTTAGCTTTCTTGCACAGTTTTCAAATCATAGACAGAGATGTCAAACCCTCTAATATACTGCTTGATGAAAATTACAATCCAAAAATCTCAAGTTTTTACCTGGCAAAATGGTGGCCTGCTGATGGAGAGTTTTATGAGTCAACTCGGATTTGTGGCTCACAGGCTTATGTTGATCCAGAATACATGAGAACAGGTCATTTATCTGTGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTGCTTGAAATTCTGACAGGGTTAACGTCCAACGACTTTAGCAGCCCTGAAGGACAGATTGCTCTGGTTGACTGGGCTATACCACTCCTATCTGATGAAACAAAGTTGCAAACCATCATGGATACGCGGACAGATGGTCAGTATTCCTCCCAGGAAGCATTACAGACAGCACAGCTTACTCTAAAATGTCTAGAAAGAGATCCGGAAAGCCGACCTTCCATGAAAGAAGTTGTGGAGGAATTGGCGTGCATTCAGGCAATGAAGGAAAACCCGAACCAGTCCGAGCTTAAACCTACGCCCTCTCCTTCTAGTTCTCAATGA

Protein Analysis

518

Amino Acids

57.85

Weight (kDa)

5.29

Isoelectric Point (pI)

34.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 96 2.1e-18 Arabidopsis broad-spectrum mildew resistance protein RPW8
PK_Tyr_Ser-Thr PF07714 143 - 288 2.5e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 156 - 309 8e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 308 - 493 1.6e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 321 - 491 9.7e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AasI GACNNNNNNGTC 1 cut(s) 1037
AccB7I CCANNNNNTGG 1 cut(s) 860
AccI GTMKAC 1 cut(s) 351
AccII CGCG 1 cut(s) 1363
AccIII TCCGGA 1 cut(s) 1438
AciI CCGC 1 cut(s) 1363
AclWI GGATC 5 cut(s) 905, 928, 941, 1166, 1430
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 3 cut(s) 288, 385, 1245
AcuI CTGAAG 1 cut(s) 1305
AcvI CACGTG 1 cut(s) 874
AfaI GTAC 1 cut(s) 1220
AfiI CCNNNNNNNGG 6 cut(s) 682, 696, 697, 860, 943, 1121
AflIII ACRYGT 3 cut(s) 871, 873, 1215
AgsI TTSAA 6 cut(s) 158, 391, 424, 499, 1022, 1244
AhdI GACNNNNNGTC 1 cut(s) 1371
AjiI CACGTC 1 cut(s) 1216
AjnI CCWGG 2 cut(s) 1098, 1386
Alw26I GTCTC 2 cut(s) 194, 399
AlwI GGATC 5 cut(s) 905, 928, 941, 1166, 1430
Ama87I CYCGRG 1 cut(s) 732
Aor13HI TCCGGA 1 cut(s) 1438
AoxI GGCC 3 cut(s) 477, 851, 1112
ApeKI GCWGC 6 cut(s) 44, 532, 728, 989, 1237, 1278
ApoI RAATTY 3 cut(s) 288, 385, 1245
Asp700I GAANNNNTTC 1 cut(s) 559
AspS9I GGNCC 1 cut(s) 851
AvaI CYCGRG 1 cut(s) 732
BaeI ACNNNNGTAYC 2 cut(s) 583, 616
BamHI GGATCC 1 cut(s) 933
BbrPI CACGTG 1 cut(s) 874
BbsI GAAGAC 1 cut(s) 522
BbvI GCAGC 6 cut(s) 56, 544, 715, 976, 1224, 1290
BccI CCATC 4 cut(s) 854, 1115, 1358, 1364
BceAI ACGGC 1 cut(s) 464
BciT130I CCWGG 2 cut(s) 1100, 1388
BciVI GTATCC 2 cut(s) 584, 1351
BcoDI GTCTC 2 cut(s) 194, 399
BfaI CTAG 5 cut(s) 300, 396, 666, 1427, 1545
BfuI GTATCC 2 cut(s) 584, 1351
BisI GCNGC 6 cut(s) 45, 533, 729, 990, 1238, 1279
BlpI GCTNAGC 1 cut(s) 1000
BlsI GCNGC 6 cut(s) 46, 534, 730, 991, 1239, 1280
Bme1390I CCNGG 2 cut(s) 1100, 1388
BmeRI GACNNNNNGTC 1 cut(s) 1371
BmeT110I CYCGRG 1 cut(s) 732
BmgBI CACGTC 1 cut(s) 1216
BmgT120I GGNCC 1 cut(s) 851
BmiI GGNNCC 5 cut(s) 674, 687, 852, 935, 948
BmrFI CCNGG 2 cut(s) 1100, 1388
BmrI ACTGGG 1 cut(s) 1318
BmsI GCATC 2 cut(s) 220, 344
BmuI ACTGGG 1 cut(s) 1318
BpiI GAAGAC 1 cut(s) 522
BpmI CTGGAG 2 cut(s) 155, 1005
Bpu10I CCTNAGC 1 cut(s) 993
Bpu1102I GCTNAGC 1 cut(s) 1000
BpuEI CTTGAG 4 cut(s) 134, 943, 956, 1072
BsaAI YACGTR 1 cut(s) 874
BsaI GGTCTC 1 cut(s) 194
BsaJI CCNNGG 2 cut(s) 550, 1386
BsaWI WCCGGW 1 cut(s) 1438
BsaXI ACNNNNNCTCC 4 cut(s) 396, 426, 1522, 1552
Bsc4I CCNNNNNNNGG 6 cut(s) 682, 696, 697, 860, 943, 1121
Bse1I ACTGG 4 cut(s) 475, 988, 1313, 1513
Bse3DI GCAATG 1 cut(s) 1500
BseAI TCCGGA 1 cut(s) 1438
BseBI CCWGG 2 cut(s) 1100, 1388
BseDI CCNNGG 2 cut(s) 550, 1386
BseGI GGATG 3 cut(s) 335, 442, 565
BseLI CCNNNNNNNGG 6 cut(s) 682, 696, 697, 860, 943, 1121
BseMI GCAATG 1 cut(s) 1500
BseMII CTCAG 4 cut(s) 372, 552, 724, 1007
BseNI ACTGG 4 cut(s) 475, 988, 1313, 1513
BseRI GAGGAG 1 cut(s) 245
BseXI GCAGC 6 cut(s) 56, 544, 715, 976, 1224, 1290
Bsh1236I CGCG 1 cut(s) 1363
BshFI GGCC 3 cut(s) 479, 853, 1114
BsiHKCI CYCGRG 1 cut(s) 732
BsiSI CCGG 1 cut(s) 1439
BslFI GGGAC 2 cut(s) 430, 974
BslI CCNNNNNNNGG 6 cut(s) 682, 696, 697, 860, 943, 1121
BsmAI GTCTC 2 cut(s) 194, 399
BsmFI GGGAC 2 cut(s) 430, 974
BsmI GAATGC 1 cut(s) 1485
BsnI GGCC 3 cut(s) 479, 853, 1114
Bso31I GGTCTC 1 cut(s) 194
BsoBI CYCGRG 1 cut(s) 732
Bsp13I TCCGGA 1 cut(s) 1438
Bsp1407I TGTACA 1 cut(s) 1218
Bsp143I GATC 4 cut(s) 910, 933, 1171, 1435
Bsp1720I GCTNAGC 1 cut(s) 1000
BspACI CCGC 1 cut(s) 1363
BspANI GGCC 3 cut(s) 479, 853, 1114
BspCNI CTCAG 4 cut(s) 373, 551, 723, 1006
BspEI TCCGGA 1 cut(s) 1438
BspFNI CGCG 1 cut(s) 1363
BspLI GGNNCC 5 cut(s) 674, 687, 852, 935, 948
BspPI GGATC 5 cut(s) 905, 928, 941, 1166, 1430
BspQI GCTCTTC 2 cut(s) 301, 1202
BspTNI GGTCTC 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 1500
BsrGI TGTACA 1 cut(s) 1218
BsrI ACTGG 4 cut(s) 475, 988, 1313, 1513
BssECI CCNNGG 2 cut(s) 550, 1386
BssMI GATC 4 cut(s) 910, 933, 1171, 1435
Bst2UI CCWGG 2 cut(s) 1100, 1388
Bst4CI ACNGT 4 cut(s) 356, 528, 596, 1016
Bst6I CTCTTC 2 cut(s) 301, 1202
BstAUI TGTACA 1 cut(s) 1218
BstBAI YACGTR 1 cut(s) 874
BstC8I GCNNGC 4 cut(s) 450, 855, 1116, 1483
BstDEI CTNAG 7 cut(s) 381, 459, 538, 619, 710, 993, 1000
BstF5I GGATG 3 cut(s) 335, 442, 565
BstFNI CGCG 1 cut(s) 1363
BstKTI GATC 4 cut(s) 913, 936, 1174, 1438
BstMAI GTCTC 2 cut(s) 194, 399
BstMBI GATC 4 cut(s) 910, 933, 1171, 1435
BstMWI GCNNNNNNNGC 2 cut(s) 725, 986
BstNI CCWGG 2 cut(s) 1100, 1388
BstSCI CCNGG 2 cut(s) 1098, 1386
BstUI CGCG 1 cut(s) 1363
BstV1I GCAGC 6 cut(s) 56, 544, 715, 976, 1224, 1290
BstV2I GAAGAC 1 cut(s) 522
BstX2I RGATCY 2 cut(s) 933, 1435
BstXI CCANNNNNNTGG 1 cut(s) 957
BstYI RGATCY 2 cut(s) 933, 1435
BsuI GTATCC 2 cut(s) 584, 1351
BsuRI GGCC 3 cut(s) 479, 853, 1114
BtrI CACGTC 1 cut(s) 1216
BtsCI GGATG 3 cut(s) 335, 442, 565
BtsIMutI CAGTG 3 cut(s) 468, 533, 546
Cac8I GCNNGC 4 cut(s) 450, 855, 1116, 1483
Cfr13I GGNCC 1 cut(s) 851
Csp6I GTAC 1 cut(s) 1219
CspCI CAANNNNNGTGG 2 cut(s) 379, 414
CviAII CATG 6 cut(s) 268, 634, 826, 1183, 1354, 1456
CviQI GTAC 1 cut(s) 1219
DdeI CTNAG 7 cut(s) 381, 459, 538, 619, 710, 993, 1000
DpnI GATC 4 cut(s) 912, 935, 1173, 1437
DpnII GATC 4 cut(s) 910, 933, 1171, 1435
DraI TTTAAA 2 cut(s) 103, 523
DrdI GACNNNNNNGTC 1 cut(s) 1037
DriI GACNNNNNGTC 1 cut(s) 1371
DseDI GACNNNNNNGTC 1 cut(s) 1037
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 2 cut(s) 301, 1202
Eam1105I GACNNNNNGTC 1 cut(s) 1371
EarI CTCTTC 2 cut(s) 301, 1202
Eco31I GGTCTC 1 cut(s) 194
Eco57I CTGAAG 1 cut(s) 1305
Eco72I CACGTG 1 cut(s) 874
Eco88I CYCGRG 1 cut(s) 732
EcoRII CCWGG 2 cut(s) 1098, 1386
FaeI CATG 6 cut(s) 271, 637, 829, 1186, 1357, 1459
FalI AAGNNNNNCTT 2 cut(s) 1435, 1467
FaqI GGGAC 2 cut(s) 430, 974
FatI CATG 6 cut(s) 267, 633, 825, 1182, 1353, 1455
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 6 cut(s) 45, 533, 729, 990, 1238, 1279
FokI GGATG 3 cut(s) 322, 449, 552
Fsp4HI GCNGC 6 cut(s) 45, 533, 729, 990, 1238, 1279
FspBI CTAG 5 cut(s) 300, 396, 666, 1427, 1545
GluI GCNGC 6 cut(s) 45, 533, 729, 990, 1238, 1279
GsuI CTGGAG 2 cut(s) 155, 1005
HaeIII GGCC 3 cut(s) 479, 853, 1114
HapII CCGG 1 cut(s) 1439
Hin1II CATG 6 cut(s) 271, 637, 829, 1186, 1357, 1459
HincII GTYRAC 5 cut(s) 85, 879, 1140, 1260, 1306
HindII GTYRAC 5 cut(s) 85, 879, 1140, 1260, 1306
HindIII AAGCTT 2 cut(s) 242, 646
HinfI GANTC 4 cut(s) 708, 714, 969, 1136
HpaI GTTAAC 1 cut(s) 1260
HpaII CCGG 1 cut(s) 1439
Hpy166II GTNNAC 8 cut(s) 85, 352, 544, 879, 1140, 1219, 1260, 1306
Hpy188I TCNGA 7 cut(s) 554, 713, 844, 1146, 1251, 1330, 1519
Hpy8I GTNNAC 8 cut(s) 85, 352, 544, 879, 1140, 1219, 1260, 1306
Hpy99I CGWCG 1 cut(s) 1217
HpyAV CCTTC 7 cut(s) 465, 549, 663, 1280, 1461, 1492, 1551
HpyCH4III ACNGT 4 cut(s) 356, 528, 596, 1016
HpyCH4IV ACGT 4 cut(s) 177, 873, 1215, 1262
HpyCH4V TGCA 5 cut(s) 452, 751, 1012, 1345, 1485
HpyF10VI GCNNNNNNNGC 2 cut(s) 725, 986
HpyF3I CTNAG 7 cut(s) 381, 459, 538, 619, 710, 993, 1000
HpySE526I ACGT 4 cut(s) 177, 873, 1215, 1262
Hsp92II CATG 6 cut(s) 271, 637, 829, 1186, 1357, 1459
Kpn2I TCCGGA 1 cut(s) 1438
KspAI GTTAAC 1 cut(s) 1260
Kzo9I GATC 4 cut(s) 910, 933, 1171, 1435
LguI GCTCTTC 2 cut(s) 301, 1202
LmnI GCTCC 3 cut(s) 41, 725, 986
Lsp1109I GCAGC 6 cut(s) 56, 544, 715, 976, 1224, 1290
LweI GCATC 2 cut(s) 220, 344
MaeI CTAG 5 cut(s) 300, 396, 666, 1427, 1545
MaeII ACGT 4 cut(s) 177, 873, 1215, 1262
MaeIII GTNAC 2 cut(s) 778, 867
MalI GATC 4 cut(s) 912, 935, 1173, 1437
MboI GATC 4 cut(s) 910, 933, 1171, 1435
MboII GAAGA 4 cut(s) 212, 318, 527, 1219
MflI RGATCY 2 cut(s) 933, 1435
MluCI AATT 6 cut(s) 182, 288, 385, 1069, 1245, 1475
MlyI GAGTC 3 cut(s) 702, 963, 1145
MmeI TCCRAC 2 cut(s) 363, 1290
MroI TCCGGA 1 cut(s) 1438
MroXI GAANNNNTTC 1 cut(s) 559
MseI TTAA 6 cut(s) 102, 344, 522, 654, 1259, 1524
MslI CAYNNNNRTG 2 cut(s) 473, 774
MspA1I CMGCKG 1 cut(s) 857
MspI CCGG 1 cut(s) 1439
MspR9I CCNGG 2 cut(s) 1100, 1388
Mva1269I GAATGC 1 cut(s) 1485
MvaI CCWGG 2 cut(s) 1100, 1388
MvnI CGCG 1 cut(s) 1363
MwoI GCNNNNNNNGC 2 cut(s) 725, 986
NdeII GATC 4 cut(s) 910, 933, 1171, 1435
NlaIII CATG 6 cut(s) 271, 637, 829, 1186, 1357, 1459
NlaIV GGNNCC 5 cut(s) 674, 687, 852, 935, 948
NmeAIII GCCGAG 1 cut(s) 388
NmuCI GTSAC 1 cut(s) 778
PciSI GCTCTTC 2 cut(s) 301, 1202
PctI GAATGC 1 cut(s) 1485
PdmI GAANNNNTTC 1 cut(s) 559
PfeI GAWTC 1 cut(s) 714
PflMI CCANNNNNTGG 1 cut(s) 860
PkrI GCNGC 6 cut(s) 46, 534, 730, 991, 1239, 1280
PleI GAGTC 3 cut(s) 702, 963, 1144
PmaCI CACGTG 1 cut(s) 874
PmlI CACGTG 1 cut(s) 874
PpsI GAGTC 3 cut(s) 702, 963, 1144
Ppu21I YACGTR 1 cut(s) 874
PsiI TTATAA 1 cut(s) 218
Psp6I CCWGG 2 cut(s) 1098, 1386
PspCI CACGTG 1 cut(s) 874
PspGI CCWGG 2 cut(s) 1098, 1386
PspN4I GGNNCC 5 cut(s) 674, 687, 852, 935, 948
PspPI GGNCC 1 cut(s) 851
PsuI RGATCY 2 cut(s) 933, 1435
PvuII CAGCTG 1 cut(s) 857
RsaI GTAC 1 cut(s) 1220
RsaNI GTAC 1 cut(s) 1219
RseI CAYNNNNRTG 2 cut(s) 473, 774
SapI GCTCTTC 2 cut(s) 301, 1202
SaqAI TTAA 6 cut(s) 102, 344, 522, 654, 1259, 1524
SatI GCNGC 6 cut(s) 45, 533, 729, 990, 1238, 1279
Sau3AI GATC 4 cut(s) 910, 933, 1171, 1435
Sau96I GGNCC 1 cut(s) 851
SchI GAGTC 3 cut(s) 702, 963, 1145
ScrFI CCNGG 2 cut(s) 1100, 1388
SfaNI GCATC 2 cut(s) 220, 344
SmiMI CAYNNNNRTG 2 cut(s) 473, 774
SmlI CTYRAG 4 cut(s) 113, 922, 971, 1087
SmoI CTYRAG 4 cut(s) 113, 922, 971, 1087
Sse9I AATT 6 cut(s) 182, 288, 385, 1069, 1245, 1475
SsiI CCGC 1 cut(s) 1363
SspMI CTAG 5 cut(s) 300, 396, 666, 1427, 1545
StyD4I CCNGG 2 cut(s) 1098, 1386
TaaI ACNGT 4 cut(s) 356, 528, 596, 1016
TaiI ACGT 4 cut(s) 180, 876, 1218, 1265
TaqI TCGA 2 cut(s) 322, 513
TasI AATT 6 cut(s) 182, 288, 385, 1069, 1245, 1475
TatI WGTACW 1 cut(s) 1218
TfiI GAWTC 1 cut(s) 714
Tru1I TTAA 6 cut(s) 102, 344, 522, 654, 1259, 1524
Tru9I TTAA 6 cut(s) 102, 344, 522, 654, 1259, 1524
TscAI CASTG 3 cut(s) 475, 533, 546
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 6 cut(s) 44, 532, 728, 989, 1237, 1278
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 6 cut(s) 213, 622, 1080, 1347, 1472, 1511
TspRI CASTG 3 cut(s) 475, 533, 546
Van91I CCANNNNNTGG 1 cut(s) 860
XapI RAATTY 3 cut(s) 288, 385, 1245
XbaI TCTAGA 2 cut(s) 665, 1426
XmiI GTMKAC 1 cut(s) 351
XmnI GAANNNNTTC 1 cut(s) 559
XspI CTAG 5 cut(s) 300, 396, 666, 1427, 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.