Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001743

Physical Location & Seq

Genomic Coordinates Forward (+)

47363261 .. 47370507

Gene Structure 7247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G583300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2748 bp

ATGATGAGAAAACCCAAACCCATTGCCATTATCTGTTGTATCAACCACCCACCTGAGCCCTTCCTCTCTCTCCTCCTCCTCATCAAACCCTTCTCCACCTCTTCCACCACTGCCGCTGCTTCTCCTTCTCTTCCTCCAGTCCCCGAACAGCCAGTGGATCTCTCCTCCCAGCTCTTCGCCATTCTCTCCCGCCCCAATTGGCAACGCCACCCTTCCCTCAAGAAACTAATCCCCTCCATTTCCGCTTCCCACGTCTCTTCCCTTTTCGCTCTCAATCTCGATCCCCAGACCGCCCTCGGCTTCTTCAACTGGATCGCCCTCAAACCCGGTTACAGGCACACCGTCCATTGCCATTCCTCCTTGCTCAACATTCTGATCCCCAATGGGTTCTTCCGGGTCGCCGAAAAGATCCGAATTTCGATGATCAAGGCTTCCACTTCCGCTCAGGATGCCTTGTTTGTGCTCGAATTTTTGCGGGGAATGAACCGCGCACTAGAATTCGAGTTCAAGCTCACTGTCAGGTGCTACAACTTGCTCCTAATGTCATTGTCTAGGTTTTCCTTGTTTGAAGATTTGAAAACTCTGTATTTGGAGATGTTAGACGATATGGTTTCGCCGAATTTGCATACGTTTAATACCATGATCAATGCTTCCTGTAAATTGGGCAATGTGGCTGAGGCAGACTTGTATTTTAGTAAGATAGGGCAGGCGGGCTTGCGCCCTGATACGTTTACGTACACTTCTTTGATTCTGGGACATTGTAGGAATAAGGATGTGGATACTAGCTATAGGGTTTTTAAGCTAATGCCGCACAAGGGTTGTCAAAGAAATGAGGTTTCCTATACTAATTTAATACATGGGTTTTGTGAGGTAGGTCGGATTGATGAGGCTTTCAAGTTGTTTTCTCAAATGGGGGAGGATAATTGTTTTCCAACTGTGCGTACATTTACCGTTCTTATTTGTGCATTGTGTAAATTGGGAAGGAAATTAGAAGCTATGAATCTATTTAAAGAGATGACGGACAAGGGTTGTGAACCAAATATTCATACTTATACCGTGCTCATTGATAGTATGTGTAAGGAAAATAAGCTTGATGAGGCTAGAAACTTGCTAAACAAGATGTTGGAGAAAGGGTTGGTTCCTAATGTTGTCACCTACAACGCAATGATTGATGGGTACTGTAAGGAGGGAACAGTTGAGGCTGCACTTGATATTTTGGCTTTGATGGAATCAAGTAATTGTTGTCCAAATGCTCGAACATTCAATGAATTGATTTCCGGGTTTTGTAAAAGGAAAAATGTATACCAGGCAATGACACTGCTTAATAAGATGCTTGATCGGAAGCTCTTGCCAAGCCTAGTTACATATAATTCATTAATCCATGGGCAGTGTAAGATAGGCCATTTGGATAGTGCTTATAGGTTGGTTAATTTGATGAAAGATAGTGGTTTGGTTCCTGACCAATGGACTTACAGTGTTCTCATAGACACTCTCTGTAAGAGGGGGAGATTGGAAGAAGCTCATGCCCTGTTCGATTCTCTCAAAGAGAAAGGCATAAAGTCAAATGAAGTGATCTTTACTGCTTTGATTGATGGTTATTGCAAGGTTGGGAAAGTCAGCGATGCCCATTCCTTGTTTGATAGAATGCTTGCAGAAGACTGTTCGCCAAACTCGTACACTTACAATACCTTGATAGATGTGTTGTGCAAAGAAAGAAAACTGAAGGAAGGATTATTACTGGTGGAAAAAATGTTAAGTATTGGTGTGAAACCTACGGTACCTACTTATACAATTCTAATTAAGCAAATGTTGAAAGAAGGGGACTTTGACCATGCTCATAGGCTTTTCGACCAGATGGTGTGTTCTGGTAATCAACCTGACCTATTTACTTACACTACATTTATTCATGCATATTGCGGCATAGGGAATGTAGAAGAGGCAGAGAAGCTGATGATTAAGATGAATGAAGAAGGAATTATAGCAGACTCATTGACTTATACATTATTAATTGATGCATATGGACGTATGGGATTAATTGAATTGGCATTTGATGTTCTTAAGCGTATGTCAAATGCTTGTTGTGATCCTTCTCACTATACCTATGCCTTTCTGATCAAACATCTTTCGAATGAAAAGTTAATGAAGACAAACAATAATATAGTGGGACTTGATTTGGTCCCAAATGTCTCCTCCATCGATATTACTGGTGTTTGGAAGACAATGGATTTTGAAATTGCTTTAGAGCTCTTTGAAAAAATGGTTGGGCATGGTTGTGCACCCAGTACGAACACTTATGACAAGCTTATAGTAGGTCTTTGCAAAGAGGGACGCTTGGACGTAGCCCAGAGGTTATACAGTCATATGAGAGAGAGAGGAATTTCTCCCAGTGAGGATATTTATAATTCTCTTCTTACTTGTTGCTGTAAGTTGCAAGTGTATGGAGAGGCATCAATATTGGTGGATGCGATGATTGAGGATGGTTATTTACCAACATTGGAGTCCTCAATGTTGCTTGTATGTGGGCTTCTTGATCAAGAGAAGACTGAGAAGGCAAAAGCCGTTTTTCGTACTTTGCTTCGTTGTGGGTATAACTACGATGAAGTAGCTTGGAAAGTTCTCCTTGATGGTTTACTTAAGAGGGGTCTTGTCAATATATGCTCTGAGCTCGTAAGCATCATGGAGAAGATGGGTTGCCAGCTTCATCCTCAGACATATTCGATGTTGATTGAGGGAATTGATGGACCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

916

Amino Acids

102.94

Weight (kDa)

6.55

Isoelectric Point (pI)

29.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77340 AT5G65560 AT5G65560 AT5G65560
fragaria_vesca	FvH4_1g06430 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_2g11090 FvH4_7g04271 FvH4_7g04271
malus_domestica	MD03G1170600.v1.1 MD08G1245900.v1.1 MD11G1188000.v1.1 MD15G1441200.v1.1
prunus_persica	Prupe.1G583300_v2.0.a1 Prupe.4G256300_v2.0.a1
pyrus_communis	pycom03g12750 pycom08g21340 pycom15g38890 pycom15g38910
rosa_chinensis	RchiOBHm_Chr1g0329241 RchiOBHm_Chr2g0092171
rosa_laevigata	RLG00000016282 RLG00000029907
rosa_multiflora	Rmu_co8315275.1_g000001 Rmu_sc0000203.1_g000005 Rmu_sc0000524.1_g000014 Rmu_sc0010272.1_g000004 Rmu_sc0013552.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149410 Rroxscaffold_4G00321300
rosa_rugosa	Rorug01G0077300 Rorug01G0077300 Rorug02G0023500
rosa_samantha	Rh1AG096400 Rh1BG077100 Rh1CG093100 Rh1CG107900 Rh1DG099700 Rh1DG116600 Rh2AG069100 Rh2BG068600 Rh2CG069700 Rh2DG067700
rosa_wichuraiana	Rw1G007460 Rw2G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2400
Acc65I	GGTACC	1 cut(s)	1777
AccB1I	GGYRCC	1 cut(s)	1777
AccBSI	CCGCTC	1 cut(s)	443
AccI	GTMKAC	1 cut(s)	1302
AccII	CGCG	1 cut(s)	489
AclWI	GGATC	6 cut(s)	165, 275, 320, 370, 403, 2078
AcsI	RAATTY	5 cut(s)	414, 467, 497, 619, 2376
AcuI	CTGAAG	1 cut(s)	1742
AfaI	GTAC	7 cut(s)	737, 943, 1178, 1676, 1779, 2284, 2569
AfiI	CCNNNNNNNGG	2 cut(s)	333, 815
AflII	CTTAAG	2 cut(s)	2057, 2633
AjiI	CACGTC	1 cut(s)	253
AjnI	CCWGG	1 cut(s)	1305
AjuI	GAANNNNNNNTTGG	4 cut(s)	374, 406, 2244, 2276
Alw21I	GWGCWC	5 cut(s)	465, 1062, 2247, 2278, 2667
Alw26I	GTCTC	2 cut(s)	259, 2191
Alw44I	GTGCAC	1 cut(s)	2274
AlwI	GGATC	6 cut(s)	165, 275, 320, 370, 403, 2078
AoxI	GGCC	1 cut(s)	1399
ApaLI	GTGCAC	1 cut(s)	2274
ApeKI	GCWGC	2 cut(s)	116, 1202
ApoI	RAATTY	5 cut(s)	414, 467, 497, 619, 2376
AseI	ATTAAT	3 cut(s)	1376, 2006, 2033
Asp718I	GGTACC	1 cut(s)	1777
AspLEI	GCGC	2 cut(s)	491, 720
AspS9I	GGNCC	2 cut(s)	2176, 2741
AsuC2I	CCSGG	3 cut(s)	327, 395, 1279
AsuHPI	GGTGA	1 cut(s)	1144
AsuII	TTCGAA	1 cut(s)	2126
AvaII	GGWCC	2 cut(s)	2176, 2741
BaeGI	GKGCMC	1 cut(s)	2278
BanI	GGYRCC	1 cut(s)	1777
BanII	GRGCYC	3 cut(s)	60, 2247, 2667
BarI	GAAGNNNNNNTAC	4 cut(s)	1719, 1751, 2508, 2540
BbsI	GAAGAC	4 cut(s)	1662, 2150, 2222, 2546
Bbv12I	GWGCWC	5 cut(s)	465, 1062, 2247, 2278, 2667
BbvCI	CCTCAGC	1 cut(s)	675
BbvI	GCAGC	2 cut(s)	103, 1189
BccI	CCATC	9 cut(s)	1166, 1219, 1586, 1849, 2201, 2471, 2618, 2680, 2732
BceAI	ACGGC	1 cut(s)	2543
BciT130I	CCWGG	1 cut(s)	1307
BciVI	GTATCC	1 cut(s)	772
BclI	TGATCA	4 cut(s)	423, 642, 2112, 2530
BcnI	CCSGG	3 cut(s)	327, 395, 1279
BcoDI	GTCTC	2 cut(s)	259, 2191
BfaI	CTAG	5 cut(s)	494, 552, 783, 1101, 1358
BfmI	CTRYAG	1 cut(s)	787
BfrI	CTTAAG	2 cut(s)	2057, 2633
BfuI	GTATCC	1 cut(s)	772
BisI	GCNGC	5 cut(s)	114, 117, 809, 1203, 1918
BlsI	GCNGC	5 cut(s)	115, 118, 810, 1204, 1919
Bme1390I	CCNGG	4 cut(s)	327, 395, 1279, 1307
Bme18I	GGWCC	2 cut(s)	2176, 2741
BmgBI	CACGTC	1 cut(s)	253
BmgT120I	GGNCC	2 cut(s)	2176, 2741
BmiI	GGNNCC	4 cut(s)	1140, 1455, 1779, 2178
BmrFI	CCNGG	4 cut(s)	327, 395, 1279, 1307
BmrI	ACTGGG	2 cut(s)	2274, 2379
BmsI	GCATC	7 cut(s)	439, 1320, 1612, 2002, 2452, 2456, 2682
BmuI	ACTGGG	2 cut(s)	2274, 2379
BpiI	GAAGAC	4 cut(s)	1662, 2150, 2222, 2546
BpmI	CTGGAG	1 cut(s)	120
Bpu10I	CCTNAGC	3 cut(s)	54, 444, 675
Bpu14I	TTCGAA	1 cut(s)	2126
BpuEI	CTTGAG	1 cut(s)	203
BpuMI	CCSGG	3 cut(s)	327, 395, 1279
Bsa29I	ATCGAT	1 cut(s)	2196
BsaAI	YACGTR	1 cut(s)	735
BsaJI	CCNNGG	2 cut(s)	295, 1381
BsaXI	ACNNNNNCTCC	2 cut(s)	1118, 1148
Bsc4I	CCNNNNNNNGG	2 cut(s)	333, 815
Bse1I	ACTGG	7 cut(s)	137, 152, 314, 1743, 2209, 2280, 2385
Bse3DI	GCAATG	5 cut(s)	21, 346, 673, 1170, 1317
BseBI	CCWGG	1 cut(s)	1307
BseCI	ATCGAT	1 cut(s)	2196
BseDI	CCNNGG	2 cut(s)	295, 1381
BseGI	GGATG	5 cut(s)	454, 778, 2467, 2482, 2701
BseLI	CCNNNNNNNGG	2 cut(s)	333, 815
BseMI	GCAATG	5 cut(s)	21, 346, 673, 1170, 1317
BseMII	CTCAG	6 cut(s)	45, 458, 666, 2535, 2652, 2720
BseNI	ACTGG	7 cut(s)	137, 152, 314, 1743, 2209, 2280, 2385
BseRI	GAGGAG	5 cut(s)	62, 65, 68, 154, 2179
BseSI	GKGCMC	1 cut(s)	2278
BseXI	GCAGC	2 cut(s)	103, 1189
BseYI	CCCAGC	1 cut(s)	168
BsgI	GTGCAG	1 cut(s)	1188
Bsh1236I	CGCG	1 cut(s)	489
BshFI	GGCC	1 cut(s)	1401
BshNI	GGYRCC	1 cut(s)	1777
BshVI	ATCGAT	1 cut(s)	2196
BsiHKAI	GWGCWC	5 cut(s)	465, 1062, 2247, 2278, 2667
BsiSI	CCGG	3 cut(s)	327, 394, 1278
BslFI	GGGAC	6 cut(s)	125, 768, 1835, 2162, 2178, 2340
BslI	CCNNNNNNNGG	2 cut(s)	333, 815
BsmAI	GTCTC	2 cut(s)	259, 2191
BsmBI	CGTCTC	1 cut(s)	259
BsmFI	GGGAC	6 cut(s)	125, 768, 1835, 2162, 2178, 2340
BsmI	GAATGC	1 cut(s)	1650
BsnI	GGCC	1 cut(s)	1401
Bsp119I	TTCGAA	1 cut(s)	2126
Bsp1286I	GDGCHC	6 cut(s)	60, 465, 1062, 2247, 2278, 2667
Bsp19I	CCATGG	1 cut(s)	1381
BspANI	GGCC	1 cut(s)	1401
BspCNI	CTCAG	6 cut(s)	46, 457, 667, 2536, 2653, 2719
BspDI	ATCGAT	1 cut(s)	2196
BspFNI	CGCG	1 cut(s)	489
BspLI	GGNNCC	4 cut(s)	1140, 1455, 1779, 2178
BspPI	GGATC	6 cut(s)	165, 275, 320, 370, 403, 2078
BspQI	GCTCTTC	1 cut(s)	179
BspT104I	TTCGAA	1 cut(s)	2126
BspT107I	GGYRCC	1 cut(s)	1777
BspTI	CTTAAG	2 cut(s)	2057, 2633
BsrBI	CCGCTC	1 cut(s)	443
BsrDI	GCAATG	5 cut(s)	21, 346, 673, 1170, 1317
BsrI	ACTGG	7 cut(s)	137, 152, 314, 1743, 2209, 2280, 2385
BssECI	CCNNGG	2 cut(s)	295, 1381
BssNAI	GTATAC	1 cut(s)	1303
BssT1I	CCWWGG	1 cut(s)	1381
Bst1107I	GTATAC	1 cut(s)	1303
Bst2UI	CCWGG	1 cut(s)	1307
Bst6I	CTCTTC	6 cut(s)	106, 135, 179, 262, 1929, 2412
BstAFI	CTTAAG	2 cut(s)	2057, 2633
BstBAI	YACGTR	1 cut(s)	735
BstBI	TTCGAA	1 cut(s)	2126
BstC8I	GCNNGC	5 cut(s)	708, 712, 716, 1650, 2696
BstDEI	CTNAG	6 cut(s)	54, 444, 675, 2544, 2661, 2706
BstDSI	CCRYGG	1 cut(s)	1381
BstF5I	GGATG	5 cut(s)	454, 778, 2467, 2482, 2701
BstFNI	CGCG	1 cut(s)	489
BstHHI	GCGC	2 cut(s)	491, 720
BstMAI	GTCTC	2 cut(s)	259, 2191
BstMWI	GCNNNNNNNGC	3 cut(s)	449, 622, 808
BstNI	CCWGG	1 cut(s)	1307
BstSCI	CCNGG	4 cut(s)	325, 393, 1277, 1305
BstSFI	CTRYAG	1 cut(s)	787
BstSLI	GKGCMC	1 cut(s)	2278
BstSNI	TACGTA	1 cut(s)	735
BstUI	CGCG	1 cut(s)	489
BstV1I	GCAGC	2 cut(s)	103, 1189
BstV2I	GAAGAC	4 cut(s)	1662, 2150, 2222, 2546
BstX2I	RGATCY	2 cut(s)	157, 408
BstYI	RGATCY	2 cut(s)	157, 408
BstZ17I	GTATAC	1 cut(s)	1303
Bsu15I	ATCGAT	1 cut(s)	2196
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	1 cut(s)	1401
BsuTUI	ATCGAT	1 cut(s)	2196
BtgI	CCRYGG	1 cut(s)	1381
BtgZI	GCGATG	2 cut(s)	1635, 2480
BtrI	CACGTC	1 cut(s)	253
BtsCI	GGATG	5 cut(s)	454, 778, 2467, 2482, 2701
BtsI	GCAGTG	3 cut(s)	108, 1316, 1394
BtsIMutI	CAGTG	7 cut(s)	108, 159, 513, 1316, 1394, 1480, 2392
Cac8I	GCNNGC	5 cut(s)	708, 712, 716, 1650, 2696
CfoI	GCGC	2 cut(s)	491, 720
Cfr13I	GGNCC	2 cut(s)	2176, 2741
ClaI	ATCGAT	1 cut(s)	2196
CseI	GACGC	1 cut(s)	2337
Csp6I	GTAC	7 cut(s)	736, 942, 1177, 1675, 1778, 2283, 2568
CspCI	CAANNNNNGTGG	2 cut(s)	2439, 2474
CviAII	CATG	8 cut(s)	640, 857, 1382, 1523, 1832, 1907, 2267, 2677
CviQI	GTAC	7 cut(s)	736, 942, 1177, 1675, 1778, 2283, 2568
DdeI	CTNAG	6 cut(s)	54, 444, 675, 2544, 2661, 2706
DraI	TTTAAA	1 cut(s)	1009
Eam1104I	CTCTTC	6 cut(s)	106, 135, 179, 262, 1929, 2412
EarI	CTCTTC	6 cut(s)	106, 135, 179, 262, 1929, 2412
Ecl136II	GAGCTC	2 cut(s)	2245, 2665
Eco105I	TACGTA	1 cut(s)	735
Eco130I	CCWWGG	1 cut(s)	1381
Eco24I	GRGCYC	3 cut(s)	60, 2247, 2667
Eco47I	GGWCC	2 cut(s)	2176, 2741
Eco53kI	GAGCTC	2 cut(s)	2245, 2665
Eco57I	CTGAAG	1 cut(s)	1742
EcoICRI	GAGCTC	2 cut(s)	2245, 2665
EcoRI	GAATTC	1 cut(s)	497
EcoRII	CCWGG	1 cut(s)	1305
EcoT14I	CCWWGG	1 cut(s)	1381
EcoT22I	ATGCAT	2 cut(s)	1912, 2017
EcoT38I	GRGCYC	3 cut(s)	60, 2247, 2667
ErhI	CCWWGG	1 cut(s)	1381
Esp3I	CGTCTC	1 cut(s)	259
FaeI	CATG	8 cut(s)	643, 860, 1385, 1526, 1835, 1910, 2270, 2680
FalI	AAGNNNNNCTT	2 cut(s)	2604, 2636
FaqI	GGGAC	6 cut(s)	125, 768, 1835, 2162, 2178, 2340
FatI	CATG	8 cut(s)	639, 856, 1381, 1522, 1831, 1906, 2266, 2676
FauI	CCCGC	3 cut(s)	197, 468, 703
FauNDI	CATATG	2 cut(s)	2017, 2361
FbaI	TGATCA	4 cut(s)	423, 642, 2112, 2530
FblI	GTMKAC	1 cut(s)	1302
Fnu4HI	GCNGC	5 cut(s)	114, 117, 809, 1203, 1918
FokI	GGATG	5 cut(s)	461, 785, 2474, 2489, 2688
FriOI	GRGCYC	3 cut(s)	60, 2247, 2667
Fsp4HI	GCNGC	5 cut(s)	114, 117, 809, 1203, 1918
FspBI	CTAG	5 cut(s)	494, 552, 783, 1101, 1358
GlaI	GCGC	2 cut(s)	490, 719
GluI	GCNGC	5 cut(s)	114, 117, 809, 1203, 1918
GsaI	CCCAGC	1 cut(s)	172
GsuI	CTGGAG	1 cut(s)	120
HaeIII	GGCC	1 cut(s)	1401
HapII	CCGG	3 cut(s)	327, 394, 1278
HgaI	GACGC	1 cut(s)	2337
HhaI	GCGC	2 cut(s)	491, 720
Hin1II	CATG	8 cut(s)	643, 860, 1385, 1526, 1835, 1910, 2270, 2680
Hin6I	GCGC	2 cut(s)	489, 718
HinP1I	GCGC	2 cut(s)	489, 718
HindIII	AAGCTT	2 cut(s)	1088, 2300
HinfI	GANTC	6 cut(s)	748, 1000, 1229, 1535, 1985, 2498
HpaII	CCGG	3 cut(s)	327, 394, 1278
HphI	GGTGA	1 cut(s)	1144
Hpy166II	GTNNAC	7 cut(s)	732, 738, 1034, 1303, 1677, 2276, 2630
Hpy188I	TCNGA	7 cut(s)	375, 413, 879, 1341, 2112, 2662, 2709
Hpy188III	TCNNGA	6 cut(s)	220, 278, 446, 1457, 2528, 2534
Hpy8I	GTNNAC	7 cut(s)	732, 738, 1034, 1303, 1677, 2276, 2630
HpyCH4IV	ACGT	6 cut(s)	252, 629, 728, 734, 2023, 2337
HpyF10VI	GCNNNNNNNGC	3 cut(s)	449, 622, 808
HpyF3I	CTNAG	6 cut(s)	54, 444, 675, 2544, 2661, 2706
HpySE526I	ACGT	6 cut(s)	252, 629, 728, 734, 2023, 2337
Hsp92II	CATG	8 cut(s)	643, 860, 1385, 1526, 1835, 1910, 2270, 2680
HspAI	GCGC	2 cut(s)	489, 718
KpnI	GGTACC	1 cut(s)	1781
Ksp22I	TGATCA	4 cut(s)	423, 642, 2112, 2530
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	1 cut(s)	540
Lsp1109I	GCAGC	2 cut(s)	103, 1189
LweI	GCATC	7 cut(s)	439, 1320, 1612, 2002, 2452, 2456, 2682
MaeI	CTAG	5 cut(s)	494, 552, 783, 1101, 1358
MaeII	ACGT	6 cut(s)	252, 629, 728, 734, 2023, 2337
MaeIII	GTNAC	3 cut(s)	329, 1150, 1360
MbiI	CCGCTC	1 cut(s)	443
MfeI	CAATTG	1 cut(s)	196
MflI	RGATCY	2 cut(s)	157, 408
MhlI	GDGCHC	6 cut(s)	60, 465, 1062, 2247, 2278, 2667
MlyI	GAGTC	2 cut(s)	1979, 2507
MmeI	TCCRAC	3 cut(s)	857, 956, 1104
Mph1103I	ATGCAT	2 cut(s)	1912, 2017
MslI	CAYNNNNRTG	1 cut(s)	2271
MspA1I	CMGCKG	1 cut(s)	116
MspCI	CTTAAG	2 cut(s)	2057, 2633
MspI	CCGG	3 cut(s)	327, 394, 1278
MspR9I	CCNGG	4 cut(s)	327, 395, 1279, 1307
MunI	CAATTG	1 cut(s)	196
Mva1269I	GAATGC	1 cut(s)	1650
MvaI	CCWGG	1 cut(s)	1307
MvnI	CGCG	1 cut(s)	489
MwoI	GCNNNNNNNGC	3 cut(s)	449, 622, 808
NciI	CCSGG	3 cut(s)	327, 395, 1279
NcoI	CCATGG	1 cut(s)	1381
NdeI	CATATG	2 cut(s)	2017, 2361
NlaIII	CATG	8 cut(s)	643, 860, 1385, 1526, 1835, 1910, 2270, 2680
NlaIV	GGNNCC	4 cut(s)	1140, 1455, 1779, 2178
NmeAIII	GCCGAG	1 cut(s)	276
NmuCI	GTSAC	1 cut(s)	1150
NsiI	ATGCAT	2 cut(s)	1912, 2017
NspV	TTCGAA	1 cut(s)	2126
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	1 cut(s)	1670
PctI	GAATGC	1 cut(s)	1650
PfeI	GAWTC	4 cut(s)	748, 1000, 1229, 1535
PkrI	GCNGC	5 cut(s)	115, 118, 810, 1204, 1919
PleI	GAGTC	2 cut(s)	1979, 2506
PpsI	GAGTC	2 cut(s)	1979, 2506
Ppu21I	YACGTR	1 cut(s)	735
PshBI	ATTAAT	3 cut(s)	1376, 2006, 2033
PsiI	TTATAA	1 cut(s)	2400
Psp124BI	GAGCTC	2 cut(s)	2247, 2667
Psp6I	CCWGG	1 cut(s)	1305
PspFI	CCCAGC	1 cut(s)	168
PspGI	CCWGG	1 cut(s)	1305
PspN4I	GGNNCC	4 cut(s)	1140, 1455, 1779, 2178
PspPI	GGNCC	2 cut(s)	2176, 2741
PsuI	RGATCY	2 cut(s)	157, 408
RsaI	GTAC	7 cut(s)	737, 943, 1178, 1676, 1779, 2284, 2569
RsaNI	GTAC	7 cut(s)	736, 942, 1177, 1675, 1778, 2283, 2568
RseI	CAYNNNNRTG	1 cut(s)	2271
SacI	GAGCTC	2 cut(s)	2247, 2667
SapI	GCTCTTC	1 cut(s)	179
SatI	GCNGC	5 cut(s)	114, 117, 809, 1203, 1918
Sau96I	GGNCC	2 cut(s)	2176, 2741
SchI	GAGTC	2 cut(s)	1979, 2507
ScrFI	CCNGG	4 cut(s)	327, 395, 1279, 1307
SduI	GDGCHC	6 cut(s)	60, 465, 1062, 2247, 2278, 2667
SfaNI	GCATC	7 cut(s)	439, 1320, 1612, 2002, 2452, 2456, 2682
SfcI	CTRYAG	1 cut(s)	787
SfuI	TTCGAA	1 cut(s)	2126
SinI	GGWCC	2 cut(s)	2176, 2741
SmiMI	CAYNNNNRTG	1 cut(s)	2271
SmlI	CTYRAG	3 cut(s)	218, 2057, 2633
SmoI	CTYRAG	3 cut(s)	218, 2057, 2633
SnaBI	TACGTA	1 cut(s)	735
SspI	AATATT	2 cut(s)	1042, 2454
SspMI	CTAG	5 cut(s)	494, 552, 783, 1101, 1358
SstI	GAGCTC	2 cut(s)	2247, 2667
StyD4I	CCNGG	4 cut(s)	325, 393, 1277, 1305
StyI	CCWWGG	1 cut(s)	1381
TaiI	ACGT	6 cut(s)	255, 632, 731, 737, 2026, 2340
TauI	GCSGC	3 cut(s)	116, 811, 1920
TfiI	GAWTC	4 cut(s)	748, 1000, 1229, 1535
TscAI	CASTG	7 cut(s)	115, 159, 520, 1323, 1394, 1480, 2392
TseFI	GTSAC	1 cut(s)	1150
TseI	GCWGC	2 cut(s)	116, 1202
Tsp45I	GTSAC	1 cut(s)	1150
TspGWI	ACGGA	1 cut(s)	1034
TspRI	CASTG	7 cut(s)	115, 159, 520, 1323, 1394, 1480, 2392
Vha464I	CTTAAG	2 cut(s)	2057, 2633
VneI	GTGCAC	1 cut(s)	2274
VpaK11BI	GGWCC	2 cut(s)	2176, 2741
VspI	ATTAAT	3 cut(s)	1376, 2006, 2033
XapI	RAATTY	5 cut(s)	414, 467, 497, 619, 2376
XmiI	GTMKAC	1 cut(s)	1302
XspI	CTAG	5 cut(s)	494, 552, 783, 1101, 1358
Zsp2I	ATGCAT	2 cut(s)	1912, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.