Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003342.1

Orthogroup ID

OG0000312

Physical Location & Seq

Genomic Coordinates Reverse (-)

116634 .. 120810

Gene Structure 4177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003342.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

atgagctcagaggggttgagtgcttcgccacagcctacgcaggccgtggtcggtaagcaatacggagtgacaaagccacttttgacagcggggccaactgaatccgatattcagagaactttggagttaaagaagttcttggttgaagctgggctttatgaaagcgaagaggaagctgccaagagagaggaggttcttcaccgaattgggcagattgttaaggattgggtgaagcaacttactcggttgagacgatacacagatcaaatggttgaggatgctaatgctcttatttttacatttggttcgtataggcttggggtacatggtcctggggacgggatagacacattgtgtgttgggccatcttatgtcaaccgtgaggaagacttctttattgtattgcacgacactctggctgaaatggaagaagtgactgaactgcaaccagttccagatgcttatgttcccgtaatgaagtttaagttcgatggaatatcaatcgacctcctttatacaagtgttagtctgttggttgtaccagaagacctggccatttctgatgtatctctgttgtacaacatcgatgagcctactgttcgaagtcttaatggctgcagggatgctgatcaaattcttaagcttgttccaaatgttgaggttattggatttcttggtggtgtgaactgggctctcctcgttgcccgagtgtgtcaactttatcctaatgcagttcctagcgtgctggtttctcgattttttagagtctacacacagtggcgatggccaaatcctgtcatgttatgtgccattgaagaggatgaacttggttttggtgtttgggacccacgcaaaaatcctcgcgaccggactcatcatatgccaattataactcctgcatacccttgtatgaactctagctacaatgtttctaaaagtaccctccgagtcatgatggagcagtttcagcatgggaacaagatttctgaggaaatagaactggataaagctaagtggtgtgctctgttcgaaccatatttgttcttcaaaagctataagaactatatccaggtcgacatagttgcagttgacgttgatgatctgcgtgcttggaaaggctgggtggaatctcggttgaggaaacttacgctaatgattgagcgggatactatggagatgttacaatgccacccatatcctcacacgtatgttgataaaaccaaacactgtgcacacagtggtttctatatgggtttgcagaggaagcagggggataaggttcagggtcagcagtttgatataagagggacagttgatgagtttaagctgtccattaatatgtacaatttttggaaacctgggatggaaatttacctttctcatgttcgtagaagccaacttcctttttacgtgtttcctgatggtagtaaacgacctatacagtccagagttttggccaagcagcatgatcatgaagttagtggggcgagttctggtgagagacacctaaattggaagagtgatcttggtgggggttcgccggagaaacaacctgcatccatcatcacttacaaagcaggaagtacatctccagagattttggataaatgtgttggtgtggaggtagttgaatcaaataaaataacgttgtctggagaactggagcctggtgatggctcaaattccattgttattacaaacgttactagcatgactagtgttttcgaaaaatttggtatatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0070566 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

580

Amino Acids

65.64

Weight (kDa)

5.57

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca	FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica	MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica	Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis	pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis	RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata	RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora	Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii	Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa	Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha	Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana	Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	890
Acc36I	ACCTGC	1 cut(s)	1561
AccBSI	CCGCTC	1 cut(s)	1162
AccI	GTMKAC	2 cut(s)	768, 1074
AccII	CGCG	1 cut(s)	864
AciI	CCGC	2 cut(s)	89, 1162
AclI	AACGTT	2 cut(s)	1646, 1701
AcoI	YGGCCR	3 cut(s)	552, 785, 1455
AcsI	RAATTY	4 cut(s)	633, 1368, 1681, 1730
AdeI	CACNNNGTG	3 cut(s)	354, 777, 1238
AfaI	GTAC	6 cut(s)	324, 540, 578, 940, 1343, 1585
AfiI	CCNNNNNNNGG	2 cut(s)	338, 1673
AflII	CTTAAG	1 cut(s)	638
AflIII	ACRYGT	2 cut(s)	1203, 1410
AgsI	TTSAA	4 cut(s)	146, 815, 1048, 1631
AhlI	ACTAGT	1 cut(s)	1715
AjnI	CCWGG	5 cut(s)	331, 549, 1068, 1357, 1666
AjuI	GAANNNNNNNTTGG	2 cut(s)	816, 848
AluBI	AGCT	8 cut(s)	6, 149, 176, 643, 921, 1010, 1053, 1327
AluI	AGCT	8 cut(s)	6, 149, 176, 643, 921, 1010, 1053, 1327
Alw21I	GWGCWC	3 cut(s)	8, 1024, 1234
Alw26I	GTCTC	2 cut(s)	244, 1495
Alw44I	GTGCAC	1 cut(s)	1230
Ama87I	CYCGRG	1 cut(s)	705
AoxI	GGCC	6 cut(s)	42, 92, 362, 552, 785, 1455
ApaLI	GTGCAC	1 cut(s)	1230
ApeKI	GCWGC	3 cut(s)	176, 615, 1462
ApoI	RAATTY	4 cut(s)	633, 1368, 1681, 1730
AseI	ATTAAT	1 cut(s)	1335
AspS9I	GGNCC	4 cut(s)	92, 329, 362, 844
AsuHPI	GGTGA	4 cut(s)	191, 241, 1508, 1682
AsuII	TTCGAA	3 cut(s)	601, 1029, 1725
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	2 cut(s)	329, 844
BaeGI	GKGCMC	1 cut(s)	1234
BalI	TGGCCA	3 cut(s)	554, 787, 1457
BanII	GRGCYC	2 cut(s)	8, 694
BbsI	GAAGAC	2 cut(s)	393, 552
Bbv12I	GWGCWC	3 cut(s)	8, 1024, 1234
BbvI	GCAGC	3 cut(s)	163, 602, 1474
BccI	CCATC	8 cut(s)	373, 485, 777, 949, 1357, 1415, 1568, 1667
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 1064, 1098
BciT130I	CCWGG	5 cut(s)	333, 551, 1070, 1359, 1668
BciVI	GTATCC	1 cut(s)	1159
BclI	TGATCA	2 cut(s)	628, 1468
BcoDI	GTCTC	2 cut(s)	244, 1495
BcuI	ACTAGT	1 cut(s)	1715
BfaI	CTAG	4 cut(s)	738, 918, 1707, 1716
BfmI	CTRYAG	1 cut(s)	616
BfrI	CTTAAG	1 cut(s)	638
BfuAI	ACCTGC	1 cut(s)	1561
BfuI	GTATCC	1 cut(s)	1159
BisI	GCNGC	3 cut(s)	177, 616, 1463
BlsI	GCNGC	3 cut(s)	178, 617, 1464
Bme1390I	CCNGG	5 cut(s)	333, 551, 1070, 1359, 1668
Bme18I	GGWCC	2 cut(s)	329, 844
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	4 cut(s)	92, 329, 362, 844
BmiI	GGNNCC	4 cut(s)	93, 845, 846, 1665
BmrFI	CCNGG	5 cut(s)	333, 551, 1070, 1359, 1668
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	4 cut(s)	268, 448, 613, 1565
BmuI	ACTGGG	1 cut(s)	697
BpiI	GAAGAC	2 cut(s)	393, 552
BpmI	CTGGAG	3 cut(s)	1575, 1674, 1682
Bpu14I	TTCGAA	3 cut(s)	601, 1029, 1725
Bsa29I	ATCGAT	1 cut(s)	585
BsaAI	YACGTR	2 cut(s)	1206, 1411
BsaBI	GATNNNNATC	1 cut(s)	627
BsaJI	CCNNGG	3 cut(s)	45, 332, 1358
BsaWI	WCCGGW	1 cut(s)	867
Bsc4I	CCNNNNNNNGG	2 cut(s)	338, 1673
Bse1I	ACTGG	4 cut(s)	449, 692, 1005, 1665
Bse8I	GATNNNNATC	1 cut(s)	627
BseBI	CCWGG	5 cut(s)	333, 551, 1070, 1359, 1668
BseCI	ATCGAT	1 cut(s)	585
BseDI	CCNNGG	3 cut(s)	45, 332, 1358
BseGI	GGATG	5 cut(s)	283, 628, 826, 1368, 1556
BseJI	GATNNNNATC	1 cut(s)	627
BseLI	CCNNNNNNNGG	2 cut(s)	338, 1673
BseMII	CTCAG	2 cut(s)	21, 978
BseNI	ACTGG	4 cut(s)	449, 692, 1005, 1665
BseRI	GAGGAG	2 cut(s)	203, 686
BseSI	GKGCMC	1 cut(s)	1234
BseXI	GCAGC	3 cut(s)	163, 602, 1474
BseYI	CCCAGC	2 cut(s)	149, 1119
Bsh1236I	CGCG	1 cut(s)	864
Bsh1285I	CGRYCG	1 cut(s)	868
BshFI	GGCC	6 cut(s)	44, 94, 364, 554, 787, 1457
BshVI	ATCGAT	1 cut(s)	585
BsiEI	CGRYCG	1 cut(s)	868
BsiHKAI	GWGCWC	3 cut(s)	8, 1024, 1234
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	2 cut(s)	868, 1541
BslFI	GGGAC	3 cut(s)	350, 857, 1321
BslI	CCNNNNNNNGG	2 cut(s)	338, 1673
BsmAI	GTCTC	2 cut(s)	244, 1495
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	3 cut(s)	350, 857, 1321
BsnI	GGCC	6 cut(s)	44, 94, 364, 554, 787, 1457
BsoBI	CYCGRG	1 cut(s)	705
Bsp119I	TTCGAA	3 cut(s)	601, 1029, 1725
Bsp1286I	GDGCHC	4 cut(s)	8, 694, 1024, 1234
Bsp1407I	TGTACA	2 cut(s)	576, 1341
Bsp143I	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
Bsp68I	TCGCGA	1 cut(s)	864
BspACI	CCGC	2 cut(s)	89, 1162
BspANI	GGCC	6 cut(s)	44, 94, 364, 554, 787, 1457
BspCNI	CTCAG	2 cut(s)	20, 979
BspDI	ATCGAT	1 cut(s)	585
BspFNI	CGCG	1 cut(s)	864
BspHI	TCATGA	2 cut(s)	951, 1471
BspLI	GGNNCC	4 cut(s)	93, 845, 846, 1665
BspMAI	CTGCAG	1 cut(s)	620
BspMI	ACCTGC	1 cut(s)	1561
BspT104I	TTCGAA	3 cut(s)	601, 1029, 1725
BspTI	CTTAAG	1 cut(s)	638
BsrBI	CCGCTC	1 cut(s)	1162
BsrGI	TGTACA	2 cut(s)	576, 1341
BsrI	ACTGG	4 cut(s)	449, 692, 1005, 1665
BssECI	CCNNGG	3 cut(s)	45, 332, 1358
BssMI	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
Bst2UI	CCWGG	5 cut(s)	333, 551, 1070, 1359, 1668
Bst4CI	ACNGT	7 cut(s)	380, 598, 777, 1229, 1238, 1312, 1443
Bst6I	CTCTTC	3 cut(s)	162, 810, 1511
BstAFI	CTTAAG	1 cut(s)	638
BstAUI	TGTACA	2 cut(s)	576, 1341
BstBAI	YACGTR	2 cut(s)	1206, 1411
BstBI	TTCGAA	3 cut(s)	601, 1029, 1725
BstC8I	GCNNGC	3 cut(s)	42, 743, 1107
BstDEI	CTNAG	3 cut(s)	7, 987, 1011
BstDSI	CCRYGG	1 cut(s)	45
BstF5I	GGATG	5 cut(s)	283, 628, 826, 1368, 1556
BstFNI	CGCG	1 cut(s)	864
BstKTI	GATC	5 cut(s)	265, 631, 1102, 1471, 1525
BstMAI	GTCTC	2 cut(s)	244, 1495
BstMBI	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
BstMCI	CGRYCG	1 cut(s)	868
BstMWI	GCNNNNNNNGC	2 cut(s)	967, 1264
BstNI	CCWGG	5 cut(s)	333, 551, 1070, 1359, 1668
BstSCI	CCNGG	5 cut(s)	331, 549, 1068, 1357, 1666
BstSFI	CTRYAG	1 cut(s)	616
BstSLI	GKGCMC	1 cut(s)	1234
BstUI	CGCG	1 cut(s)	864
BstV1I	GCAGC	3 cut(s)	163, 602, 1474
BstV2I	GAAGAC	2 cut(s)	393, 552
BstXI	CCANNNNNNTGG	1 cut(s)	1453
Bsu15I	ATCGAT	1 cut(s)	585
BsuI	GTATCC	1 cut(s)	1159
BsuRI	GGCC	6 cut(s)	44, 94, 364, 554, 787, 1457
BsuTUI	ATCGAT	1 cut(s)	585
BtgI	CCRYGG	1 cut(s)	45
BtgZI	GCGATG	1 cut(s)	796
BtsCI	GGATG	5 cut(s)	283, 628, 826, 1368, 1556
BtsIMutI	CAGTG	3 cut(s)	782, 1225, 1243
BtuMI	TCGCGA	1 cut(s)	864
BveI	ACCTGC	1 cut(s)	1561
Cac8I	GCNNGC	3 cut(s)	42, 743, 1107
CciI	TCATGA	2 cut(s)	951, 1471
Cfr13I	GGNCC	4 cut(s)	92, 329, 362, 844
ClaI	ATCGAT	1 cut(s)	585
Csp6I	GTAC	6 cut(s)	323, 539, 577, 939, 1342, 1584
CviAII	CATG	8 cut(s)	326, 799, 952, 971, 1382, 1466, 1472, 1711
CviQI	GTAC	6 cut(s)	323, 539, 577, 939, 1342, 1584
DdeI	CTNAG	3 cut(s)	7, 987, 1011
DpnI	GATC	5 cut(s)	264, 630, 1101, 1470, 1524
DpnII	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
DraIII	CACNNNGTG	3 cut(s)	354, 777, 1238
EaeI	YGGCCR	3 cut(s)	552, 785, 1455
Eam1104I	CTCTTC	3 cut(s)	162, 810, 1511
EarI	CTCTTC	3 cut(s)	162, 810, 1511
Ecl136II	GAGCTC	1 cut(s)	6
Eco24I	GRGCYC	2 cut(s)	8, 694
Eco47I	GGWCC	2 cut(s)	329, 844
Eco53kI	GAGCTC	1 cut(s)	6
Eco88I	CYCGRG	1 cut(s)	705
EcoICRI	GAGCTC	1 cut(s)	6
EcoO109I	RGGNCCY	1 cut(s)	844
EcoRII	CCWGG	5 cut(s)	331, 549, 1068, 1357, 1666
EcoT38I	GRGCYC	2 cut(s)	8, 694
Esp3I	CGTCTC	1 cut(s)	244
FaeI	CATG	8 cut(s)	329, 802, 955, 974, 1385, 1469, 1475, 1714
FalI	AAGNNNNNCTT	4 cut(s)	122, 154, 138, 170
FaqI	GGGAC	3 cut(s)	350, 857, 1321
FatI	CATG	8 cut(s)	325, 798, 951, 970, 1381, 1465, 1471, 1710
FauI	CCCGC	2 cut(s)	82, 1155
FauNDI	CATATG	1 cut(s)	879
FbaI	TGATCA	2 cut(s)	628, 1468
FblI	GTMKAC	2 cut(s)	768, 1074
Fnu4HI	GCNGC	3 cut(s)	177, 616, 1463
FokI	GGATG	5 cut(s)	290, 635, 833, 1375, 1543
FriOI	GRGCYC	2 cut(s)	8, 694
Fsp4HI	GCNGC	3 cut(s)	177, 616, 1463
FspBI	CTAG	4 cut(s)	738, 918, 1707, 1716
GluI	GCNGC	3 cut(s)	177, 616, 1463
GsaI	CCCAGC	2 cut(s)	153, 1123
GsuI	CTGGAG	3 cut(s)	1575, 1674, 1682
HaeIII	GGCC	6 cut(s)	44, 94, 364, 554, 787, 1457
HapII	CCGG	2 cut(s)	868, 1541
Hin1II	CATG	8 cut(s)	329, 802, 955, 974, 1385, 1469, 1475, 1714
HincII	GTYRAC	4 cut(s)	376, 716, 1075, 1090
HindII	GTYRAC	4 cut(s)	376, 716, 1075, 1090
HindIII	AAGCTT	1 cut(s)	641
HinfI	GANTC	6 cut(s)	101, 765, 871, 948, 1127, 1631
HpaII	CCGG	2 cut(s)	868, 1541
HphI	GGTGA	4 cut(s)	191, 241, 1508, 1682
Hpy166II	GTNNAC	8 cut(s)	376, 685, 716, 769, 1075, 1090, 1232, 1430
Hpy188I	TCNGA	6 cut(s)	10, 106, 114, 562, 947, 988
Hpy188III	TCNNGA	9 cut(s)	455, 753, 863, 952, 1418, 1446, 1472, 1592, 1653
Hpy8I	GTNNAC	8 cut(s)	376, 685, 716, 769, 1075, 1090, 1232, 1430
HpyCH4III	ACNGT	7 cut(s)	380, 598, 777, 1229, 1238, 1312, 1443
HpyCH4IV	ACGT	5 cut(s)	1092, 1205, 1410, 1646, 1701
HpyCH4V	TGCA	9 cut(s)	406, 445, 618, 731, 899, 1085, 1232, 1258, 1556
HpyF10VI	GCNNNNNNNGC	2 cut(s)	967, 1264
HpyF3I	CTNAG	3 cut(s)	7, 987, 1011
HpySE526I	ACGT	5 cut(s)	1092, 1205, 1410, 1646, 1701
Hsp92II	CATG	8 cut(s)	329, 802, 955, 974, 1385, 1469, 1475, 1714
KflI	GGGWCCC	1 cut(s)	844
Ksp22I	TGATCA	2 cut(s)	628, 1468
Kzo9I	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
LmnI	GCTCC	2 cut(s)	958, 1663
Lsp1109I	GCAGC	3 cut(s)	163, 602, 1474
LweI	GCATC	4 cut(s)	268, 448, 613, 1565
MaeI	CTAG	4 cut(s)	738, 918, 1707, 1716
MaeII	ACGT	5 cut(s)	1092, 1205, 1410, 1646, 1701
MaeIII	GTNAC	4 cut(s)	67, 433, 1179, 1702
MalI	GATC	5 cut(s)	264, 630, 1101, 1470, 1524
MbiI	CCGCTC	1 cut(s)	1162
MboI	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
MboII	GAAGA	8 cut(s)	179, 188, 398, 440, 557, 827, 1036, 1528
MhlI	GDGCHC	4 cut(s)	8, 694, 1024, 1234
MlsI	TGGCCA	3 cut(s)	554, 787, 1457
MluCI	AATT	8 cut(s)	204, 633, 885, 1345, 1368, 1510, 1681, 1730
MluNI	TGGCCA	3 cut(s)	554, 787, 1457
MlyI	GAGTC	3 cut(s)	774, 865, 957
Mox20I	TGGCCA	3 cut(s)	554, 787, 1457
MscI	TGGCCA	3 cut(s)	554, 787, 1457
MseI	TTAA	7 cut(s)	128, 219, 483, 609, 639, 1323, 1335
MslI	CAYNNNNRTG	3 cut(s)	1206, 1337, 1470
Msp20I	TGGCCA	3 cut(s)	554, 787, 1457
MspA1I	CMGCKG	1 cut(s)	89
MspCI	CTTAAG	1 cut(s)	638
MspI	CCGG	2 cut(s)	868, 1541
MspR9I	CCNGG	5 cut(s)	333, 551, 1070, 1359, 1668
MvaI	CCWGG	5 cut(s)	333, 551, 1070, 1359, 1668
MvnI	CGCG	1 cut(s)	864
MwoI	GCNNNNNNNGC	2 cut(s)	967, 1264
NdeI	CATATG	1 cut(s)	879
NdeII	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
NlaIII	CATG	8 cut(s)	329, 802, 955, 974, 1385, 1469, 1475, 1714
NlaIV	GGNNCC	4 cut(s)	93, 845, 846, 1665
NmuCI	GTSAC	2 cut(s)	67, 433
NruI	TCGCGA	1 cut(s)	864
NspV	TTCGAA	3 cut(s)	601, 1029, 1725
PagI	TCATGA	2 cut(s)	951, 1471
PcsI	WCGNNNNNNNCGW	1 cut(s)	250
PfeI	GAWTC	3 cut(s)	101, 1127, 1631
PkrI	GCNGC	3 cut(s)	178, 617, 1464
PleI	GAGTC	3 cut(s)	773, 865, 956
PpsI	GAGTC	3 cut(s)	773, 865, 956
Ppu21I	YACGTR	2 cut(s)	1206, 1411
PpuMI	RGGWCCY	1 cut(s)	844
PshBI	ATTAAT	1 cut(s)	1335
PsiI	TTATAA	1 cut(s)	890
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	2 cut(s)	1646, 1701
Psp5II	RGGWCCY	1 cut(s)	844
Psp6I	CCWGG	5 cut(s)	331, 549, 1068, 1357, 1666
PspFI	CCCAGC	2 cut(s)	149, 1119
PspGI	CCWGG	5 cut(s)	331, 549, 1068, 1357, 1666
PspN4I	GGNNCC	4 cut(s)	93, 845, 846, 1665
PspPI	GGNCC	4 cut(s)	92, 329, 362, 844
PspPPI	RGGWCCY	1 cut(s)	844
PsrI	GAACNNNNNNTAC	2 cut(s)	905, 937
PstI	CTGCAG	1 cut(s)	620
RruI	TCGCGA	1 cut(s)	864
RsaI	GTAC	6 cut(s)	324, 540, 578, 940, 1343, 1585
RsaNI	GTAC	6 cut(s)	323, 539, 577, 939, 1342, 1584
RseI	CAYNNNNRTG	3 cut(s)	1206, 1337, 1470
SacI	GAGCTC	1 cut(s)	8
SalI	GTCGAC	1 cut(s)	1073
SaqAI	TTAA	7 cut(s)	128, 219, 483, 609, 639, 1323, 1335
SatI	GCNGC	3 cut(s)	177, 616, 1463
Sau3AI	GATC	5 cut(s)	262, 628, 1099, 1468, 1522
Sau96I	GGNCC	4 cut(s)	92, 329, 362, 844
SchI	GAGTC	3 cut(s)	774, 865, 957
ScrFI	CCNGG	5 cut(s)	333, 551, 1070, 1359, 1668
SduI	GDGCHC	4 cut(s)	8, 694, 1024, 1234
SfaNI	GCATC	4 cut(s)	268, 448, 613, 1565
SfcI	CTRYAG	1 cut(s)	616
SfuI	TTCGAA	3 cut(s)	601, 1029, 1725
SinI	GGWCC	2 cut(s)	329, 844
SmiMI	CAYNNNNRTG	3 cut(s)	1206, 1337, 1470
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
SpeI	ACTAGT	1 cut(s)	1715
Sse9I	AATT	8 cut(s)	204, 633, 885, 1345, 1368, 1510, 1681, 1730
SsiI	CCGC	2 cut(s)	89, 1162
SspMI	CTAG	4 cut(s)	738, 918, 1707, 1716
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	5 cut(s)	331, 549, 1068, 1357, 1666
TaaI	ACNGT	7 cut(s)	380, 598, 777, 1229, 1238, 1312, 1443
TaiI	ACGT	5 cut(s)	1095, 1208, 1413, 1649, 1704
TaqI	TCGA	8 cut(s)	489, 504, 585, 601, 754, 1029, 1074, 1725
TasI	AATT	8 cut(s)	204, 633, 885, 1345, 1368, 1510, 1681, 1730
TatI	WGTACW	3 cut(s)	576, 1341, 1583
TfiI	GAWTC	3 cut(s)	101, 1127, 1631
Tru1I	TTAA	7 cut(s)	128, 219, 483, 609, 639, 1323, 1335
Tru9I	TTAA	7 cut(s)	128, 219, 483, 609, 639, 1323, 1335
TscAI	CASTG	3 cut(s)	782, 1232, 1243
TseFI	GTSAC	2 cut(s)	67, 433
TseI	GCWGC	3 cut(s)	176, 615, 1462
Tsp45I	GTSAC	2 cut(s)	67, 433
TspDTI	ATGAA	5 cut(s)	174, 491, 837, 926, 1488
TspGWI	ACGGA	1 cut(s)	78
TspRI	CASTG	3 cut(s)	782, 1232, 1243
Vha464I	CTTAAG	1 cut(s)	638
VneI	GTGCAC	1 cut(s)	1230
VpaK11BI	GGWCC	2 cut(s)	329, 844
VspI	ATTAAT	1 cut(s)	1335
XapI	RAATTY	4 cut(s)	633, 1368, 1681, 1730
XmiI	GTMKAC	2 cut(s)	768, 1074
XspI	CTAG	4 cut(s)	738, 918, 1707, 1716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.