Prupe.3G057600_v2.0.a1

Poly(A) polymerase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
4078715 .. 4082169
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G057600.1

Sequence Viewer

Length: 1587 bp
ATGGAGAGTTCAGCGACATTGATTGCTCCGCCCCCGCAGCCTCCGCCTCCTCCTCAAGCGTCGGCGAGGCAGTACGGAGTGACACGGCCAATATCGACATCGGAGCCCACCGAAGTCGATATTCAAATGAATATAGAGTTGGAGAAGTTTTTGATTGAAGAAGCTGGAGTATATGAGAGCAAAGAGGAAGCTACCAAGGGAGAGCAAGTTCTTCAGCGAATTGAGCAGATTGTTAAGGATTGGGTGAAGCAACTTACTCGCTCGAGAGGATACACAGAGCAAATGGTTGAGGATGCTAATGCTCTTATTTTTACATTTGGCTCCTATAGGCTTAGGGTACATTATCCTGGGGATGAAATAGAAATTTTATGTGTCGGGCCATCCTACATCAATCGAGAGGAAGACTTCTTCTTTATATTGCAAAACATTCTGGCTGAGATGGAAGAGGTGACTGAACTGCAACCACTTCCAGATGCTCATATTCCTGTGATGAAATTTAAGTTTGATGGAGTACCGATCGACCTCCTTTATGCAAGCATTTCTCTCTTGGTTGTACCAGAAGACCTGGACATTTCTGATGCATCTCTGTTGTATGATGTTGACGAGCATACTATTCGAAGTCTTAATTGCTGCAGGGTTGCAGATCAAATTCTAAAACTTGTTCCAAATGTTGAGCATTTCTGTACAACATTGAGATGCTTGAAGTTTTGGGCGAAAAGGCGCGGTGTTTATTCCAATGTTATTGGATTTCTTGGTGGAGTGGACTGGGCTATTCTTGTTGCCCGGGTGTGCCAGCTTTATCCAAATGCAGTTCCCAGCATGCTGGTTTCTAGATTTTTTAGAGTATATACAGAGTGGCGTTGGCCAAATCCTGTAATGTTATGTGCCATTGAGGAGGATGAACTTGGTTTTTCTGTCTGGGACCCGCGTAAAAATCCTCATGACCGGACTCATCACATGCCAATTATAACCCCTGCCTACCCTTGTATGAACTCCAGCGACAATGTGTCACAAAGTACCCTGCGTGTTATGGTGGAGCAGTTTCAATATGGCAACAACATCTGTGAGAAAGTGGAGCTTTTCAAAGCTGAGTGGTGTGCTTTGTTCGAACCATACTTGTTGTTTGAAAGCTACAAGAATTATCTTCAGGTTGACATAGTTGCTGCTGATGTTGATGACTTGCGTGCTTGGAAAGGCTGGGTCGAATCTCACCTGAACCAACTGACTCTAATGATTGAAAGGGATACTTTAGGGATGTTGCAATGCCATCCTTATCCCCGTGAGTATGTCGATACGAACAAACAATGCGCACATAGTGCCTTTTTTATGGGTTTGCAGAAGAAGCAGGGGGAAAAGATTCAGGGTCAGCAGTTCGATATACGAGGAACTGTTGATGAGTTCAGGCATTCTGTTAATATGTACATGTTTTGGAAACCGGGGATGGAAATTTATGTTTCTCATGTTCGTAGAAGGCTACTACCTCCGTATGTGTTTCCAGATGGTTGTAGACCACGTCGACCGTCTAGACATACGGCGCAACATCAGGCTGATAACTTGCCTTGTGATAATGGAGAAGTAGCCCCATAA

Protein Analysis

529

Amino Acids

60.97

Weight (kDa)

5.22

Isoelectric Point (pI)

55.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000312)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 968
Acc16I TGCGCA 1 cut(s) 1309
AccI GTMKAC 2 cut(s) 1507, 1516
AccII CGCG 2 cut(s) 723, 928
AciI CCGC 5 cut(s) 29, 35, 44, 723, 926
AcoI YGGCCR 2 cut(s) 86, 863
AcsI RAATTY 4 cut(s) 363, 494, 648, 1446
AcuI CTGAAG 2 cut(s) 197, 1130
AdeI CACNNNGTG 1 cut(s) 1316
AfaI GTAC 7 cut(s) 74, 339, 513, 555, 685, 1018, 1421
AflIII ACRYGT 1 cut(s) 1422
AgsI TTSAA 7 cut(s) 125, 158, 703, 1046, 1084, 1127, 1238
AhdI GACNNNNNGTC 1 cut(s) 1006
AjiI CACGTC 1 cut(s) 1514
AjnI CCWGG 2 cut(s) 346, 564
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AloI GAACNNNNNNTCC 2 cut(s) 192, 224
AluBI AGCT 6 cut(s) 164, 191, 796, 1078, 1088, 1131
AluI AGCT 6 cut(s) 164, 191, 796, 1078, 1088, 1131
Ama87I CYCGRG 2 cut(s) 262, 783
AoxI GGCC 3 cut(s) 86, 377, 863
ApeKI GCWGC 3 cut(s) 37, 630, 1163
ApoI RAATTY 4 cut(s) 363, 494, 648, 1446
Asp700I GAANNNNTTC 1 cut(s) 1356
AspLEI GCGC 3 cut(s) 723, 1310, 1537
AspS9I GGNCC 2 cut(s) 377, 922
AsuC2I CCSGG 3 cut(s) 784, 785, 1437
AsuHPI GGTGA 3 cut(s) 256, 460, 1202
AsuII TTCGAA 2 cut(s) 616, 1107
AvaI CYCGRG 2 cut(s) 262, 783
AvaII GGWCC 1 cut(s) 922
BalI TGGCCA 1 cut(s) 865
BanII GRGCYC 1 cut(s) 108
BbsI GAAGAC 2 cut(s) 408, 567
BbvI GCAGC 3 cut(s) 49, 617, 1150
BccI CCATC 6 cut(s) 388, 433, 500, 1275, 1435, 1493
BceAI ACGGC 2 cut(s) 101, 1548
BcgI CGANNNNNNTGC 4 cut(s) 239, 273, 596, 630
BciT130I CCWGG 2 cut(s) 348, 566
BciVI GTATCC 2 cut(s) 263, 1237
BcnI CCSGG 3 cut(s) 784, 785, 1437
BfaI CTAG 2 cut(s) 831, 1524
BfmI CTRYAG 2 cut(s) 325, 631
BfuI GTATCC 2 cut(s) 263, 1237
BisI GCNGC 3 cut(s) 38, 631, 1164
BlsI GCNGC 3 cut(s) 39, 632, 1165
Bme1390I CCNGG 5 cut(s) 348, 566, 784, 785, 1437
Bme18I GGWCC 1 cut(s) 922
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmeT110I CYCGRG 2 cut(s) 262, 783
BmgBI CACGTC 1 cut(s) 1514
BmgT120I GGNCC 2 cut(s) 377, 922
BmiI GGNNCC 4 cut(s) 105, 322, 923, 924
BmrFI CCNGG 5 cut(s) 348, 566, 784, 785, 1437
BmrI ACTGGG 1 cut(s) 775
BmsI GCATC 5 cut(s) 283, 463, 568, 590, 686
BmuI ACTGGG 1 cut(s) 775
BpiI GAAGAC 2 cut(s) 408, 567
BpmI CTGGAG 2 cut(s) 186, 979
Bpu10I CCTNAGC 1 cut(s) 332
Bpu14I TTCGAA 2 cut(s) 616, 1107
BpuEI CTTGAG 1 cut(s) 39
BpuMI CCSGG 3 cut(s) 784, 785, 1437
BsaJI CCNNGG 4 cut(s) 195, 347, 783, 1436
BsaWI WCCGGW 1 cut(s) 945
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bse1I ACTGG 1 cut(s) 770
Bse3DI GCAATG 1 cut(s) 1268
BseBI CCWGG 2 cut(s) 348, 566
BseDI CCNNGG 4 cut(s) 195, 347, 783, 1436
BseGI GGATG 7 cut(s) 298, 358, 380, 904, 1260, 1267, 1446
BseMI GCAATG 1 cut(s) 1268
BseMII CTCAG 2 cut(s) 426, 1080
BseNI ACTGG 1 cut(s) 770
BseRI GAGGAG 3 cut(s) 39, 42, 908
BseXI GCAGC 3 cut(s) 49, 617, 1150
BseYI CCCAGC 2 cut(s) 815, 1197
Bsh1236I CGCG 2 cut(s) 723, 928
Bsh1285I CGRYCG 2 cut(s) 519, 1520
BshFI GGCC 3 cut(s) 88, 379, 865
BsiEI CGRYCG 2 cut(s) 519, 1520
BsiHKCI CYCGRG 2 cut(s) 262, 783
BsiSI CCGG 3 cut(s) 784, 946, 1436
BslFI GGGAC 1 cut(s) 935
BsmFI GGGAC 1 cut(s) 935
BsmI GAATGC 1 cut(s) 1405
BsnI GGCC 3 cut(s) 88, 379, 865
BsoBI CYCGRG 2 cut(s) 262, 783
Bsp119I TTCGAA 2 cut(s) 616, 1107
Bsp1286I GDGCHC 1 cut(s) 108
Bsp1407I TGTACA 2 cut(s) 683, 1419
Bsp143I GATC 2 cut(s) 516, 643
BspACI CCGC 5 cut(s) 29, 35, 44, 723, 926
BspANI GGCC 3 cut(s) 88, 379, 865
BspCNI CTCAG 2 cut(s) 427, 1081
BspFNI CGCG 2 cut(s) 723, 928
BspHI TCATGA 1 cut(s) 940
BspLI GGNNCC 4 cut(s) 105, 322, 923, 924
BspMAI CTGCAG 1 cut(s) 635
BspT104I TTCGAA 2 cut(s) 616, 1107
BsrDI GCAATG 1 cut(s) 1268
BsrGI TGTACA 2 cut(s) 683, 1419
BsrI ACTGG 1 cut(s) 770
BssECI CCNNGG 4 cut(s) 195, 347, 783, 1436
BssMI GATC 2 cut(s) 516, 643
BssT1I CCWWGG 1 cut(s) 195
Bst2UI CCWGG 2 cut(s) 348, 566
Bst4CI ACNGT 2 cut(s) 1390, 1521
Bst6I CTCTTC 1 cut(s) 438
BstAPI GCANNNNNTGC 1 cut(s) 1316
BstAUI TGTACA 2 cut(s) 683, 1419
BstBI TTCGAA 2 cut(s) 616, 1107
BstC8I GCNNGC 4 cut(s) 535, 794, 821, 1185
BstDEI CTNAG 3 cut(s) 332, 435, 1089
BstF5I GGATG 7 cut(s) 298, 358, 380, 904, 1260, 1267, 1446
BstFNI CGCG 2 cut(s) 723, 928
BstHHI GCGC 3 cut(s) 723, 1310, 1537
BstKTI GATC 2 cut(s) 519, 646
BstMBI GATC 2 cut(s) 516, 643
BstMCI CGRYCG 2 cut(s) 519, 1520
BstMWI GCNNNNNNNGC 5 cut(s) 37, 43, 223, 1316, 1342
BstNI CCWGG 2 cut(s) 348, 566
BstNSI RCATGY 3 cut(s) 823, 961, 1426
BstSCI CCNGG 5 cut(s) 346, 564, 782, 783, 1435
BstSFI CTRYAG 2 cut(s) 325, 631
BstUI CGCG 2 cut(s) 723, 928
BstV1I GCAGC 3 cut(s) 49, 617, 1150
BstV2I GAAGAC 2 cut(s) 408, 567
BstXI CCANNNNNNTGG 1 cut(s) 823
BsuI GTATCC 2 cut(s) 263, 1237
BsuRI GGCC 3 cut(s) 88, 379, 865
BtrI CACGTC 1 cut(s) 1514
BtsCI GGATG 7 cut(s) 298, 358, 380, 904, 1260, 1267, 1446
Cac8I GCNNGC 4 cut(s) 535, 794, 821, 1185
CciI TCATGA 1 cut(s) 940
CfoI GCGC 3 cut(s) 723, 1310, 1537
Cfr13I GGNCC 2 cut(s) 377, 922
Cfr9I CCCGGG 1 cut(s) 783
CseI GACGC 1 cut(s) 48
Csp6I GTAC 7 cut(s) 73, 338, 512, 554, 684, 1017, 1420
CviAII CATG 5 cut(s) 820, 941, 958, 1423, 1460
CviQI GTAC 7 cut(s) 73, 338, 512, 554, 684, 1017, 1420
DdeI CTNAG 3 cut(s) 332, 435, 1089
DpnI GATC 2 cut(s) 518, 645
DpnII GATC 2 cut(s) 516, 643
DraIII CACNNNGTG 1 cut(s) 1316
DriI GACNNNNNGTC 1 cut(s) 1006
EaeI YGGCCR 2 cut(s) 86, 863
Eam1104I CTCTTC 1 cut(s) 438
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 1 cut(s) 438
EciI GGCGGA 2 cut(s) 18, 33
Eco130I CCWWGG 1 cut(s) 195
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 922
Eco57I CTGAAG 2 cut(s) 197, 1130
Eco88I CYCGRG 2 cut(s) 262, 783
EcoO109I RGGNCCY 1 cut(s) 922
EcoRII CCWGG 2 cut(s) 346, 564
EcoT14I CCWWGG 1 cut(s) 195
EcoT22I ATGCAT 1 cut(s) 583
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 195
FaeI CATG 5 cut(s) 823, 944, 961, 1426, 1463
FalI AAGNNNNNCTT 4 cut(s) 1062, 1094, 1231, 1263
FaqI GGGAC 1 cut(s) 935
FatI CATG 5 cut(s) 819, 940, 957, 1422, 1459
FauI CCCGC 2 cut(s) 42, 933
FblI GTMKAC 2 cut(s) 1507, 1516
Fnu4HI GCNGC 3 cut(s) 38, 631, 1164
FokI GGATG 7 cut(s) 305, 365, 367, 911, 1254, 1267, 1453
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 3 cut(s) 38, 631, 1164
FspAI RTGCGCAY 1 cut(s) 1309
FspBI CTAG 2 cut(s) 831, 1524
FspI TGCGCA 1 cut(s) 1309
GlaI GCGC 3 cut(s) 722, 1309, 1536
GluI GCNGC 3 cut(s) 38, 631, 1164
GsaI CCCAGC 2 cut(s) 819, 1201
GsuI CTGGAG 2 cut(s) 186, 979
HaeIII GGCC 3 cut(s) 88, 379, 865
HapII CCGG 3 cut(s) 784, 946, 1436
HgaI GACGC 1 cut(s) 48
HhaI GCGC 3 cut(s) 723, 1310, 1537
Hin1II CATG 5 cut(s) 823, 944, 961, 1426, 1463
Hin6I GCGC 3 cut(s) 721, 1308, 1535
HinP1I GCGC 3 cut(s) 721, 1308, 1535
HincII GTYRAC 3 cut(s) 601, 1153, 1517
HindII GTYRAC 3 cut(s) 601, 1153, 1517
HinfI GANTC 4 cut(s) 949, 1205, 1225, 1357
HpaII CCGG 3 cut(s) 784, 946, 1436
HphI GGTGA 3 cut(s) 256, 460, 1202
Hpy166II GTNNAC 5 cut(s) 601, 763, 1153, 1508, 1517
Hpy188I TCNGA 2 cut(s) 103, 577
Hpy188III TCNNGA 7 cut(s) 264, 395, 470, 831, 941, 1496, 1524
Hpy8I GTNNAC 5 cut(s) 601, 763, 1153, 1508, 1517
Hpy99I CGWCG 2 cut(s) 64, 1518
HpyAV CCTTC 1 cut(s) 1464
HpyCH4III ACNGT 2 cut(s) 1390, 1521
HpyCH4IV ACGT 1 cut(s) 1513
HpyCH4V TGCA 9 cut(s) 421, 460, 533, 581, 633, 641, 809, 1261, 1336
HpyF10VI GCNNNNNNNGC 5 cut(s) 37, 43, 223, 1316, 1342
HpyF3I CTNAG 3 cut(s) 332, 435, 1089
HpySE526I ACGT 1 cut(s) 1513
Hsp92II CATG 5 cut(s) 823, 944, 961, 1426, 1463
HspAI GCGC 3 cut(s) 721, 1308, 1535
KflI GGGWCCC 1 cut(s) 922
Kzo9I GATC 2 cut(s) 516, 643
LmnI GCTCC 5 cut(s) 31, 103, 326, 1036, 1075
Lsp1109I GCAGC 3 cut(s) 49, 617, 1150
LweI GCATC 5 cut(s) 283, 463, 568, 590, 686
MaeI CTAG 2 cut(s) 831, 1524
MaeII ACGT 1 cut(s) 1513
MaeIII GTNAC 3 cut(s) 79, 448, 1008
MalI GATC 2 cut(s) 518, 645
MboI GATC 2 cut(s) 516, 643
MboII GAAGA 8 cut(s) 170, 203, 400, 413, 455, 572, 1136, 1351
MhlI GDGCHC 1 cut(s) 108
MlsI TGGCCA 1 cut(s) 865
MluCI AATT 8 cut(s) 219, 363, 494, 625, 648, 963, 1138, 1446
MluNI TGGCCA 1 cut(s) 865
MlyI GAGTC 2 cut(s) 943, 1219
MmeI TCCRAC 1 cut(s) 120
Mox20I TGGCCA 1 cut(s) 865
Mph1103I ATGCAT 1 cut(s) 583
MroXI GAANNNNTTC 1 cut(s) 1356
MscI TGGCCA 1 cut(s) 865
MseI TTAA 4 cut(s) 234, 498, 624, 1413
MslI CAYNNNNRTG 1 cut(s) 694
Msp20I TGGCCA 1 cut(s) 865
MspI CCGG 3 cut(s) 784, 946, 1436
MspR9I CCNGG 5 cut(s) 348, 566, 784, 785, 1437
Mva1269I GAATGC 1 cut(s) 1405
MvaI CCWGG 2 cut(s) 348, 566
MvnI CGCG 2 cut(s) 723, 928
MwoI GCNNNNNNNGC 5 cut(s) 37, 43, 223, 1316, 1342
NciI CCSGG 3 cut(s) 784, 785, 1437
NdeII GATC 2 cut(s) 516, 643
NlaIII CATG 5 cut(s) 823, 944, 961, 1426, 1463
NlaIV GGNNCC 4 cut(s) 105, 322, 923, 924
NmuCI GTSAC 3 cut(s) 79, 448, 1008
NsbI TGCGCA 1 cut(s) 1309
NsiI ATGCAT 1 cut(s) 583
NspI RCATGY 3 cut(s) 823, 961, 1426
NspV TTCGAA 2 cut(s) 616, 1107
PaeI GCATGC 1 cut(s) 823
PaeR7I CTCGAG 1 cut(s) 262
PagI TCATGA 1 cut(s) 940
PciI ACATGT 1 cut(s) 1422
PctI GAATGC 1 cut(s) 1405
PdmI GAANNNNTTC 1 cut(s) 1356
PfeI GAWTC 2 cut(s) 1205, 1357
PflFI GACNNNGTC 1 cut(s) 1512
PkrI GCNGC 3 cut(s) 39, 632, 1165
Ple19I CGATCG 1 cut(s) 519
PleI GAGTC 2 cut(s) 943, 1219
PpsI GAGTC 2 cut(s) 943, 1219
PpuMI RGGWCCY 1 cut(s) 922
PscI ACATGT 1 cut(s) 1422
PsiI TTATAA 1 cut(s) 968
Psp5II RGGWCCY 1 cut(s) 922
Psp6I CCWGG 2 cut(s) 346, 564
PspFI CCCAGC 2 cut(s) 815, 1197
PspGI CCWGG 2 cut(s) 346, 564
PspN4I GGNNCC 4 cut(s) 105, 322, 923, 924
PspPI GGNCC 2 cut(s) 377, 922
PspPPI RGGWCCY 1 cut(s) 922
PstI CTGCAG 1 cut(s) 635
PsyI GACNNNGTC 1 cut(s) 1512
PvuI CGATCG 1 cut(s) 519
RsaI GTAC 7 cut(s) 74, 339, 513, 555, 685, 1018, 1421
RsaNI GTAC 7 cut(s) 73, 338, 512, 554, 684, 1017, 1420
RseI CAYNNNNRTG 1 cut(s) 694
SalI GTCGAC 1 cut(s) 1515
SaqAI TTAA 4 cut(s) 234, 498, 624, 1413
SatI GCNGC 3 cut(s) 38, 631, 1164
Sau3AI GATC 2 cut(s) 516, 643
Sau96I GGNCC 2 cut(s) 377, 922
SchI GAGTC 2 cut(s) 943, 1219
ScrFI CCNGG 5 cut(s) 348, 566, 784, 785, 1437
SduI GDGCHC 1 cut(s) 108
SfaNI GCATC 5 cut(s) 283, 463, 568, 590, 686
SfcI CTRYAG 2 cut(s) 325, 631
Sfr274I CTCGAG 1 cut(s) 262
SfuI TTCGAA 2 cut(s) 616, 1107
SinI GGWCC 1 cut(s) 922
SlaI CTCGAG 1 cut(s) 262
SmaI CCCGGG 1 cut(s) 785
SmiMI CAYNNNNRTG 1 cut(s) 694
SmlI CTYRAG 2 cut(s) 54, 262
SmoI CTYRAG 2 cut(s) 54, 262
SphI GCATGC 1 cut(s) 823
Sse9I AATT 8 cut(s) 219, 363, 494, 625, 648, 963, 1138, 1446
SsiI CCGC 5 cut(s) 29, 35, 44, 723, 926
SspMI CTAG 2 cut(s) 831, 1524
StyD4I CCNGG 5 cut(s) 346, 564, 782, 783, 1435
StyI CCWWGG 1 cut(s) 195
TaaI ACNGT 2 cut(s) 1390, 1521
TaiI ACGT 1 cut(s) 1516
TasI AATT 8 cut(s) 219, 363, 494, 625, 648, 963, 1138, 1446
TatI WGTACW 2 cut(s) 683, 1419
TfiI GAWTC 2 cut(s) 1205, 1357
Tru1I TTAA 4 cut(s) 234, 498, 624, 1413
Tru9I TTAA 4 cut(s) 234, 498, 624, 1413
TseFI GTSAC 3 cut(s) 79, 448, 1008
TseI GCWGC 3 cut(s) 37, 630, 1163
Tsp45I GTSAC 3 cut(s) 79, 448, 1008
TspDTI ATGAA 5 cut(s) 143, 369, 506, 915, 1004
TspGWI ACGGA 2 cut(s) 90, 1473
TspMI CCCGGG 1 cut(s) 783
Tth111I GACNNNGTC 1 cut(s) 1512
VpaK11BI GGWCC 1 cut(s) 922
XapI RAATTY 4 cut(s) 363, 494, 648, 1446
XbaI TCTAGA 2 cut(s) 830, 1523
XceI RCATGY 3 cut(s) 823, 961, 1426
XhoI CTCGAG 1 cut(s) 262
XmaI CCCGGG 1 cut(s) 783
XmiI GTMKAC 2 cut(s) 1507, 1516
XmnI GAANNNNTTC 1 cut(s) 1356
XspI CTAG 2 cut(s) 831, 1524
Zsp2I ATGCAT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.