Poly(A) polymerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 5 - 35 | 7.2e-06 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 167 |
| AcoI | YGGCCR | 1 cut(s) | 52 |
| AcsI | RAATTY | 1 cut(s) | 158 |
| AfaI | GTAC | 1 cut(s) | 10 |
| AgsI | TTSAA | 3 cut(s) | 164, 196, 301 |
| AluBI | AGCT | 2 cut(s) | 47, 286 |
| AluI | AGCT | 2 cut(s) | 47, 286 |
| AoxI | GGCC | 2 cut(s) | 52, 94 |
| ApoI | RAATTY | 1 cut(s) | 158 |
| AspS9I | GGNCC | 1 cut(s) | 233 |
| AvaII | GGWCC | 1 cut(s) | 233 |
| BalI | TGGCCA | 1 cut(s) | 54 |
| BccI | CCATC | 1 cut(s) | 139 |
| BfaI | CTAG | 1 cut(s) | 281 |
| Bme18I | GGWCC | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 1 cut(s) | 233 |
| BmsI | GCATC | 4 cut(s) | 7, 30, 321, 343 |
| BsaBI | GATNNNNATC | 1 cut(s) | 247 |
| Bse8I | GATNNNNATC | 1 cut(s) | 247 |
| BseGI | GGATG | 2 cut(s) | 45, 336 |
| BseJI | GATNNNNATC | 1 cut(s) | 247 |
| BseMII | CTCAG | 1 cut(s) | 243 |
| BseRI | GAGGAG | 2 cut(s) | 19, 330 |
| BshFI | GGCC | 2 cut(s) | 54, 96 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsnI | GGCC | 2 cut(s) | 54, 96 |
| BspACI | CCGC | 1 cut(s) | 167 |
| BspANI | GGCC | 2 cut(s) | 54, 96 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| Bst6I | CTCTTC | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 2 cut(s) | 137, 252 |
| BstF5I | GGATG | 2 cut(s) | 45, 336 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 230 |
| BsuRI | GGCC | 2 cut(s) | 54, 96 |
| BtsCI | GGATG | 2 cut(s) | 45, 336 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| Cfr13I | GGNCC | 1 cut(s) | 233 |
| Csp6I | GTAC | 1 cut(s) | 9 |
| CviJI | RGCY | 4 cut(s) | 47, 54, 96, 286 |
| CviKI_1 | RGCY | 4 cut(s) | 47, 54, 96, 286 |
| CviQI | GTAC | 1 cut(s) | 9 |
| DdeI | CTNAG | 2 cut(s) | 137, 252 |
| EaeI | YGGCCR | 1 cut(s) | 52 |
| Eam1104I | CTCTTC | 1 cut(s) | 200 |
| EarI | CTCTTC | 1 cut(s) | 200 |
| Eco47I | GGWCC | 1 cut(s) | 233 |
| EcoT22I | ATGCAT | 1 cut(s) | 336 |
| FaiI | YATR | 7 cut(s) | 24, 78, 88, 171, 239, 289, 343 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FokI | GGATG | 2 cut(s) | 52, 343 |
| FspBI | CTAG | 1 cut(s) | 281 |
| HaeIII | GGCC | 2 cut(s) | 54, 96 |
| HindIII | AAGCTT | 1 cut(s) | 45 |
| HinfI | GANTC | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 196, 223 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyAV | CCTTC | 1 cut(s) | 143 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 4 cut(s) | 20, 43, 102, 334 |
| HpyF3I | CTNAG | 2 cut(s) | 137, 252 |
| HpySE526I | ACGT | 1 cut(s) | 74 |
| LpnPI | CCDG | 2 cut(s) | 75, 236 |
| LweI | GCATC | 4 cut(s) | 7, 30, 321, 343 |
| MaeI | CTAG | 1 cut(s) | 281 |
| MaeII | ACGT | 1 cut(s) | 74 |
| MboII | GAAGA | 1 cut(s) | 217 |
| MfeI | CAATTG | 1 cut(s) | 187 |
| MlsI | TGGCCA | 1 cut(s) | 54 |
| MluCI | AATT | 4 cut(s) | 131, 158, 187, 346 |
| MluNI | TGGCCA | 1 cut(s) | 54 |
| MmeI | TCCRAC | 1 cut(s) | 211 |
| MnlI | CCTC | 3 cut(s) | 205, 247, 308 |
| Mox20I | TGGCCA | 1 cut(s) | 54 |
| Mph1103I | ATGCAT | 1 cut(s) | 336 |
| MscI | TGGCCA | 1 cut(s) | 54 |
| Msp20I | TGGCCA | 1 cut(s) | 54 |
| MunI | CAATTG | 1 cut(s) | 187 |
| NsiI | ATGCAT | 1 cut(s) | 336 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PspPI | GGNCC | 1 cut(s) | 233 |
| RsaI | GTAC | 1 cut(s) | 10 |
| RsaNI | GTAC | 1 cut(s) | 9 |
| Sau96I | GGNCC | 1 cut(s) | 233 |
| SetI | ASST | 6 cut(s) | 49, 77, 216, 238, 282, 288 |
| SfaNI | GCATC | 4 cut(s) | 7, 30, 321, 343 |
| SgeI | CNNG | 9 cut(s) | 26, 56, 60, 74, 166, 208, 235, 293, 307 |
| SinI | GGWCC | 1 cut(s) | 233 |
| Sse9I | AATT | 4 cut(s) | 131, 158, 187, 346 |
| SsiI | CCGC | 1 cut(s) | 167 |
| SspMI | CTAG | 1 cut(s) | 281 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TaiI | ACGT | 1 cut(s) | 77 |
| TasI | AATT | 4 cut(s) | 131, 158, 187, 346 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| VpaK11BI | GGWCC | 1 cut(s) | 233 |
| XapI | RAATTY | 1 cut(s) | 158 |
| XspI | CTAG | 1 cut(s) | 281 |
| Zsp2I | ATGCAT | 1 cut(s) | 336 |