Poly(A) polymerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAP_NTPase | PF20750 | 1 - 127 | 4.4e-50 | Poly(A) polymerase nucleotidyltransferase domain |
| NTP_transf_2 | PF01909 | 6 - 83 | 3.2e-09 | Nucleotidyltransferase domain |
| PAP_central | PF04928 | 132 - 276 | 5.7e-69 | Poly(A) polymerase central domain |
| PAP_RNA-bind | PF04926 | 280 - 338 | 2.1e-13 | Poly(A) polymerase predicted RNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 856 |
| Acc16I | TGCGCA | 1 cut(s) | 1029 |
| Acc36I | ACCTGC | 2 cut(s) | 856, 1409 |
| Acc65I | GGTACC | 2 cut(s) | 1523, 1531 |
| AccB1I | GGYRCC | 2 cut(s) | 1523, 1531 |
| AccI | GTMKAC | 2 cut(s) | 1004, 1477 |
| AccII | CGCG | 1 cut(s) | 441 |
| AciI | CCGC | 2 cut(s) | 400, 441 |
| AclWI | GGATC | 5 cut(s) | 46, 288, 635, 648, 669 |
| AcoI | YGGCCR | 1 cut(s) | 581 |
| AcsI | RAATTY | 3 cut(s) | 212, 366, 1607 |
| AcuI | CTGAAG | 5 cut(s) | 818, 962, 1435, 1614, 1881 |
| AdeI | CACNNNGTG | 1 cut(s) | 573 |
| AfaI | GTAC | 6 cut(s) | 566, 594, 736, 1525, 1533, 1653 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1387, 1487, 1890 |
| AflII | CTTAAG | 1 cut(s) | 371 |
| AflIII | ACRYGT | 2 cut(s) | 742, 1167 |
| AgsI | TTSAA | 8 cut(s) | 179, 217, 421, 606, 827, 949, 1550, 1703 |
| AjnI | CCWGG | 2 cut(s) | 64, 1156 |
| AleI | CACNNNNGTG | 1 cut(s) | 412 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1426, 1458 |
| AluBI | AGCT | 8 cut(s) | 71, 376, 514, 796, 940, 1198, 1449, 1592 |
| AluI | AGCT | 8 cut(s) | 71, 376, 514, 796, 940, 1198, 1449, 1592 |
| Alw21I | GWGCWC | 2 cut(s) | 396, 820 |
| Alw26I | GTCTC | 4 cut(s) | 730, 954, 1239, 1751 |
| AlwI | GGATC | 5 cut(s) | 46, 288, 635, 648, 669 |
| AoxI | GGCC | 4 cut(s) | 62, 581, 1292, 1346 |
| ApeKI | GCWGC | 2 cut(s) | 881, 1195 |
| ApoI | RAATTY | 3 cut(s) | 212, 366, 1607 |
| AseI | ATTAAT | 1 cut(s) | 1323 |
| Asp718I | GGTACC | 2 cut(s) | 1523, 1531 |
| AspLEI | GCGC | 2 cut(s) | 441, 1030 |
| AspS9I | GGNCC | 4 cut(s) | 55, 62, 95, 1292 |
| AsuHPI | GGTGA | 2 cut(s) | 934, 1921 |
| AsuII | TTCGAA | 1 cut(s) | 334 |
| AvaII | GGWCC | 2 cut(s) | 55, 95 |
| AxyI | CCTNAGG | 1 cut(s) | 657 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1515, 1515, 1548, 1548, 1643, 1676 |
| BalI | TGGCCA | 1 cut(s) | 583 |
| BamHI | GGATCC | 1 cut(s) | 640 |
| BanI | GGYRCC | 2 cut(s) | 1523, 1531 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 159, 191 |
| BauI | CACGAG | 1 cut(s) | 1342 |
| BbsI | GAAGAC | 1 cut(s) | 1204 |
| Bbv12I | GWGCWC | 2 cut(s) | 396, 820 |
| BbvI | GCAGC | 2 cut(s) | 893, 1207 |
| BccI | CCATC | 5 cut(s) | 106, 993, 1156, 1214, 1577 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 314, 348 |
| BciT130I | CCWGG | 2 cut(s) | 66, 1158 |
| BciVI | GTATCC | 1 cut(s) | 1411 |
| BcoDI | GTCTC | 4 cut(s) | 730, 954, 1239, 1751 |
| BfaI | CTAG | 4 cut(s) | 534, 714, 1358, 1446 |
| BfmI | CTRYAG | 2 cut(s) | 863, 1614 |
| BfrI | CTTAAG | 1 cut(s) | 371 |
| BfuAI | ACCTGC | 2 cut(s) | 856, 1409 |
| BfuI | GTATCC | 1 cut(s) | 1411 |
| BisI | GCNGC | 2 cut(s) | 882, 1196 |
| BlsI | GCNGC | 2 cut(s) | 883, 1197 |
| BmcAI | AGTACT | 1 cut(s) | 736 |
| Bme1390I | CCNGG | 2 cut(s) | 66, 1158 |
| Bme18I | GGWCC | 2 cut(s) | 55, 95 |
| BmgT120I | GGNCC | 4 cut(s) | 55, 62, 95, 1292 |
| BmiI | GGNNCC | 5 cut(s) | 56, 642, 1525, 1533, 1895 |
| BmrFI | CCNGG | 2 cut(s) | 66, 1158 |
| BmrI | ACTGGG | 1 cut(s) | 197 |
| BmsI | GCATC | 3 cut(s) | 181, 877, 1022 |
| BmuI | ACTGGG | 1 cut(s) | 197 |
| BpiI | GAAGAC | 1 cut(s) | 1204 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1748, 1780 |
| BpmI | CTGGAG | 3 cut(s) | 87, 1506, 1529 |
| Bpu14I | TTCGAA | 1 cut(s) | 334 |
| BsaAI | YACGTR | 2 cut(s) | 743, 1103 |
| BsaI | GGTCTC | 1 cut(s) | 1239 |
| BsaJI | CCNNGG | 5 cut(s) | 58, 766, 1157, 1527, 1683 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1387, 1487, 1890 |
| Bse1I | ACTGG | 6 cut(s) | 203, 466, 808, 1489, 1512, 1774 |
| Bse21I | CCTNAGG | 1 cut(s) | 657 |
| Bse3DI | GCAATG | 1 cut(s) | 319 |
| BseBI | CCWGG | 2 cut(s) | 66, 1158 |
| BseDI | CCNNGG | 5 cut(s) | 58, 766, 1157, 1527, 1683 |
| BseGI | GGATG | 6 cut(s) | 16, 144, 985, 1013, 1167, 1654 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1387, 1487, 1890 |
| BseMI | GCAATG | 1 cut(s) | 319 |
| BseMII | CTCAG | 5 cut(s) | 306, 424, 584, 671, 741 |
| BseNI | ACTGG | 6 cut(s) | 203, 466, 808, 1489, 1512, 1774 |
| BseRI | GAGGAG | 2 cut(s) | 131, 800 |
| BseXI | GCAGC | 2 cut(s) | 893, 1207 |
| Bsh1236I | CGCG | 1 cut(s) | 441 |
| BshFI | GGCC | 4 cut(s) | 64, 583, 1294, 1348 |
| BshNI | GGYRCC | 2 cut(s) | 1523, 1531 |
| BsiHKAI | GWGCWC | 2 cut(s) | 396, 820 |
| BsiSI | CCGG | 1 cut(s) | 1189 |
| BslFI | GGGAC | 3 cut(s) | 185, 257, 1727 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1387, 1487, 1890 |
| BsmAI | GTCTC | 4 cut(s) | 730, 954, 1239, 1751 |
| BsmFI | GGGAC | 3 cut(s) | 185, 257, 1727 |
| BsmI | GAATGC | 2 cut(s) | 978, 1861 |
| BsnI | GGCC | 4 cut(s) | 64, 583, 1294, 1348 |
| Bso31I | GGTCTC | 1 cut(s) | 1239 |
| Bsp119I | TTCGAA | 1 cut(s) | 334 |
| Bsp1286I | GDGCHC | 2 cut(s) | 396, 820 |
| Bsp1407I | TGTACA | 1 cut(s) | 564 |
| Bsp143I | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| Bsp19I | CCATGG | 3 cut(s) | 58, 766, 1527 |
| BspACI | CCGC | 2 cut(s) | 400, 441 |
| BspANI | GGCC | 4 cut(s) | 64, 583, 1294, 1348 |
| BspCNI | CTCAG | 5 cut(s) | 305, 423, 583, 670, 740 |
| BspFNI | CGCG | 1 cut(s) | 441 |
| BspHI | TCATGA | 1 cut(s) | 207 |
| BspLI | GGNNCC | 5 cut(s) | 56, 642, 1525, 1533, 1895 |
| BspMAI | CTGCAG | 1 cut(s) | 867 |
| BspMI | ACCTGC | 2 cut(s) | 856, 1409 |
| BspPI | GGATC | 5 cut(s) | 46, 288, 635, 648, 669 |
| BspT104I | TTCGAA | 1 cut(s) | 334 |
| BspT107I | GGYRCC | 2 cut(s) | 1523, 1531 |
| BspTI | CTTAAG | 1 cut(s) | 371 |
| BspTNI | GGTCTC | 1 cut(s) | 1239 |
| BsrDI | GCAATG | 1 cut(s) | 319 |
| BsrGI | TGTACA | 1 cut(s) | 564 |
| BsrI | ACTGG | 6 cut(s) | 203, 466, 808, 1489, 1512, 1774 |
| BssECI | CCNNGG | 5 cut(s) | 58, 766, 1157, 1527, 1683 |
| BssMI | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| BssNAI | GTATAC | 1 cut(s) | 1005 |
| BssSI | CACGAG | 1 cut(s) | 1342 |
| BssT1I | CCWWGG | 4 cut(s) | 58, 766, 1527, 1683 |
| Bst1107I | GTATAC | 1 cut(s) | 1005 |
| Bst2BI | CACGAG | 1 cut(s) | 1342 |
| Bst2UI | CCWGG | 2 cut(s) | 66, 1158 |
| Bst4CI | ACNGT | 4 cut(s) | 331, 1111, 1233, 1618 |
| Bst6I | CTCTTC | 3 cut(s) | 156, 606, 1629 |
| BstAFI | CTTAAG | 1 cut(s) | 371 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 887 |
| BstAUI | TGTACA | 1 cut(s) | 564 |
| BstBAI | YACGTR | 2 cut(s) | 743, 1103 |
| BstBI | TTCGAA | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 2 cut(s) | 253, 1259 |
| BstDEI | CTNAG | 6 cut(s) | 292, 410, 570, 657, 727, 932 |
| BstDSI | CCRYGG | 3 cut(s) | 58, 766, 1527 |
| BstEII | GGTNACC | 1 cut(s) | 627 |
| BstF5I | GGATG | 6 cut(s) | 16, 144, 985, 1013, 1167, 1654 |
| BstFNI | CGCG | 1 cut(s) | 441 |
| BstHHI | GCGC | 2 cut(s) | 441, 1030 |
| BstKTI | GATC | 6 cut(s) | 41, 241, 283, 364, 643, 664 |
| BstMAI | GTCTC | 4 cut(s) | 730, 954, 1239, 1751 |
| BstMBI | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 438, 887, 937, 1027, 1034, 1598 |
| BstNI | CCWGG | 2 cut(s) | 66, 1158 |
| BstNSI | RCATGY | 2 cut(s) | 1171, 1695 |
| BstPI | GGTNACC | 1 cut(s) | 627 |
| BstSCI | CCNGG | 2 cut(s) | 64, 1156 |
| BstSFI | CTRYAG | 2 cut(s) | 863, 1614 |
| BstUI | CGCG | 1 cut(s) | 441 |
| BstV1I | GCAGC | 2 cut(s) | 893, 1207 |
| BstV2I | GAAGAC | 1 cut(s) | 1204 |
| BstX2I | RGATCY | 2 cut(s) | 280, 640 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 65 |
| BstYI | RGATCY | 2 cut(s) | 280, 640 |
| BstZ17I | GTATAC | 1 cut(s) | 1005 |
| Bsu36I | CCTNAGG | 1 cut(s) | 657 |
| BsuI | GTATCC | 1 cut(s) | 1411 |
| BsuRI | GGCC | 4 cut(s) | 64, 583, 1294, 1348 |
| BtgI | CCRYGG | 3 cut(s) | 58, 766, 1527 |
| BtgZI | GCGATG | 1 cut(s) | 1555 |
| BtsCI | GGATG | 6 cut(s) | 16, 144, 985, 1013, 1167, 1654 |
| BtsIMutI | CAGTG | 3 cut(s) | 578, 815, 986 |
| BveI | ACCTGC | 2 cut(s) | 856, 1409 |
| Cac8I | GCNNGC | 2 cut(s) | 253, 1259 |
| CciI | TCATGA | 1 cut(s) | 207 |
| CfoI | GCGC | 2 cut(s) | 441, 1030 |
| Cfr13I | GGNCC | 4 cut(s) | 55, 62, 95, 1292 |
| CseI | GACGC | 1 cut(s) | 1019 |
| Csp6I | GTAC | 6 cut(s) | 565, 593, 735, 1524, 1532, 1652 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1480, 1515 |
| CviQI | GTAC | 6 cut(s) | 565, 593, 735, 1524, 1532, 1652 |
| DdeI | CTNAG | 6 cut(s) | 292, 410, 570, 657, 727, 932 |
| DpnI | GATC | 6 cut(s) | 40, 240, 282, 363, 642, 663 |
| DpnII | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| DraIII | CACNNNGTG | 1 cut(s) | 573 |
| EaeI | YGGCCR | 1 cut(s) | 581 |
| Eam1104I | CTCTTC | 3 cut(s) | 156, 606, 1629 |
| EarI | CTCTTC | 3 cut(s) | 156, 606, 1629 |
| Eco130I | CCWWGG | 4 cut(s) | 58, 766, 1527, 1683 |
| Eco31I | GGTCTC | 1 cut(s) | 1239 |
| Eco47I | GGWCC | 2 cut(s) | 55, 95 |
| Eco57I | CTGAAG | 5 cut(s) | 818, 962, 1435, 1614, 1881 |
| Eco81I | CCTNAGG | 1 cut(s) | 657 |
| Eco91I | GGTNACC | 1 cut(s) | 627 |
| EcoO65I | GGTNACC | 1 cut(s) | 627 |
| EcoRI | GAATTC | 1 cut(s) | 1607 |
| EcoRII | CCWGG | 2 cut(s) | 64, 1156 |
| EcoT14I | CCWWGG | 4 cut(s) | 58, 766, 1527, 1683 |
| ErhI | CCWWGG | 4 cut(s) | 58, 766, 1527, 1683 |
| FaqI | GGGAC | 3 cut(s) | 185, 257, 1727 |
| FauNDI | CATATG | 3 cut(s) | 103, 675, 1922 |
| FblI | GTMKAC | 2 cut(s) | 1004, 1477 |
| Fnu4HI | GCNGC | 2 cut(s) | 882, 1196 |
| FokI | GGATG | 6 cut(s) | 23, 131, 972, 1000, 1174, 1641 |
| Fsp4HI | GCNGC | 2 cut(s) | 882, 1196 |
| FspAI | RTGCGCAY | 1 cut(s) | 1029 |
| FspBI | CTAG | 4 cut(s) | 534, 714, 1358, 1446 |
| FspI | TGCGCA | 1 cut(s) | 1029 |
| GlaI | GCGC | 2 cut(s) | 440, 1029 |
| GluI | GCNGC | 2 cut(s) | 882, 1196 |
| GsuI | CTGGAG | 3 cut(s) | 87, 1506, 1529 |
| HaeIII | GGCC | 4 cut(s) | 64, 583, 1294, 1348 |
| HapII | CCGG | 1 cut(s) | 1189 |
| HgaI | GACGC | 1 cut(s) | 1019 |
| HhaI | GCGC | 2 cut(s) | 441, 1030 |
| Hin6I | GCGC | 2 cut(s) | 439, 1028 |
| HinP1I | GCGC | 2 cut(s) | 439, 1028 |
| HincII | GTYRAC | 2 cut(s) | 319, 1810 |
| HindII | GTYRAC | 2 cut(s) | 319, 1810 |
| HindIII | AAGCTT | 1 cut(s) | 374 |
| HinfI | GANTC | 8 cut(s) | 109, 299, 923, 1394, 1565, 1583, 1679, 1763 |
| HpaII | CCGG | 1 cut(s) | 1189 |
| HphI | GGTGA | 2 cut(s) | 934, 1921 |
| Hpy188I | TCNGA | 9 cut(s) | 295, 342, 504, 560, 1606, 1633, 1678, 1839, 1893 |
| HpyAV | CCTTC | 6 cut(s) | 904, 1058, 1076, 1262, 1638, 1856 |
| HpyCH4III | ACNGT | 4 cut(s) | 331, 1111, 1233, 1618 |
| HpyCH4IV | ACGT | 2 cut(s) | 742, 1102 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 438, 887, 937, 1027, 1034, 1598 |
| HpyF3I | CTNAG | 6 cut(s) | 292, 410, 570, 657, 727, 932 |
| HpySE526I | ACGT | 2 cut(s) | 742, 1102 |
| HspAI | GCGC | 2 cut(s) | 439, 1028 |
| KpnI | GGTACC | 2 cut(s) | 1527, 1535 |
| Kzo9I | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| LmnI | GCTCC | 1 cut(s) | 68 |
| Lsp1109I | GCAGC | 2 cut(s) | 893, 1207 |
| LweI | GCATC | 3 cut(s) | 181, 877, 1022 |
| MaeI | CTAG | 4 cut(s) | 534, 714, 1358, 1446 |
| MaeII | ACGT | 2 cut(s) | 742, 1102 |
| MaeIII | GTNAC | 5 cut(s) | 166, 457, 627, 716, 770 |
| MalI | GATC | 6 cut(s) | 40, 240, 282, 363, 642, 663 |
| MboI | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| MboII | GAAGA | 9 cut(s) | 173, 623, 811, 832, 961, 1204, 1292, 1646, 1759 |
| MfeI | CAATTG | 2 cut(s) | 234, 1900 |
| MflI | RGATCY | 2 cut(s) | 280, 640 |
| MhlI | GDGCHC | 2 cut(s) | 396, 820 |
| MlsI | TGGCCA | 1 cut(s) | 583 |
| MluNI | TGGCCA | 1 cut(s) | 583 |
| MlyI | GAGTC | 3 cut(s) | 1403, 1574, 1757 |
| MmeI | TCCRAC | 3 cut(s) | 73, 1702, 1871 |
| Mox20I | TGGCCA | 1 cut(s) | 583 |
| MscI | TGGCCA | 1 cut(s) | 583 |
| MseI | TTAA | 3 cut(s) | 372, 1323, 1871 |
| MslI | CAYNNNNRTG | 1 cut(s) | 412 |
| Msp20I | TGGCCA | 1 cut(s) | 583 |
| MspCI | CTTAAG | 1 cut(s) | 371 |
| MspI | CCGG | 1 cut(s) | 1189 |
| MspR9I | CCNGG | 2 cut(s) | 66, 1158 |
| MunI | CAATTG | 2 cut(s) | 234, 1900 |
| Mva1269I | GAATGC | 2 cut(s) | 978, 1861 |
| MvaI | CCWGG | 2 cut(s) | 66, 1158 |
| MvnI | CGCG | 1 cut(s) | 441 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 438, 887, 937, 1027, 1034, 1598 |
| NcoI | CCATGG | 3 cut(s) | 58, 766, 1527 |
| NdeI | CATATG | 3 cut(s) | 103, 675, 1922 |
| NdeII | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| NlaIV | GGNNCC | 5 cut(s) | 56, 642, 1525, 1533, 1895 |
| NmeAIII | GCCGAG | 2 cut(s) | 907, 1374 |
| NsbI | TGCGCA | 1 cut(s) | 1029 |
| NspI | RCATGY | 2 cut(s) | 1171, 1695 |
| NspV | TTCGAA | 1 cut(s) | 334 |
| OliI | CACNNNNGTG | 1 cut(s) | 412 |
| PagI | TCATGA | 1 cut(s) | 207 |
| PaqCI | CACCTGC | 1 cut(s) | 856 |
| PciI | ACATGT | 1 cut(s) | 1167 |
| PctI | GAATGC | 2 cut(s) | 978, 1861 |
| PfeI | GAWTC | 5 cut(s) | 109, 299, 923, 1583, 1679 |
| PkrI | GCNGC | 2 cut(s) | 883, 1197 |
| PleI | GAGTC | 3 cut(s) | 1402, 1573, 1757 |
| PpsI | GAGTC | 3 cut(s) | 1402, 1573, 1757 |
| Ppu21I | YACGTR | 2 cut(s) | 743, 1103 |
| PscI | ACATGT | 1 cut(s) | 1167 |
| PshBI | ATTAAT | 1 cut(s) | 1323 |
| Psp6I | CCWGG | 2 cut(s) | 64, 1156 |
| PspEI | GGTNACC | 1 cut(s) | 627 |
| PspGI | CCWGG | 2 cut(s) | 64, 1156 |
| PspN4I | GGNNCC | 5 cut(s) | 56, 642, 1525, 1533, 1895 |
| PspPI | GGNCC | 4 cut(s) | 55, 62, 95, 1292 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 612, 644, 701, 733 |
| PstI | CTGCAG | 1 cut(s) | 867 |
| PsuI | RGATCY | 2 cut(s) | 280, 640 |
| RsaI | GTAC | 6 cut(s) | 566, 594, 736, 1525, 1533, 1653 |
| RsaNI | GTAC | 6 cut(s) | 565, 593, 735, 1524, 1532, 1652 |
| RseI | CAYNNNNRTG | 1 cut(s) | 412 |
| SaqAI | TTAA | 3 cut(s) | 372, 1323, 1871 |
| SatI | GCNGC | 2 cut(s) | 882, 1196 |
| Sau3AI | GATC | 6 cut(s) | 38, 238, 280, 361, 640, 661 |
| Sau96I | GGNCC | 4 cut(s) | 55, 62, 95, 1292 |
| ScaI | AGTACT | 1 cut(s) | 736 |
| SchI | GAGTC | 3 cut(s) | 1403, 1574, 1757 |
| ScrFI | CCNGG | 2 cut(s) | 66, 1158 |
| SduI | GDGCHC | 2 cut(s) | 396, 820 |
| SfaNI | GCATC | 3 cut(s) | 181, 877, 1022 |
| SfcI | CTRYAG | 2 cut(s) | 863, 1614 |
| SfuI | TTCGAA | 1 cut(s) | 334 |
| SinI | GGWCC | 2 cut(s) | 55, 95 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 412 |
| SmlI | CTYRAG | 1 cut(s) | 371 |
| SmoI | CTYRAG | 1 cut(s) | 371 |
| SsiI | CCGC | 2 cut(s) | 400, 441 |
| SspMI | CTAG | 4 cut(s) | 534, 714, 1358, 1446 |
| StyD4I | CCNGG | 2 cut(s) | 64, 1156 |
| StyI | CCWWGG | 4 cut(s) | 58, 766, 1527, 1683 |
| TaaI | ACNGT | 4 cut(s) | 331, 1111, 1233, 1618 |
| TaiI | ACGT | 2 cut(s) | 745, 1105 |
| TaqI | TCGA | 5 cut(s) | 112, 334, 843, 1113, 1237 |
| TatI | WGTACW | 3 cut(s) | 564, 592, 734 |
| TfiI | GAWTC | 5 cut(s) | 109, 299, 923, 1583, 1679 |
| Tru1I | TTAA | 3 cut(s) | 372, 1323, 1871 |
| Tru9I | TTAA | 3 cut(s) | 372, 1323, 1871 |
| TscAI | CASTG | 3 cut(s) | 578, 815, 986 |
| TseI | GCWGC | 2 cut(s) | 881, 1195 |
| TspDTI | ATGAA | 8 cut(s) | 224, 312, 633, 659, 722, 1281, 1293, 1596 |
| TspGWI | ACGGA | 1 cut(s) | 1647 |
| TspRI | CASTG | 3 cut(s) | 578, 815, 986 |
| Vha464I | CTTAAG | 1 cut(s) | 371 |
| VpaK11BI | GGWCC | 2 cut(s) | 55, 95 |
| VspI | ATTAAT | 1 cut(s) | 1323 |
| XapI | RAATTY | 3 cut(s) | 212, 366, 1607 |
| XceI | RCATGY | 2 cut(s) | 1171, 1695 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1534 |
| XmiI | GTMKAC | 2 cut(s) | 1004, 1477 |
| XspI | CTAG | 4 cut(s) | 534, 714, 1358, 1446 |
| ZrmI | AGTACT | 1 cut(s) | 736 |