Rh2BG179100
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
15898937 .. 15901868
2932 bp
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UTR
Exon/CDS
Intron
Rh2BG179100.1

Sequence Viewer

Length: 1722 bp
ATGAGGGCAGGGGCACTTGAATATGCTGGGTTTGTGAGGAAAGTGAGGACTCCTTCGATCTTGATCTTTACTCTTTCTTCATCCAAAGCAAAAGCCCCCATCAACCTCTTGGAGAAGTCAAGCTCTGTGCCCTGCCTCCAACAAATATATTACTTCTCTCCTTGCTCTTCATCAAAGCTTACATTGAAACGAACACAGTTTTCTCATTTGGGTTATGGACTTTGTCGTAATAATGAAGAATCAGTAATGGTTATAGTAGGGGAGTTTGTAGGGGGTGCAGCTCTTGGTGCAGCATTTGGGCTGTTGTTTGATGTTGTGAAGAAAGCAGTTGACAAGCCTAGTACCTTTAGATCCCTCTTTGAGAACATTAAATTTTCGCTTAAGTTTTTAAAACCAATGATCGAAAAGATAGGAGAACATAACGTGGAATTGGGTCTCCCAGATGAAGAAATAAAGTATATTATAAGAGAAATGGAGGAGGGCGTAAAGCTTGTCCAGAAGTCATCAAAGATCAGTAAGTGGAACTGCATGAAGTTTTATTACACGGATCAACTTATTGAACTAGATGGGTCTCTTAAAAGACTGTTAGATATATTGATAGTGCAAGGATTAAGAGATGGGAAGGAGACCTTGATTTTGGCAACAAAACACCAAGACCAACTTATTGAATCGGCAAGAGATGCAAAGGAGACCATGGTTTTGGCACAAAAGAACAATGACCAGCTTATTGAATCAGCAAAGGATGGGAAAGAGACCTTAGTTCTGGCAAGACAAAATGCGGACCAACTTATTGATTCGTCAAGAGATGGGAAGGAGACCTTGGATTTGGCAAGACAAAACAATGCCCAGCTTATTGAATCAGCAAGGGATGGAACGGAGACCCTGGTTTTGGCCAAGAACATTAAAAGGTTTCTCAAACGAATTGAATGTTTGGTGCGTTGTACTTATAAAGGAAATTCCAGATATCACAGTGGGAGCAGAGTTTCAAAAGCAAGCAGAAGCTCAGGAAGAGGTCGAATTTTGGAGACATCCAACTTAAGAGTTTACCGTTTTGCCGAGTTGAAGGATGCTACTCAGAATTTCTGGCAAGGTGAGTTTGGTTGTGGAGGTTTTGGGAGTATGTACAAGGGTTGGATGGATGAAAAGACGCTTGCACCTTCTAAGGTTGGCACTGGAATGGCCGTTGCTGTCAAGACATTTTACTCAGAAAGTATCGAAAGCATTAAACAGTGGCAGGATTACAATACAAAACTGTCAGATTTTTCCTTGGCAAAATGGGGGTCAGCTGATGGAGAGTTAGATGTGTCTACAGGGGTTTGTGGCACAATAGGATATATCGATCCAGAATACCTGAGAACAGGTCATGTGTGTGTGAAGGGCGATGTGTATAGCTTCGGTGTTTTGCTGCTTGAGATTCTGACAGGATTAAAGTCCTTCGATTTAAGCCGATCTGAGGAAGAATTTAGTCTGGCTAGGTGGGCTATACCACTTTTGTGTGATGAAACAAAGTTGCAAACCATCATGGATGAGCAGATTAAGGGCCAATATTCCTCCCAGGAAGCATTGCAGAGTGCACAGCTTGCTCTAAAATGTTTAGAAACAGATCCTGAAAGCGGACCTTCCATGAAAGAAGTTGTGGAGCAATTGGAAAACATTCAGGCATTGAAGGGAAAACCAGACCAGTCCGAGCTTACTACTATGCAGTATTCTTCTAATTCTTAA

Protein Analysis

573

Amino Acids

63.98

Weight (kDa)

7.45

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 88 - 216 2.9e-26 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 413 - 547 2e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 414 - 549 5.6e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 464, 948
AccI GTMKAC 1 cut(s) 1307
AciI CCGC 2 cut(s) 779, 1614
AclWI GGATC 4 cut(s) 345, 555, 1334, 1598
AcoI YGGCCR 2 cut(s) 891, 1179
AcsI RAATTY 5 cut(s) 371, 955, 1017, 1078, 1460
AfaI GTAC 3 cut(s) 343, 943, 1124
AfiI CCNNNNNNNGG 3 cut(s) 889, 1453, 1613
AflII CTTAAG 2 cut(s) 380, 1036
AjnI CCWGG 2 cut(s) 882, 1554
AjuI GAANNNNNNNTTGG 2 cut(s) 803, 835
AleI CACNNNNGTG 1 cut(s) 1492
Alw21I GWGCWC 1 cut(s) 1576
Alw26I GTCTC 8 cut(s) 440, 576, 620, 683, 746, 809, 872, 1019
Alw44I GTGCAC 1 cut(s) 1572
AlwI GGATC 4 cut(s) 345, 555, 1334, 1598
AlwNI CAGNNNCTG 1 cut(s) 1607
AoxI GGCC 3 cut(s) 891, 1179, 1540
ApaLI GTGCAC 1 cut(s) 1572
ApeKI GCWGC 3 cut(s) 278, 290, 1405
ApoI RAATTY 5 cut(s) 371, 955, 1017, 1078, 1460
Asp700I GAANNNNTTC 1 cut(s) 1653
AspS9I GGNCC 3 cut(s) 781, 1540, 1616
AsuHPI GGTGA 1 cut(s) 1103
AvaII GGWCC 2 cut(s) 781, 1616
BaeGI GKGCMC 3 cut(s) 16, 132, 1576
BalI TGGCCA 1 cut(s) 893
BarI GAAGNNNNNNTAC 2 cut(s) 524, 556
Bbv12I GWGCWC 1 cut(s) 1576
BbvI GCAGC 3 cut(s) 290, 302, 1392
BccI CCATC 9 cut(s) 107, 560, 611, 737, 800, 863, 1129, 1283, 1526
BceAI ACGGC 1 cut(s) 1166
BciT130I CCWGG 2 cut(s) 884, 1556
BcoDI GTCTC 8 cut(s) 440, 576, 620, 683, 746, 809, 872, 1019
BfaI CTAG 3 cut(s) 339, 563, 1473
BfmI CTRYAG 1 cut(s) 1308
BfrI CTTAAG 2 cut(s) 380, 1036
BisI GCNGC 3 cut(s) 279, 291, 1406
BlsI GCNGC 3 cut(s) 280, 292, 1407
Bme1390I CCNGG 2 cut(s) 884, 1556
Bme18I GGWCC 2 cut(s) 781, 1616
BmgT120I GGNCC 3 cut(s) 781, 1540, 1616
BmrFI CCNGG 2 cut(s) 884, 1556
BmsI GCATC 2 cut(s) 670, 1057
Bpu10I CCTNAGC 1 cut(s) 1003
BpuEI CTTGAG 1 cut(s) 1430
Bsa29I ATCGAT 1 cut(s) 1338
BsaBI GATNNNNATC 1 cut(s) 62
BsaI GGTCTC 7 cut(s) 440, 576, 620, 683, 746, 809, 872
BsaJI CCNNGG 5 cut(s) 693, 819, 882, 1266, 1554
Bsc4I CCNNNNNNNGG 3 cut(s) 889, 1453, 1613
Bse1I ACTGG 2 cut(s) 1177, 1681
Bse3DI GCAATG 1 cut(s) 1562
Bse8I GATNNNNATC 1 cut(s) 62
BseBI CCWGG 2 cut(s) 884, 1556
BseCI ATCGAT 1 cut(s) 1338
BseDI CCNNGG 5 cut(s) 693, 819, 882, 1266, 1554
BseGI GGATG 8 cut(s) 80, 748, 874, 1028, 1072, 1140, 1144, 1531
BseJI GATNNNNATC 1 cut(s) 62
BseLI CCNNNNNNNGG 3 cut(s) 889, 1453, 1613
BseMI GCAATG 1 cut(s) 1562
BseMII CTCAG 5 cut(s) 1017, 1088, 1218, 1343, 1443
BseNI ACTGG 2 cut(s) 1177, 1681
BseRI GAGGAG 1 cut(s) 491
BseSI GKGCMC 3 cut(s) 16, 132, 1576
BseXI GCAGC 3 cut(s) 290, 302, 1392
BseYI CCCAGC 2 cut(s) 26, 846
BsgI GTGCAG 2 cut(s) 297, 309
BshFI GGCC 3 cut(s) 893, 1181, 1542
BshVI ATCGAT 1 cut(s) 1338
BsiHKAI GWGCWC 1 cut(s) 1576
BslI CCNNNNNNNGG 3 cut(s) 889, 1453, 1613
BsmAI GTCTC 8 cut(s) 440, 576, 620, 683, 746, 809, 872, 1019
BsnI GGCC 3 cut(s) 893, 1181, 1542
Bso31I GGTCTC 7 cut(s) 440, 576, 620, 683, 746, 809, 872
Bsp1286I GDGCHC 3 cut(s) 16, 132, 1576
Bsp1407I TGTACA 1 cut(s) 1122
Bsp143I GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 2 cut(s) 779, 1614
BspANI GGCC 3 cut(s) 893, 1181, 1542
BspCNI CTCAG 5 cut(s) 1016, 1087, 1217, 1344, 1444
BspDI ATCGAT 1 cut(s) 1338
BspPI GGATC 4 cut(s) 345, 555, 1334, 1598
BspQI GCTCTTC 1 cut(s) 172
BspTI CTTAAG 2 cut(s) 380, 1036
BspTNI GGTCTC 7 cut(s) 440, 576, 620, 683, 746, 809, 872
BsrDI GCAATG 1 cut(s) 1562
BsrGI TGTACA 1 cut(s) 1122
BsrI ACTGG 2 cut(s) 1177, 1681
BssECI CCNNGG 5 cut(s) 693, 819, 882, 1266, 1554
BssMI GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
BssT1I CCWWGG 3 cut(s) 693, 819, 1266
Bst2UI CCWGG 2 cut(s) 884, 1556
Bst4CI ACNGT 6 cut(s) 198, 585, 971, 1049, 1230, 1254
Bst6I CTCTTC 2 cut(s) 172, 1003
BstAFI CTTAAG 2 cut(s) 380, 1036
BstAPI GCANNNNNTGC 2 cut(s) 680, 1580
BstAUI TGTACA 1 cut(s) 1122
BstC8I GCNNGC 3 cut(s) 994, 1152, 1581
BstDEI CTNAG 7 cut(s) 757, 1003, 1074, 1161, 1204, 1352, 1452
BstDSI CCRYGG 1 cut(s) 693
BstF5I GGATG 8 cut(s) 80, 748, 874, 1028, 1072, 1140, 1144, 1531
BstKTI GATC 9 cut(s) 60, 66, 353, 402, 513, 550, 1342, 1451, 1606
BstMAI GTCTC 8 cut(s) 440, 576, 620, 683, 746, 809, 872, 1019
BstMBI GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
BstMWI GCNNNNNNNGC 4 cut(s) 287, 680, 1478, 1580
BstNI CCWGG 2 cut(s) 884, 1556
BstSCI CCNGG 2 cut(s) 882, 1554
BstSFI CTRYAG 1 cut(s) 1308
BstSLI GKGCMC 3 cut(s) 16, 132, 1576
BstV1I GCAGC 3 cut(s) 290, 302, 1392
BstX2I RGATCY 2 cut(s) 350, 1603
BstXI CCANNNNNNTGG 1 cut(s) 700
BstYI RGATCY 2 cut(s) 350, 1603
Bsu15I ATCGAT 1 cut(s) 1338
BsuRI GGCC 3 cut(s) 893, 1181, 1542
BsuTUI ATCGAT 1 cut(s) 1338
BtgI CCRYGG 1 cut(s) 693
BtgZI GCGATG 1 cut(s) 1395
BtsCI GGATG 8 cut(s) 80, 748, 874, 1028, 1072, 1140, 1144, 1531
BtsIMutI CAGTG 3 cut(s) 976, 1170, 1235
Cac8I GCNNGC 3 cut(s) 994, 1152, 1581
CaiI CAGNNNCTG 1 cut(s) 1607
Cfr13I GGNCC 3 cut(s) 781, 1540, 1616
ClaI ATCGAT 1 cut(s) 1338
CseI GACGC 1 cut(s) 1156
Csp6I GTAC 3 cut(s) 342, 942, 1123
CviAII CATG 5 cut(s) 529, 694, 1364, 1522, 1624
CviQI GTAC 3 cut(s) 342, 942, 1123
DdeI CTNAG 7 cut(s) 757, 1003, 1074, 1161, 1204, 1352, 1452
DpnI GATC 9 cut(s) 59, 65, 352, 401, 512, 549, 1341, 1450, 1605
DpnII GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
DraI TTTAAA 1 cut(s) 390
EaeI YGGCCR 2 cut(s) 891, 1179
Eam1104I CTCTTC 2 cut(s) 172, 1003
EarI CTCTTC 2 cut(s) 172, 1003
Eco130I CCWWGG 3 cut(s) 693, 819, 1266
Eco31I GGTCTC 7 cut(s) 440, 576, 620, 683, 746, 809, 872
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 2 cut(s) 781, 1616
EcoRII CCWGG 2 cut(s) 882, 1554
EcoRV GATATC 1 cut(s) 965
EcoT14I CCWWGG 3 cut(s) 693, 819, 1266
ErhI CCWWGG 3 cut(s) 693, 819, 1266
FaeI CATG 5 cut(s) 532, 697, 1367, 1525, 1627
FalI AAGNNNNNCTT 8 cut(s) 614, 646, 645, 677, 803, 835, 1603, 1635
FatI CATG 5 cut(s) 528, 693, 1363, 1521, 1623
FblI GTMKAC 1 cut(s) 1307
Fnu4HI GCNGC 3 cut(s) 279, 291, 1406
FokI GGATG 8 cut(s) 67, 755, 881, 1015, 1079, 1147, 1151, 1538
Fsp4HI GCNGC 3 cut(s) 279, 291, 1406
FspBI CTAG 3 cut(s) 339, 563, 1473
GluI GCNGC 3 cut(s) 279, 291, 1406
GsaI CCCAGC 2 cut(s) 30, 850
HaeIII GGCC 3 cut(s) 893, 1181, 1542
HgaI GACGC 1 cut(s) 1156
Hin1II CATG 5 cut(s) 532, 697, 1367, 1525, 1627
HincII GTYRAC 1 cut(s) 331
HindII GTYRAC 1 cut(s) 331
HindIII AAGCTT 2 cut(s) 176, 488
HinfI GANTC 7 cut(s) 49, 239, 668, 731, 794, 857, 1414
HphI GGTGA 1 cut(s) 1103
Hpy166II GTNNAC 4 cut(s) 331, 1045, 1308, 1574
Hpy188I TCNGA 6 cut(s) 1077, 1207, 1258, 1419, 1453, 1687
Hpy188III TCNNGA 8 cut(s) 61, 496, 801, 960, 1005, 1192, 1343, 1607
Hpy8I GTNNAC 4 cut(s) 331, 1045, 1308, 1574
HpyAV CCTTC 9 cut(s) 63, 616, 805, 1057, 1167, 1369, 1444, 1629, 1660
HpyCH4III ACNGT 6 cut(s) 198, 585, 971, 1049, 1230, 1254
HpyCH4IV ACGT 1 cut(s) 423
HpyF10VI GCNNNNNNNGC 4 cut(s) 287, 680, 1478, 1580
HpyF3I CTNAG 7 cut(s) 757, 1003, 1074, 1161, 1204, 1352, 1452
HpySE526I ACGT 1 cut(s) 423
Hsp92II CATG 5 cut(s) 532, 697, 1367, 1525, 1627
Kzo9I GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
LguI GCTCTTC 1 cut(s) 172
LmnI GCTCC 2 cut(s) 975, 1639
Lsp1109I GCAGC 3 cut(s) 290, 302, 1392
LweI GCATC 2 cut(s) 670, 1057
MaeI CTAG 3 cut(s) 339, 563, 1473
MaeII ACGT 1 cut(s) 423
MalI GATC 9 cut(s) 59, 65, 352, 401, 512, 549, 1341, 1450, 1605
MboI GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
MboII GAAGA 8 cut(s) 69, 159, 248, 331, 458, 1020, 1469, 1701
MfeI CAATTG 1 cut(s) 1643
MflI RGATCY 2 cut(s) 350, 1603
MhlI GDGCHC 3 cut(s) 16, 132, 1576
MlsI TGGCCA 1 cut(s) 893
MluCI AATT 9 cut(s) 371, 428, 921, 955, 1017, 1078, 1460, 1643, 1714
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 1 cut(s) 43
MmeI TCCRAC 3 cut(s) 163, 1056, 1112
Mox20I TGGCCA 1 cut(s) 893
MroXI GAANNNNTTC 1 cut(s) 1653
MscI TGGCCA 1 cut(s) 893
MslI CAYNNNNRTG 3 cut(s) 1175, 1368, 1492
Msp20I TGGCCA 1 cut(s) 893
MspA1I CMGCKG 1 cut(s) 1286
MspCI CTTAAG 2 cut(s) 380, 1036
MspR9I CCNGG 2 cut(s) 884, 1556
MunI CAATTG 1 cut(s) 1643
MvaI CCWGG 2 cut(s) 884, 1556
MwoI GCNNNNNNNGC 4 cut(s) 287, 680, 1478, 1580
NcoI CCATGG 1 cut(s) 693
NdeII GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
NlaIII CATG 5 cut(s) 532, 697, 1367, 1525, 1627
NmeAIII GCCGAG 1 cut(s) 1081
OliI CACNNNNGTG 1 cut(s) 1492
PciSI GCTCTTC 1 cut(s) 172
PdmI GAANNNNTTC 1 cut(s) 1653
PfeI GAWTC 6 cut(s) 239, 668, 731, 794, 857, 1414
PflFI GACNNNGTC 1 cut(s) 222
PkrI GCNGC 3 cut(s) 280, 292, 1407
PleI GAGTC 1 cut(s) 43
PpsI GAGTC 1 cut(s) 43
PsiI TTATAA 2 cut(s) 464, 948
Psp6I CCWGG 2 cut(s) 882, 1554
PspFI CCCAGC 2 cut(s) 26, 846
PspGI CCWGG 2 cut(s) 882, 1554
PspPI GGNCC 3 cut(s) 781, 1540, 1616
PstNI CAGNNNCTG 1 cut(s) 1607
PsuI RGATCY 2 cut(s) 350, 1603
PsyI GACNNNGTC 1 cut(s) 222
PvuII CAGCTG 1 cut(s) 1286
RsaI GTAC 3 cut(s) 343, 943, 1124
RsaNI GTAC 3 cut(s) 342, 942, 1123
RseI CAYNNNNRTG 3 cut(s) 1175, 1368, 1492
SapI GCTCTTC 1 cut(s) 172
SatI GCNGC 3 cut(s) 279, 291, 1406
Sau3AI GATC 9 cut(s) 57, 63, 350, 399, 510, 547, 1339, 1448, 1603
Sau96I GGNCC 3 cut(s) 781, 1540, 1616
SchI GAGTC 1 cut(s) 43
ScrFI CCNGG 2 cut(s) 884, 1556
SduI GDGCHC 3 cut(s) 16, 132, 1576
SfaNI GCATC 2 cut(s) 670, 1057
SfcI CTRYAG 1 cut(s) 1308
SinI GGWCC 2 cut(s) 781, 1616
SmiMI CAYNNNNRTG 3 cut(s) 1175, 1368, 1492
SmlI CTYRAG 3 cut(s) 380, 1036, 1409
SmoI CTYRAG 3 cut(s) 380, 1036, 1409
Sse9I AATT 9 cut(s) 371, 428, 921, 955, 1017, 1078, 1460, 1643, 1714
SsiI CCGC 2 cut(s) 779, 1614
SspI AATATT 1 cut(s) 1547
SspMI CTAG 3 cut(s) 339, 563, 1473
StyD4I CCNGG 2 cut(s) 882, 1554
StyI CCWWGG 3 cut(s) 693, 819, 1266
TaaI ACNGT 6 cut(s) 198, 585, 971, 1049, 1230, 1254
TaiI ACGT 1 cut(s) 426
TaqI TCGA 6 cut(s) 56, 402, 1015, 1215, 1338, 1437
TasI AATT 9 cut(s) 371, 428, 921, 955, 1017, 1078, 1460, 1643, 1714
TatI WGTACW 2 cut(s) 941, 1122
TfiI GAWTC 6 cut(s) 239, 668, 731, 794, 857, 1414
TscAI CASTG 3 cut(s) 976, 1177, 1235
TseI GCWGC 3 cut(s) 278, 290, 1405
TspDTI ATGAA 8 cut(s) 69, 159, 249, 459, 545, 1155, 1515, 1640
TspGWI ACGGA 2 cut(s) 560, 890
TspRI CASTG 3 cut(s) 976, 1177, 1235
Tth111I GACNNNGTC 1 cut(s) 222
Vha464I CTTAAG 2 cut(s) 380, 1036
VneI GTGCAC 1 cut(s) 1572
VpaK11BI GGWCC 2 cut(s) 781, 1616
XapI RAATTY 5 cut(s) 371, 955, 1017, 1078, 1460
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 1307
XmnI GAANNNNTTC 1 cut(s) 1653
XspI CTAG 3 cut(s) 339, 563, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.