Rh2AG416300

Poly(A) polymerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
61792801 .. 61797345
4545 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG416300.1

Sequence Viewer

Length: 1569 bp
ATGCAAGCGATGAGCTCAGAGGGGTTGAGTGCTTCGCCACAGCCTACGCAGGCCGTGGTCGGTAAGCAATACCGAGTGACAAAGCCACTTTTGACAGCGGGGCCAACTGAATCCGATATTCAGAGAACTTTGGAGTTAAAGAAGTTCTTGGTTGAAGCTGGGCTTTATGAAAGCGAAGAGGAAGCTGCCAAGAGAGAGGAGGTTCTTCACCGAATTGGGCAGATTGTTAAGGATTGGGTGAAGCAACTTACTCGGTTGAGACGATACACAGATCAAATGGTTGAGGATGCTAATGCTCTTCTTTTTACATTTGGTTCGTATAGGCTTGGGGTACATGGTCCTGGGGATGGGATAGACACATTGTGTGTTGGGCCATCTTATGTCAACCGTGAGGAAGACTTCTTTATTGTATTGCACGACACTCTGGCTGAAATGGAAGAAGTGACTGAACTGCAACCAGTTCCAGATGCTTATGTTCCCGTAATGAAGTTTAAGTTCGATGGAATATCAATCGACCTCCTTTATACAAGTGTTACTCTGTTGGTTGTACCAGAAGACCTGGCCATTTCTGTTGTATCTCTGTTGTACAACATCGATGAGCCTACTTGGCGATGGCCAAATCCTGTTATGTTATGTGCCATTGAAGAGGATGAACTTGGTTTTGGTGTTTGGGACCCACGCAAAAATCCTCGTGACCGGACTCATCATATGCCAATTATAACTCCTGCATACCCTTGTATGAACTCTAGCTACAATGTTTCTAAAAGTACCCTCCGAGTCATGATGGAGCAGTTTCAGCATGGGAACAAGATTTCTGAGGAAATAGAACTGGATAAAGCTAAGTGGTGTGCTCTGTTCGAACCATATTTGTTCTTTAAAAGCTATAAGAACTATCTCCAGGTCGACATAGTTGCAGTTGATGTTGATGATCTGCGTGCTTGGAAAGGCTGGGTGGAATCTCGGTTGAGGAAACCTACTCTAATGATTGAGCGGGATACTATGGAGATGTTACAATGCCACCCATATCCTCACACGTATGTTGATAAAACCAAACAGTGTGCACACAGTGCTTTCTATATGGGTTTGCAGAGGAAGCAGGGGGATAAGGTTCAGGGTCAGCAGTTTGATATAAGAGGGACAGTTGATGAGTTTAAGCTGTCCATTAATATGTACAATTTTTGGAAACCTGGGATGGAAATTTACTTTTCTCATGTTCGTAGAAGCCAACTTCCTTTTTACGTGTTTCCTGATGGTAGTAAACGACCTATACAGTCCAGAGTTTTGGCCAAGCAGGATCATGAAGATAGTGGGACGAGTTCTGGTGAGAGACACCTGAATTGGAAGAGTGATCTTGGTGGGGGTTCGCCGGAGAAACAACCTGCATCCATCATCACTTACAAAGCAGGAAGTGCATCTCCAGAGATTTTGGATAAATGTGTTGGTGTGGAGGTAGTTGAATCAAATAAAATAACGTTGTCTGGAGAACTGGAGCCTGGAGATGCCTCAAATTCCAATGTTATTACAAACGTTACTAGCATGACTAGTGTTTTCGAAAAATTTGGTATATAG

Protein Analysis

522

Amino Acids

59.33

Weight (kDa)

5.34

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAP_NTPase PF20750 26 - 204 2.7e-58 Poly(A) polymerase nucleotidyltransferase domain
NTP_transf_2 PF01909 85 - 174 3.5e-08 Nucleotidyltransferase domain
PAP_central PF04928 161 - 287 8.8e-33 Poly(A) polymerase central domain
PAP_RNA-bind PF04926 291 - 349 1.8e-08 Poly(A) polymerase predicted RNA binding domain
PAP_RNA-bind PF04926 348 - 422 1.2e-06 Poly(A) polymerase predicted RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000312)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 719
Acc36I ACCTGC 1 cut(s) 1387
AccBSI CCGCTC 1 cut(s) 991
AccI GTMKAC 1 cut(s) 903
AciI CCGC 2 cut(s) 98, 991
AclI AACGTT 2 cut(s) 1472, 1527
AclWI GGATC 1 cut(s) 1302
AcoI YGGCCR 3 cut(s) 561, 614, 1284
AcsI RAATTY 3 cut(s) 1197, 1507, 1556
AdeI CACNNNGTG 2 cut(s) 363, 1067
AfaI GTAC 5 cut(s) 333, 549, 587, 769, 1172
AfiI CCNNNNNNNGG 1 cut(s) 347
AflIII ACRYGT 2 cut(s) 1032, 1239
AgsI TTSAA 3 cut(s) 155, 644, 1457
AhlI ACTAGT 1 cut(s) 1541
AjnI CCWGG 5 cut(s) 340, 558, 897, 1186, 1492
AjuI GAANNNNNNNTTGG 2 cut(s) 645, 677
AluBI AGCT 7 cut(s) 15, 158, 185, 750, 839, 882, 1156
AluI AGCT 7 cut(s) 15, 158, 185, 750, 839, 882, 1156
Alw21I GWGCWC 3 cut(s) 17, 853, 1063
Alw26I GTCTC 2 cut(s) 253, 1321
Alw44I GTGCAC 1 cut(s) 1059
AlwI GGATC 1 cut(s) 1302
AoxI GGCC 6 cut(s) 51, 101, 371, 561, 614, 1284
ApaLI GTGCAC 1 cut(s) 1059
ApeKI GCWGC 1 cut(s) 185
ApoI RAATTY 3 cut(s) 1197, 1507, 1556
AseI ATTAAT 1 cut(s) 1164
AspS9I GGNCC 4 cut(s) 101, 338, 371, 673
AsuHPI GGTGA 3 cut(s) 200, 250, 1334
AsuII TTCGAA 2 cut(s) 858, 1551
AvaII GGWCC 2 cut(s) 338, 673
BaeGI GKGCMC 1 cut(s) 1063
BalI TGGCCA 3 cut(s) 563, 616, 1286
BanII GRGCYC 1 cut(s) 17
BauI CACGAG 1 cut(s) 690
BbsI GAAGAC 2 cut(s) 402, 561
Bbv12I GWGCWC 3 cut(s) 17, 853, 1063
BbvI GCAGC 1 cut(s) 172
BccI CCATC 8 cut(s) 341, 382, 494, 606, 778, 1186, 1244, 1394
BceAI ACGGC 1 cut(s) 38
BcgI CGANNNNNNTGC 4 cut(s) 233, 267, 893, 927
BciT130I CCWGG 5 cut(s) 342, 560, 899, 1188, 1494
BciVI GTATCC 1 cut(s) 988
BcoDI GTCTC 2 cut(s) 253, 1321
BcuI ACTAGT 1 cut(s) 1541
BfaI CTAG 3 cut(s) 747, 1533, 1542
BfuAI ACCTGC 1 cut(s) 1387
BfuI GTATCC 1 cut(s) 988
BglI GCCNNNNNGGC 1 cut(s) 607
BisI GCNGC 1 cut(s) 186
BlsI GCNGC 1 cut(s) 187
Bme1390I CCNGG 5 cut(s) 342, 560, 899, 1188, 1494
Bme18I GGWCC 2 cut(s) 338, 673
BmgT120I GGNCC 4 cut(s) 101, 338, 371, 673
BmiI GGNNCC 4 cut(s) 102, 674, 675, 1491
BmrFI CCNGG 5 cut(s) 342, 560, 899, 1188, 1494
BmsI GCATC 5 cut(s) 277, 457, 1391, 1421, 1489
BpiI GAAGAC 2 cut(s) 402, 561
BpmI CTGGAG 5 cut(s) 881, 1401, 1500, 1508, 1515
Bpu14I TTCGAA 2 cut(s) 858, 1551
Bsa29I ATCGAT 1 cut(s) 594
BsaAI YACGTR 2 cut(s) 1035, 1240
BsaJI CCNNGG 3 cut(s) 54, 341, 1187
BsaWI WCCGGW 1 cut(s) 696
Bsc4I CCNNNNNNNGG 1 cut(s) 347
Bse1I ACTGG 3 cut(s) 458, 834, 1491
BseBI CCWGG 5 cut(s) 342, 560, 899, 1188, 1494
BseCI ATCGAT 1 cut(s) 594
BseDI CCNNGG 3 cut(s) 54, 341, 1187
BseGI GGATG 5 cut(s) 292, 352, 655, 1197, 1382
BseLI CCNNNNNNNGG 1 cut(s) 347
BseMII CTCAG 2 cut(s) 30, 807
BseNI ACTGG 3 cut(s) 458, 834, 1491
BseRI GAGGAG 1 cut(s) 212
BseSI GKGCMC 1 cut(s) 1063
BseXI GCAGC 1 cut(s) 172
BseYI CCCAGC 2 cut(s) 158, 948
BshFI GGCC 6 cut(s) 53, 103, 373, 563, 616, 1286
BshVI ATCGAT 1 cut(s) 594
BsiHKAI GWGCWC 3 cut(s) 17, 853, 1063
BsiSI CCGG 2 cut(s) 697, 1367
BslFI GGGAC 3 cut(s) 686, 1150, 1324
BslI CCNNNNNNNGG 1 cut(s) 347
BsmAI GTCTC 2 cut(s) 253, 1321
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 3 cut(s) 686, 1150, 1324
BsnI GGCC 6 cut(s) 53, 103, 373, 563, 616, 1286
Bsp119I TTCGAA 2 cut(s) 858, 1551
Bsp1286I GDGCHC 3 cut(s) 17, 853, 1063
Bsp1407I TGTACA 2 cut(s) 585, 1170
Bsp143I GATC 4 cut(s) 271, 928, 1294, 1348
BspACI CCGC 2 cut(s) 98, 991
BspANI GGCC 6 cut(s) 53, 103, 373, 563, 616, 1286
BspCNI CTCAG 2 cut(s) 29, 808
BspDI ATCGAT 1 cut(s) 594
BspHI TCATGA 2 cut(s) 780, 1297
BspLI GGNNCC 4 cut(s) 102, 674, 675, 1491
BspMI ACCTGC 1 cut(s) 1387
BspPI GGATC 1 cut(s) 1302
BspQI GCTCTTC 1 cut(s) 303
BspT104I TTCGAA 2 cut(s) 858, 1551
BsrBI CCGCTC 1 cut(s) 991
BsrGI TGTACA 2 cut(s) 585, 1170
BsrI ACTGG 3 cut(s) 458, 834, 1491
BssECI CCNNGG 3 cut(s) 54, 341, 1187
BssMI GATC 4 cut(s) 271, 928, 1294, 1348
BssSI CACGAG 1 cut(s) 690
Bst2BI CACGAG 1 cut(s) 690
Bst2UI CCWGG 5 cut(s) 342, 560, 899, 1188, 1494
Bst4CI ACNGT 5 cut(s) 389, 1056, 1067, 1141, 1272
Bst6I CTCTTC 4 cut(s) 171, 303, 639, 1337
BstAPI GCANNNNNTGC 2 cut(s) 1067, 1409
BstAUI TGTACA 2 cut(s) 585, 1170
BstBAI YACGTR 2 cut(s) 1035, 1240
BstBI TTCGAA 2 cut(s) 858, 1551
BstC8I GCNNGC 3 cut(s) 6, 51, 936
BstDEI CTNAG 3 cut(s) 16, 816, 840
BstDSI CCRYGG 1 cut(s) 54
BstF5I GGATG 5 cut(s) 292, 352, 655, 1197, 1382
BstKTI GATC 4 cut(s) 274, 931, 1297, 1351
BstMAI GTCTC 2 cut(s) 253, 1321
BstMBI GATC 4 cut(s) 271, 928, 1294, 1348
BstMWI GCNNNNNNNGC 5 cut(s) 607, 796, 1067, 1093, 1409
BstNI CCWGG 5 cut(s) 342, 560, 899, 1188, 1494
BstSCI CCNGG 5 cut(s) 340, 558, 897, 1186, 1492
BstSLI GKGCMC 1 cut(s) 1063
BstV1I GCAGC 1 cut(s) 172
BstV2I GAAGAC 2 cut(s) 402, 561
BstXI CCANNNNNNTGG 1 cut(s) 1282
Bsu15I ATCGAT 1 cut(s) 594
BsuI GTATCC 1 cut(s) 988
BsuRI GGCC 6 cut(s) 53, 103, 373, 563, 616, 1286
BsuTUI ATCGAT 1 cut(s) 594
BtgI CCRYGG 1 cut(s) 54
BtgZI GCGATG 2 cut(s) 23, 625
BtsCI GGATG 5 cut(s) 292, 352, 655, 1197, 1382
BtsIMutI CAGTG 2 cut(s) 1061, 1072
BveI ACCTGC 1 cut(s) 1387
Cac8I GCNNGC 3 cut(s) 6, 51, 936
CciI TCATGA 2 cut(s) 780, 1297
Cfr13I GGNCC 4 cut(s) 101, 338, 371, 673
ClaI ATCGAT 1 cut(s) 594
Csp6I GTAC 5 cut(s) 332, 548, 586, 768, 1171
CviAII CATG 6 cut(s) 335, 781, 800, 1211, 1298, 1537
CviQI GTAC 5 cut(s) 332, 548, 586, 768, 1171
DdeI CTNAG 3 cut(s) 16, 816, 840
DpnI GATC 4 cut(s) 273, 930, 1296, 1350
DpnII GATC 4 cut(s) 271, 928, 1294, 1348
DraI TTTAAA 1 cut(s) 877
DraIII CACNNNGTG 2 cut(s) 363, 1067
EaeI YGGCCR 3 cut(s) 561, 614, 1284
Eam1104I CTCTTC 4 cut(s) 171, 303, 639, 1337
EarI CTCTTC 4 cut(s) 171, 303, 639, 1337
Ecl136II GAGCTC 1 cut(s) 15
Eco24I GRGCYC 1 cut(s) 17
Eco47I GGWCC 2 cut(s) 338, 673
Eco53kI GAGCTC 1 cut(s) 15
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 673
EcoRII CCWGG 5 cut(s) 340, 558, 897, 1186, 1492
EcoT38I GRGCYC 1 cut(s) 17
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 6 cut(s) 338, 784, 803, 1214, 1301, 1540
FalI AAGNNNNNCTT 4 cut(s) 131, 163, 147, 179
FaqI GGGAC 3 cut(s) 686, 1150, 1324
FatI CATG 6 cut(s) 334, 780, 799, 1210, 1297, 1536
FauI CCCGC 2 cut(s) 91, 984
FauNDI CATATG 1 cut(s) 708
FblI GTMKAC 1 cut(s) 903
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 5 cut(s) 299, 359, 662, 1204, 1369
FriOI GRGCYC 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 3 cut(s) 747, 1533, 1542
GluI GCNGC 1 cut(s) 186
GsaI CCCAGC 2 cut(s) 162, 952
GsuI CTGGAG 5 cut(s) 881, 1401, 1500, 1508, 1515
HaeIII GGCC 6 cut(s) 53, 103, 373, 563, 616, 1286
HapII CCGG 2 cut(s) 697, 1367
Hin1II CATG 6 cut(s) 338, 784, 803, 1214, 1301, 1540
HincII GTYRAC 2 cut(s) 385, 904
HindII GTYRAC 2 cut(s) 385, 904
HinfI GANTC 5 cut(s) 110, 700, 777, 956, 1457
HpaII CCGG 2 cut(s) 697, 1367
HphI GGTGA 3 cut(s) 200, 250, 1334
Hpy166II GTNNAC 4 cut(s) 385, 904, 1061, 1259
Hpy188I TCNGA 5 cut(s) 19, 115, 123, 776, 817
Hpy188III TCNNGA 8 cut(s) 464, 692, 781, 1247, 1275, 1298, 1418, 1479
Hpy8I GTNNAC 4 cut(s) 385, 904, 1061, 1259
HpyCH4III ACNGT 5 cut(s) 389, 1056, 1067, 1141, 1272
HpyCH4IV ACGT 4 cut(s) 1034, 1239, 1472, 1527
HpyCH4V TGCA 9 cut(s) 4, 415, 454, 728, 914, 1061, 1087, 1382, 1412
HpyF10VI GCNNNNNNNGC 5 cut(s) 607, 796, 1067, 1093, 1409
HpyF3I CTNAG 3 cut(s) 16, 816, 840
HpySE526I ACGT 4 cut(s) 1034, 1239, 1472, 1527
Hsp92II CATG 6 cut(s) 338, 784, 803, 1214, 1301, 1540
KflI GGGWCCC 1 cut(s) 673
Kzo9I GATC 4 cut(s) 271, 928, 1294, 1348
LguI GCTCTTC 1 cut(s) 303
LmnI GCTCC 2 cut(s) 787, 1489
Lsp1109I GCAGC 1 cut(s) 172
LweI GCATC 5 cut(s) 277, 457, 1391, 1421, 1489
MaeI CTAG 3 cut(s) 747, 1533, 1542
MaeII ACGT 4 cut(s) 1034, 1239, 1472, 1527
MaeIII GTNAC 6 cut(s) 76, 442, 532, 692, 1008, 1528
MalI GATC 4 cut(s) 273, 930, 1296, 1350
MbiI CCGCTC 1 cut(s) 991
MboI GATC 4 cut(s) 271, 928, 1294, 1348
MboII GAAGA 9 cut(s) 188, 197, 290, 407, 449, 566, 656, 1313, 1354
MhlI GDGCHC 3 cut(s) 17, 853, 1063
MlsI TGGCCA 3 cut(s) 563, 616, 1286
MluCI AATT 7 cut(s) 213, 714, 1174, 1197, 1336, 1507, 1556
MluNI TGGCCA 3 cut(s) 563, 616, 1286
MlyI GAGTC 2 cut(s) 694, 786
Mox20I TGGCCA 3 cut(s) 563, 616, 1286
MscI TGGCCA 3 cut(s) 563, 616, 1286
MseI TTAA 6 cut(s) 137, 228, 492, 876, 1152, 1164
MslI CAYNNNNRTG 2 cut(s) 1035, 1166
Msp20I TGGCCA 3 cut(s) 563, 616, 1286
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 2 cut(s) 697, 1367
MspR9I CCNGG 5 cut(s) 342, 560, 899, 1188, 1494
MvaI CCWGG 5 cut(s) 342, 560, 899, 1188, 1494
MwoI GCNNNNNNNGC 5 cut(s) 607, 796, 1067, 1093, 1409
NdeI CATATG 1 cut(s) 708
NdeII GATC 4 cut(s) 271, 928, 1294, 1348
NlaIII CATG 6 cut(s) 338, 784, 803, 1214, 1301, 1540
NlaIV GGNNCC 4 cut(s) 102, 674, 675, 1491
NmuCI GTSAC 3 cut(s) 76, 442, 692
NspV TTCGAA 2 cut(s) 858, 1551
PagI TCATGA 2 cut(s) 780, 1297
PciSI GCTCTTC 1 cut(s) 303
PcsI WCGNNNNNNNCGW 1 cut(s) 259
PfeI GAWTC 3 cut(s) 110, 956, 1457
PkrI GCNGC 1 cut(s) 187
PleI GAGTC 2 cut(s) 694, 785
PpsI GAGTC 2 cut(s) 694, 785
Ppu21I YACGTR 2 cut(s) 1035, 1240
PpuMI RGGWCCY 1 cut(s) 673
PshBI ATTAAT 1 cut(s) 1164
PsiI TTATAA 1 cut(s) 719
Psp124BI GAGCTC 1 cut(s) 17
Psp1406I AACGTT 2 cut(s) 1472, 1527
Psp5II RGGWCCY 1 cut(s) 673
Psp6I CCWGG 5 cut(s) 340, 558, 897, 1186, 1492
PspFI CCCAGC 2 cut(s) 158, 948
PspGI CCWGG 5 cut(s) 340, 558, 897, 1186, 1492
PspN4I GGNNCC 4 cut(s) 102, 674, 675, 1491
PspPI GGNCC 4 cut(s) 101, 338, 371, 673
PspPPI RGGWCCY 1 cut(s) 673
PsrI GAACNNNNNNTAC 2 cut(s) 734, 766
RsaI GTAC 5 cut(s) 333, 549, 587, 769, 1172
RsaNI GTAC 5 cut(s) 332, 548, 586, 768, 1171
RseI CAYNNNNRTG 2 cut(s) 1035, 1166
SacI GAGCTC 1 cut(s) 17
SalI GTCGAC 1 cut(s) 902
SapI GCTCTTC 1 cut(s) 303
SaqAI TTAA 6 cut(s) 137, 228, 492, 876, 1152, 1164
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 4 cut(s) 271, 928, 1294, 1348
Sau96I GGNCC 4 cut(s) 101, 338, 371, 673
SchI GAGTC 2 cut(s) 694, 786
ScrFI CCNGG 5 cut(s) 342, 560, 899, 1188, 1494
SduI GDGCHC 3 cut(s) 17, 853, 1063
SfaNI GCATC 5 cut(s) 277, 457, 1391, 1421, 1489
SfuI TTCGAA 2 cut(s) 858, 1551
SinI GGWCC 2 cut(s) 338, 673
SmiMI CAYNNNNRTG 2 cut(s) 1035, 1166
SpeI ACTAGT 1 cut(s) 1541
Sse9I AATT 7 cut(s) 213, 714, 1174, 1197, 1336, 1507, 1556
SsiI CCGC 2 cut(s) 98, 991
SspMI CTAG 3 cut(s) 747, 1533, 1542
SstI GAGCTC 1 cut(s) 17
StyD4I CCNGG 5 cut(s) 340, 558, 897, 1186, 1492
TaaI ACNGT 5 cut(s) 389, 1056, 1067, 1141, 1272
TaiI ACGT 4 cut(s) 1037, 1242, 1475, 1530
TaqI TCGA 6 cut(s) 498, 513, 594, 858, 903, 1551
TasI AATT 7 cut(s) 213, 714, 1174, 1197, 1336, 1507, 1556
TatI WGTACW 2 cut(s) 585, 1170
TfiI GAWTC 3 cut(s) 110, 956, 1457
Tru1I TTAA 6 cut(s) 137, 228, 492, 876, 1152, 1164
Tru9I TTAA 6 cut(s) 137, 228, 492, 876, 1152, 1164
TscAI CASTG 2 cut(s) 1061, 1072
TseFI GTSAC 3 cut(s) 76, 442, 692
TseI GCWGC 1 cut(s) 185
Tsp45I GTSAC 3 cut(s) 76, 442, 692
TspDTI ATGAA 5 cut(s) 183, 500, 666, 755, 1314
TspRI CASTG 2 cut(s) 1061, 1072
VneI GTGCAC 1 cut(s) 1059
VpaK11BI GGWCC 2 cut(s) 338, 673
VspI ATTAAT 1 cut(s) 1164
XapI RAATTY 3 cut(s) 1197, 1507, 1556
XmiI GTMKAC 1 cut(s) 903
XspI CTAG 3 cut(s) 747, 1533, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.