Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0001743

Physical Location & Seq

Genomic Coordinates Reverse (-)

9681811 .. 9687355

Gene Structure 5545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11090.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGATCAGAAGACTGATACCCCCGCATCGCTCTCTCCTCCGCCGCCTCTCTTCCGCCGCCTCTCCTCCTCCTCCTCCACTCAACCTCTCTCACCATCTCTTCACCATCCTCTCCCGCCCAAACTGGCAGAAACACCCTTCCCTCAACACCCTAATCCCCTCCGTATCCCCATCCCACCTCTCCTCCCTCTTCGCCCTCAATCTCCACCCCCGCACCGCCCTCGACTTCTTCCACTGGCTCGCCGCCAAACCCCGCCTCCGCTGCAAACTCACCCCCCGCTCCCACTCCTCCTTGCTCCTCCTCCTCCTCCAACATCGCTTCTTCCGCGCCGCCGACAAGATCCGCATTTCCATGATTAGGGCTTCCGCTTCTCCCGACGACGCCCTCTTCGTCCTCGACCTTCTCCGCCGCTTGAACCGCCGCGCCGCCGATGGTCTTGATTTGGAATTCAAGCTCAATCTCAGGTCCTACAATTGGCTTCTCAACTTGTTGTCTAGGTTTTCGCTAATTGAAGACTTGAAAGCTGTGTATTTGGAAATGCTGGATGATAAGATTTTGCCGGATTTGTATACTTTTAACACTATGATTTTCGGCTACTGTAAATTGGGGAATGTGATTGAGGCTGACTTGTACTTCACTAAGTTACTGCAGGCGGGTTTCCGCCCTGCTACTTTCACCTGCAACTGTTTGATATTGGGGCATTGTAGGAATAATGATCTGGGCAGTGCTTTTCGGGTTTTTGAGCTAATGCCGGACAAGGGCTGTCCGCGGGATGTGGTTTCGTATAATTATTTGATTCATGGCCTTTGCGAGGCTGACCGGGTTGATGAAGCCTTTGAGTTGTTGTCTCGCATGGAGAAGGATGATTGCTTTCCTCAAGTGCGGACCTATAATGTTCTTGTTCATGGGTTTTGTAGACTGGGGAGGAAATTGGAAGCTGTGAGTTTGTTTAGGGAGATGAGTGAAAAGGGTTGTGAACCTGATGTGTGGACTTATAATGTGCTTGTTGATTGCGAGTGTAAGGAGGGTGAGCTTGATGAAGCTAGAAATTTGCTGAAACGGATGTTGGAGAAAGGGCTGGTCCCTGATGTTGTCACGTATACTGCACTGATTGATGGGTATTGCAAGGAGGGTGAAGTTGAGGTTGCTTTTGAGATTTTGGCTTCGATGGAATCAAATAATTGTTGTCCAAATGCTCACACGTACAATGCTTTGATTTATGGGTTTTGTAAAAGAAATTATGTGGAACGAGCAATGGCACTGCTCGATAAGATGCTTGCACGAAACCTCTCGCCAGACTTGATTACATTTACCTCACTAATTCATGGGCAGTGTCAAGCAGGTCATTTGGATAGTGCTTATAGGTTGCTTCATTTGATGAATCATAGTGGTTTGGTTCCTGACCAGTGCACTTACACTGTACTAATTGATGCTCTCTGCAAGAGGGGTAGATTAGAGGAAGCTCAAGCCCTATTTGAATCTCTCAAGGAGAAAGGCATCAAGTCAGATACAGTGATATTTACCGTCCTAATTGATGGGTTTTGCAAGGCTGGAAAACTCAGTGACGCCCTTTCTTTGTATGATAGAATGCTTACTGAGGATTGCTTGCCAAACTCTTACACCTACAACGCCTTGTTAGATGGGCTAGGCAAGCATAGTAAAAAGACAGAAGCATCAGTAGTGCTGCAGAAGATGTTAAGTTCGGGTGTGAAGCCTAAGGTTTGTGGTTATACAATTCTGATCCACCAAGTTCTTCAAGATGGTGACTTTGACCGAGCCCATAGGCTTTTCAATCAGATGGAGTCTGCTGGTAACCAACCTGATGTAGTTACTTTTGGTGTGTTTATTAGTGCATATTGCAGCACAGGGAATATAAAACAAGCAGAGAAGATGAGGAATATGATGTACGATGCTGGAATCACTGCAAATTCATGGATTTATACACTTATAATTGACGCATATGGGCGTATGGGATTAGTAGATTGTGCATTTGACGTTCTCAAGTACATGTTTGATGCTGGTTGCCAGCCTTCTCATCATACCTATTGTTCTCTAATCAAGCATCTTTCACATCAGAACTTGGTTAAGACAAATGATGGTATGGTTTCAAGGTTCTCATCCACGGGTATTCCTAATATATGGAAGACAATGGATTTTAAGATTGCTTTAGAGCTCTTCGAGAGGATGGTTGGACATGACTGTGCTCCCAATTTGAACACGTACAGGGAGCTTATAACAGGACTGTGCAAGGAAAGGAACTTGGAAGTGGCCCAGAGCTTATATGGCCACTTGAGAAATATGGGTATGTCTCCAAGCGAGGATATTTACAATGCTCTTCTTAATTGTTGCTGCGAGTTGCAATTGTATGGAAAGGCAGTGGAGCTGGTGGATACTATGATTGAGCATGGGTTTTTACCTGCGCTAGAGTCATGCAAGATGCTTTTATGTGGGCTTTTAGATGAAGAGAATAGTGCAAAGGCATATTCCGTTTTTCGTAGAATGCTATGCTGTGGGTATAACTATGATGAAATAGCTTGGAAAGTTCTCCTTGATGGTTGCGTTAAGAGGGGTCATTTAAATAGTTGCTCTGAGTTACTAACCATAATGGAGAAGATGGATTGCCAGCTACACCCTGAGTCGTACTCAATGTTGATTCAGGGACTCTATGGAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

892

Amino Acids

100.97

Weight (kDa)

6.65

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	155 - 201	3.5e-07	PPR repeat family
PPR_1	PF12854	185 - 208	1.3e-06	PPR repeat
TPR_24	PF23276	219 - 320	3.8e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	222 - 270	1.8e-14	PPR repeat family
PPR_1	PF12854	253 - 286	1.6e-12	PPR repeat
PPR_2	PF13041	257 - 306	4.5e-16	PPR repeat family
PPR_3	PF13812	258 - 301	5.4e-06	Pentatricopeptide repeat domain
PPR	PF01535	260 - 290	5.4e-07	PPR repeat
PPR_3	PF13812	281 - 336	2.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	289 - 321	2e-09	PPR repeat
PPR_2	PF13041	292 - 341	2.6e-15	PPR repeat family
PPR	PF01535	296 - 325	4e-08	PPR repeat
PPR_long	PF17177	313 - 475	1.6e-14	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	323 - 355	3.6e-11	PPR repeat
PPR	PF01535	331 - 360	3.4e-07	PPR repeat
PPR_2	PF13041	331 - 376	1.4e-14	PPR repeat family
PPR_3	PF13812	351 - 407	8.8e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	358 - 391	1.8e-13	PPR repeat
PPR_2	PF13041	362 - 411	2.3e-19	PPR repeat family
PPR	PF01535	365 - 395	6.3e-08	PPR repeat
PPR_1	PF12854	394 - 425	1.6e-11	PPR repeat
PPR_2	PF13041	397 - 445	1.4e-14	PPR repeat family
PPR	PF01535	401 - 429	4.3e-06	PPR repeat
PPR_3	PF13812	421 - 481	3.2e-09	Pentatricopeptide repeat domain
TPR_24	PF23276	426 - 529	9.1e-11	Fungal tetratrico peptide repeats
PPR_1	PF12854	428 - 460	5.2e-10	PPR repeat
PPR_2	PF13041	435 - 481	2.5e-13	PPR repeat family
PPR_1	PF12854	464 - 494	6.3e-11	PPR repeat
PPR_2	PF13041	467 - 504	3.3e-09	PPR repeat family
PPR	PF01535	471 - 500	4.9e-08	PPR repeat
TPR_24	PF23276	489 - 599	2.8e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	491 - 550	9.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	498 - 530	8.4e-10	PPR repeat
PPR_2	PF13041	503 - 551	2.2e-15	PPR repeat family
PPR	PF01535	505 - 535	2.3e-07	PPR repeat
PPR_long	PF17177	514 - 681	4.3e-13	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	541 - 582	2.8e-06	PPR repeat family
PPR_3	PF13812	561 - 619	1.4e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	572 - 620	4.8e-12	PPR repeat family
PPR_1	PF12854	606 - 635	3.9e-06	PPR repeat
PPR_2	PF13041	607 - 645	5.3e-06	PPR repeat family
PPR_2	PF13041	643 - 690	1.4e-09	PPR repeat family
PPR_long	PF17177	715 - 867	2.2e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	725 - 783	5.7e-07	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77340 AT5G65560 AT5G65560 AT5G65560
fragaria_vesca	FvH4_1g06430 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_7g04271 FvH4_7g04271
malus_domestica	MD03G1170600.v1.1 MD08G1245900.v1.1 MD11G1188000.v1.1 MD15G1441200.v1.1
prunus_persica	Prupe.1G583300_v2.0.a1 Prupe.4G256300_v2.0.a1
pyrus_communis	pycom03g12750 pycom08g21340 pycom15g38890 pycom15g38910
rosa_chinensis	RchiOBHm_Chr1g0329241 RchiOBHm_Chr2g0092171
rosa_laevigata	RLG00000016282 RLG00000029907
rosa_multiflora	Rmu_co8315275.1_g000001 Rmu_sc0000203.1_g000005 Rmu_sc0000524.1_g000014 Rmu_sc0010272.1_g000004 Rmu_sc0013552.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149410 Rroxscaffold_4G00321300
rosa_rugosa	Rorug01G0077300 Rorug01G0077300 Rorug02G0023500
rosa_samantha	Rh1AG096400 Rh1BG077100 Rh1CG093100 Rh1CG107900 Rh1DG099700 Rh1DG116600 Rh2AG069100 Rh2BG068600 Rh2CG069700 Rh2DG067700
rosa_wichuraiana	Rw1G007460 Rw2G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	996, 1949, 2234
AarI	CACCTGC	1 cut(s)	686
Acc36I	ACCTGC	3 cut(s)	686, 1331, 2425
AccBSI	CCGCTC	1 cut(s)	279
AccI	GTMKAC	3 cut(s)	569, 916, 1100
AccII	CGCG	3 cut(s)	327, 423, 769
AclWI	GGATC	2 cut(s)	334, 1735
AcoI	YGGCCR	1 cut(s)	2284
AcsI	RAATTY	3 cut(s)	446, 1048, 1927
AcyI	GRCGYC	2 cut(s)	381, 1566
AfaI	GTAC	7 cut(s)	632, 1205, 1422, 1907, 2006, 2222, 2642
AfiI	CCNNNNNNNGG	4 cut(s)	357, 474, 758, 811
AflIII	ACRYGT	3 cut(s)	1200, 2007, 2217
AgsI	TTSAA	9 cut(s)	415, 451, 512, 520, 1478, 1757, 1792, 2109, 2215
AjuI	GAANNNNNNNTTGG	2 cut(s)	1049, 1081
Alw21I	GWGCWC	3 cut(s)	1412, 2175, 2206
Alw26I	GTCTC	2 cut(s)	852, 2313
Alw44I	GTGCAC	1 cut(s)	1408
AlwI	GGATC	2 cut(s)	334, 1735
AoxI	GGCC	3 cut(s)	802, 2268, 2284
ApaLI	GTGCAC	1 cut(s)	1408
ApeKI	GCWGC	4 cut(s)	261, 1684, 1860, 2349
ApoI	RAATTY	3 cut(s)	446, 1048, 1927
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AspLEI	GCGC	3 cut(s)	329, 425, 2422
AspS9I	GGNCC	4 cut(s)	465, 885, 1081, 2269
AsuC2I	CCSGG	1 cut(s)	821
AsuHPI	GGTGA	7 cut(s)	83, 94, 262, 667, 1040, 1145, 1775
AvaII	GGWCC	3 cut(s)	465, 885, 1081
AxyI	CCTNAGG	1 cut(s)	1716
BaeGI	GKGCMC	1 cut(s)	1412
BalI	TGGCCA	1 cut(s)	2286
BanII	GRGCYC	2 cut(s)	1780, 2175
BbsI	GAAGAC	3 cut(s)	16, 519, 2150
Bbv12I	GWGCWC	3 cut(s)	1412, 2175, 2206
BbvI	GCAGC	4 cut(s)	248, 1671, 1872, 2336
BcgI	CGANNNNNNTGC	2 cut(s)	202, 236
BciVI	GTATCC	2 cut(s)	175, 2383
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	821
BcoDI	GTCTC	2 cut(s)	852, 2313
BfaI	CTAG	4 cut(s)	495, 1044, 1646, 2423
BfmI	CTRYAG	2 cut(s)	647, 1685
BfuAI	ACCTGC	3 cut(s)	686, 1331, 2425
BfuI	GTATCC	2 cut(s)	175, 2383
Bme1390I	CCNGG	1 cut(s)	821
Bme18I	GGWCC	3 cut(s)	465, 885, 1081
BmgT120I	GGNCC	4 cut(s)	465, 885, 1081, 2269
BmiI	GGNNCC	2 cut(s)	1083, 1398
BmrFI	CCNGG	1 cut(s)	821
BmrI	ACTGGG	1 cut(s)	929
BmsI	GCATC	9 cut(s)	34, 1263, 1420, 1506, 1682, 1900, 2005, 2071, 2427
BmuI	ACTGGG	1 cut(s)	929
BpiI	GAAGAC	3 cut(s)	16, 519, 2150
BplI	GAGNNNNNCTC	2 cut(s)	2627, 2659
BpuEI	CTTGAG	5 cut(s)	861, 1449, 1469, 1985, 2311
BpuMI	CCSGG	1 cut(s)	821
BsaAI	YACGTR	3 cut(s)	1098, 1203, 2220
BsaHI	GRCGYC	2 cut(s)	381, 1566
BsaJI	CCNNGG	2 cut(s)	767, 2121
BsaXI	ACNNNNNCTCC	4 cut(s)	167, 197, 240, 270
Bsc4I	CCNNNNNNNGG	4 cut(s)	357, 474, 758, 811
Bse1I	ACTGG	4 cut(s)	128, 239, 924, 1405
Bse21I	CCTNAGG	1 cut(s)	1716
Bse3DI	GCAATG	1 cut(s)	1260
BseDI	CCNNGG	2 cut(s)	767, 2121
BseGI	GGATG	8 cut(s)	105, 170, 550, 778, 868, 1068, 2117, 2190
BseLI	CCNNNNNNNGG	4 cut(s)	357, 474, 758, 811
BseMI	GCAATG	1 cut(s)	1260
BseMII	CTCAG	5 cut(s)	475, 1573, 1587, 2580, 2625
BseNI	ACTGG	4 cut(s)	128, 239, 924, 1405
BseSI	GKGCMC	1 cut(s)	1412
BseXI	GCAGC	4 cut(s)	248, 1671, 1872, 2336
BsgI	GTGCAG	1 cut(s)	1089
Bsh1236I	CGCG	3 cut(s)	327, 423, 769
BshFI	GGCC	3 cut(s)	804, 2270, 2286
BsiHKAI	GWGCWC	3 cut(s)	1412, 2175, 2206
BsiSI	CCGG	3 cut(s)	560, 752, 820
BslFI	GGGAC	1 cut(s)	1067
BslI	CCNNNNNNNGG	4 cut(s)	357, 474, 758, 811
BsmAI	GTCTC	2 cut(s)	852, 2313
BsmFI	GGGAC	1 cut(s)	1067
BsmI	GAATGC	2 cut(s)	1593, 2505
BsnI	GGCC	3 cut(s)	804, 2270, 2286
Bsp1286I	GDGCHC	4 cut(s)	1412, 1780, 2175, 2206
Bsp143I	GATC	4 cut(s)	3, 339, 715, 1740
BspANI	GGCC	3 cut(s)	804, 2270, 2286
BspCNI	CTCAG	5 cut(s)	474, 1572, 1588, 2581, 2626
BspFNI	CGCG	3 cut(s)	327, 423, 769
BspLI	GGNNCC	2 cut(s)	1083, 1398
BspMAI	CTGCAG	2 cut(s)	651, 1689
BspMI	ACCTGC	3 cut(s)	686, 1331, 2425
BspPI	GGATC	2 cut(s)	334, 1735
BspQI	GCTCTTC	2 cut(s)	2180, 2340
BsrBI	CCGCTC	1 cut(s)	279
BsrDI	GCAATG	1 cut(s)	1260
BsrI	ACTGG	4 cut(s)	128, 239, 924, 1405
BssECI	CCNNGG	2 cut(s)	767, 2121
BssMI	GATC	4 cut(s)	3, 339, 715, 1740
BssNAI	GTATAC	2 cut(s)	570, 1101
BssNI	GRCGYC	2 cut(s)	381, 1566
Bst1107I	GTATAC	2 cut(s)	570, 1101
Bst4CI	ACNGT	7 cut(s)	599, 686, 1420, 1513, 1525, 2201, 2244
Bst6I	CTCTTC	7 cut(s)	55, 104, 194, 392, 2180, 2340, 2457
BstACI	GRCGYC	2 cut(s)	381, 1566
BstBAI	YACGTR	3 cut(s)	1098, 1203, 2220
BstC8I	GCNNGC	7 cut(s)	240, 651, 1278, 1607, 1652, 2027, 2624
BstDEI	CTNAG	7 cut(s)	461, 639, 1559, 1596, 1716, 2589, 2634
BstDSI	CCRYGG	2 cut(s)	767, 2121
BstEII	GGTNACC	1 cut(s)	1811
BstENI	CCTNNNNNAGG	1 cut(s)	809
BstF5I	GGATG	8 cut(s)	105, 170, 550, 778, 868, 1068, 2117, 2190
BstFNI	CGCG	3 cut(s)	327, 423, 769
BstHHI	GCGC	3 cut(s)	329, 425, 2422
BstKTI	GATC	4 cut(s)	6, 342, 718, 1743
BstMAI	GTCTC	2 cut(s)	852, 2313
BstMBI	GATC	4 cut(s)	3, 339, 715, 1740
BstMWI	GCNNNNNNNGC	5 cut(s)	261, 324, 417, 1651, 2283
BstNSI	RCATGY	1 cut(s)	2011
BstPI	GGTNACC	1 cut(s)	1811
BstSCI	CCNGG	1 cut(s)	819
BstSFI	CTRYAG	2 cut(s)	647, 1685
BstSLI	GKGCMC	1 cut(s)	1412
BstUI	CGCG	3 cut(s)	327, 423, 769
BstV1I	GCAGC	4 cut(s)	248, 1671, 1872, 2336
BstV2I	GAAGAC	3 cut(s)	16, 519, 2150
BstX2I	RGATCY	1 cut(s)	339
BstYI	RGATCY	1 cut(s)	339
BstZ17I	GTATAC	2 cut(s)	570, 1101
Bsu36I	CCTNAGG	1 cut(s)	1716
BsuI	GTATCC	2 cut(s)	175, 2383
BsuRI	GGCC	3 cut(s)	804, 2270, 2286
BtgI	CCRYGG	2 cut(s)	767, 2121
BtgZI	GCGATG	2 cut(s)	11, 299
BtsCI	GGATG	8 cut(s)	105, 170, 550, 778, 868, 1068, 2117, 2190
BtsI	GCAGTG	5 cut(s)	730, 1259, 1337, 1920, 2382
BveI	ACCTGC	3 cut(s)	686, 1331, 2425
Cac8I	GCNNGC	7 cut(s)	240, 651, 1278, 1607, 1652, 2027, 2624
CfoI	GCGC	3 cut(s)	329, 425, 2422
Cfr13I	GGNCC	4 cut(s)	465, 885, 1081, 2269
Cfr42I	CCGCGG	1 cut(s)	770
CseI	GACGC	3 cut(s)	389, 1574, 1964
Csp6I	GTAC	7 cut(s)	631, 1204, 1421, 1906, 2005, 2221, 2641
CviQI	GTAC	7 cut(s)	631, 1204, 1421, 1906, 2005, 2221, 2641
DdeI	CTNAG	7 cut(s)	461, 639, 1559, 1596, 1716, 2589, 2634
DpnI	GATC	4 cut(s)	5, 341, 717, 1742
DpnII	GATC	4 cut(s)	3, 339, 715, 1740
DraI	TTTAAA	1 cut(s)	2577
EaeI	YGGCCR	1 cut(s)	2284
Eam1104I	CTCTTC	7 cut(s)	55, 104, 194, 392, 2180, 2340, 2457
EarI	CTCTTC	7 cut(s)	55, 104, 194, 392, 2180, 2340, 2457
EciI	GGCGGA	4 cut(s)	29, 43, 395, 650
Ecl136II	GAGCTC	1 cut(s)	2173
Eco24I	GRGCYC	2 cut(s)	1780, 2175
Eco47I	GGWCC	3 cut(s)	465, 885, 1081
Eco53kI	GAGCTC	1 cut(s)	2173
Eco81I	CCTNAGG	1 cut(s)	1716
Eco91I	GGTNACC	1 cut(s)	1811
EcoICRI	GAGCTC	1 cut(s)	2173
EcoNI	CCTNNNNNAGG	1 cut(s)	809
EcoO109I	RGGNCCY	1 cut(s)	465
EcoO65I	GGTNACC	1 cut(s)	1811
EcoRI	GAATTC	1 cut(s)	446
EcoT38I	GRGCYC	2 cut(s)	1780, 2175
FalI	AAGNNNNNCTT	2 cut(s)	2532, 2564
FaqI	GGGAC	1 cut(s)	1067
FauI	CCCGC	7 cut(s)	30, 122, 218, 260, 284, 646, 762
FauNDI	CATATG	1 cut(s)	1960
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	3 cut(s)	569, 916, 1100
FokI	GGATG	8 cut(s)	92, 157, 557, 785, 875, 1075, 2104, 2197
FriOI	GRGCYC	2 cut(s)	1780, 2175
FspBI	CTAG	4 cut(s)	495, 1044, 1646, 2423
GlaI	GCGC	3 cut(s)	328, 424, 2421
HaeIII	GGCC	3 cut(s)	804, 2270, 2286
HapII	CCGG	3 cut(s)	560, 752, 820
HgaI	GACGC	3 cut(s)	389, 1574, 1964
HhaI	GCGC	3 cut(s)	329, 425, 2422
Hin1I	GRCGYC	2 cut(s)	381, 1566
Hin6I	GCGC	3 cut(s)	327, 423, 2420
HinP1I	GCGC	3 cut(s)	327, 423, 2420
HpaII	CCGG	3 cut(s)	560, 752, 820
HphI	GGTGA	7 cut(s)	83, 94, 262, 667, 1040, 1145, 1775
Hpy166II	GTNNAC	6 cut(s)	570, 917, 977, 990, 1101, 1410
Hpy188I	TCNGA	6 cut(s)	8, 1507, 1740, 1797, 2076, 2590
Hpy188III	TCNNGA	5 cut(s)	374, 437, 1400, 1757, 2179
Hpy8I	GTNNAC	6 cut(s)	570, 917, 977, 990, 1101, 1410
Hpy99I	CGWCG	2 cut(s)	380, 383
HpyAV	CCTTC	4 cut(s)	147, 410, 853, 2040
HpyCH4III	ACNGT	7 cut(s)	599, 686, 1420, 1513, 1525, 2201, 2244
HpyCH4IV	ACGT	4 cut(s)	1097, 1202, 1995, 2219
HpyF10VI	GCNNNNNNNGC	5 cut(s)	261, 324, 417, 1651, 2283
HpyF3I	CTNAG	7 cut(s)	461, 639, 1559, 1596, 1716, 2589, 2634
HpySE526I	ACGT	4 cut(s)	1097, 1202, 1995, 2219
Hsp92I	GRCGYC	2 cut(s)	381, 1566
HspAI	GCGC	3 cut(s)	327, 423, 2420
Ksp22I	TGATCA	1 cut(s)	3
KspI	CCGCGG	1 cut(s)	770
Kzo9I	GATC	4 cut(s)	3, 339, 715, 1740
LguI	GCTCTTC	2 cut(s)	2180, 2340
LmnI	GCTCC	5 cut(s)	284, 300, 2209, 2227, 2380
Lsp1109I	GCAGC	4 cut(s)	248, 1671, 1872, 2336
LweI	GCATC	9 cut(s)	34, 1263, 1420, 1506, 1682, 1900, 2005, 2071, 2427
MaeI	CTAG	4 cut(s)	495, 1044, 1646, 2423
MaeII	ACGT	4 cut(s)	1097, 1202, 1995, 2219
MaeIII	GTNAC	7 cut(s)	642, 1093, 1562, 1763, 1811, 1828, 2592
MalI	GATC	4 cut(s)	5, 341, 717, 1742
MbiI	CCGCTC	1 cut(s)	279
MboI	GATC	4 cut(s)	3, 339, 715, 1740
MfeI	CAATTG	2 cut(s)	472, 2360
MflI	RGATCY	1 cut(s)	339
MhlI	GDGCHC	4 cut(s)	1412, 1780, 2175, 2206
MlsI	TGGCCA	1 cut(s)	2286
MluNI	TGGCCA	1 cut(s)	2286
MlyI	GAGTC	4 cut(s)	1811, 2435, 2645, 2655
MmeI	TCCRAC	3 cut(s)	334, 1047, 2170
Mox20I	TGGCCA	1 cut(s)	2286
MscI	TGGCCA	1 cut(s)	2286
MseI	TTAA	8 cut(s)	576, 1697, 2085, 2157, 2340, 2562, 2576, 2674
MslI	CAYNNNNRTG	2 cut(s)	350, 2199
Msp20I	TGGCCA	1 cut(s)	2286
MspA1I	CMGCKG	2 cut(s)	261, 769
MspI	CCGG	3 cut(s)	560, 752, 820
MspR9I	CCNGG	1 cut(s)	821
MunI	CAATTG	2 cut(s)	472, 2360
Mva1269I	GAATGC	2 cut(s)	1593, 2505
MvnI	CGCG	3 cut(s)	327, 423, 769
MwoI	GCNNNNNNNGC	5 cut(s)	261, 324, 417, 1651, 2283
NciI	CCSGG	1 cut(s)	821
NdeI	CATATG	1 cut(s)	1960
NdeII	GATC	4 cut(s)	3, 339, 715, 1740
NlaIV	GGNNCC	2 cut(s)	1083, 1398
NmuCI	GTSAC	3 cut(s)	1093, 1562, 1763
NspI	RCATGY	1 cut(s)	2011
PaqCI	CACCTGC	1 cut(s)	686
PciI	ACATGT	1 cut(s)	2007
PciSI	GCTCTTC	2 cut(s)	2180, 2340
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PctI	GAATGC	2 cut(s)	1593, 2505
PfeI	GAWTC	6 cut(s)	796, 1172, 1381, 1478, 1917, 2653
PleI	GAGTC	4 cut(s)	1810, 2434, 2644, 2655
PpsI	GAGTC	4 cut(s)	1810, 2434, 2644, 2655
Ppu21I	YACGTR	3 cut(s)	1098, 1203, 2220
PpuMI	RGGWCCY	1 cut(s)	465
PscI	ACATGT	1 cut(s)	2007
PsiI	TTATAA	3 cut(s)	996, 1949, 2234
Psp124BI	GAGCTC	1 cut(s)	2175
Psp5II	RGGWCCY	1 cut(s)	465
PspEI	GGTNACC	1 cut(s)	1811
PspN4I	GGNNCC	2 cut(s)	1083, 1398
PspPI	GGNCC	4 cut(s)	465, 885, 1081, 2269
PspPPI	RGGWCCY	1 cut(s)	465
PstI	CTGCAG	2 cut(s)	651, 1689
PsuI	RGATCY	1 cut(s)	339
RsaI	GTAC	7 cut(s)	632, 1205, 1422, 1907, 2006, 2222, 2642
RsaNI	GTAC	7 cut(s)	631, 1204, 1421, 1906, 2005, 2221, 2641
RseI	CAYNNNNRTG	2 cut(s)	350, 2199
SacI	GAGCTC	1 cut(s)	2175
SacII	CCGCGG	1 cut(s)	770
SapI	GCTCTTC	2 cut(s)	2180, 2340
SaqAI	TTAA	8 cut(s)	576, 1697, 2085, 2157, 2340, 2562, 2576, 2674
Sau3AI	GATC	4 cut(s)	3, 339, 715, 1740
Sau96I	GGNCC	4 cut(s)	465, 885, 1081, 2269
SchI	GAGTC	4 cut(s)	1811, 2435, 2645, 2655
ScrFI	CCNGG	1 cut(s)	821
SduI	GDGCHC	4 cut(s)	1412, 1780, 2175, 2206
SfaNI	GCATC	9 cut(s)	34, 1263, 1420, 1506, 1682, 1900, 2005, 2071, 2427
SfcI	CTRYAG	2 cut(s)	647, 1685
Sfr303I	CCGCGG	1 cut(s)	770
SgrBI	CCGCGG	1 cut(s)	770
SinI	GGWCC	3 cut(s)	465, 885, 1081
SmiI	ATTTAAAT	1 cut(s)	2577
SmiMI	CAYNNNNRTG	2 cut(s)	350, 2199
SmlI	CTYRAG	5 cut(s)	876, 1464, 1484, 2000, 2290
SmoI	CTYRAG	5 cut(s)	876, 1464, 1484, 2000, 2290
SspMI	CTAG	4 cut(s)	495, 1044, 1646, 2423
SstI	GAGCTC	1 cut(s)	2175
StyD4I	CCNGG	1 cut(s)	819
SwaI	ATTTAAAT	1 cut(s)	2577
TaaI	ACNGT	7 cut(s)	599, 686, 1420, 1513, 1525, 2201, 2244
TaiI	ACGT	4 cut(s)	1100, 1205, 1998, 2222
TaqI	TCGA	5 cut(s)	222, 396, 1166, 1266, 2178
TaqII	GACCGA	1 cut(s)	1788
TatI	WGTACW	3 cut(s)	630, 1420, 2004
TauI	GCSGC	7 cut(s)	45, 59, 245, 332, 411, 423, 428
TfiI	GAWTC	6 cut(s)	796, 1172, 1381, 1478, 1917, 2653
Tru1I	TTAA	8 cut(s)	576, 1697, 2085, 2157, 2340, 2562, 2576, 2674
Tru9I	TTAA	8 cut(s)	576, 1697, 2085, 2157, 2340, 2562, 2576, 2674
TseFI	GTSAC	3 cut(s)	1093, 1562, 1763
TseI	GCWGC	4 cut(s)	261, 1684, 1860, 2349
Tsp45I	GTSAC	3 cut(s)	1093, 1562, 1763
TspGWI	ACGGA	3 cut(s)	151, 1075, 2476
VneI	GTGCAC	1 cut(s)	1408
VpaK11BI	GGWCC	3 cut(s)	465, 885, 1081
XagI	CCTNNNNNAGG	1 cut(s)	809
XapI	RAATTY	3 cut(s)	446, 1048, 1927
XceI	RCATGY	1 cut(s)	2011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2279
XmiI	GTMKAC	3 cut(s)	569, 916, 1100
XspI	CTAG	4 cut(s)	495, 1044, 1646, 2423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.