Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003342.1

Orthogroup ID

OG0000312

Physical Location & Seq

Genomic Coordinates Reverse (-)

91888 .. 95949

Gene Structure 4062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003342.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

atgagttcagaggggttgagtgcttcaccaccgcctggggaggcggtggtcggaaagcaatacggagtgacacatccaatttcgctagccggggcaactgcattcgatattgagagaacttcagagttggagaagttcttggttgaagctgggctttatgaaagcaaagaggaagctgccaagagagaggaggttcttcaccgaattgggcagattgttaaggattgggtgaagcaacttactcagttgagaggatacacagatcaaatggttgaggatgctaatgctcttatttttacatttggttcgtataggcttggggtacatggtcctggggatgagatagacacattgtgtgttgggccatcttatgtcaaccgtgaggaagacttcttctttgtattgcacaacattctggctgaaatggaagaagtgactgaactgcaagtagtcccagatgctcatgttcccgtaatgaagtttaagttcgatggaatatcaattgacctcctttatgctagtgtttctctgttggttgtaccagaaaacctggacatttctgaagtatctctgttgcacaacatcgatgagcctgctgttcgaagtcttaatggctgcagggatgttgatcaaattcttaagcttgttccaaatgttgaggttgacggactcctctgcatatgtttagttactggatttcttggtggtgtgaactgggctctcctcattgcccgagtgtgtcaactttatcctaatgcagttcctagcgtgctggtttctcgattttttagagtctacacacagtggcgatggccaaatcctgtcatgttatgtgccattgaagaggatgaacttggttttggtgtttgggacccccgcaaaaatccccgcgaccggactcatcatatgccaattataactcctgcatacccttatatgaactctagctacaatgtttctaaaagtaccctccgtgtcatgatggagcaatttcagcatggaaacaagatttgtgaggaaatagaaccggataaggctaggtggtgtgctctgttcgaaccatatttgttctttgaaagctacaagaactatctccaggtcgacatcgttgcagttgatgctgatgatctgcgtgcttggaaaggctgggtggaatctcggttgaggcaactgactctaatgattgagcgggataatttggagatgttacaatggcacccatatcctcatgagtatgttgatacaaccaaacagtgtgcacatagtgctttctttatgggttttcagaggaaaaaaggtgaaaagcttaatggtcatcgattcgatatacaagggactgttgatgagttcaagcagtccattgttgatatgtacatttttgggaaacctgggatggaattctatgtttctcactttcgtagaaggcgccttccttcttacgtgtttcctgatggttataaacgacctagacggtctagagttttggcccagcaacatgatcatgaagttagtgcaacgagttccggtgagagacacctgaagaggaagaatgatcttggtgggggttcgccggagaaacgactatccattatccctcacaaagcaggaagtgcatctacaaagactttggataaatgtgttaatatggaggttgttgaatcaaactctggagaactggagcctggagatgcctccaattccagtgttattacaaatgttactagcatcactagtattttcgaaaaatttgatatatatagccaaattgtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0070566 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

590

Amino Acids

67.06

Weight (kDa)

5.53

Isoelectric Point (pI)

45.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850 AT4G32850
fragaria_vesca	FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_2g35240 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471 FvH4_6g32471
malus_domestica	MD08G1110400.v1.1 MD09G1202000.v1.1 MD09G1202100.v1.1 MD17G1182800.v1.1
prunus_persica	Prupe.1G444600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057600_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1 Prupe.3G057700_v2.0.a1
pyrus_communis	pycom08g09190 pycom09g11890 pycom15g08420 pycom17g19200
rosa_chinensis	RchiOBHm_Chr2g0140721 RchiOBHm_Chr2g0140741 RchiOBHm_Chr2g0140761 RchiOBHm_Chr6g0306691
rosa_laevigata	RLG00000010773 RLG00000019895 RLG00000019896
rosa_multiflora	Rmu_co8193342.1_g000001 Rmu_sc0003342.1_g000015 Rmu_sc0003342.1_g000021 Rmu_sc0003342.1_g000026 Rmu_sc0005201.1_g000002 Rmu_sc0017785.1_g000009
rosa_roxburghii	Rroxscaffold_2G00104510 Rroxscaffold_2G00104540 Rroxscaffold_7G00161540
rosa_rugosa	Rorug02G0364600 Rorug02G0364700 Rorug02G0364800 Rorug02G0364900 Rorug02G0365000 Rorug06G0351600 Rorug06G0351700
rosa_samantha	Rh2AG416100 Rh2AG416200 Rh2AG416300 Rh2BG425700 Rh2BG425800 Rh2BG425900 Rh2CG402300 Rh2CG402400 Rh2CG402500 Rh2DG435600 Rh2DG435700 Rh2DG435800 Rh6AG464000 Rh6BG437000 Rh6CG478100 Rh6DG464900
rosa_wichuraiana	Rw2G034050 Rw2G034060 Rw6G040420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	917, 1458
AccB1I	GGYRCC	2 cut(s)	1215, 1425
AccB7I	CCANNNNNTGG	1 cut(s)	35
AccBSI	CCGCTC	1 cut(s)	1189
AccI	GTMKAC	2 cut(s)	795, 1101
AccII	CGCG	1 cut(s)	891
AciI	CCGC	5 cut(s)	32, 44, 877, 889, 1189
AcoI	YGGCCR	1 cut(s)	812
AcsI	RAATTY	3 cut(s)	633, 1397, 1745
AcuI	CTGAAG	3 cut(s)	105, 582, 1559
AcyI	GRCGYC	1 cut(s)	1426
AdeI	CACNNNGTG	3 cut(s)	354, 804, 1265
AfaI	GTAC	4 cut(s)	324, 540, 967, 1373
AfiI	CCNNNNNNNGG	2 cut(s)	35, 894
AflII	CTTAAG	1 cut(s)	638
AflIII	ACRYGT	1 cut(s)	1440
AgsI	TTSAA	5 cut(s)	146, 842, 1076, 1351, 1658
AhlI	ACTAGT	1 cut(s)	1730
AjnI	CCWGG	6 cut(s)	34, 331, 549, 1095, 1387, 1681
AjuI	GAANNNNNNNTTGG	2 cut(s)	843, 875
AluBI	AGCT	6 cut(s)	149, 176, 643, 948, 1080, 1306
AluI	AGCT	6 cut(s)	149, 176, 643, 948, 1080, 1306
Alw21I	GWGCWC	2 cut(s)	1051, 1261
Alw26I	GTCTC	1 cut(s)	1525
Alw44I	GTGCAC	1 cut(s)	1257
Ama87I	CYCGRG	1 cut(s)	732
AoxI	GGCC	3 cut(s)	362, 812, 1485
ApaLI	GTGCAC	1 cut(s)	1257
ApeKI	GCWGC	2 cut(s)	176, 615
ApoI	RAATTY	3 cut(s)	633, 1397, 1745
ArsI	GACNNNNNNTTYG	2 cut(s)	380, 412
AspLEI	GCGC	1 cut(s)	1428
AspS9I	GGNCC	4 cut(s)	329, 362, 871, 1486
AsuC2I	CCSGG	1 cut(s)	91
AsuHPI	GGTGA	5 cut(s)	18, 191, 241, 1310, 1538
AsuII	TTCGAA	3 cut(s)	601, 1056, 1740
AsuNHI	GCTAGC	1 cut(s)	85
AvaI	CYCGRG	1 cut(s)	732
AvaII	GGWCC	2 cut(s)	329, 871
BaeGI	GKGCMC	1 cut(s)	1261
BalI	TGGCCA	1 cut(s)	814
BanI	GGYRCC	2 cut(s)	1215, 1425
BanII	GRGCYC	1 cut(s)	721
BarI	GAAGNNNNNNTAC	2 cut(s)	1600, 1632
BbsI	GAAGAC	1 cut(s)	393
Bbv12I	GWGCWC	2 cut(s)	1051, 1261
BbvI	GCAGC	2 cut(s)	163, 602
BccI	CCATC	6 cut(s)	373, 485, 804, 976, 1387, 1445
BcgI	CGANNNNNNTGC	4 cut(s)	575, 609, 1091, 1125
BciT130I	CCWGG	6 cut(s)	36, 333, 551, 1097, 1389, 1683
BciVI	GTATCC	1 cut(s)	248
BclI	TGATCA	2 cut(s)	628, 1498
BcnI	CCSGG	1 cut(s)	91
BcoDI	GTCTC	1 cut(s)	1525
BcuI	ACTAGT	1 cut(s)	1730
BfaI	CTAG	9 cut(s)	86, 519, 765, 945, 1038, 1467, 1476, 1722, 1731
BfmI	CTRYAG	1 cut(s)	616
BfoI	RGCGCY	1 cut(s)	1429
BfrI	CTTAAG	1 cut(s)	638
BfuI	GTATCC	1 cut(s)	248
BisI	GCNGC	2 cut(s)	177, 616
BlsI	GCNGC	2 cut(s)	178, 617
Bme1390I	CCNGG	7 cut(s)	36, 91, 333, 551, 1097, 1389, 1683
Bme18I	GGWCC	2 cut(s)	329, 871
BmeT110I	CYCGRG	1 cut(s)	732
BmgT120I	GGNCC	4 cut(s)	329, 362, 871, 1486
BmiI	GGNNCC	5 cut(s)	872, 873, 1217, 1427, 1680
BmrFI	CCNGG	7 cut(s)	36, 91, 333, 551, 1097, 1389, 1683
BmrI	ACTGGG	1 cut(s)	724
BmsI	GCATC	6 cut(s)	268, 448, 1108, 1622, 1678, 1734
BmtI	GCTAGC	1 cut(s)	89
BmuI	ACTGGG	1 cut(s)	724
BpiI	GAAGAC	1 cut(s)	393
BpmI	CTGGAG	4 cut(s)	1079, 1689, 1697, 1704
Bpu14I	TTCGAA	3 cut(s)	601, 1056, 1740
BpuMI	CCSGG	1 cut(s)	91
Bsa29I	ATCGAT	2 cut(s)	585, 1318
BsaAI	YACGTR	1 cut(s)	1441
BsaBI	GATNNNNATC	1 cut(s)	627
BsaHI	GRCGYC	1 cut(s)	1426
BsaJI	CCNNGG	4 cut(s)	35, 90, 332, 1388
BsaWI	WCCGGW	3 cut(s)	894, 1027, 1523
Bsc4I	CCNNNNNNNGG	2 cut(s)	35, 894
Bse1I	ACTGG	4 cut(s)	697, 719, 1680, 1701
Bse3DI	GCAATG	1 cut(s)	726
Bse8I	GATNNNNATC	1 cut(s)	627
BseBI	CCWGG	6 cut(s)	36, 333, 551, 1097, 1389, 1683
BseCI	ATCGAT	2 cut(s)	585, 1318
BseDI	CCNNGG	4 cut(s)	35, 90, 332, 1388
BseGI	GGATG	6 cut(s)	73, 283, 343, 628, 853, 1398
BseJI	GATNNNNATC	1 cut(s)	627
BseLI	CCNNNNNNNGG	2 cut(s)	35, 894
BseMI	GCAATG	1 cut(s)	726
BseMII	CTCAG	1 cut(s)	257
BseNI	ACTGG	4 cut(s)	697, 719, 1680, 1701
BseRI	GAGGAG	3 cut(s)	203, 662, 713
BseSI	GKGCMC	1 cut(s)	1261
BseXI	GCAGC	2 cut(s)	163, 602
BseYI	CCCAGC	3 cut(s)	149, 1146, 1488
Bsh1236I	CGCG	1 cut(s)	891
Bsh1285I	CGRYCG	1 cut(s)	895
BshFI	GGCC	3 cut(s)	364, 814, 1487
BshNI	GGYRCC	2 cut(s)	1215, 1425
BshVI	ATCGAT	2 cut(s)	585, 1318
BsiEI	CGRYCG	1 cut(s)	895
BsiHKAI	GWGCWC	2 cut(s)	1051, 1261
BsiHKCI	CYCGRG	1 cut(s)	732
BsiSI	CCGG	5 cut(s)	90, 895, 1028, 1524, 1571
BslFI	GGGAC	3 cut(s)	437, 884, 1348
BslI	CCNNNNNNNGG	2 cut(s)	35, 894
BsmAI	GTCTC	1 cut(s)	1525
BsmFI	GGGAC	3 cut(s)	437, 884, 1348
BsmI	GAATGC	1 cut(s)	101
BsnI	GGCC	3 cut(s)	364, 814, 1487
BsoBI	CYCGRG	1 cut(s)	732
Bsp119I	TTCGAA	3 cut(s)	601, 1056, 1740
Bsp1286I	GDGCHC	3 cut(s)	721, 1051, 1261
Bsp1407I	TGTACA	1 cut(s)	1371
Bsp143I	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
BspACI	CCGC	5 cut(s)	32, 44, 877, 889, 1189
BspANI	GGCC	3 cut(s)	364, 814, 1487
BspCNI	CTCAG	1 cut(s)	256
BspDI	ATCGAT	2 cut(s)	585, 1318
BspFNI	CGCG	1 cut(s)	891
BspHI	TCATGA	3 cut(s)	978, 1228, 1501
BspLI	GGNNCC	5 cut(s)	872, 873, 1217, 1427, 1680
BspMAI	CTGCAG	1 cut(s)	620
BspOI	GCTAGC	1 cut(s)	89
BspT104I	TTCGAA	3 cut(s)	601, 1056, 1740
BspT107I	GGYRCC	2 cut(s)	1215, 1425
BspTI	CTTAAG	1 cut(s)	638
BsrBI	CCGCTC	1 cut(s)	1189
BsrDI	GCAATG	1 cut(s)	726
BsrGI	TGTACA	1 cut(s)	1371
BsrI	ACTGG	4 cut(s)	697, 719, 1680, 1701
BssECI	CCNNGG	4 cut(s)	35, 90, 332, 1388
BssMI	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
BssNI	GRCGYC	1 cut(s)	1426
Bst2UI	CCWGG	6 cut(s)	36, 333, 551, 1097, 1389, 1683
Bst4CI	ACNGT	5 cut(s)	380, 804, 1254, 1339, 1473
Bst6I	CTCTTC	2 cut(s)	837, 1535
BstACI	GRCGYC	1 cut(s)	1426
BstAFI	CTTAAG	1 cut(s)	638
BstAPI	GCANNNNNTGC	3 cut(s)	1118, 1265, 1610
BstAUI	TGTACA	1 cut(s)	1371
BstBAI	YACGTR	1 cut(s)	1441
BstBI	TTCGAA	3 cut(s)	601, 1056, 1740
BstC8I	GCNNGC	4 cut(s)	87, 594, 770, 1134
BstDEI	CTNAG	1 cut(s)	243
BstF5I	GGATG	6 cut(s)	73, 283, 343, 628, 853, 1398
BstFNI	CGCG	1 cut(s)	891
BstH2I	RGCGCY	1 cut(s)	1429
BstHHI	GCGC	1 cut(s)	1428
BstKTI	GATC	5 cut(s)	265, 631, 1129, 1501, 1555
BstMAI	GTCTC	1 cut(s)	1525
BstMBI	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
BstMCI	CGRYCG	1 cut(s)	895
BstMWI	GCNNNNNNNGC	4 cut(s)	994, 1118, 1265, 1610
BstNI	CCWGG	6 cut(s)	36, 333, 551, 1097, 1389, 1683
BstSCI	CCNGG	7 cut(s)	34, 89, 331, 549, 1095, 1387, 1681
BstSFI	CTRYAG	1 cut(s)	616
BstSLI	GKGCMC	1 cut(s)	1261
BstUI	CGCG	1 cut(s)	891
BstV1I	GCAGC	2 cut(s)	163, 602
BstV2I	GAAGAC	1 cut(s)	393
Bsu15I	ATCGAT	2 cut(s)	585, 1318
BsuI	GTATCC	1 cut(s)	248
BsuRI	GGCC	3 cut(s)	364, 814, 1487
BsuTUI	ATCGAT	2 cut(s)	585, 1318
BtgZI	GCGATG	1 cut(s)	823
BtsCI	GGATG	6 cut(s)	73, 283, 343, 628, 853, 1398
BtsIMutI	CAGTG	3 cut(s)	809, 1259, 1708
Cac8I	GCNNGC	4 cut(s)	87, 594, 770, 1134
CciI	TCATGA	3 cut(s)	978, 1228, 1501
CfoI	GCGC	1 cut(s)	1428
Cfr13I	GGNCC	4 cut(s)	329, 362, 871, 1486
ClaI	ATCGAT	2 cut(s)	585, 1318
Csp6I	GTAC	4 cut(s)	323, 539, 966, 1372
CviAII	CATG	8 cut(s)	326, 464, 826, 979, 998, 1229, 1496, 1502
CviQI	GTAC	4 cut(s)	323, 539, 966, 1372
DdeI	CTNAG	1 cut(s)	243
DinI	GGCGCC	1 cut(s)	1427
DpnI	GATC	5 cut(s)	264, 630, 1128, 1500, 1554
DpnII	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
DraIII	CACNNNGTG	3 cut(s)	354, 804, 1265
EaeI	YGGCCR	1 cut(s)	812
Eam1104I	CTCTTC	2 cut(s)	837, 1535
EarI	CTCTTC	2 cut(s)	837, 1535
Eco24I	GRGCYC	1 cut(s)	721
Eco47I	GGWCC	2 cut(s)	329, 871
Eco57I	CTGAAG	3 cut(s)	105, 582, 1559
Eco88I	CYCGRG	1 cut(s)	732
EcoO109I	RGGNCCY	1 cut(s)	871
EcoRI	GAATTC	1 cut(s)	1397
EcoRII	CCWGG	6 cut(s)	34, 331, 549, 1095, 1387, 1681
EcoT38I	GRGCYC	1 cut(s)	721
EgeI	GGCGCC	1 cut(s)	1427
EheI	GGCGCC	1 cut(s)	1427
FaeI	CATG	8 cut(s)	329, 467, 829, 982, 1001, 1232, 1499, 1505
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	3 cut(s)	437, 884, 1348
FatI	CATG	8 cut(s)	325, 463, 825, 978, 997, 1228, 1495, 1501
FauI	CCCGC	3 cut(s)	884, 896, 1182
FauNDI	CATATG	2 cut(s)	680, 906
FbaI	TGATCA	2 cut(s)	628, 1498
FblI	GTMKAC	2 cut(s)	795, 1101
Fnu4HI	GCNGC	2 cut(s)	177, 616
FokI	GGATG	6 cut(s)	60, 290, 350, 635, 860, 1405
FriOI	GRGCYC	1 cut(s)	721
Fsp4HI	GCNGC	2 cut(s)	177, 616
FspBI	CTAG	9 cut(s)	86, 519, 765, 945, 1038, 1467, 1476, 1722, 1731
GlaI	GCGC	1 cut(s)	1427
GluI	GCNGC	2 cut(s)	177, 616
GsaI	CCCAGC	3 cut(s)	153, 1150, 1492
GsuI	CTGGAG	4 cut(s)	1079, 1689, 1697, 1704
HaeII	RGCGCY	1 cut(s)	1429
HaeIII	GGCC	3 cut(s)	364, 814, 1487
HapII	CCGG	5 cut(s)	90, 895, 1028, 1524, 1571
HhaI	GCGC	1 cut(s)	1428
Hin1I	GRCGYC	1 cut(s)	1426
Hin1II	CATG	8 cut(s)	329, 467, 829, 982, 1001, 1232, 1499, 1505
Hin6I	GCGC	1 cut(s)	1426
HinP1I	GCGC	1 cut(s)	1426
HincII	GTYRAC	4 cut(s)	376, 664, 743, 1102
HindII	GTYRAC	4 cut(s)	376, 664, 743, 1102
HindIII	AAGCTT	2 cut(s)	641, 1304
HinfI	GANTC	7 cut(s)	669, 792, 898, 1154, 1174, 1320, 1658
HpaII	CCGG	5 cut(s)	90, 895, 1028, 1524, 1571
HphI	GGTGA	5 cut(s)	18, 191, 241, 1310, 1538
Hpy166II	GTNNAC	7 cut(s)	376, 664, 712, 743, 796, 1102, 1259
Hpy188I	TCNGA	5 cut(s)	10, 53, 124, 562, 1287
Hpy188III	TCNNGA	7 cut(s)	780, 979, 1229, 1448, 1476, 1502, 1668
Hpy8I	GTNNAC	7 cut(s)	376, 664, 712, 743, 796, 1102, 1259
HpyAV	CCTTC	3 cut(s)	1416, 1439, 1443
HpyCH4III	ACNGT	5 cut(s)	380, 804, 1254, 1339, 1473
HpyCH4IV	ACGT	1 cut(s)	1440
HpyF10VI	GCNNNNNNNGC	4 cut(s)	994, 1118, 1265, 1610
HpyF3I	CTNAG	1 cut(s)	243
HpySE526I	ACGT	1 cut(s)	1440
Hsp92I	GRCGYC	1 cut(s)	1426
Hsp92II	CATG	8 cut(s)	329, 467, 829, 982, 1001, 1232, 1499, 1505
HspAI	GCGC	1 cut(s)	1426
KasI	GGCGCC	1 cut(s)	1425
KflI	GGGWCCC	1 cut(s)	871
Ksp22I	TGATCA	2 cut(s)	628, 1498
Kzo9I	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
LmnI	GCTCC	2 cut(s)	985, 1678
Lsp1109I	GCAGC	2 cut(s)	163, 602
LweI	GCATC	6 cut(s)	268, 448, 1108, 1622, 1678, 1734
MaeI	CTAG	9 cut(s)	86, 519, 765, 945, 1038, 1467, 1476, 1722, 1731
MaeII	ACGT	1 cut(s)	1440
MaeIII	GTNAC	5 cut(s)	67, 433, 688, 1206, 1717
MalI	GATC	5 cut(s)	264, 630, 1128, 1500, 1554
MbiI	CCGCTC	1 cut(s)	1189
MboI	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
MboII	GAAGA	7 cut(s)	188, 385, 398, 440, 854, 1552, 1558
MfeI	CAATTG	1 cut(s)	501
MhlI	GDGCHC	3 cut(s)	721, 1051, 1261
MlsI	TGGCCA	1 cut(s)	814
MluNI	TGGCCA	1 cut(s)	814
Mly113I	GGCGCC	1 cut(s)	1426
MlyI	GAGTC	4 cut(s)	663, 801, 892, 1168
MmeI	TCCRAC	2 cut(s)	31, 108
Mox20I	TGGCCA	1 cut(s)	814
MscI	TGGCCA	1 cut(s)	814
MseI	TTAA	7 cut(s)	219, 483, 609, 639, 1308, 1641, 1771
MslI	CAYNNNNRTG	2 cut(s)	1233, 1500
Msp20I	TGGCCA	1 cut(s)	814
MspCI	CTTAAG	1 cut(s)	638
MspI	CCGG	5 cut(s)	90, 895, 1028, 1524, 1571
MspR9I	CCNGG	7 cut(s)	36, 91, 333, 551, 1097, 1389, 1683
MunI	CAATTG	1 cut(s)	501
Mva1269I	GAATGC	1 cut(s)	101
MvaI	CCWGG	6 cut(s)	36, 333, 551, 1097, 1389, 1683
MvnI	CGCG	1 cut(s)	891
MwoI	GCNNNNNNNGC	4 cut(s)	994, 1118, 1265, 1610
NarI	GGCGCC	1 cut(s)	1426
NciI	CCSGG	1 cut(s)	91
NdeI	CATATG	2 cut(s)	680, 906
NdeII	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
NheI	GCTAGC	1 cut(s)	85
NlaIII	CATG	8 cut(s)	329, 467, 829, 982, 1001, 1232, 1499, 1505
NlaIV	GGNNCC	5 cut(s)	872, 873, 1217, 1427, 1680
NmuCI	GTSAC	2 cut(s)	67, 433
NspV	TTCGAA	3 cut(s)	601, 1056, 1740
PagI	TCATGA	3 cut(s)	978, 1228, 1501
PctI	GAATGC	1 cut(s)	101
PfeI	GAWTC	3 cut(s)	1154, 1320, 1658
PflMI	CCANNNNNTGG	1 cut(s)	35
PkrI	GCNGC	2 cut(s)	178, 617
PleI	GAGTC	4 cut(s)	663, 800, 892, 1168
PluTI	GGCGCC	1 cut(s)	1429
PpsI	GAGTC	4 cut(s)	663, 800, 892, 1168
Ppu21I	YACGTR	1 cut(s)	1441
PpuMI	RGGWCCY	1 cut(s)	871
PsiI	TTATAA	2 cut(s)	917, 1458
Psp5II	RGGWCCY	1 cut(s)	871
Psp6I	CCWGG	6 cut(s)	34, 331, 549, 1095, 1387, 1681
PspFI	CCCAGC	3 cut(s)	149, 1146, 1488
PspGI	CCWGG	6 cut(s)	34, 331, 549, 1095, 1387, 1681
PspN4I	GGNNCC	5 cut(s)	872, 873, 1217, 1427, 1680
PspPI	GGNCC	4 cut(s)	329, 362, 871, 1486
PspPPI	RGGWCCY	1 cut(s)	871
PsrI	GAACNNNNNNTAC	2 cut(s)	932, 964
PstI	CTGCAG	1 cut(s)	620
RsaI	GTAC	4 cut(s)	324, 540, 967, 1373
RsaNI	GTAC	4 cut(s)	323, 539, 966, 1372
RseI	CAYNNNNRTG	2 cut(s)	1233, 1500
SalI	GTCGAC	1 cut(s)	1100
SaqAI	TTAA	7 cut(s)	219, 483, 609, 639, 1308, 1641, 1771
SatI	GCNGC	2 cut(s)	177, 616
Sau3AI	GATC	5 cut(s)	262, 628, 1126, 1498, 1552
Sau96I	GGNCC	4 cut(s)	329, 362, 871, 1486
SchI	GAGTC	4 cut(s)	663, 801, 892, 1168
ScrFI	CCNGG	7 cut(s)	36, 91, 333, 551, 1097, 1389, 1683
SduI	GDGCHC	3 cut(s)	721, 1051, 1261
SfaNI	GCATC	6 cut(s)	268, 448, 1108, 1622, 1678, 1734
SfcI	CTRYAG	1 cut(s)	616
SfoI	GGCGCC	1 cut(s)	1427
SfuI	TTCGAA	3 cut(s)	601, 1056, 1740
SinI	GGWCC	2 cut(s)	329, 871
SmiMI	CAYNNNNRTG	2 cut(s)	1233, 1500
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
SpeI	ACTAGT	1 cut(s)	1730
SsiI	CCGC	5 cut(s)	32, 44, 877, 889, 1189
SspDI	GGCGCC	1 cut(s)	1425
SspMI	CTAG	9 cut(s)	86, 519, 765, 945, 1038, 1467, 1476, 1722, 1731
StyD4I	CCNGG	7 cut(s)	34, 89, 331, 549, 1095, 1387, 1681
TaaI	ACNGT	5 cut(s)	380, 804, 1254, 1339, 1473
TaiI	ACGT	1 cut(s)	1443
TatI	WGTACW	1 cut(s)	1371
TfiI	GAWTC	3 cut(s)	1154, 1320, 1658
Tru1I	TTAA	7 cut(s)	219, 483, 609, 639, 1308, 1641, 1771
Tru9I	TTAA	7 cut(s)	219, 483, 609, 639, 1308, 1641, 1771
TscAI	CASTG	3 cut(s)	809, 1259, 1708
TseFI	GTSAC	2 cut(s)	67, 433
TseI	GCWGC	2 cut(s)	176, 615
Tsp45I	GTSAC	2 cut(s)	67, 433
TspDTI	ATGAA	5 cut(s)	174, 491, 864, 953, 1518
TspGWI	ACGGA	3 cut(s)	78, 681, 962
TspRI	CASTG	3 cut(s)	809, 1259, 1708
Van91I	CCANNNNNTGG	1 cut(s)	35
Vha464I	CTTAAG	1 cut(s)	638
VneI	GTGCAC	1 cut(s)	1257
VpaK11BI	GGWCC	2 cut(s)	329, 871
XapI	RAATTY	3 cut(s)	633, 1397, 1745
XbaI	TCTAGA	1 cut(s)	1475
XmiI	GTMKAC	2 cut(s)	795, 1101
XspI	CTAG	9 cut(s)	86, 519, 765, 945, 1038, 1467, 1476, 1722, 1731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.