Poly(A) polymerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAP_NTPase | PF20750 | 17 - 145 | 3e-43 | Poly(A) polymerase nucleotidyltransferase domain |
| NTP_transf_2 | PF01909 | 60 - 142 | 1.5e-09 | Nucleotidyltransferase domain |
| PAP_NTPase | PF20750 | 174 - 209 | 6.2e-12 | Poly(A) polymerase nucleotidyltransferase domain |
| PAP_central | PF04928 | 214 - 245 | 6.1e-11 | Poly(A) polymerase central domain |
| PAP_central | PF04928 | 255 - 298 | 2.8e-06 | Poly(A) polymerase central domain |
| PAP_RNA-bind | PF04926 | 302 - 360 | 2.4e-13 | Poly(A) polymerase predicted RNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 922 |
| Acc16I | TGCGCA | 1 cut(s) | 1095 |
| Acc36I | ACCTGC | 2 cut(s) | 922, 1475 |
| Acc65I | GGTACC | 1 cut(s) | 1589 |
| AccB1I | GGYRCC | 1 cut(s) | 1589 |
| AccBSI | CCGCTC | 1 cut(s) | 461 |
| AccI | GTMKAC | 4 cut(s) | 488, 520, 1070, 1543 |
| AccII | CGCG | 1 cut(s) | 687 |
| AciI | CCGC | 3 cut(s) | 461, 646, 687 |
| AclWI | GGATC | 3 cut(s) | 226, 534, 2083 |
| AcsI | RAATTY | 4 cut(s) | 392, 612, 1790, 2101 |
| AcuI | CTGAAG | 4 cut(s) | 884, 1028, 1501, 1854 |
| AfaI | GTAC | 5 cut(s) | 802, 1591, 1626, 1752, 1928 |
| AfeI | AGCGCT | 1 cut(s) | 1978 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1453, 1553, 1863 |
| AflII | CTTAAG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 2 cut(s) | 808, 1233 |
| AgsI | TTSAA | 8 cut(s) | 359, 397, 667, 893, 1015, 1638, 1676, 2110 |
| AjnI | CCWGG | 3 cut(s) | 244, 475, 1222 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 93, 125 |
| AleI | CACNNNNGTG | 1 cut(s) | 658 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1492, 1524 |
| AluBI | AGCT | 9 cut(s) | 251, 622, 761, 862, 1006, 1264, 1515, 2054, 2060 |
| AluI | AGCT | 9 cut(s) | 251, 622, 761, 862, 1006, 1264, 1515, 2054, 2060 |
| Alw21I | GWGCWC | 3 cut(s) | 642, 886, 1887 |
| Alw26I | GTCTC | 5 cut(s) | 796, 1020, 1305, 1724, 2124 |
| AlwI | GGATC | 3 cut(s) | 226, 534, 2083 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 529 |
| Aor51HI | AGCGCT | 1 cut(s) | 1978 |
| AoxI | GGCC | 4 cut(s) | 31, 242, 1358, 1412 |
| ApeKI | GCWGC | 4 cut(s) | 89, 114, 947, 1261 |
| ApoI | RAATTY | 4 cut(s) | 392, 612, 1790, 2101 |
| AseI | ATTAAT | 1 cut(s) | 1389 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 105 |
| Asp718I | GGTACC | 1 cut(s) | 1589 |
| AspLEI | GCGC | 3 cut(s) | 687, 1096, 1979 |
| AspS9I | GGNCC | 6 cut(s) | 31, 235, 242, 275, 1358, 1959 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 3 cut(s) | 154, 358, 1000 |
| AsuII | TTCGAA | 1 cut(s) | 580 |
| AvaII | GGWCC | 3 cut(s) | 235, 275, 1959 |
| BanI | GGYRCC | 1 cut(s) | 1589 |
| BbsI | GAAGAC | 1 cut(s) | 1270 |
| Bbv12I | GWGCWC | 3 cut(s) | 642, 886, 1887 |
| BbvI | GCAGC | 4 cut(s) | 76, 101, 959, 1273 |
| BccI | CCATC | 7 cut(s) | 175, 1059, 1222, 1280, 1639, 1676, 1901 |
| BceAI | ACGGC | 3 cut(s) | 18, 1585, 1938 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 560, 594 |
| BciT130I | CCWGG | 3 cut(s) | 246, 477, 1224 |
| BciVI | GTATCC | 1 cut(s) | 1477 |
| BclI | TGATCA | 1 cut(s) | 1942 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BcoDI | GTCTC | 5 cut(s) | 796, 1020, 1305, 1724, 2124 |
| BfaI | CTAG | 3 cut(s) | 1424, 1512, 2061 |
| BfmI | CTRYAG | 1 cut(s) | 929 |
| BfoI | RGCGCY | 1 cut(s) | 1980 |
| BfrI | CTTAAG | 1 cut(s) | 617 |
| BfuAI | ACCTGC | 2 cut(s) | 922, 1475 |
| BfuI | GTATCC | 1 cut(s) | 1477 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 165 |
| BisI | GCNGC | 5 cut(s) | 90, 115, 462, 948, 1262 |
| BlsI | GCNGC | 5 cut(s) | 91, 116, 463, 949, 1263 |
| BmcAI | AGTACT | 1 cut(s) | 802 |
| Bme1390I | CCNGG | 4 cut(s) | 30, 246, 477, 1224 |
| Bme18I | GGWCC | 3 cut(s) | 235, 275, 1959 |
| BmgT120I | GGNCC | 6 cut(s) | 31, 235, 242, 275, 1358, 1959 |
| BmiI | GGNNCC | 3 cut(s) | 236, 1591, 1868 |
| BmrFI | CCNGG | 4 cut(s) | 30, 246, 477, 1224 |
| BmrI | ACTGGG | 1 cut(s) | 148 |
| BmsI | GCATC | 5 cut(s) | 14, 181, 361, 943, 1088 |
| BmuI | ACTGGG | 1 cut(s) | 148 |
| BpiI | GAAGAC | 1 cut(s) | 1270 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 1721, 1753, 2104 |
| BpmI | CTGGAG | 3 cut(s) | 267, 1572, 2076 |
| Bpu14I | TTCGAA | 1 cut(s) | 580 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| BsaAI | YACGTR | 2 cut(s) | 809, 1169 |
| BsaI | GGTCTC | 1 cut(s) | 1305 |
| BsaJI | CCNNGG | 5 cut(s) | 238, 832, 1223, 1656, 2094 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1453, 1553, 1863 |
| Bse1I | ACTGG | 7 cut(s) | 143, 712, 874, 1555, 1747, 1914, 1988 |
| Bse3DI | GCAATG | 1 cut(s) | 565 |
| BseBI | CCWGG | 3 cut(s) | 246, 477, 1224 |
| BseDI | CCNNGG | 5 cut(s) | 238, 832, 1223, 1656, 2094 |
| BseGI | GGATG | 6 cut(s) | 196, 324, 1051, 1079, 1233, 1627 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1453, 1553, 1863 |
| BseMI | GCAATG | 1 cut(s) | 565 |
| BseMII | CTCAG | 3 cut(s) | 552, 670, 807 |
| BseNI | ACTGG | 7 cut(s) | 143, 712, 874, 1555, 1747, 1914, 1988 |
| BseRI | GAGGAG | 4 cut(s) | 311, 866, 1895, 1963 |
| BseXI | GCAGC | 4 cut(s) | 76, 101, 959, 1273 |
| BsgI | GTGCAG | 1 cut(s) | 1948 |
| Bsh1236I | CGCG | 1 cut(s) | 687 |
| BshFI | GGCC | 4 cut(s) | 33, 244, 1360, 1414 |
| BshNI | GGYRCC | 1 cut(s) | 1589 |
| BsiHKAI | GWGCWC | 3 cut(s) | 642, 886, 1887 |
| BsiSI | CCGG | 2 cut(s) | 29, 1255 |
| BslFI | GGGAC | 3 cut(s) | 365, 438, 1700 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1453, 1553, 1863 |
| BsmAI | GTCTC | 5 cut(s) | 796, 1020, 1305, 1724, 2124 |
| BsmFI | GGGAC | 3 cut(s) | 365, 438, 1700 |
| BsmI | GAATGC | 2 cut(s) | 1044, 1834 |
| BsnI | GGCC | 4 cut(s) | 33, 244, 1360, 1414 |
| Bso31I | GGTCTC | 1 cut(s) | 1305 |
| Bsp119I | TTCGAA | 1 cut(s) | 580 |
| Bsp1286I | GDGCHC | 3 cut(s) | 642, 886, 1887 |
| Bsp143I | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| Bsp19I | CCATGG | 2 cut(s) | 238, 832 |
| BspACI | CCGC | 3 cut(s) | 461, 646, 687 |
| BspANI | GGCC | 4 cut(s) | 33, 244, 1360, 1414 |
| BspCNI | CTCAG | 3 cut(s) | 551, 669, 806 |
| BspFNI | CGCG | 1 cut(s) | 687 |
| BspHI | TCATGA | 1 cut(s) | 387 |
| BspLI | GGNNCC | 3 cut(s) | 236, 1591, 1868 |
| BspMAI | CTGCAG | 1 cut(s) | 933 |
| BspMI | ACCTGC | 2 cut(s) | 922, 1475 |
| BspPI | GGATC | 3 cut(s) | 226, 534, 2083 |
| BspT104I | TTCGAA | 1 cut(s) | 580 |
| BspT107I | GGYRCC | 1 cut(s) | 1589 |
| BspTI | CTTAAG | 1 cut(s) | 617 |
| BspTNI | GGTCTC | 1 cut(s) | 1305 |
| BsrBI | CCGCTC | 1 cut(s) | 461 |
| BsrDI | GCAATG | 1 cut(s) | 565 |
| BsrI | ACTGG | 7 cut(s) | 143, 712, 874, 1555, 1747, 1914, 1988 |
| BssECI | CCNNGG | 5 cut(s) | 238, 832, 1223, 1656, 2094 |
| BssMI | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| BssNAI | GTATAC | 2 cut(s) | 489, 1071 |
| BssT1I | CCWWGG | 2 cut(s) | 238, 832 |
| Bst1107I | GTATAC | 2 cut(s) | 489, 1071 |
| Bst2UI | CCWGG | 3 cut(s) | 246, 477, 1224 |
| Bst4CI | ACNGT | 6 cut(s) | 279, 577, 1177, 1299, 1889, 2024 |
| Bst6I | CTCTTC | 4 cut(s) | 96, 336, 1602, 2105 |
| BstAFI | CTTAAG | 1 cut(s) | 617 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 953 |
| BstBAI | YACGTR | 2 cut(s) | 809, 1169 |
| BstBI | TTCGAA | 1 cut(s) | 580 |
| BstC8I | GCNNGC | 1 cut(s) | 1325 |
| BstDEI | CTNAG | 5 cut(s) | 538, 656, 793, 998, 2000 |
| BstDSI | CCRYGG | 3 cut(s) | 238, 832, 1656 |
| BstF5I | GGATG | 6 cut(s) | 196, 324, 1051, 1079, 1233, 1627 |
| BstFNI | CGCG | 1 cut(s) | 687 |
| BstH2I | RGCGCY | 1 cut(s) | 1980 |
| BstHHI | GCGC | 3 cut(s) | 687, 1096, 1979 |
| BstKTI | GATC | 7 cut(s) | 178, 221, 421, 529, 610, 1945, 2078 |
| BstMAI | GTCTC | 5 cut(s) | 796, 1020, 1305, 1724, 2124 |
| BstMBI | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 165, 684, 953, 1003, 1093, 1100 |
| BstNI | CCWGG | 3 cut(s) | 246, 477, 1224 |
| BstNSI | RCATGY | 3 cut(s) | 515, 1237, 1668 |
| BstSCI | CCNGG | 4 cut(s) | 28, 244, 475, 1222 |
| BstSFI | CTRYAG | 1 cut(s) | 929 |
| BstUI | CGCG | 1 cut(s) | 687 |
| BstV1I | GCAGC | 4 cut(s) | 76, 101, 959, 1273 |
| BstV2I | GAAGAC | 1 cut(s) | 1270 |
| BstX2I | RGATCY | 1 cut(s) | 526 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 245 |
| BstYI | RGATCY | 1 cut(s) | 526 |
| BstZ17I | GTATAC | 2 cut(s) | 489, 1071 |
| BsuI | GTATCC | 1 cut(s) | 1477 |
| BsuRI | GGCC | 4 cut(s) | 33, 244, 1360, 1414 |
| BtgI | CCRYGG | 3 cut(s) | 238, 832, 1656 |
| BtsCI | GGATG | 6 cut(s) | 196, 324, 1051, 1079, 1233, 1627 |
| BtsI | GCAGTG | 1 cut(s) | 2122 |
| BtsIMutI | CAGTG | 4 cut(s) | 881, 1052, 1907, 2122 |
| BveI | ACCTGC | 2 cut(s) | 922, 1475 |
| Cac8I | GCNNGC | 1 cut(s) | 1325 |
| CaiI | CAGNNNCTG | 1 cut(s) | 529 |
| CciI | TCATGA | 1 cut(s) | 387 |
| CfoI | GCGC | 3 cut(s) | 687, 1096, 1979 |
| Cfr13I | GGNCC | 6 cut(s) | 31, 235, 242, 275, 1358, 1959 |
| CseI | GACGC | 1 cut(s) | 1085 |
| Csp6I | GTAC | 5 cut(s) | 801, 1590, 1625, 1751, 1927 |
| CviQI | GTAC | 5 cut(s) | 801, 1590, 1625, 1751, 1927 |
| DdeI | CTNAG | 5 cut(s) | 538, 656, 793, 998, 2000 |
| DpnI | GATC | 7 cut(s) | 177, 220, 420, 528, 609, 1944, 2077 |
| DpnII | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| Eam1104I | CTCTTC | 4 cut(s) | 96, 336, 1602, 2105 |
| EarI | CTCTTC | 4 cut(s) | 96, 336, 1602, 2105 |
| Eco130I | CCWWGG | 2 cut(s) | 238, 832 |
| Eco31I | GGTCTC | 1 cut(s) | 1305 |
| Eco47I | GGWCC | 3 cut(s) | 235, 275, 1959 |
| Eco47III | AGCGCT | 1 cut(s) | 1978 |
| Eco57I | CTGAAG | 4 cut(s) | 884, 1028, 1501, 1854 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1959 |
| EcoRII | CCWGG | 3 cut(s) | 244, 475, 1222 |
| EcoT14I | CCWWGG | 2 cut(s) | 238, 832 |
| ErhI | CCWWGG | 2 cut(s) | 238, 832 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 93, 125 |
| FaqI | GGGAC | 3 cut(s) | 365, 438, 1700 |
| FauNDI | CATATG | 2 cut(s) | 283, 2035 |
| FbaI | TGATCA | 1 cut(s) | 1942 |
| FblI | GTMKAC | 4 cut(s) | 488, 520, 1070, 1543 |
| Fnu4HI | GCNGC | 5 cut(s) | 90, 115, 462, 948, 1262 |
| FokI | GGATG | 6 cut(s) | 203, 311, 1038, 1066, 1240, 1614 |
| Fsp4HI | GCNGC | 5 cut(s) | 90, 115, 462, 948, 1262 |
| FspAI | RTGCGCAY | 1 cut(s) | 1095 |
| FspBI | CTAG | 3 cut(s) | 1424, 1512, 2061 |
| FspI | TGCGCA | 1 cut(s) | 1095 |
| GlaI | GCGC | 3 cut(s) | 686, 1095, 1978 |
| GluI | GCNGC | 5 cut(s) | 90, 115, 462, 948, 1262 |
| GsuI | CTGGAG | 3 cut(s) | 267, 1572, 2076 |
| HaeII | RGCGCY | 1 cut(s) | 1980 |
| HaeIII | GGCC | 4 cut(s) | 33, 244, 1360, 1414 |
| HapII | CCGG | 2 cut(s) | 29, 1255 |
| HgaI | GACGC | 1 cut(s) | 1085 |
| HhaI | GCGC | 3 cut(s) | 687, 1096, 1979 |
| Hin6I | GCGC | 3 cut(s) | 685, 1094, 1977 |
| HinP1I | GCGC | 3 cut(s) | 685, 1094, 1977 |
| HincII | GTYRAC | 3 cut(s) | 521, 565, 1783 |
| HindII | GTYRAC | 3 cut(s) | 521, 565, 1783 |
| HindIII | AAGCTT | 1 cut(s) | 620 |
| HpaII | CCGG | 2 cut(s) | 29, 1255 |
| HphI | GGTGA | 3 cut(s) | 154, 358, 1000 |
| Hpy188III | TCNNGA | 9 cut(s) | 9, 293, 368, 388, 530, 1145, 1302, 1311, 1378 |
| Hpy99I | CGWCG | 1 cut(s) | 39 |
| HpyAV | CCTTC | 6 cut(s) | 58, 970, 1124, 1142, 1328, 1829 |
| HpyCH4III | ACNGT | 6 cut(s) | 279, 577, 1177, 1299, 1889, 2024 |
| HpyCH4IV | ACGT | 3 cut(s) | 212, 808, 1168 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 165, 684, 953, 1003, 1093, 1100 |
| HpyF3I | CTNAG | 5 cut(s) | 538, 656, 793, 998, 2000 |
| HpySE526I | ACGT | 3 cut(s) | 212, 808, 1168 |
| HspAI | GCGC | 3 cut(s) | 685, 1094, 1977 |
| KpnI | GGTACC | 1 cut(s) | 1593 |
| Ksp22I | TGATCA | 1 cut(s) | 1942 |
| Kzo9I | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| LmnI | GCTCC | 3 cut(s) | 248, 1882, 2057 |
| Lsp1109I | GCAGC | 4 cut(s) | 76, 101, 959, 1273 |
| LweI | GCATC | 5 cut(s) | 14, 181, 361, 943, 1088 |
| MaeI | CTAG | 3 cut(s) | 1424, 1512, 2061 |
| MaeII | ACGT | 3 cut(s) | 212, 808, 1168 |
| MaeIII | GTNAC | 3 cut(s) | 346, 703, 1990 |
| MalI | GATC | 7 cut(s) | 177, 220, 420, 528, 609, 1944, 2077 |
| MbiI | CCGCTC | 1 cut(s) | 461 |
| MboI | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| MfeI | CAATTG | 4 cut(s) | 149, 414, 1571, 1873 |
| MflI | RGATCY | 1 cut(s) | 526 |
| MhlI | GDGCHC | 3 cut(s) | 642, 886, 1887 |
| MlyI | GAGTC | 3 cut(s) | 1469, 1730, 2126 |
| MmeI | TCCRAC | 3 cut(s) | 253, 486, 1934 |
| MroXI | GAANNNNTTC | 1 cut(s) | 105 |
| MseI | TTAA | 4 cut(s) | 618, 1389, 1844, 2066 |
| MslI | CAYNNNNRTG | 1 cut(s) | 658 |
| MspCI | CTTAAG | 1 cut(s) | 617 |
| MspI | CCGG | 2 cut(s) | 29, 1255 |
| MspR9I | CCNGG | 4 cut(s) | 30, 246, 477, 1224 |
| MunI | CAATTG | 4 cut(s) | 149, 414, 1571, 1873 |
| Mva1269I | GAATGC | 2 cut(s) | 1044, 1834 |
| MvaI | CCWGG | 3 cut(s) | 246, 477, 1224 |
| MvnI | CGCG | 1 cut(s) | 687 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 165, 684, 953, 1003, 1093, 1100 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NcoI | CCATGG | 2 cut(s) | 238, 832 |
| NdeI | CATATG | 2 cut(s) | 283, 2035 |
| NdeII | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| NlaIV | GGNNCC | 3 cut(s) | 236, 1591, 1868 |
| NmeAIII | GCCGAG | 3 cut(s) | 973, 1440, 2119 |
| NmuCI | GTSAC | 1 cut(s) | 346 |
| NsbI | TGCGCA | 1 cut(s) | 1095 |
| NspI | RCATGY | 3 cut(s) | 515, 1237, 1668 |
| NspV | TTCGAA | 1 cut(s) | 580 |
| OliI | CACNNNNGTG | 1 cut(s) | 658 |
| PagI | TCATGA | 1 cut(s) | 387 |
| PaqCI | CACCTGC | 1 cut(s) | 922 |
| PciI | ACATGT | 1 cut(s) | 1233 |
| PctI | GAATGC | 2 cut(s) | 1044, 1834 |
| PdmI | GAANNNNTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 7 cut(s) | 59, 289, 472, 545, 989, 1349, 1652 |
| PkrI | GCNGC | 5 cut(s) | 91, 116, 463, 949, 1263 |
| PleI | GAGTC | 3 cut(s) | 1468, 1730, 2125 |
| PpsI | GAGTC | 3 cut(s) | 1468, 1730, 2125 |
| Ppu21I | YACGTR | 2 cut(s) | 809, 1169 |
| PpuMI | RGGWCCY | 1 cut(s) | 1959 |
| PscI | ACATGT | 1 cut(s) | 1233 |
| PshBI | ATTAAT | 1 cut(s) | 1389 |
| Psp5II | RGGWCCY | 1 cut(s) | 1959 |
| Psp6I | CCWGG | 3 cut(s) | 244, 475, 1222 |
| PspGI | CCWGG | 3 cut(s) | 244, 475, 1222 |
| PspN4I | GGNNCC | 3 cut(s) | 236, 1591, 1868 |
| PspPI | GGNCC | 6 cut(s) | 31, 235, 242, 275, 1358, 1959 |
| PspPPI | RGGWCCY | 1 cut(s) | 1959 |
| PstI | CTGCAG | 1 cut(s) | 933 |
| PstNI | CAGNNNCTG | 1 cut(s) | 529 |
| PsuI | RGATCY | 1 cut(s) | 526 |
| RsaI | GTAC | 5 cut(s) | 802, 1591, 1626, 1752, 1928 |
| RsaNI | GTAC | 5 cut(s) | 801, 1590, 1625, 1751, 1927 |
| RseI | CAYNNNNRTG | 1 cut(s) | 658 |
| SalI | GTCGAC | 1 cut(s) | 519 |
| SaqAI | TTAA | 4 cut(s) | 618, 1389, 1844, 2066 |
| SatI | GCNGC | 5 cut(s) | 90, 115, 462, 948, 1262 |
| Sau3AI | GATC | 7 cut(s) | 175, 218, 418, 526, 607, 1942, 2075 |
| Sau96I | GGNCC | 6 cut(s) | 31, 235, 242, 275, 1358, 1959 |
| ScaI | AGTACT | 1 cut(s) | 802 |
| SchI | GAGTC | 3 cut(s) | 1469, 1730, 2126 |
| ScrFI | CCNGG | 4 cut(s) | 30, 246, 477, 1224 |
| SduI | GDGCHC | 3 cut(s) | 642, 886, 1887 |
| SfaNI | GCATC | 5 cut(s) | 14, 181, 361, 943, 1088 |
| SfcI | CTRYAG | 1 cut(s) | 929 |
| SfuI | TTCGAA | 1 cut(s) | 580 |
| SinI | GGWCC | 3 cut(s) | 235, 275, 1959 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 658 |
| SmlI | CTYRAG | 1 cut(s) | 617 |
| SmoI | CTYRAG | 1 cut(s) | 617 |
| SsiI | CCGC | 3 cut(s) | 461, 646, 687 |
| SspMI | CTAG | 3 cut(s) | 1424, 1512, 2061 |
| StyD4I | CCNGG | 4 cut(s) | 28, 244, 475, 1222 |
| StyI | CCWWGG | 2 cut(s) | 238, 832 |
| TaaI | ACNGT | 6 cut(s) | 279, 577, 1177, 1299, 1889, 2024 |
| TaiI | ACGT | 3 cut(s) | 215, 811, 1171 |
| TaqI | TCGA | 6 cut(s) | 292, 520, 580, 909, 1179, 1303 |
| TatI | WGTACW | 2 cut(s) | 800, 1750 |
| TauI | GCSGC | 1 cut(s) | 464 |
| TfiI | GAWTC | 7 cut(s) | 59, 289, 472, 545, 989, 1349, 1652 |
| Tru1I | TTAA | 4 cut(s) | 618, 1389, 1844, 2066 |
| Tru9I | TTAA | 4 cut(s) | 618, 1389, 1844, 2066 |
| TscAI | CASTG | 4 cut(s) | 881, 1052, 1914, 2129 |
| TseFI | GTSAC | 1 cut(s) | 346 |
| TseI | GCWGC | 4 cut(s) | 89, 114, 947, 1261 |
| Tsp45I | GTSAC | 1 cut(s) | 346 |
| TspDTI | ATGAA | 6 cut(s) | 404, 558, 1347, 1359, 1610, 2096 |
| TspGWI | ACGGA | 1 cut(s) | 1673 |
| TspRI | CASTG | 4 cut(s) | 881, 1052, 1914, 2129 |
| Vha464I | CTTAAG | 1 cut(s) | 617 |
| VpaK11BI | GGWCC | 3 cut(s) | 235, 275, 1959 |
| VspI | ATTAAT | 1 cut(s) | 1389 |
| XapI | RAATTY | 4 cut(s) | 392, 612, 1790, 2101 |
| XceI | RCATGY | 3 cut(s) | 515, 1237, 1668 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1900 |
| XmiI | GTMKAC | 4 cut(s) | 488, 520, 1070, 1543 |
| XmnI | GAANNNNTTC | 1 cut(s) | 105 |
| XspI | CTAG | 3 cut(s) | 1424, 1512, 2061 |
| ZrmI | AGTACT | 1 cut(s) | 802 |