Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003342.1

Orthogroup ID

OG0000312

Physical Location & Seq

Genomic Coordinates Reverse (-)

74386 .. 79148

Gene Structure 4763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003342.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

atggtgagctcagacggattgagtgcttccccgccgccgccgcaggcggtgtcggcaaagcaattcggggtcacaaagccgatttcgacggccgggcctactgaagccgatactcagagaactttagagttggagaaggtttgtgctttcgaaatttttctttggaaagattgtttaggtttgattctttttatggtttctgataattgggtttatggatttttgaagcttttggttgaagccgggctttacgaaagcaaaggggaagctgccaagagagaggaggttcttcaccgaattgggcagattgttaaggattgggtaaagcaacttactcagttgagaggatacacagatcaaatggttcaggatgctaatgctcttatttttacatttggttcctataggcttggggtacatggtcctggggctgacatagacacattgtgtgttgggccatcttatgtcaaccgtgaggaagacttcttctttgtattgcacaacattctggctgaaatggaagaagtgactgaactgcaaccagttccagatgcccatgttcccgtaatgaggtttaagtttgatggaatatcaatcgacctcctttatgcaagtgtttctctgttggttgtaccagaagacctggacatttctgatgtatctctgttgtacaacatcgatgagcctactgttcgaagtcttaatggctgcagggttgctgatcaaattcttaagcttgttccaaatgttgagcatttctgtacaacactccgatgcttgaagttttgggcgaaaaggcgtggtgtttattccaatgttactggatttcttggtggtgtgaactgggctctcctcgttgcccgagtgtgtcaactttatcctaatgcagttcctagcatgctggtttctcgattttttagagtctacacacagtggcgatggccaaatcctgtcatgttatgtgctattgaagaggatgaacttggttttaatgtttgggacccacgcaaaaatcctcgcgaccgtactcatcatatgccaattataactcctgcatacccttgtatgaactctagctacaatgtttctaaaagtaccctccgtgtcatgatggagcagtttcagcagggaaacaagatttctgaggaaatagagctgaataaagctaggtggtgtgctctgtttgaaccatatttgttctttgaaagctacaagaactatctccaggtcgacatcgttgcagttgatgctgatgatctgcgtgcttggaaaggctgggtggaatctcggttgaggcaactgactctaatgattgagcgggatactttggagatgttacaatgtcacccatatcctcatgagtatgtggatacgaccaaacagtgtgcacatagtgctttctttatgggtttgcagaggaaacaaggtgaaaaggttcagggtcagcagttcgatatacgggggactgttgatgagttcaagcagtccattgagatgtacaatttttggaaacctgggatggaaatttatgtttctcacgttcgaagaaggcaacttccttcttatgtgtttcctgatggttgtaaacgaccgagaccatctagagctgtggccctgcagcataataatgaagttagtccgacgggttctggtgagagacacctgaagaggaagaatgatcttggtgggggttcgccaccgaaacgactatctaatagccctcagccccaggattcaatatctcctgaaattatgactcacagagcaggaagtgcatctccagagacttttgataaatgctttagtttggaggtagttgattcaaataaaaaaacgttgtccggtgaactggagcctggagatgcgaccaattccagtgttgttacgagtgttgcaagcatgagcagtagtgaagatgctggatttggatcaatgactggtagctgtgaggggaatactaaaagtgttgaaggaagcagtattgggagtaacactgcttctttatgtgaggcagactccgaatctctttcagttaacggaggcgaaaatggcaaccttgtgcaaagtggatcacaagaaggattagagttgaatgctgcatttgggatgatacttaatcctagtgagggagtaagatcggaaggtgtgcagaaagcagtgatgaggttgggtttaacctcaatggcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0070566 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

729

Amino Acids

81.34

Weight (kDa)

5.45

Isoelectric Point (pI)

48.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca	FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica	MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica	Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis	pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis	RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata	RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora	Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii	Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa	Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha	Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana	Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1046
AccBSI	CCGCTC	1 cut(s)	1318
AccI	GTMKAC	2 cut(s)	924, 1230
AccII	CGCG	1 cut(s)	1020
AciI	CCGC	6 cut(s)	32, 35, 38, 41, 47, 1318
AclI	AACGTT	1 cut(s)	1835
AclWI	GGATC	2 cut(s)	1936, 2077
AcoI	YGGCCR	2 cut(s)	90, 941
AcsI	RAATTY	3 cut(s)	153, 726, 1524
AcuI	CTGAAG	2 cut(s)	123, 1685
AdeI	CACNNNGTG	3 cut(s)	447, 933, 1394
AfaI	GTAC	7 cut(s)	417, 633, 671, 763, 1027, 1096, 1499
AfiI	CCNNNNNNNGG	2 cut(s)	570, 2126
AflII	CTTAAG	1 cut(s)	731
AjnI	CCWGG	6 cut(s)	424, 642, 1224, 1513, 1728, 1855
Alw21I	GWGCWC	3 cut(s)	11, 1180, 1390
Alw26I	GTCTC	3 cut(s)	1588, 1651, 1778
Alw44I	GTGCAC	1 cut(s)	1386
AlwI	GGATC	2 cut(s)	1936, 2077
Ama87I	CYCGRG	1 cut(s)	861
AoxI	GGCC	6 cut(s)	90, 95, 455, 941, 1611, 2184
ApaLI	GTGCAC	1 cut(s)	1386
ApeKI	GCWGC	4 cut(s)	269, 708, 1618, 2096
ApoI	RAATTY	3 cut(s)	153, 726, 1524
ArsI	GACNNNNNNTTYG	2 cut(s)	473, 505
Asp700I	GAANNNNTTC	2 cut(s)	156, 1434
AspS9I	GGNCC	5 cut(s)	95, 422, 455, 1000, 1612
AsuC2I	CCSGG	2 cut(s)	94, 244
AsuHPI	GGTGA	6 cut(s)	16, 284, 1337, 1439, 1664, 1856
AsuII	TTCGAA	3 cut(s)	150, 694, 1543
AvaI	CYCGRG	1 cut(s)	861
AvaII	GGWCC	2 cut(s)	422, 1000
BaeGI	GKGCMC	1 cut(s)	1390
BalI	TGGCCA	1 cut(s)	943
BanII	GRGCYC	2 cut(s)	11, 850
BarI	GAAGNNNNNNTAC	2 cut(s)	1981, 2013
BbsI	GAAGAC	2 cut(s)	486, 645
Bbv12I	GWGCWC	3 cut(s)	11, 1180, 1390
BbvCI	CCTCAGC	1 cut(s)	1722
BbvI	GCAGC	4 cut(s)	256, 695, 1630, 2083
BccI	CCATC	7 cut(s)	466, 578, 933, 1105, 1513, 1571, 1606
BceAI	ACGGC	1 cut(s)	105
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	6 cut(s)	426, 644, 1226, 1515, 1730, 1857
BciVI	GTATCC	3 cut(s)	341, 1315, 1363
BclI	TGATCA	1 cut(s)	721
BcnI	CCSGG	2 cut(s)	94, 244
BcoDI	GTCTC	3 cut(s)	1588, 1651, 1778
BfaI	CTAG	5 cut(s)	894, 1074, 1167, 1602, 2121
BfmI	CTRYAG	3 cut(s)	403, 709, 1616
BfrI	CTTAAG	1 cut(s)	731
BfuI	GTATCC	3 cut(s)	341, 1315, 1363
BisI	GCNGC	7 cut(s)	35, 38, 41, 270, 709, 1619, 2097
BlsI	GCNGC	7 cut(s)	36, 39, 42, 271, 710, 1620, 2098
Bme1390I	CCNGG	8 cut(s)	94, 244, 426, 644, 1226, 1515, 1730, 1857
Bme18I	GGWCC	2 cut(s)	422, 1000
BmeT110I	CYCGRG	1 cut(s)	861
BmgT120I	GGNCC	5 cut(s)	95, 422, 455, 1000, 1612
BmiI	GGNNCC	4 cut(s)	400, 1001, 1002, 1854
BmrFI	CCNGG	8 cut(s)	94, 244, 426, 644, 1226, 1515, 1730, 1857
BmrI	ACTGGG	1 cut(s)	853
BmsI	GCATC	7 cut(s)	361, 541, 764, 1237, 1784, 1852, 1906
BmuI	ACTGGG	1 cut(s)	853
BpiI	GAAGAC	2 cut(s)	486, 645
BplI	GAGNNNNNCTC	2 cut(s)	2000, 2032
BpmI	CTGGAG	4 cut(s)	1208, 1764, 1871, 1878
Bpu10I	CCTNAGC	1 cut(s)	1722
Bpu14I	TTCGAA	3 cut(s)	150, 694, 1543
BpuMI	CCSGG	2 cut(s)	94, 244
Bsa29I	ATCGAT	1 cut(s)	678
BsaBI	GATNNNNATC	1 cut(s)	1927
BsaI	GGTCTC	1 cut(s)	1588
BsaJI	CCNNGG	3 cut(s)	425, 1514, 1728
BsaWI	WCCGGW	1 cut(s)	1841
Bsc4I	CCNNNNNNNGG	2 cut(s)	570, 2126
Bse1I	ACTGG	6 cut(s)	542, 826, 848, 1854, 1875, 1942
Bse8I	GATNNNNATC	1 cut(s)	1927
BseBI	CCWGG	6 cut(s)	426, 644, 1226, 1515, 1730, 1857
BseCI	ATCGAT	1 cut(s)	678
BseDI	CCNNGG	3 cut(s)	425, 1514, 1728
BseGI	GGATG	4 cut(s)	376, 982, 1524, 2112
BseJI	GATNNNNATC	1 cut(s)	1927
BseLI	CCNNNNNNNGG	2 cut(s)	570, 2126
BseMII	CTCAG	5 cut(s)	24, 128, 350, 1134, 1736
BseNI	ACTGG	6 cut(s)	542, 826, 848, 1854, 1875, 1942
BseRI	GAGGAG	2 cut(s)	296, 842
BseSI	GKGCMC	1 cut(s)	1390
BseX3I	CGGCCG	1 cut(s)	90
BseXI	GCAGC	4 cut(s)	256, 695, 1630, 2083
BseYI	CCCAGC	1 cut(s)	1275
BsgI	GTGCAG	1 cut(s)	2168
Bsh1236I	CGCG	1 cut(s)	1020
Bsh1285I	CGRYCG	3 cut(s)	93, 1024, 1592
BshFI	GGCC	6 cut(s)	92, 97, 457, 943, 1613, 2186
BshVI	ATCGAT	1 cut(s)	678
BsiEI	CGRYCG	3 cut(s)	93, 1024, 1592
BsiHKAI	GWGCWC	3 cut(s)	11, 1180, 1390
BsiHKCI	CYCGRG	1 cut(s)	861
BsiSI	CCGG	3 cut(s)	93, 243, 1842
BslFI	GGGAC	2 cut(s)	1013, 1477
BslI	CCNNNNNNNGG	2 cut(s)	570, 2126
BsmAI	GTCTC	3 cut(s)	1588, 1651, 1778
BsmFI	GGGAC	2 cut(s)	1013, 1477
BsmI	GAATGC	1 cut(s)	2098
BsnI	GGCC	6 cut(s)	92, 97, 457, 943, 1613, 2186
Bso31I	GGTCTC	1 cut(s)	1588
BsoBI	CYCGRG	1 cut(s)	861
Bsp119I	TTCGAA	3 cut(s)	150, 694, 1543
Bsp1286I	GDGCHC	4 cut(s)	11, 850, 1180, 1390
Bsp1407I	TGTACA	3 cut(s)	669, 761, 1497
Bsp143I	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
Bsp68I	TCGCGA	1 cut(s)	1020
BspACI	CCGC	6 cut(s)	32, 35, 38, 41, 47, 1318
BspANI	GGCC	6 cut(s)	92, 97, 457, 943, 1613, 2186
BspCNI	CTCAG	5 cut(s)	23, 127, 349, 1135, 1735
BspDI	ATCGAT	1 cut(s)	678
BspFNI	CGCG	1 cut(s)	1020
BspHI	TCATGA	2 cut(s)	1107, 1357
BspLI	GGNNCC	4 cut(s)	400, 1001, 1002, 1854
BspMAI	CTGCAG	2 cut(s)	713, 1620
BspPI	GGATC	2 cut(s)	1936, 2077
BspT104I	TTCGAA	3 cut(s)	150, 694, 1543
BspTI	CTTAAG	1 cut(s)	731
BspTNI	GGTCTC	1 cut(s)	1588
BsrBI	CCGCTC	1 cut(s)	1318
BsrGI	TGTACA	3 cut(s)	669, 761, 1497
BsrI	ACTGG	6 cut(s)	542, 826, 848, 1854, 1875, 1942
BssECI	CCNNGG	3 cut(s)	425, 1514, 1728
BssMI	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
Bst2UI	CCWGG	6 cut(s)	426, 644, 1226, 1515, 1730, 1857
Bst4CI	ACNGT	6 cut(s)	473, 691, 933, 1025, 1383, 1468
Bst6I	CTCTTC	2 cut(s)	966, 1661
BstAFI	CTTAAG	1 cut(s)	731
BstAPI	GCANNNNNTGC	3 cut(s)	1247, 1394, 1772
BstAUI	TGTACA	3 cut(s)	669, 761, 1497
BstBI	TTCGAA	3 cut(s)	150, 694, 1543
BstC8I	GCNNGC	4 cut(s)	45, 899, 1263, 1897
BstDEI	CTNAG	5 cut(s)	10, 114, 336, 1143, 1722
BstF5I	GGATG	4 cut(s)	376, 982, 1524, 2112
BstFNI	CGCG	1 cut(s)	1020
BstKTI	GATC	7 cut(s)	358, 724, 1258, 1681, 1931, 2072, 2138
BstMAI	GTCTC	3 cut(s)	1588, 1651, 1778
BstMBI	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
BstMCI	CGRYCG	3 cut(s)	93, 1024, 1592
BstMWI	GCNNNNNNNGC	7 cut(s)	40, 53, 1123, 1247, 1394, 1772, 2049
BstNI	CCWGG	6 cut(s)	426, 644, 1226, 1515, 1730, 1857
BstNSI	RCATGY	1 cut(s)	901
BstSCI	CCNGG	8 cut(s)	92, 242, 424, 642, 1224, 1513, 1728, 1855
BstSFI	CTRYAG	3 cut(s)	403, 709, 1616
BstSLI	GKGCMC	1 cut(s)	1390
BstUI	CGCG	1 cut(s)	1020
BstV1I	GCAGC	4 cut(s)	256, 695, 1630, 2083
BstV2I	GAAGAC	2 cut(s)	486, 645
BstZI	CGGCCG	1 cut(s)	90
Bsu15I	ATCGAT	1 cut(s)	678
BsuI	GTATCC	3 cut(s)	341, 1315, 1363
BsuRI	GGCC	6 cut(s)	92, 97, 457, 943, 1613, 2186
BsuTUI	ATCGAT	1 cut(s)	678
BtgZI	GCGATG	1 cut(s)	952
BtsCI	GGATG	4 cut(s)	376, 982, 1524, 2112
BtsI	GCAGTG	2 cut(s)	1992, 2163
BtsIMutI	CAGTG	5 cut(s)	938, 1388, 1882, 1992, 2163
BtuMI	TCGCGA	1 cut(s)	1020
Cac8I	GCNNGC	4 cut(s)	45, 899, 1263, 1897
CciI	TCATGA	2 cut(s)	1107, 1357
Cfr13I	GGNCC	5 cut(s)	95, 422, 455, 1000, 1612
ClaI	ATCGAT	1 cut(s)	678
Csp6I	GTAC	7 cut(s)	416, 632, 670, 762, 1026, 1095, 1498
CviAII	CATG	7 cut(s)	419, 557, 898, 955, 1108, 1358, 1900
CviQI	GTAC	7 cut(s)	416, 632, 670, 762, 1026, 1095, 1498
DdeI	CTNAG	5 cut(s)	10, 114, 336, 1143, 1722
DpnI	GATC	7 cut(s)	357, 723, 1257, 1680, 1930, 2071, 2137
DpnII	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
DraIII	CACNNNGTG	3 cut(s)	447, 933, 1394
EaeI	YGGCCR	2 cut(s)	90, 941
EagI	CGGCCG	1 cut(s)	90
Eam1104I	CTCTTC	2 cut(s)	966, 1661
EarI	CTCTTC	2 cut(s)	966, 1661
Ecl136II	GAGCTC	1 cut(s)	9
EclXI	CGGCCG	1 cut(s)	90
Eco24I	GRGCYC	2 cut(s)	11, 850
Eco31I	GGTCTC	1 cut(s)	1588
Eco47I	GGWCC	2 cut(s)	422, 1000
Eco52I	CGGCCG	1 cut(s)	90
Eco53kI	GAGCTC	1 cut(s)	9
Eco57I	CTGAAG	2 cut(s)	123, 1685
Eco88I	CYCGRG	1 cut(s)	861
EcoICRI	GAGCTC	1 cut(s)	9
EcoO109I	RGGNCCY	1 cut(s)	1000
EcoRII	CCWGG	6 cut(s)	424, 642, 1224, 1513, 1728, 1855
EcoT38I	GRGCYC	2 cut(s)	11, 850
FaeI	CATG	7 cut(s)	422, 560, 901, 958, 1111, 1361, 1903
FalI	AAGNNNNNCTT	2 cut(s)	231, 263
FaqI	GGGAC	2 cut(s)	1013, 1477
FatI	CATG	7 cut(s)	418, 556, 897, 954, 1107, 1357, 1899
FauI	CCCGC	2 cut(s)	39, 1311
FauNDI	CATATG	1 cut(s)	1035
FbaI	TGATCA	1 cut(s)	721
FblI	GTMKAC	2 cut(s)	924, 1230
Fnu4HI	GCNGC	7 cut(s)	35, 38, 41, 270, 709, 1619, 2097
FokI	GGATG	4 cut(s)	383, 989, 1531, 2119
FriOI	GRGCYC	2 cut(s)	11, 850
Fsp4HI	GCNGC	7 cut(s)	35, 38, 41, 270, 709, 1619, 2097
FspBI	CTAG	5 cut(s)	894, 1074, 1167, 1602, 2121
GluI	GCNGC	7 cut(s)	35, 38, 41, 270, 709, 1619, 2097
GsaI	CCCAGC	1 cut(s)	1279
GsuI	CTGGAG	4 cut(s)	1208, 1764, 1871, 1878
HaeIII	GGCC	6 cut(s)	92, 97, 457, 943, 1613, 2186
HapII	CCGG	3 cut(s)	93, 243, 1842
Hin1II	CATG	7 cut(s)	422, 560, 901, 958, 1111, 1361, 1903
HincII	GTYRAC	4 cut(s)	469, 872, 1231, 2035
HindII	GTYRAC	4 cut(s)	469, 872, 1231, 2035
HindIII	AAGCTT	2 cut(s)	227, 734
HinfI	GANTC	9 cut(s)	184, 921, 1283, 1303, 1733, 1756, 1820, 2015, 2021
HpaI	GTTAAC	1 cut(s)	2035
HpaII	CCGG	3 cut(s)	93, 243, 1842
HphI	GGTGA	6 cut(s)	16, 284, 1337, 1439, 1664, 1856
Hpy166II	GTNNAC	9 cut(s)	469, 841, 872, 925, 1231, 1388, 1586, 1847, 2035
Hpy188I	TCNGA	9 cut(s)	13, 117, 202, 655, 773, 1144, 1641, 2020, 2140
Hpy8I	GTNNAC	9 cut(s)	469, 841, 872, 925, 1231, 1388, 1586, 1847, 2035
Hpy99I	CGWCG	2 cut(s)	91, 1645
HpyAV	CCTTC	6 cut(s)	130, 1542, 1569, 1964, 2072, 2135
HpyCH4III	ACNGT	6 cut(s)	473, 691, 933, 1025, 1383, 1468
HpyCH4IV	ACGT	2 cut(s)	1539, 1835
HpyF10VI	GCNNNNNNNGC	7 cut(s)	40, 53, 1123, 1247, 1394, 1772, 2049
HpyF3I	CTNAG	5 cut(s)	10, 114, 336, 1143, 1722
HpySE526I	ACGT	2 cut(s)	1539, 1835
Hsp92II	CATG	7 cut(s)	422, 560, 901, 958, 1111, 1361, 1903
KflI	GGGWCCC	1 cut(s)	1000
Ksp22I	TGATCA	1 cut(s)	721
KspAI	GTTAAC	1 cut(s)	2035
Kzo9I	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
LmnI	GCTCC	2 cut(s)	1114, 1852
Lsp1109I	GCAGC	4 cut(s)	256, 695, 1630, 2083
LweI	GCATC	7 cut(s)	361, 541, 764, 1237, 1784, 1852, 1906
MaeI	CTAG	5 cut(s)	894, 1074, 1167, 1602, 2121
MaeII	ACGT	2 cut(s)	1539, 1835
MaeIII	GTNAC	7 cut(s)	70, 526, 817, 1335, 1343, 1882, 1988
MalI	GATC	7 cut(s)	357, 723, 1257, 1680, 1930, 2071, 2137
MbiI	CCGCTC	1 cut(s)	1318
MboI	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
MhlI	GDGCHC	4 cut(s)	11, 850, 1180, 1390
MlsI	TGGCCA	1 cut(s)	943
MluNI	TGGCCA	1 cut(s)	943
MlyI	GAGTC	4 cut(s)	930, 1297, 1750, 2009
MmeI	TCCRAC	2 cut(s)	111, 1664
Mox20I	TGGCCA	1 cut(s)	943
MroXI	GAANNNNTTC	2 cut(s)	156, 1434
MscI	TGGCCA	1 cut(s)	943
MseI	TTAA	8 cut(s)	312, 576, 702, 732, 990, 2034, 2115, 2174
MslI	CAYNNNNRTG	4 cut(s)	772, 1362, 1493, 1626
Msp20I	TGGCCA	1 cut(s)	943
MspCI	CTTAAG	1 cut(s)	731
MspI	CCGG	3 cut(s)	93, 243, 1842
MspR9I	CCNGG	8 cut(s)	94, 244, 426, 644, 1226, 1515, 1730, 1857
Mva1269I	GAATGC	1 cut(s)	2098
MvaI	CCWGG	6 cut(s)	426, 644, 1226, 1515, 1730, 1857
MvnI	CGCG	1 cut(s)	1020
MwoI	GCNNNNNNNGC	7 cut(s)	40, 53, 1123, 1247, 1394, 1772, 2049
NciI	CCSGG	2 cut(s)	94, 244
NdeI	CATATG	1 cut(s)	1035
NdeII	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
NlaIII	CATG	7 cut(s)	422, 560, 901, 958, 1111, 1361, 1903
NlaIV	GGNNCC	4 cut(s)	400, 1001, 1002, 1854
NmuCI	GTSAC	3 cut(s)	70, 526, 1343
NruI	TCGCGA	1 cut(s)	1020
NspI	RCATGY	1 cut(s)	901
NspV	TTCGAA	3 cut(s)	150, 694, 1543
PaeI	GCATGC	1 cut(s)	901
PagI	TCATGA	2 cut(s)	1107, 1357
PctI	GAATGC	1 cut(s)	2098
PdmI	GAANNNNTTC	2 cut(s)	156, 1434
PfeI	GAWTC	5 cut(s)	184, 1283, 1733, 1820, 2021
PkrI	GCNGC	7 cut(s)	36, 39, 42, 271, 710, 1620, 2098
PleI	GAGTC	4 cut(s)	929, 1297, 1750, 2009
PpsI	GAGTC	4 cut(s)	929, 1297, 1750, 2009
PpuMI	RGGWCCY	1 cut(s)	1000
PsiI	TTATAA	1 cut(s)	1046
Psp124BI	GAGCTC	1 cut(s)	11
Psp1406I	AACGTT	1 cut(s)	1835
Psp5II	RGGWCCY	1 cut(s)	1000
Psp6I	CCWGG	6 cut(s)	424, 642, 1224, 1513, 1728, 1855
PspFI	CCCAGC	1 cut(s)	1275
PspGI	CCWGG	6 cut(s)	424, 642, 1224, 1513, 1728, 1855
PspN4I	GGNNCC	4 cut(s)	400, 1001, 1002, 1854
PspPI	GGNCC	5 cut(s)	95, 422, 455, 1000, 1612
PspPPI	RGGWCCY	1 cut(s)	1000
PsrI	GAACNNNNNNTAC	2 cut(s)	1061, 1093
PstI	CTGCAG	2 cut(s)	713, 1620
RruI	TCGCGA	1 cut(s)	1020
RsaI	GTAC	7 cut(s)	417, 633, 671, 763, 1027, 1096, 1499
RsaNI	GTAC	7 cut(s)	416, 632, 670, 762, 1026, 1095, 1498
RseI	CAYNNNNRTG	4 cut(s)	772, 1362, 1493, 1626
SacI	GAGCTC	1 cut(s)	11
SalI	GTCGAC	1 cut(s)	1229
SaqAI	TTAA	8 cut(s)	312, 576, 702, 732, 990, 2034, 2115, 2174
SatI	GCNGC	7 cut(s)	35, 38, 41, 270, 709, 1619, 2097
Sau3AI	GATC	7 cut(s)	355, 721, 1255, 1678, 1928, 2069, 2135
Sau96I	GGNCC	5 cut(s)	95, 422, 455, 1000, 1612
SchI	GAGTC	4 cut(s)	930, 1297, 1750, 2009
ScrFI	CCNGG	8 cut(s)	94, 244, 426, 644, 1226, 1515, 1730, 1857
SduI	GDGCHC	4 cut(s)	11, 850, 1180, 1390
SfaNI	GCATC	7 cut(s)	361, 541, 764, 1237, 1784, 1852, 1906
SfcI	CTRYAG	3 cut(s)	403, 709, 1616
SfuI	TTCGAA	3 cut(s)	150, 694, 1543
SinI	GGWCC	2 cut(s)	422, 1000
SmiMI	CAYNNNNRTG	4 cut(s)	772, 1362, 1493, 1626
SmlI	CTYRAG	1 cut(s)	731
SmoI	CTYRAG	1 cut(s)	731
SphI	GCATGC	1 cut(s)	901
SsiI	CCGC	6 cut(s)	32, 35, 38, 41, 47, 1318
SspMI	CTAG	5 cut(s)	894, 1074, 1167, 1602, 2121
SstI	GAGCTC	1 cut(s)	11
StyD4I	CCNGG	8 cut(s)	92, 242, 424, 642, 1224, 1513, 1728, 1855
TaaI	ACNGT	6 cut(s)	473, 691, 933, 1025, 1383, 1468
TaiI	ACGT	2 cut(s)	1542, 1838
TaqI	TCGA	9 cut(s)	86, 150, 597, 678, 694, 910, 1230, 1452, 1543
TaqII	GACCGA	1 cut(s)	1606
TatI	WGTACW	3 cut(s)	669, 761, 1497
TauI	GCSGC	3 cut(s)	37, 40, 43
TfiI	GAWTC	5 cut(s)	184, 1283, 1733, 1820, 2021
Tru1I	TTAA	8 cut(s)	312, 576, 702, 732, 990, 2034, 2115, 2174
Tru9I	TTAA	8 cut(s)	312, 576, 702, 732, 990, 2034, 2115, 2174
TscAI	CASTG	5 cut(s)	938, 1388, 1882, 1999, 2163
TseFI	GTSAC	3 cut(s)	70, 526, 1343
TseI	GCWGC	4 cut(s)	269, 708, 1618, 2096
Tsp45I	GTSAC	3 cut(s)	70, 526, 1343
TspDTI	ATGAA	3 cut(s)	993, 1082, 1644
TspGWI	ACGGA	3 cut(s)	30, 1091, 2052
TspRI	CASTG	5 cut(s)	938, 1388, 1882, 1999, 2163
Vha464I	CTTAAG	1 cut(s)	731
VneI	GTGCAC	1 cut(s)	1386
VpaK11BI	GGWCC	2 cut(s)	422, 1000
XapI	RAATTY	3 cut(s)	153, 726, 1524
XbaI	TCTAGA	1 cut(s)	1601
XceI	RCATGY	1 cut(s)	901
XmiI	GTMKAC	2 cut(s)	924, 1230
XmnI	GAANNNNTTC	2 cut(s)	156, 1434
XspI	CTAG	5 cut(s)	894, 1074, 1167, 1602, 2121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.