Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0000312

Physical Location & Seq

Genomic Coordinates Forward (+)

7432562 .. 7437503

Gene Structure 4942 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g09190.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGCGGGTTCTGAGGATCCAGTGGCCTCTTCCCCGGCTGAGCAGCCGCCAAAGCACTACGGCACCACCAAGCCAATCTTCCTTTCCGGTCCTACCGAGTATGATCTTCAACGAAATGTCGAACTCGAAAAGTACTTGATTGATTCGGAACTTTACGAGAGCAAAGATGAGGCTGCGAAAAGAGAAGAGGTTCTTGGCCGCATTGATCAGGTTCATGGGCCAGGAGCTGACATAGACACTTTGTGTGTTGGGCCATCATATGTGAATCGAGAGGAAGATTTCTTTATTACATTGCATGATATCCTTGCTGAATTGGAAGAGGTTACTGAACTTCAACCAGTTCCTGATGCTCATGTCCCCGTCATGAAATTCAAGTTCCAGGGAATATCAATAGATCTTTTGTATGCAAGCATCTCTTTTTTGGTTGTTCCAGAAGATCTAGACATCTCACATGGATCTGTGCTATATGATGTTGATGAGCAAACTGTTCGAAGTCTGAACGGCTGCAGGGTTGCAGATCAAATTCTTAAACTTGTCCCCAATGTTGAGCACTTCCGGACGACACTCAGATGTTTGAAGTTTTGGGCTAAAAGACGTGGTGTTTATTCAAATGTTACTGGATTCCTTGGTGGTGTAAATTGGGCTATCTTAGTTGCTCGGATATGCCAGCTTTATCCCAATGCAATTCCTAGCATGTTGGTTTCCAAATTTTTCAGAGTGTATACTCAGTGGCGTTGGCCAAATCCTGTAATTTTATGTTCAATTGAAGAGAATGAACTAGGGTTCCCTACATGGGACCCTCGTCGAAACCCTCGGGACCGCCTTCATCATATGCCAATAATAACTCCTGCATACCCTTGCATGAACTCTAGTTACAATGTCTCAGTAAGTACTCTACGTGTTATGGCAGAGCAGTTCGACCATGGTAATAGGATATGTGAGGAGATTGAGCTGAATAAGGCCCAGTGGAGTGCTCTCTTTGAACCTTATCTCTTCTTTGAGGCGTACAAAAATTATCTACAAGTCGACATAGTTGCAGCTGATGTTGATGACTTGCTGACGTGGAAGGGATGGGTGGAATCCAGGTTTAGACAGCTTACCCTGAAGATAGAGCGAGACACGAAAGGGATGCTGCAGTGCCATCCATATCCTAAGGAATATGTCGATCTATCCAAGCCATGCCCACACTGTGCTTTCTTTATGGGTTTGCAGAGGAAAGAGGGAGTGAGAGGTAAAGAAGGTCAGCAATTTGATATACGTGGAACAGTCGATGAGTTCAGGGAAGGAATAAACATGTACATGTTCTGGAAACCCGGGATGGATATATATGTTTCTCATGTTCGCCGGAAGCAGCTTCCTCCCTTTGTTTTCCCCAATGGGTGTAAGCGGCCTCGATTATCAAGGCATGTAAGTCAGCAGGACGAAAGAACTTATGAAGATTCTGCAGGTTGTAGTTCTGGGTCTGCGGAAAGACATACCAGGAGGAAAATTGATCATAAAACAGAGGATGTGAGGGCAATCAAACTCGAGAAGCAGACGTCTGTTAGTTCACAATTGATGGAGTCTGTGGCCCCAGAAAGTAGTACAGGTGGAGCACCTGATACCAGCTTCAGTAACAGCATTAGGTTAGAGTGTCTGGCAACTGGAGATGCAGAAAAGAAATCTGATAGTAGATTGCCTGTTGGACAGTTAGAGAGGGAAAGGGGAAGTGTTGGAGACGTGAGAACGGTTGATAATGTTGTGCACGAATCCAATACTACAAATGAGTGCACATCTGTGCATGTTCCTGAATTTCCCAAAGTCAGAAATGAGGTCAAGCCTTCGCAAGAGGATTATGAGGTAAAACCATCTGAACAGTTGGAGAAACCTCTTTCCTGGAAGGAGCTGAATATGGAGGCTGACTCTACTGGAAGACTGCTGAATTGGACAGCAGATGCTATTGATGGTGACCAAGAACTAGTCAAACCATGTAGTCGGAAGATGGGGGTGGAGAATGCTGAATGTGCATTGGGGTCACTTCTATCACTCAAACTCAATTGTGAAGCGAGTTACTTGATTTGTGAACTCTGGATTAGGAATTGTACCAGATGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0070566 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

699

Amino Acids

79.61

Weight (kDa)

5.51

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca	FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica	MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica	Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis	pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis	RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata	RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora	Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii	Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa	Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha	Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana	Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1541
Acc36I	ACCTGC	1 cut(s)	1436
AccB1I	GGYRCC	1 cut(s)	62
AccI	GTMKAC	2 cut(s)	722, 1026
AccIII	TCCGGA	1 cut(s)	555
AciI	CCGC	6 cut(s)	5, 47, 199, 820, 1387, 1466
AclWI	GGATC	3 cut(s)	11, 24, 463
AcoI	YGGCCR	2 cut(s)	196, 737
AcsI	RAATTY	4 cut(s)	368, 522, 707, 1790
AcuI	CTGAAG	2 cut(s)	1124, 1594
AcyI	GRCGYC	1 cut(s)	1538
AdeI	CACNNNGTG	2 cut(s)	243, 1190
AfaI	GTAC	6 cut(s)	134, 892, 1007, 1298, 1585, 2083
AfiI	CCNNNNNNNGG	1 cut(s)	793
AflIII	ACRYGT	3 cut(s)	898, 1293, 1299
AgsI	TTSAA	8 cut(s)	110, 335, 373, 577, 609, 762, 767, 983
AhlI	ACTAGT	1 cut(s)	1957
AjiI	CACGTC	3 cut(s)	596, 1062, 1720
AjnI	CCWGG	5 cut(s)	220, 378, 1082, 1478, 1874
AjuI	GAANNNNNNNTTGG	6 cut(s)	62, 67, 94, 99, 177, 209
AleI	CACNNNNGTG	1 cut(s)	1775
AloI	GAACNNNNNNTCC	2 cut(s)	768, 800
AluBI	AGCT	8 cut(s)	227, 670, 952, 1040, 1096, 1354, 1608, 1885
AluI	AGCT	8 cut(s)	227, 670, 952, 1040, 1096, 1354, 1608, 1885
Alw21I	GWGCWC	5 cut(s)	552, 976, 1597, 1746, 1772
Alw26I	GTCTC	3 cut(s)	886, 1110, 1710
Alw44I	GTGCAC	2 cut(s)	1742, 1768
AlwI	GGATC	3 cut(s)	11, 24, 463
AlwNI	CAGNNNCTG	2 cut(s)	227, 344
Ama87I	CYCGRG	3 cut(s)	813, 1313, 1526
Aor13HI	TCCGGA	1 cut(s)	555
AoxI	GGCC	8 cut(s)	24, 196, 218, 251, 737, 960, 1388, 1569
ApaLI	GTGCAC	2 cut(s)	1742, 1768
ApeKI	GCWGC	6 cut(s)	43, 173, 504, 1037, 1132, 1351
ApoI	RAATTY	4 cut(s)	368, 522, 707, 1790
Asp700I	GAANNNNTTC	1 cut(s)	189
AspS9I	GGNCC	7 cut(s)	89, 218, 251, 796, 817, 961, 1570
AsuC2I	CCSGG	3 cut(s)	35, 1314, 1315
AsuHPI	GGTGA	1 cut(s)	1958
AsuII	TTCGAA	1 cut(s)	490
AvaI	CYCGRG	3 cut(s)	813, 1313, 1526
AvaII	GGWCC	3 cut(s)	89, 796, 817
AxyI	CCTNAGG	1 cut(s)	1152
BaeGI	GKGCMC	2 cut(s)	1746, 1772
BalI	TGGCCA	1 cut(s)	739
BamHI	GGATCC	1 cut(s)	16
BanI	GGYRCC	1 cut(s)	62
BbsI	GAAGAC	1 cut(s)	1918
Bbv12I	GWGCWC	5 cut(s)	552, 976, 1597, 1746, 1772
BbvI	GCAGC	6 cut(s)	55, 160, 491, 1049, 1119, 1363
BccI	CCATC	9 cut(s)	262, 1065, 1149, 1312, 1552, 1855, 1937, 1975, 2082
BceAI	ACGGC	2 cut(s)	76, 517
BcgI	CGANNNNNNTGC	6 cut(s)	470, 504, 1016, 1050, 1111, 1145
BciT130I	CCWGG	5 cut(s)	222, 380, 1084, 1480, 1876
BclI	TGATCA	2 cut(s)	205, 1492
BcnI	CCSGG	3 cut(s)	35, 1314, 1315
BcoDI	GTCTC	3 cut(s)	886, 1110, 1710
BcuI	ACTAGT	1 cut(s)	1957
BfaI	CTAG	5 cut(s)	440, 690, 779, 870, 1958
BfmI	CTRYAG	3 cut(s)	505, 1133, 1443
BfuAI	ACCTGC	1 cut(s)	1436
BglII	AGATCT	2 cut(s)	394, 436
BisI	GCNGC	9 cut(s)	44, 47, 174, 199, 505, 1038, 1133, 1352, 1388
BlpI	GCTNAGC	1 cut(s)	39
BlsI	GCNGC	9 cut(s)	45, 48, 175, 200, 506, 1039, 1134, 1353, 1389
BmcAI	AGTACT	2 cut(s)	134, 892
Bme1390I	CCNGG	8 cut(s)	35, 222, 380, 1084, 1314, 1315, 1480, 1876
Bme18I	GGWCC	3 cut(s)	89, 796, 817
BmeT110I	CYCGRG	3 cut(s)	813, 1313, 1526
BmgBI	CACGTC	3 cut(s)	596, 1062, 1720
BmgT120I	GGNCC	7 cut(s)	89, 218, 251, 796, 817, 961, 1570
BmiI	GGNNCC	7 cut(s)	18, 64, 785, 797, 798, 818, 1572
BmrFI	CCNGG	8 cut(s)	35, 222, 380, 1084, 1314, 1315, 1480, 1876
BmrI	ACTGGG	1 cut(s)	958
BmsI	GCATC	5 cut(s)	337, 420, 1119, 1639, 1924
BmuI	ACTGGG	1 cut(s)	958
BoxI	GACNNNNGTC	1 cut(s)	801
BpiI	GAAGAC	1 cut(s)	1918
BplI	GAGNNNNNCTC	2 cut(s)	1886, 1918
BpmI	CTGGAG	1 cut(s)	1665
Bpu1102I	GCTNAGC	1 cut(s)	39
Bpu14I	TTCGAA	1 cut(s)	490
BpuMI	CCSGG	3 cut(s)	35, 1314, 1315
BsaAI	YACGTR	2 cut(s)	899, 1259
BsaHI	GRCGYC	1 cut(s)	1538
BsaJI	CCNNGG	6 cut(s)	33, 379, 625, 812, 922, 1313
BsaWI	WCCGGW	2 cut(s)	86, 555
Bsc4I	CCNNNNNNNGG	1 cut(s)	793
Bse1I	ACTGG	6 cut(s)	20, 338, 622, 964, 1648, 1912
Bse21I	CCTNAGG	1 cut(s)	1152
Bse3DI	GCAATG	1 cut(s)	290
BseAI	TCCGGA	1 cut(s)	555
BseBI	CCWGG	5 cut(s)	222, 380, 1084, 1480, 1876
BseDI	CCNNGG	6 cut(s)	33, 379, 625, 812, 922, 1313
BseGI	GGATG	5 cut(s)	1076, 1134, 1141, 1323, 1513
BseLI	CCNNNNNNNGG	1 cut(s)	793
BseMI	GCAATG	1 cut(s)	290
BseMII	CTCAG	4 cut(s)	30, 580, 740, 897
BseNI	ACTGG	6 cut(s)	20, 338, 622, 964, 1648, 1912
BseRI	GAGGAG	1 cut(s)	956
BseSI	GKGCMC	2 cut(s)	1746, 1772
BseXI	GCAGC	6 cut(s)	55, 160, 491, 1049, 1119, 1363
BshFI	GGCC	8 cut(s)	26, 198, 220, 253, 739, 962, 1390, 1571
BshNI	GGYRCC	1 cut(s)	62
BsiHKAI	GWGCWC	5 cut(s)	552, 976, 1597, 1746, 1772
BsiHKCI	CYCGRG	3 cut(s)	813, 1313, 1526
BsiSI	CCGG	5 cut(s)	35, 87, 556, 1314, 1345
BslFI	GGGAC	4 cut(s)	341, 521, 809, 830
BslI	CCNNNNNNNGG	1 cut(s)	793
BsmAI	GTCTC	3 cut(s)	886, 1110, 1710
BsmBI	CGTCTC	1 cut(s)	1710
BsmFI	GGGAC	4 cut(s)	341, 521, 809, 830
BsmI	GAATGC	1 cut(s)	1999
BsnI	GGCC	8 cut(s)	26, 198, 220, 253, 739, 962, 1390, 1571
BsoBI	CYCGRG	3 cut(s)	813, 1313, 1526
Bsp119I	TTCGAA	1 cut(s)	490
Bsp1286I	GDGCHC	5 cut(s)	552, 976, 1597, 1746, 1772
Bsp13I	TCCGGA	1 cut(s)	555
Bsp1407I	TGTACA	1 cut(s)	1296
Bsp143I	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
Bsp1720I	GCTNAGC	1 cut(s)	39
Bsp19I	CCATGG	1 cut(s)	922
BspACI	CCGC	6 cut(s)	5, 47, 199, 820, 1387, 1466
BspANI	GGCC	8 cut(s)	26, 198, 220, 253, 739, 962, 1390, 1571
BspCNI	CTCAG	5 cut(s)	4, 31, 579, 739, 896
BspEI	TCCGGA	1 cut(s)	555
BspHI	TCATGA	1 cut(s)	363
BspLI	GGNNCC	7 cut(s)	18, 64, 785, 797, 798, 818, 1572
BspMAI	CTGCAG	3 cut(s)	509, 1137, 1447
BspMI	ACCTGC	1 cut(s)	1436
BspPI	GGATC	3 cut(s)	11, 24, 463
BspT104I	TTCGAA	1 cut(s)	490
BspT107I	GGYRCC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	290
BsrGI	TGTACA	1 cut(s)	1296
BsrI	ACTGG	6 cut(s)	20, 338, 622, 964, 1648, 1912
BssECI	CCNNGG	6 cut(s)	33, 379, 625, 812, 922, 1313
BssMI	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
BssNAI	GTATAC	1 cut(s)	723
BssNI	GRCGYC	1 cut(s)	1538
BssT1I	CCWWGG	2 cut(s)	625, 922
Bst1107I	GTATAC	1 cut(s)	723
Bst2UI	CCWGG	5 cut(s)	222, 380, 1084, 1480, 1876
Bst4CI	ACNGT	6 cut(s)	487, 1190, 1267, 1689, 1729, 1857
Bst6I	CTCTTC	5 cut(s)	34, 180, 312, 762, 998
BstACI	GRCGYC	1 cut(s)	1538
BstAUI	TGTACA	1 cut(s)	1296
BstBAI	YACGTR	2 cut(s)	899, 1259
BstBI	TTCGAA	1 cut(s)	490
BstC8I	GCNNGC	2 cut(s)	409, 668
BstDEI	CTNAG	7 cut(s)	12, 39, 566, 649, 726, 883, 1152
BstDSI	CCRYGG	1 cut(s)	922
BstEII	GGTNACC	1 cut(s)	1946
BstF5I	GGATG	5 cut(s)	1076, 1134, 1141, 1323, 1513
BstKTI	GATC	9 cut(s)	19, 106, 208, 397, 439, 458, 520, 1168, 1495
BstMAI	GTCTC	3 cut(s)	886, 1110, 1710
BstMBI	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
BstMWI	GCNNNNNNNGC	2 cut(s)	52, 2003
BstNI	CCWGG	5 cut(s)	222, 380, 1084, 1480, 1876
BstNSI	RCATGY	5 cut(s)	697, 1297, 1303, 1409, 1784
BstPAI	GACNNNNGTC	1 cut(s)	801
BstPI	GGTNACC	1 cut(s)	1946
BstSCI	CCNGG	8 cut(s)	33, 220, 378, 1082, 1312, 1313, 1478, 1874
BstSFI	CTRYAG	3 cut(s)	505, 1133, 1443
BstSLI	GKGCMC	2 cut(s)	1746, 1772
BstV1I	GCAGC	6 cut(s)	55, 160, 491, 1049, 1119, 1363
BstV2I	GAAGAC	1 cut(s)	1918
BstX2I	RGATCY	4 cut(s)	16, 394, 436, 455
BstYI	RGATCY	4 cut(s)	16, 394, 436, 455
BstZ17I	GTATAC	1 cut(s)	723
Bsu36I	CCTNAGG	1 cut(s)	1152
BsuRI	GGCC	8 cut(s)	26, 198, 220, 253, 739, 962, 1390, 1571
BtgI	CCRYGG	1 cut(s)	922
BtrI	CACGTC	3 cut(s)	596, 1062, 1720
BtsCI	GGATG	5 cut(s)	1076, 1134, 1141, 1323, 1513
BtsI	GCAGTG	1 cut(s)	1142
BtsIMutI	CAGTG	5 cut(s)	27, 734, 971, 1142, 1186
BveI	ACCTGC	1 cut(s)	1436
Cac8I	GCNNGC	2 cut(s)	409, 668
CaiI	CAGNNNCTG	2 cut(s)	227, 344
CciI	TCATGA	1 cut(s)	363
Cfr13I	GGNCC	7 cut(s)	89, 218, 251, 796, 817, 961, 1570
Cfr9I	CCCGGG	1 cut(s)	1313
Csp6I	GTAC	6 cut(s)	133, 891, 1006, 1297, 1584, 2082
CviQI	GTAC	6 cut(s)	133, 891, 1006, 1297, 1584, 2082
DdeI	CTNAG	7 cut(s)	12, 39, 566, 649, 726, 883, 1152
DpnI	GATC	9 cut(s)	18, 105, 207, 396, 438, 457, 519, 1167, 1494
DpnII	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
DraIII	CACNNNGTG	2 cut(s)	243, 1190
EaeI	YGGCCR	2 cut(s)	196, 737
Eam1104I	CTCTTC	5 cut(s)	34, 180, 312, 762, 998
EarI	CTCTTC	5 cut(s)	34, 180, 312, 762, 998
Eco130I	CCWWGG	2 cut(s)	625, 922
Eco32I	GATATC	1 cut(s)	301
Eco47I	GGWCC	3 cut(s)	89, 796, 817
Eco57I	CTGAAG	2 cut(s)	1124, 1594
Eco81I	CCTNAGG	1 cut(s)	1152
Eco88I	CYCGRG	3 cut(s)	813, 1313, 1526
Eco91I	GGTNACC	1 cut(s)	1946
EcoO109I	RGGNCCY	1 cut(s)	796
EcoO65I	GGTNACC	1 cut(s)	1946
EcoRII	CCWGG	5 cut(s)	220, 378, 1082, 1478, 1874
EcoRV	GATATC	1 cut(s)	301
EcoT14I	CCWWGG	2 cut(s)	625, 922
ErhI	CCWWGG	2 cut(s)	625, 922
Esp3I	CGTCTC	1 cut(s)	1710
FalI	AAGNNNNNCTT	6 cut(s)	62, 94, 177, 209, 400, 432
FaqI	GGGAC	4 cut(s)	341, 521, 809, 830
FauNDI	CATATG	2 cut(s)	259, 831
FbaI	TGATCA	2 cut(s)	205, 1492
FblI	GTMKAC	2 cut(s)	722, 1026
Fnu4HI	GCNGC	9 cut(s)	44, 47, 174, 199, 505, 1038, 1133, 1352, 1388
FokI	GGATG	5 cut(s)	1083, 1128, 1141, 1330, 1520
Fsp4HI	GCNGC	9 cut(s)	44, 47, 174, 199, 505, 1038, 1133, 1352, 1388
FspBI	CTAG	5 cut(s)	440, 690, 779, 870, 1958
GluI	GCNGC	9 cut(s)	44, 47, 174, 199, 505, 1038, 1133, 1352, 1388
GsuI	CTGGAG	1 cut(s)	1665
HaeIII	GGCC	8 cut(s)	26, 198, 220, 253, 739, 962, 1390, 1571
HapII	CCGG	5 cut(s)	35, 87, 556, 1314, 1345
Hin1I	GRCGYC	1 cut(s)	1538
HincII	GTYRAC	1 cut(s)	1027
HindII	GTYRAC	1 cut(s)	1027
HinfI	GANTC	8 cut(s)	143, 265, 621, 1079, 1439, 1562, 1748, 1901
HpaII	CCGG	5 cut(s)	35, 87, 556, 1314, 1345
HphI	GGTGA	1 cut(s)	1958
Hpy166II	GTNNAC	6 cut(s)	723, 1027, 1550, 1744, 1770, 2063
Hpy8I	GTNNAC	6 cut(s)	723, 1027, 1550, 1744, 1770, 2063
Hpy99I	CGWCG	1 cut(s)	807
HpyAV	CCTTC	6 cut(s)	833, 1060, 1232, 1277, 1830, 1873
HpyCH4III	ACNGT	6 cut(s)	487, 1190, 1267, 1689, 1729, 1857
HpyCH4IV	ACGT	6 cut(s)	595, 898, 1061, 1258, 1538, 1719
HpyF10VI	GCNNNNNNNGC	2 cut(s)	52, 2003
HpyF3I	CTNAG	7 cut(s)	12, 39, 566, 649, 726, 883, 1152
HpySE526I	ACGT	6 cut(s)	595, 898, 1061, 1258, 1538, 1719
Hsp92I	GRCGYC	1 cut(s)	1538
KflI	GGGWCCC	1 cut(s)	796
Kpn2I	TCCGGA	1 cut(s)	555
Ksp22I	TGATCA	2 cut(s)	205, 1492
Kzo9I	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
LmnI	GCTCC	3 cut(s)	224, 1592, 1882
Lsp1109I	GCAGC	6 cut(s)	55, 160, 491, 1049, 1119, 1363
LweI	GCATC	5 cut(s)	337, 420, 1119, 1639, 1924
MaeI	CTAG	5 cut(s)	440, 690, 779, 870, 1958
MaeII	ACGT	6 cut(s)	595, 898, 1061, 1258, 1538, 1719
MaeIII	GTNAC	7 cut(s)	322, 613, 872, 1613, 1946, 2013, 2048
MalI	GATC	9 cut(s)	18, 105, 207, 396, 438, 457, 519, 1167, 1494
MboI	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
MfeI	CAATTG	3 cut(s)	762, 1553, 2035
MflI	RGATCY	4 cut(s)	16, 394, 436, 455
MhlI	GDGCHC	5 cut(s)	552, 976, 1597, 1746, 1772
MlsI	TGGCCA	1 cut(s)	739
MluNI	TGGCCA	1 cut(s)	739
MlyI	GAGTC	2 cut(s)	1571, 1895
MmeI	TCCRAC	4 cut(s)	1663, 1693, 1839, 1955
Mox20I	TGGCCA	1 cut(s)	739
MroI	TCCGGA	1 cut(s)	555
MroXI	GAANNNNTTC	1 cut(s)	189
MscI	TGGCCA	1 cut(s)	739
MseI	TTAA	1 cut(s)	528
MslI	CAYNNNNRTG	3 cut(s)	568, 1298, 1775
Msp20I	TGGCCA	1 cut(s)	739
MspA1I	CMGCKG	1 cut(s)	1040
MspI	CCGG	5 cut(s)	35, 87, 556, 1314, 1345
MspR9I	CCNGG	8 cut(s)	35, 222, 380, 1084, 1314, 1315, 1480, 1876
MunI	CAATTG	3 cut(s)	762, 1553, 2035
Mva1269I	GAATGC	1 cut(s)	1999
MvaI	CCWGG	5 cut(s)	222, 380, 1084, 1480, 1876
MwoI	GCNNNNNNNGC	2 cut(s)	52, 2003
NciI	CCSGG	3 cut(s)	35, 1314, 1315
NcoI	CCATGG	1 cut(s)	922
NdeI	CATATG	2 cut(s)	259, 831
NdeII	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
NlaIV	GGNNCC	7 cut(s)	18, 64, 785, 797, 798, 818, 1572
NmuCI	GTSAC	2 cut(s)	1946, 2013
NspI	RCATGY	5 cut(s)	697, 1297, 1303, 1409, 1784
NspV	TTCGAA	1 cut(s)	490
OliI	CACNNNNGTG	1 cut(s)	1775
PaeR7I	CTCGAG	1 cut(s)	1526
PagI	TCATGA	1 cut(s)	363
PciI	ACATGT	2 cut(s)	1293, 1299
PctI	GAATGC	1 cut(s)	1999
PdmI	GAANNNNTTC	1 cut(s)	189
PfeI	GAWTC	6 cut(s)	143, 265, 621, 1079, 1439, 1748
PfoI	TCCNGGA	1 cut(s)	1874
PkrI	GCNGC	9 cut(s)	45, 48, 175, 200, 506, 1039, 1134, 1353, 1389
PleI	GAGTC	2 cut(s)	1570, 1895
PpsI	GAGTC	2 cut(s)	1570, 1895
Ppu21I	YACGTR	2 cut(s)	899, 1259
PpuMI	RGGWCCY	1 cut(s)	796
PscI	ACATGT	2 cut(s)	1293, 1299
PshAI	GACNNNNGTC	1 cut(s)	801
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	5 cut(s)	220, 378, 1082, 1478, 1874
PspEI	GGTNACC	1 cut(s)	1946
PspGI	CCWGG	5 cut(s)	220, 378, 1082, 1478, 1874
PspN4I	GGNNCC	7 cut(s)	18, 64, 785, 797, 798, 818, 1572
PspPI	GGNCC	7 cut(s)	89, 218, 251, 796, 817, 961, 1570
PspPPI	RGGWCCY	1 cut(s)	796
PsrI	GAACNNNNNNTAC	2 cut(s)	857, 889
PstI	CTGCAG	3 cut(s)	509, 1137, 1447
PstNI	CAGNNNCTG	2 cut(s)	227, 344
PsuI	RGATCY	4 cut(s)	16, 394, 436, 455
PvuII	CAGCTG	1 cut(s)	1040
RsaI	GTAC	6 cut(s)	134, 892, 1007, 1298, 1585, 2083
RsaNI	GTAC	6 cut(s)	133, 891, 1006, 1297, 1584, 2082
RseI	CAYNNNNRTG	3 cut(s)	568, 1298, 1775
SalI	GTCGAC	1 cut(s)	1025
SaqAI	TTAA	1 cut(s)	528
SatI	GCNGC	9 cut(s)	44, 47, 174, 199, 505, 1038, 1133, 1352, 1388
Sau3AI	GATC	9 cut(s)	16, 103, 205, 394, 436, 455, 517, 1165, 1492
Sau96I	GGNCC	7 cut(s)	89, 218, 251, 796, 817, 961, 1570
ScaI	AGTACT	2 cut(s)	134, 892
SchI	GAGTC	2 cut(s)	1571, 1895
ScrFI	CCNGG	8 cut(s)	35, 222, 380, 1084, 1314, 1315, 1480, 1876
SduI	GDGCHC	5 cut(s)	552, 976, 1597, 1746, 1772
SfaNI	GCATC	5 cut(s)	337, 420, 1119, 1639, 1924
SfcI	CTRYAG	3 cut(s)	505, 1133, 1443
Sfr274I	CTCGAG	1 cut(s)	1526
SfuI	TTCGAA	1 cut(s)	490
SinI	GGWCC	3 cut(s)	89, 796, 817
SlaI	CTCGAG	1 cut(s)	1526
SmaI	CCCGGG	1 cut(s)	1315
SmiMI	CAYNNNNRTG	3 cut(s)	568, 1298, 1775
SmlI	CTYRAG	1 cut(s)	1526
SmoI	CTYRAG	1 cut(s)	1526
SpeI	ACTAGT	1 cut(s)	1957
SsiI	CCGC	6 cut(s)	5, 47, 199, 820, 1387, 1466
SspMI	CTAG	5 cut(s)	440, 690, 779, 870, 1958
StyD4I	CCNGG	8 cut(s)	33, 220, 378, 1082, 1312, 1313, 1478, 1874
StyI	CCWWGG	2 cut(s)	625, 922
TaaI	ACNGT	6 cut(s)	487, 1190, 1267, 1689, 1729, 1857
TaiI	ACGT	6 cut(s)	598, 901, 1064, 1261, 1541, 1722
TatI	WGTACW	4 cut(s)	132, 890, 1296, 1583
TauI	GCSGC	3 cut(s)	49, 201, 1390
TfiI	GAWTC	6 cut(s)	143, 265, 621, 1079, 1439, 1748
Tru1I	TTAA	1 cut(s)	528
Tru9I	TTAA	1 cut(s)	528
TscAI	CASTG	5 cut(s)	27, 734, 971, 1142, 1193
TseFI	GTSAC	2 cut(s)	1946, 2013
TseI	GCWGC	6 cut(s)	43, 173, 504, 1037, 1132, 1351
Tsp45I	GTSAC	2 cut(s)	1946, 2013
TspDTI	ATGAA	6 cut(s)	203, 380, 789, 815, 878, 1449
TspMI	CCCGGG	1 cut(s)	1313
TspRI	CASTG	5 cut(s)	27, 734, 971, 1142, 1193
VneI	GTGCAC	2 cut(s)	1742, 1768
VpaK11BI	GGWCC	3 cut(s)	89, 796, 817
XapI	RAATTY	4 cut(s)	368, 522, 707, 1790
XbaI	TCTAGA	1 cut(s)	439
XceI	RCATGY	5 cut(s)	697, 1297, 1303, 1409, 1784
XhoI	CTCGAG	1 cut(s)	1526
XmaI	CCCGGG	1 cut(s)	1313
XmiI	GTMKAC	2 cut(s)	722, 1026
XmnI	GAANNNNTTC	1 cut(s)	189
XspI	CTAG	5 cut(s)	440, 690, 779, 870, 1958
ZraI	GACGTC	1 cut(s)	1539
ZrmI	AGTACT	2 cut(s)	134, 892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.