Poly(A) polymerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAP_NTPase | PF20750 | 26 - 220 | 2.3e-75 | Poly(A) polymerase nucleotidyltransferase domain |
| NTP_transf_2 | PF01909 | 96 - 175 | 1.9e-08 | Nucleotidyltransferase domain |
| PAP_central | PF04928 | 225 - 369 | 9.1e-69 | Poly(A) polymerase central domain |
| PAP_RNA-bind | PF04926 | 373 - 429 | 5.1e-13 | Poly(A) polymerase predicted RNA binding domain |
| PAP_RNA-bind | PF04926 | 433 - 506 | 9.8e-06 | Poly(A) polymerase predicted RNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1028 |
| Acc36I | ACCTGC | 1 cut(s) | 1685 |
| Acc65I | GGTACC | 1 cut(s) | 1808 |
| AccB1I | GGYRCC | 2 cut(s) | 1808, 2246 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1760 |
| AccI | GTMKAC | 1 cut(s) | 845 |
| AccII | CGCG | 1 cut(s) | 720 |
| AciI | CCGC | 7 cut(s) | 5, 59, 62, 214, 679, 720, 1846 |
| AclI | AACGTT | 1 cut(s) | 1564 |
| AclWI | GGATC | 5 cut(s) | 325, 567, 914, 927, 948 |
| AcoI | YGGCCR | 3 cut(s) | 211, 220, 860 |
| AcsI | RAATTY | 4 cut(s) | 491, 645, 701, 1892 |
| AcuI | CTGAAG | 4 cut(s) | 820, 1097, 1241, 2175 |
| AdeI | CACNNNGTG | 1 cut(s) | 1313 |
| AfaI | GTAC | 6 cut(s) | 873, 1015, 1552, 1810, 1818, 1947 |
| AfeI | AGCGCT | 1 cut(s) | 1096 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1663, 1760, 2184 |
| AflII | CTTAAG | 1 cut(s) | 650 |
| AflIII | ACRYGT | 3 cut(s) | 1021, 1416, 1712 |
| AgsI | TTSAA | 8 cut(s) | 458, 496, 622, 885, 1106, 1228, 1835, 1997 |
| AjnI | CCWGG | 1 cut(s) | 343 |
| AleI | CACNNNNGTG | 1 cut(s) | 691 |
| AluBI | AGCT | 8 cut(s) | 350, 655, 793, 1075, 1219, 1477, 1725, 1877 |
| AluI | AGCT | 8 cut(s) | 350, 655, 793, 1075, 1219, 1477, 1725, 1877 |
| Alw21I | GWGCWC | 2 cut(s) | 675, 1309 |
| Alw26I | GTCTC | 3 cut(s) | 179, 1009, 1233 |
| Alw44I | GTGCAC | 1 cut(s) | 1305 |
| AlwI | GGATC | 5 cut(s) | 325, 567, 914, 927, 948 |
| Aor51HI | AGCGCT | 1 cut(s) | 1096 |
| AoxI | GGCC | 8 cut(s) | 104, 211, 220, 341, 374, 860, 1511, 1622 |
| ApaLI | GTGCAC | 1 cut(s) | 1305 |
| ApeKI | GCWGC | 3 cut(s) | 627, 1160, 1474 |
| ApoI | RAATTY | 4 cut(s) | 491, 645, 701, 1892 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 204, 2173 |
| Asp718I | GGTACC | 1 cut(s) | 1808 |
| AspLEI | GCGC | 2 cut(s) | 720, 1097 |
| AspS9I | GGNCC | 6 cut(s) | 104, 341, 374, 1751, 2052, 2082 |
| AsuC2I | CCSGG | 2 cut(s) | 103, 554 |
| AsuHPI | GGTGA | 4 cut(s) | 116, 253, 457, 1213 |
| AsuII | TTCGAA | 1 cut(s) | 613 |
| AvaII | GGWCC | 3 cut(s) | 1751, 2052, 2082 |
| AxyI | CCTNAGG | 1 cut(s) | 936 |
| BaeGI | GKGCMC | 1 cut(s) | 1309 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1800, 1800, 1833, 1833 |
| BalI | TGGCCA | 2 cut(s) | 222, 862 |
| BamHI | GGATCC | 1 cut(s) | 919 |
| BanI | GGYRCC | 2 cut(s) | 1808, 2246 |
| BbsI | GAAGAC | 2 cut(s) | 27, 1483 |
| Bbv12I | GWGCWC | 2 cut(s) | 675, 1309 |
| BbvI | GCAGC | 3 cut(s) | 614, 1172, 1486 |
| BccI | CCATC | 6 cut(s) | 274, 1272, 1435, 1493, 1820, 1960 |
| BceAI | ACGGC | 2 cut(s) | 91, 1526 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 593, 627 |
| BciT130I | CCWGG | 1 cut(s) | 345 |
| BciVI | GTATCC | 2 cut(s) | 1609, 1687 |
| BclI | TGATCA | 1 cut(s) | 274 |
| BcnI | CCSGG | 2 cut(s) | 103, 554 |
| BcoDI | GTCTC | 3 cut(s) | 179, 1009, 1233 |
| BfaI | CTAG | 5 cut(s) | 813, 993, 1634, 1722, 1899 |
| BfmI | CTRYAG | 4 cut(s) | 268, 628, 1142, 1608 |
| BfoI | RGCGCY | 1 cut(s) | 1098 |
| BfrI | CTTAAG | 1 cut(s) | 650 |
| BfuAI | ACCTGC | 1 cut(s) | 1685 |
| BfuI | GTATCC | 2 cut(s) | 1609, 1687 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 219, 264 |
| BglII | AGATCT | 1 cut(s) | 1700 |
| BisI | GCNGC | 7 cut(s) | 6, 59, 62, 214, 628, 1161, 1475 |
| BlsI | GCNGC | 7 cut(s) | 7, 60, 63, 215, 629, 1162, 1476 |
| BmcAI | AGTACT | 1 cut(s) | 1015 |
| Bme1390I | CCNGG | 3 cut(s) | 103, 345, 554 |
| Bme18I | GGWCC | 3 cut(s) | 1751, 2052, 2082 |
| BmgT120I | GGNCC | 6 cut(s) | 104, 341, 374, 1751, 2052, 2082 |
| BmiI | GGNNCC | 6 cut(s) | 921, 1752, 1810, 2053, 2189, 2248 |
| BmrFI | CCNGG | 3 cut(s) | 103, 345, 554 |
| BmrI | ACTGGG | 2 cut(s) | 247, 476 |
| BmsI | GCATC | 2 cut(s) | 280, 1301 |
| BmuI | ACTGGG | 2 cut(s) | 247, 476 |
| BpiI | GAAGAC | 2 cut(s) | 27, 1483 |
| BpmI | CTGGAG | 2 cut(s) | 366, 1782 |
| Bpu14I | TTCGAA | 1 cut(s) | 613 |
| BpuEI | CTTGAG | 1 cut(s) | 1747 |
| BpuMI | CCSGG | 2 cut(s) | 103, 554 |
| BsaAI | YACGTR | 3 cut(s) | 1022, 1382, 1715 |
| BsaJI | CCNNGG | 5 cut(s) | 65, 748, 1045, 1977, 2085 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1585, 1615 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1663, 1760, 2184 |
| Bse1I | ACTGG | 6 cut(s) | 242, 482, 745, 1087, 1765, 2068 |
| Bse21I | CCTNAGG | 1 cut(s) | 936 |
| Bse3DI | GCAATG | 1 cut(s) | 1854 |
| BseBI | CCWGG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 5 cut(s) | 65, 748, 1045, 1977, 2085 |
| BseGI | GGATG | 7 cut(s) | 295, 423, 1264, 1292, 1446, 1948, 2209 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1663, 1760, 2184 |
| BseMI | GCAATG | 1 cut(s) | 1854 |
| BseMII | CTCAG | 5 cut(s) | 585, 703, 863, 950, 1020 |
| BseNI | ACTGG | 6 cut(s) | 242, 482, 745, 1087, 1765, 2068 |
| BseRI | GAGGAG | 3 cut(s) | 197, 410, 1079 |
| BseSI | GKGCMC | 1 cut(s) | 1309 |
| BseX3I | CGGCCG | 1 cut(s) | 211 |
| BseXI | GCAGC | 3 cut(s) | 614, 1172, 1486 |
| Bsh1236I | CGCG | 1 cut(s) | 720 |
| Bsh1285I | CGRYCG | 1 cut(s) | 214 |
| BshFI | GGCC | 8 cut(s) | 106, 213, 222, 343, 376, 862, 1513, 1624 |
| BshNI | GGYRCC | 2 cut(s) | 1808, 2246 |
| BsiEI | CGRYCG | 1 cut(s) | 214 |
| BsiHKAI | GWGCWC | 2 cut(s) | 675, 1309 |
| BsiSI | CCGG | 3 cut(s) | 102, 554, 1468 |
| BslFI | GGGAC | 5 cut(s) | 464, 536, 2021, 2065, 2159 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1663, 1760, 2184 |
| BsmAI | GTCTC | 3 cut(s) | 179, 1009, 1233 |
| BsmFI | GGGAC | 5 cut(s) | 464, 536, 2021, 2065, 2159 |
| BsmI | GAATGC | 1 cut(s) | 1257 |
| BsnI | GGCC | 8 cut(s) | 106, 213, 222, 343, 376, 862, 1513, 1624 |
| Bsp119I | TTCGAA | 1 cut(s) | 613 |
| Bsp1286I | GDGCHC | 2 cut(s) | 675, 1309 |
| Bsp143I | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| Bsp19I | CCATGG | 1 cut(s) | 1045 |
| BspACI | CCGC | 7 cut(s) | 5, 59, 62, 214, 679, 720, 1846 |
| BspANI | GGCC | 8 cut(s) | 106, 213, 222, 343, 376, 862, 1513, 1624 |
| BspCNI | CTCAG | 6 cut(s) | 4, 584, 702, 862, 949, 1019 |
| BspFNI | CGCG | 1 cut(s) | 720 |
| BspHI | TCATGA | 1 cut(s) | 486 |
| BspLI | GGNNCC | 6 cut(s) | 921, 1752, 1810, 2053, 2189, 2248 |
| BspMAI | CTGCAG | 1 cut(s) | 632 |
| BspMI | ACCTGC | 1 cut(s) | 1685 |
| BspPI | GGATC | 5 cut(s) | 325, 567, 914, 927, 948 |
| BspT104I | TTCGAA | 1 cut(s) | 613 |
| BspT107I | GGYRCC | 2 cut(s) | 1808, 2246 |
| BspTI | CTTAAG | 1 cut(s) | 650 |
| BsrDI | GCAATG | 1 cut(s) | 1854 |
| BsrI | ACTGG | 6 cut(s) | 242, 482, 745, 1087, 1765, 2068 |
| BssECI | CCNNGG | 5 cut(s) | 65, 748, 1045, 1977, 2085 |
| BssMI | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| BssNAI | GTATAC | 1 cut(s) | 846 |
| BssT1I | CCWWGG | 3 cut(s) | 748, 1045, 1977 |
| Bst1107I | GTATAC | 1 cut(s) | 846 |
| Bst2UI | CCWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 3 cut(s) | 272, 610, 1390 |
| Bst6I | CTCTTC | 3 cut(s) | 195, 435, 885 |
| BstAFI | CTTAAG | 1 cut(s) | 650 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1313 |
| BstBAI | YACGTR | 3 cut(s) | 1022, 1382, 1715 |
| BstBI | TTCGAA | 1 cut(s) | 613 |
| BstC8I | GCNNGC | 2 cut(s) | 532, 1538 |
| BstDEI | CTNAG | 8 cut(s) | 12, 571, 689, 772, 849, 936, 1006, 1211 |
| BstDSI | CCRYGG | 1 cut(s) | 1045 |
| BstEII | GGTNACC | 1 cut(s) | 906 |
| BstF5I | GGATG | 7 cut(s) | 295, 423, 1264, 1292, 1446, 1948, 2209 |
| BstFNI | CGCG | 1 cut(s) | 720 |
| BstH2I | RGCGCY | 1 cut(s) | 1098 |
| BstHHI | GCGC | 2 cut(s) | 720, 1097 |
| BstKTI | GATC | 9 cut(s) | 121, 277, 320, 520, 562, 643, 922, 943, 1703 |
| BstMAI | GTCTC | 3 cut(s) | 179, 1009, 1233 |
| BstMBI | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| BstMCI | CGRYCG | 1 cut(s) | 214 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 219, 264, 717, 1092, 1313, 1883 |
| BstNI | CCWGG | 1 cut(s) | 345 |
| BstNSI | RCATGY | 2 cut(s) | 1420, 1989 |
| BstPI | GGTNACC | 1 cut(s) | 906 |
| BstSCI | CCNGG | 3 cut(s) | 101, 343, 552 |
| BstSFI | CTRYAG | 4 cut(s) | 268, 628, 1142, 1608 |
| BstSLI | GKGCMC | 1 cut(s) | 1309 |
| BstUI | CGCG | 1 cut(s) | 720 |
| BstV1I | GCAGC | 3 cut(s) | 614, 1172, 1486 |
| BstV2I | GAAGAC | 2 cut(s) | 27, 1483 |
| BstX2I | RGATCY | 3 cut(s) | 559, 919, 1700 |
| BstYI | RGATCY | 3 cut(s) | 559, 919, 1700 |
| BstZ17I | GTATAC | 1 cut(s) | 846 |
| BstZI | CGGCCG | 1 cut(s) | 211 |
| Bsu36I | CCTNAGG | 1 cut(s) | 936 |
| BsuI | GTATCC | 2 cut(s) | 1609, 1687 |
| BsuRI | GGCC | 8 cut(s) | 106, 213, 222, 343, 376, 862, 1513, 1624 |
| BtgI | CCRYGG | 1 cut(s) | 1045 |
| BtsCI | GGATG | 7 cut(s) | 295, 423, 1264, 1292, 1446, 1948, 2209 |
| BtsIMutI | CAGTG | 4 cut(s) | 277, 857, 1094, 1265 |
| BveI | ACCTGC | 1 cut(s) | 1685 |
| Cac8I | GCNNGC | 2 cut(s) | 532, 1538 |
| CciI | TCATGA | 1 cut(s) | 486 |
| CfoI | GCGC | 2 cut(s) | 720, 1097 |
| Cfr13I | GGNCC | 6 cut(s) | 104, 341, 374, 1751, 2052, 2082 |
| CseI | GACGC | 1 cut(s) | 1298 |
| Csp6I | GTAC | 6 cut(s) | 872, 1014, 1551, 1809, 1817, 1946 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1765, 1800 |
| CviQI | GTAC | 6 cut(s) | 872, 1014, 1551, 1809, 1817, 1946 |
| DdeI | CTNAG | 8 cut(s) | 12, 571, 689, 772, 849, 936, 1006, 1211 |
| DpnI | GATC | 9 cut(s) | 120, 276, 319, 519, 561, 642, 921, 942, 1702 |
| DpnII | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| DraI | TTTAAA | 1 cut(s) | 699 |
| DraIII | CACNNNGTG | 1 cut(s) | 1313 |
| EaeI | YGGCCR | 3 cut(s) | 211, 220, 860 |
| EagI | CGGCCG | 1 cut(s) | 211 |
| Eam1104I | CTCTTC | 3 cut(s) | 195, 435, 885 |
| EarI | CTCTTC | 3 cut(s) | 195, 435, 885 |
| EclXI | CGGCCG | 1 cut(s) | 211 |
| Eco130I | CCWWGG | 3 cut(s) | 748, 1045, 1977 |
| Eco47I | GGWCC | 3 cut(s) | 1751, 2052, 2082 |
| Eco47III | AGCGCT | 1 cut(s) | 1096 |
| Eco52I | CGGCCG | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 4 cut(s) | 820, 1097, 1241, 2175 |
| Eco81I | CCTNAGG | 1 cut(s) | 936 |
| Eco91I | GGTNACC | 1 cut(s) | 906 |
| EcoO65I | GGTNACC | 1 cut(s) | 906 |
| EcoRI | GAATTC | 1 cut(s) | 1892 |
| EcoRII | CCWGG | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 3 cut(s) | 748, 1045, 1977 |
| ErhI | CCWWGG | 3 cut(s) | 748, 1045, 1977 |
| FaqI | GGGAC | 5 cut(s) | 464, 536, 2021, 2065, 2159 |
| FauI | CCCGC | 1 cut(s) | 1839 |
| FauNDI | CATATG | 2 cut(s) | 382, 954 |
| FbaI | TGATCA | 1 cut(s) | 274 |
| FblI | GTMKAC | 1 cut(s) | 845 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 59, 62, 214, 628, 1161, 1475 |
| FokI | GGATG | 7 cut(s) | 302, 410, 1251, 1279, 1453, 1935, 2216 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 59, 62, 214, 628, 1161, 1475 |
| FspBI | CTAG | 5 cut(s) | 813, 993, 1634, 1722, 1899 |
| GlaI | GCGC | 2 cut(s) | 719, 1096 |
| GluI | GCNGC | 7 cut(s) | 6, 59, 62, 214, 628, 1161, 1475 |
| GsuI | CTGGAG | 2 cut(s) | 366, 1782 |
| HaeII | RGCGCY | 1 cut(s) | 1098 |
| HaeIII | GGCC | 8 cut(s) | 106, 213, 222, 343, 376, 862, 1513, 1624 |
| HapII | CCGG | 3 cut(s) | 102, 554, 1468 |
| HgaI | GACGC | 1 cut(s) | 1298 |
| HhaI | GCGC | 2 cut(s) | 720, 1097 |
| Hin6I | GCGC | 2 cut(s) | 718, 1095 |
| HinP1I | GCGC | 2 cut(s) | 718, 1095 |
| HincII | GTYRAC | 3 cut(s) | 598, 1872, 2104 |
| HindII | GTYRAC | 3 cut(s) | 598, 1872, 2104 |
| HindIII | AAGCTT | 1 cut(s) | 653 |
| HpaII | CCGG | 3 cut(s) | 102, 554, 1468 |
| HphI | GGTGA | 4 cut(s) | 116, 253, 457, 1213 |
| Hpy166II | GTNNAC | 9 cut(s) | 598, 846, 1307, 1414, 1754, 1787, 1872, 2035, 2104 |
| Hpy8I | GTNNAC | 9 cut(s) | 598, 846, 1307, 1414, 1754, 1787, 1872, 2035, 2104 |
| HpyAV | CCTTC | 7 cut(s) | 1183, 1337, 1355, 1491, 1541, 1932, 2150 |
| HpyCH4III | ACNGT | 3 cut(s) | 272, 610, 1390 |
| HpyCH4IV | ACGT | 5 cut(s) | 1021, 1381, 1564, 1585, 1714 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 219, 264, 717, 1092, 1313, 1883 |
| HpyF3I | CTNAG | 8 cut(s) | 12, 571, 689, 772, 849, 936, 1006, 1211 |
| HpySE526I | ACGT | 5 cut(s) | 1021, 1381, 1564, 1585, 1714 |
| HspAI | GCGC | 2 cut(s) | 718, 1095 |
| KpnI | GGTACC | 1 cut(s) | 1812 |
| Ksp22I | TGATCA | 1 cut(s) | 274 |
| Kzo9I | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| LmnI | GCTCC | 2 cut(s) | 347, 1092 |
| Lsp1109I | GCAGC | 3 cut(s) | 614, 1172, 1486 |
| LweI | GCATC | 2 cut(s) | 280, 1301 |
| MaeI | CTAG | 5 cut(s) | 813, 993, 1634, 1722, 1899 |
| MaeII | ACGT | 5 cut(s) | 1021, 1381, 1564, 1585, 1714 |
| MaeIII | GTNAC | 4 cut(s) | 445, 736, 906, 995 |
| MalI | GATC | 9 cut(s) | 120, 276, 319, 519, 561, 642, 921, 942, 1702 |
| MboI | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| MfeI | CAATTG | 4 cut(s) | 248, 513, 1790, 2194 |
| MflI | RGATCY | 3 cut(s) | 559, 919, 1700 |
| MhlI | GDGCHC | 2 cut(s) | 675, 1309 |
| MlsI | TGGCCA | 2 cut(s) | 222, 862 |
| MluNI | TGGCCA | 2 cut(s) | 222, 862 |
| MlyI | GAGTC | 4 cut(s) | 25, 1679, 1859, 1877 |
| MmeI | TCCRAC | 1 cut(s) | 1996 |
| Mox20I | TGGCCA | 2 cut(s) | 222, 862 |
| MroXI | GAANNNNTTC | 2 cut(s) | 204, 2173 |
| MscI | TGGCCA | 2 cut(s) | 222, 862 |
| MseI | TTAA | 2 cut(s) | 651, 698 |
| MslI | CAYNNNNRTG | 2 cut(s) | 129, 691 |
| Msp20I | TGGCCA | 2 cut(s) | 222, 862 |
| MspCI | CTTAAG | 1 cut(s) | 650 |
| MspI | CCGG | 3 cut(s) | 102, 554, 1468 |
| MspR9I | CCNGG | 3 cut(s) | 103, 345, 554 |
| MunI | CAATTG | 4 cut(s) | 248, 513, 1790, 2194 |
| Mva1269I | GAATGC | 1 cut(s) | 1257 |
| MvaI | CCWGG | 1 cut(s) | 345 |
| MvnI | CGCG | 1 cut(s) | 720 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 219, 264, 717, 1092, 1313, 1883 |
| NciI | CCSGG | 2 cut(s) | 103, 554 |
| NcoI | CCATGG | 1 cut(s) | 1045 |
| NdeI | CATATG | 2 cut(s) | 382, 954 |
| NdeII | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| NlaIV | GGNNCC | 6 cut(s) | 921, 1752, 1810, 2053, 2189, 2248 |
| NmeAIII | GCCGAG | 2 cut(s) | 90, 189 |
| NmuCI | GTSAC | 1 cut(s) | 445 |
| NspI | RCATGY | 2 cut(s) | 1420, 1989 |
| NspV | TTCGAA | 1 cut(s) | 613 |
| OliI | CACNNNNGTG | 1 cut(s) | 691 |
| PagI | TCATGA | 1 cut(s) | 486 |
| PciI | ACATGT | 1 cut(s) | 1416 |
| PctI | GAATGC | 1 cut(s) | 1257 |
| PdmI | GAANNNNTTC | 2 cut(s) | 204, 2173 |
| PfeI | GAWTC | 8 cut(s) | 78, 158, 388, 578, 744, 831, 1202, 1973 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1760 |
| PfoI | TCCNGGA | 1 cut(s) | 552 |
| PkrI | GCNGC | 7 cut(s) | 7, 60, 63, 215, 629, 1162, 1476 |
| PleI | GAGTC | 4 cut(s) | 24, 1678, 1858, 1876 |
| PpsI | GAGTC | 4 cut(s) | 24, 1678, 1858, 1876 |
| Ppu21I | YACGTR | 3 cut(s) | 1022, 1382, 1715 |
| PscI | ACATGT | 1 cut(s) | 1416 |
| PsiI | TTATAA | 1 cut(s) | 1028 |
| Psp1406I | AACGTT | 1 cut(s) | 1564 |
| Psp6I | CCWGG | 1 cut(s) | 343 |
| PspEI | GGTNACC | 1 cut(s) | 906 |
| PspGI | CCWGG | 1 cut(s) | 343 |
| PspN4I | GGNNCC | 6 cut(s) | 921, 1752, 1810, 2053, 2189, 2248 |
| PspPI | GGNCC | 6 cut(s) | 104, 341, 374, 1751, 2052, 2082 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 891, 923, 980, 1012, 1702, 1734 |
| PstI | CTGCAG | 1 cut(s) | 632 |
| PsuI | RGATCY | 3 cut(s) | 559, 919, 1700 |
| RsaI | GTAC | 6 cut(s) | 873, 1015, 1552, 1810, 1818, 1947 |
| RsaNI | GTAC | 6 cut(s) | 872, 1014, 1551, 1809, 1817, 1946 |
| RseI | CAYNNNNRTG | 2 cut(s) | 129, 691 |
| SaqAI | TTAA | 2 cut(s) | 651, 698 |
| SatI | GCNGC | 7 cut(s) | 6, 59, 62, 214, 628, 1161, 1475 |
| Sau3AI | GATC | 9 cut(s) | 118, 274, 317, 517, 559, 640, 919, 940, 1700 |
| Sau96I | GGNCC | 6 cut(s) | 104, 341, 374, 1751, 2052, 2082 |
| ScaI | AGTACT | 1 cut(s) | 1015 |
| SchI | GAGTC | 4 cut(s) | 25, 1679, 1859, 1877 |
| ScrFI | CCNGG | 3 cut(s) | 103, 345, 554 |
| SduI | GDGCHC | 2 cut(s) | 675, 1309 |
| SfaNI | GCATC | 2 cut(s) | 280, 1301 |
| SfcI | CTRYAG | 4 cut(s) | 268, 628, 1142, 1608 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 219 |
| SfuI | TTCGAA | 1 cut(s) | 613 |
| SinI | GGWCC | 3 cut(s) | 1751, 2052, 2082 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 129, 691 |
| SmlI | CTYRAG | 2 cut(s) | 650, 1726 |
| SmoI | CTYRAG | 2 cut(s) | 650, 1726 |
| SsiI | CCGC | 7 cut(s) | 5, 59, 62, 214, 679, 720, 1846 |
| SspMI | CTAG | 5 cut(s) | 813, 993, 1634, 1722, 1899 |
| StyD4I | CCNGG | 3 cut(s) | 101, 343, 552 |
| StyI | CCWWGG | 3 cut(s) | 748, 1045, 1977 |
| TaaI | ACNGT | 3 cut(s) | 272, 610, 1390 |
| TaiI | ACGT | 5 cut(s) | 1024, 1384, 1567, 1588, 1717 |
| TaqI | TCGA | 8 cut(s) | 135, 141, 325, 391, 613, 829, 1122, 1516 |
| TaqII | GACCGA | 1 cut(s) | 2099 |
| TatI | WGTACW | 2 cut(s) | 871, 1013 |
| TauI | GCSGC | 4 cut(s) | 8, 61, 64, 216 |
| TfiI | GAWTC | 8 cut(s) | 78, 158, 388, 578, 744, 831, 1202, 1973 |
| Tru1I | TTAA | 2 cut(s) | 651, 698 |
| Tru9I | TTAA | 2 cut(s) | 651, 698 |
| TscAI | CASTG | 4 cut(s) | 277, 857, 1094, 1265 |
| TseFI | GTSAC | 1 cut(s) | 445 |
| TseI | GCWGC | 3 cut(s) | 627, 1160, 1474 |
| Tsp45I | GTSAC | 1 cut(s) | 445 |
| TspGWI | ACGGA | 1 cut(s) | 90 |
| TspRI | CASTG | 4 cut(s) | 277, 857, 1094, 1265 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1760 |
| Vha464I | CTTAAG | 1 cut(s) | 650 |
| VneI | GTGCAC | 1 cut(s) | 1305 |
| VpaK11BI | GGWCC | 3 cut(s) | 1751, 2052, 2082 |
| XapI | RAATTY | 4 cut(s) | 491, 645, 701, 1892 |
| XceI | RCATGY | 2 cut(s) | 1420, 1989 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1819 |
| XmiI | GTMKAC | 1 cut(s) | 845 |
| XmnI | GAANNNNTTC | 2 cut(s) | 204, 2173 |
| XspI | CTAG | 5 cut(s) | 813, 993, 1634, 1722, 1899 |
| ZrmI | AGTACT | 1 cut(s) | 1015 |