Poly(A) polymerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAP_NTPase | PF20750 | 22 - 216 | 1.2e-76 | Poly(A) polymerase nucleotidyltransferase domain |
| NTP_transf_2 | PF01909 | 83 - 172 | 1.8e-11 | Nucleotidyltransferase domain |
| PAP_central | PF04928 | 221 - 365 | 1.7e-67 | Poly(A) polymerase central domain |
| PAP_RNA-bind | PF04926 | 369 - 426 | 2e-09 | Poly(A) polymerase predicted RNA binding domain |
| PAP_RNA-bind | PF04926 | 426 - 501 | 1.3e-06 | Poly(A) polymerase predicted RNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 953 |
| Acc16I | TGCGCA | 1 cut(s) | 1294 |
| AccII | CGCG | 1 cut(s) | 708 |
| AciI | CCGC | 5 cut(s) | 29, 708, 741, 844, 1625 |
| AclWI | GGATC | 2 cut(s) | 1596, 1864 |
| AcoI | YGGCCR | 1 cut(s) | 848 |
| AcsI | RAATTY | 5 cut(s) | 479, 633, 689, 976, 1431 |
| AcuI | CTGAAG | 1 cut(s) | 1598 |
| AdeI | CACNNNGTG | 1 cut(s) | 1301 |
| AfaI | GTAC | 8 cut(s) | 62, 257, 540, 578, 1003, 1100, 1406, 1807 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1528, 1663 |
| AflIII | ACRYGT | 3 cut(s) | 348, 1101, 1407 |
| AgsI | TTSAA | 6 cut(s) | 688, 878, 1066, 1112, 1223, 1824 |
| AjnI | CCWGG | 6 cut(s) | 331, 549, 1131, 1420, 1783, 1924 |
| AluBI | AGCT | 8 cut(s) | 442, 643, 984, 1073, 1116, 1547, 1872, 1967 |
| AluI | AGCT | 8 cut(s) | 442, 643, 984, 1073, 1116, 1547, 1872, 1967 |
| Alw21I | GWGCWC | 3 cut(s) | 28, 663, 1075 |
| Alw26I | GTCTC | 1 cut(s) | 1564 |
| AlwI | GGATC | 2 cut(s) | 1596, 1864 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1865 |
| Ama87I | CYCGRG | 2 cut(s) | 317, 768 |
| AoxI | GGCC | 3 cut(s) | 92, 362, 848 |
| ApeKI | GCWGC | 5 cut(s) | 50, 442, 615, 1148, 1525 |
| ApoI | RAATTY | 5 cut(s) | 479, 633, 689, 976, 1431 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 380, 412 |
| AseI | ATTAAT | 1 cut(s) | 1398 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1341 |
| AspLEI | GCGC | 1 cut(s) | 1295 |
| AspS9I | GGNCC | 6 cut(s) | 92, 306, 329, 362, 907, 1519 |
| AsuC2I | CCSGG | 3 cut(s) | 91, 769, 770 |
| AsuHPI | GGTGA | 7 cut(s) | 16, 241, 445, 1346, 1618, 1784, 1952 |
| AsuII | TTCGAA | 1 cut(s) | 601 |
| AvaI | CYCGRG | 2 cut(s) | 317, 768 |
| AvaII | GGWCC | 4 cut(s) | 306, 329, 907, 1519 |
| BalI | TGGCCA | 1 cut(s) | 850 |
| BanII | GRGCYC | 2 cut(s) | 757, 1075 |
| BauI | CACGAG | 1 cut(s) | 924 |
| BbsI | GAAGAC | 2 cut(s) | 393, 552 |
| Bbv12I | GWGCWC | 3 cut(s) | 28, 663, 1075 |
| BbvI | GCAGC | 5 cut(s) | 62, 429, 602, 1135, 1537 |
| BccI | CCATC | 8 cut(s) | 373, 418, 1260, 1373, 1420, 1478, 1532, 1589 |
| BceAI | ACGGC | 1 cut(s) | 1081 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 224, 258, 1151, 1185 |
| BciT130I | CCWGG | 6 cut(s) | 333, 551, 1133, 1422, 1785, 1926 |
| BciVI | GTATCC | 2 cut(s) | 1222, 1488 |
| BcnI | CCSGG | 3 cut(s) | 91, 769, 770 |
| BcoDI | GTCTC | 1 cut(s) | 1564 |
| BfaI | CTAG | 5 cut(s) | 519, 981, 1563, 1644, 1887 |
| BfmI | CTRYAG | 2 cut(s) | 310, 616 |
| BfuI | GTATCC | 2 cut(s) | 1222, 1488 |
| BisI | GCNGC | 5 cut(s) | 51, 443, 616, 1149, 1526 |
| BlsI | GCNGC | 5 cut(s) | 52, 444, 617, 1150, 1527 |
| BmcAI | AGTACT | 2 cut(s) | 1003, 1807 |
| Bme1390I | CCNGG | 9 cut(s) | 91, 333, 551, 769, 770, 1133, 1422, 1785, 1926 |
| Bme18I | GGWCC | 4 cut(s) | 306, 329, 907, 1519 |
| BmeT110I | CYCGRG | 2 cut(s) | 317, 768 |
| BmgT120I | GGNCC | 6 cut(s) | 92, 306, 329, 362, 907, 1519 |
| BmiI | GGNNCC | 4 cut(s) | 307, 908, 909, 1782 |
| BmrFI | CCNGG | 9 cut(s) | 91, 333, 551, 769, 770, 1133, 1422, 1785, 1926 |
| BmrI | ACTGGG | 1 cut(s) | 760 |
| BmsI | GCATC | 6 cut(s) | 136, 448, 671, 1712, 1834, 1973 |
| BmuI | ACTGGG | 1 cut(s) | 760 |
| BoxI | GACNNNNGTC | 1 cut(s) | 101 |
| BpiI | GAAGAC | 2 cut(s) | 393, 552 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1943, 1975 |
| BpmI | CTGGAG | 2 cut(s) | 1115, 1692 |
| Bpu14I | TTCGAA | 1 cut(s) | 601 |
| BpuEI | CTTGAG | 2 cut(s) | 27, 268 |
| BpuMI | CCSGG | 3 cut(s) | 91, 769, 770 |
| Bsa29I | ATCGAT | 2 cut(s) | 500, 585 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1855 |
| BsaJI | CCNNGG | 6 cut(s) | 12, 332, 768, 1421, 1657, 1924 |
| BsaWI | WCCGGW | 1 cut(s) | 930 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1528, 1663 |
| Bse1I | ACTGG | 4 cut(s) | 449, 733, 755, 1803 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1855 |
| BseBI | CCWGG | 6 cut(s) | 333, 551, 1133, 1422, 1785, 1926 |
| BseCI | ATCGAT | 2 cut(s) | 500, 585 |
| BseDI | CCNNGG | 6 cut(s) | 12, 332, 768, 1421, 1657, 1924 |
| BseGI | GGATG | 6 cut(s) | 365, 889, 1245, 1252, 1431, 1988 |
| BseJI | GATNNNNATC | 1 cut(s) | 1855 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1528, 1663 |
| BseMII | CTCAG | 4 cut(s) | 104, 411, 691, 1190 |
| BseNI | ACTGG | 4 cut(s) | 449, 733, 755, 1803 |
| BseRI | GAGGAG | 1 cut(s) | 203 |
| BseXI | GCAGC | 5 cut(s) | 62, 429, 602, 1135, 1537 |
| BseYI | CCCAGC | 4 cut(s) | 149, 800, 1182, 1936 |
| Bsh1236I | CGCG | 1 cut(s) | 708 |
| Bsh1285I | CGRYCG | 1 cut(s) | 504 |
| BshFI | GGCC | 3 cut(s) | 94, 364, 850 |
| BshVI | ATCGAT | 2 cut(s) | 500, 585 |
| BsiEI | CGRYCG | 1 cut(s) | 504 |
| BsiHKAI | GWGCWC | 3 cut(s) | 28, 663, 1075 |
| BsiHKCI | CYCGRG | 2 cut(s) | 317, 768 |
| BsiSI | CCGG | 3 cut(s) | 90, 769, 931 |
| BslFI | GGGAC | 4 cut(s) | 452, 855, 920, 1384 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1528, 1663 |
| BsmAI | GTCTC | 1 cut(s) | 1564 |
| BsmFI | GGGAC | 4 cut(s) | 452, 855, 920, 1384 |
| BsmI | GAATGC | 2 cut(s) | 1295, 1390 |
| BsnI | GGCC | 3 cut(s) | 94, 364, 850 |
| BsoBI | CYCGRG | 2 cut(s) | 317, 768 |
| Bsp119I | TTCGAA | 1 cut(s) | 601 |
| Bsp1286I | GDGCHC | 4 cut(s) | 28, 663, 757, 1075 |
| Bsp1407I | TGTACA | 2 cut(s) | 576, 1404 |
| Bsp143I | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| Bsp19I | CCATGG | 1 cut(s) | 1657 |
| BspACI | CCGC | 5 cut(s) | 29, 708, 741, 844, 1625 |
| BspANI | GGCC | 3 cut(s) | 94, 364, 850 |
| BspCNI | CTCAG | 4 cut(s) | 105, 412, 690, 1191 |
| BspDI | ATCGAT | 2 cut(s) | 500, 585 |
| BspFNI | CGCG | 1 cut(s) | 708 |
| BspLI | GGNNCC | 4 cut(s) | 307, 908, 909, 1782 |
| BspMAI | CTGCAG | 1 cut(s) | 620 |
| BspPI | GGATC | 2 cut(s) | 1596, 1864 |
| BspQI | GCTCTTC | 1 cut(s) | 762 |
| BspT104I | TTCGAA | 1 cut(s) | 601 |
| BsrGI | TGTACA | 2 cut(s) | 576, 1404 |
| BsrI | ACTGG | 4 cut(s) | 449, 733, 755, 1803 |
| BssECI | CCNNGG | 6 cut(s) | 12, 332, 768, 1421, 1657, 1924 |
| BssMI | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| BssSI | CACGAG | 1 cut(s) | 924 |
| BssT1I | CCWWGG | 1 cut(s) | 1657 |
| Bst2BI | CACGAG | 1 cut(s) | 924 |
| Bst2UI | CCWGG | 6 cut(s) | 333, 551, 1133, 1422, 1785, 1926 |
| Bst4CI | ACNGT | 6 cut(s) | 598, 840, 1248, 1375, 1767, 2004 |
| Bst6I | CTCTTC | 4 cut(s) | 423, 762, 873, 1574 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1301, 1700 |
| BstAUI | TGTACA | 2 cut(s) | 576, 1404 |
| BstBI | TTCGAA | 1 cut(s) | 601 |
| BstC8I | GCNNGC | 4 cut(s) | 806, 1170, 1530, 1696 |
| BstDEI | CTNAG | 4 cut(s) | 113, 420, 677, 1199 |
| BstDSI | CCRYGG | 1 cut(s) | 1657 |
| BstEII | GGTNACC | 1 cut(s) | 433 |
| BstF5I | GGATG | 6 cut(s) | 365, 889, 1245, 1252, 1431, 1988 |
| BstFNI | CGCG | 1 cut(s) | 708 |
| BstHHI | GCGC | 1 cut(s) | 1295 |
| BstKTI | GATC | 5 cut(s) | 265, 504, 631, 1591, 1859 |
| BstMAI | GTCTC | 1 cut(s) | 1564 |
| BstMBI | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| BstMCI | CGRYCG | 1 cut(s) | 504 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 208, 322, 1301, 1633, 1700 |
| BstNI | CCWGG | 6 cut(s) | 333, 551, 1133, 1422, 1785, 1926 |
| BstNSI | RCATGY | 3 cut(s) | 808, 1105, 1411 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 101 |
| BstPI | GGTNACC | 1 cut(s) | 433 |
| BstSCI | CCNGG | 9 cut(s) | 89, 331, 549, 767, 768, 1131, 1420, 1783, 1924 |
| BstSFI | CTRYAG | 2 cut(s) | 310, 616 |
| BstUI | CGCG | 1 cut(s) | 708 |
| BstV1I | GCAGC | 5 cut(s) | 62, 429, 602, 1135, 1537 |
| BstV2I | GAAGAC | 2 cut(s) | 393, 552 |
| BstX2I | RGATCY | 1 cut(s) | 1588 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1516 |
| BstYI | RGATCY | 1 cut(s) | 1588 |
| Bsu15I | ATCGAT | 2 cut(s) | 500, 585 |
| BsuI | GTATCC | 2 cut(s) | 1222, 1488 |
| BsuRI | GGCC | 3 cut(s) | 94, 364, 850 |
| BsuTUI | ATCGAT | 2 cut(s) | 500, 585 |
| BtgI | CCRYGG | 1 cut(s) | 1657 |
| BtsCI | GGATG | 6 cut(s) | 365, 889, 1245, 1252, 1431, 1988 |
| BtsI | GCAGTG | 2 cut(s) | 1705, 1912 |
| BtsIMutI | CAGTG | 6 cut(s) | 845, 1253, 1705, 1763, 1866, 1912 |
| Cac8I | GCNNGC | 4 cut(s) | 806, 1170, 1530, 1696 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1865 |
| CfoI | GCGC | 1 cut(s) | 1295 |
| Cfr13I | GGNCC | 6 cut(s) | 92, 306, 329, 362, 907, 1519 |
| Cfr9I | CCCGGG | 1 cut(s) | 768 |
| ClaI | ATCGAT | 2 cut(s) | 500, 585 |
| CseI | GACGC | 2 cut(s) | 287, 714 |
| Csp6I | GTAC | 8 cut(s) | 61, 256, 539, 577, 1002, 1099, 1405, 1806 |
| CviQI | GTAC | 8 cut(s) | 61, 256, 539, 577, 1002, 1099, 1405, 1806 |
| DdeI | CTNAG | 4 cut(s) | 113, 420, 677, 1199 |
| DpnI | GATC | 5 cut(s) | 264, 503, 630, 1590, 1858 |
| DpnII | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| DraI | TTTAAA | 1 cut(s) | 639 |
| DraIII | CACNNNGTG | 1 cut(s) | 1301 |
| EaeI | YGGCCR | 1 cut(s) | 848 |
| Eam1104I | CTCTTC | 4 cut(s) | 423, 762, 873, 1574 |
| EarI | CTCTTC | 4 cut(s) | 423, 762, 873, 1574 |
| EciI | GGCGGA | 1 cut(s) | 756 |
| Ecl136II | GAGCTC | 1 cut(s) | 1073 |
| Eco130I | CCWWGG | 1 cut(s) | 1657 |
| Eco24I | GRGCYC | 2 cut(s) | 757, 1075 |
| Eco32I | GATATC | 1 cut(s) | 920 |
| Eco47I | GGWCC | 4 cut(s) | 306, 329, 907, 1519 |
| Eco53kI | GAGCTC | 1 cut(s) | 1073 |
| Eco57I | CTGAAG | 1 cut(s) | 1598 |
| Eco88I | CYCGRG | 2 cut(s) | 317, 768 |
| Eco91I | GGTNACC | 1 cut(s) | 433 |
| EcoICRI | GAGCTC | 1 cut(s) | 1073 |
| EcoO109I | RGGNCCY | 2 cut(s) | 306, 907 |
| EcoO65I | GGTNACC | 1 cut(s) | 433 |
| EcoRI | GAATTC | 1 cut(s) | 976 |
| EcoRII | CCWGG | 6 cut(s) | 331, 549, 1131, 1420, 1783, 1924 |
| EcoRV | GATATC | 1 cut(s) | 920 |
| EcoT14I | CCWWGG | 1 cut(s) | 1657 |
| EcoT38I | GRGCYC | 2 cut(s) | 757, 1075 |
| ErhI | CCWWGG | 1 cut(s) | 1657 |
| FaqI | GGGAC | 4 cut(s) | 452, 855, 920, 1384 |
| FauNDI | CATATG | 1 cut(s) | 942 |
| Fnu4HI | GCNGC | 5 cut(s) | 51, 443, 616, 1149, 1526 |
| FokI | GGATG | 6 cut(s) | 352, 896, 1239, 1252, 1438, 1995 |
| FriOI | GRGCYC | 2 cut(s) | 757, 1075 |
| Fsp4HI | GCNGC | 5 cut(s) | 51, 443, 616, 1149, 1526 |
| FspAI | RTGCGCAY | 1 cut(s) | 1294 |
| FspBI | CTAG | 5 cut(s) | 519, 981, 1563, 1644, 1887 |
| FspI | TGCGCA | 1 cut(s) | 1294 |
| GlaI | GCGC | 1 cut(s) | 1294 |
| GluI | GCNGC | 5 cut(s) | 51, 443, 616, 1149, 1526 |
| GsaI | CCCAGC | 4 cut(s) | 153, 804, 1186, 1940 |
| GsuI | CTGGAG | 2 cut(s) | 1115, 1692 |
| HaeIII | GGCC | 3 cut(s) | 94, 364, 850 |
| HapII | CCGG | 3 cut(s) | 90, 769, 931 |
| HgaI | GACGC | 2 cut(s) | 287, 714 |
| HhaI | GCGC | 1 cut(s) | 1295 |
| Hin6I | GCGC | 1 cut(s) | 1293 |
| HinP1I | GCGC | 1 cut(s) | 1293 |
| HincII | GTYRAC | 2 cut(s) | 1138, 1159 |
| HindII | GTYRAC | 2 cut(s) | 1138, 1159 |
| HindIII | AAGCTT | 2 cut(s) | 641, 1545 |
| HinfI | GANTC | 6 cut(s) | 819, 934, 1190, 1609, 1748, 1958 |
| HpaII | CCGG | 3 cut(s) | 90, 769, 931 |
| HphI | GGTGA | 7 cut(s) | 16, 241, 445, 1346, 1618, 1784, 1952 |
| Hpy166II | GTNNAC | 6 cut(s) | 258, 748, 1138, 1159, 1262, 1493 |
| Hpy188I | TCNGA | 7 cut(s) | 13, 114, 562, 680, 1720, 1963, 1975 |
| Hpy8I | GTNNAC | 6 cut(s) | 258, 748, 1138, 1159, 1262, 1493 |
| Hpy99I | CGWCG | 1 cut(s) | 100 |
| HpyAV | CCTTC | 4 cut(s) | 164, 1449, 1579, 1725 |
| HpyCH4III | ACNGT | 6 cut(s) | 598, 840, 1248, 1375, 1767, 2004 |
| HpyCH4IV | ACGT | 1 cut(s) | 350 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 208, 322, 1301, 1633, 1700 |
| HpyF3I | CTNAG | 4 cut(s) | 113, 420, 677, 1199 |
| HpySE526I | ACGT | 1 cut(s) | 350 |
| HspAI | GCGC | 1 cut(s) | 1293 |
| KflI | GGGWCCC | 1 cut(s) | 907 |
| Kzo9I | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| LguI | GCTCTTC | 1 cut(s) | 762 |
| LmnI | GCTCC | 3 cut(s) | 31, 1780, 1890 |
| Lsp1109I | GCAGC | 5 cut(s) | 62, 429, 602, 1135, 1537 |
| LweI | GCATC | 6 cut(s) | 136, 448, 671, 1712, 1834, 1973 |
| MaeI | CTAG | 5 cut(s) | 519, 981, 1563, 1644, 1887 |
| MaeII | ACGT | 1 cut(s) | 350 |
| MaeIII | GTNAC | 7 cut(s) | 67, 433, 724, 926, 1031, 1242, 1916 |
| MalI | GATC | 5 cut(s) | 264, 503, 630, 1590, 1858 |
| MboI | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| MboII | GAAGA | 8 cut(s) | 188, 385, 398, 440, 557, 749, 890, 1591 |
| MflI | RGATCY | 1 cut(s) | 1588 |
| MhlI | GDGCHC | 4 cut(s) | 28, 663, 757, 1075 |
| MlsI | TGGCCA | 1 cut(s) | 850 |
| MluNI | TGGCCA | 1 cut(s) | 850 |
| MlyI | GAGTC | 3 cut(s) | 928, 1757, 1952 |
| MmeI | TCCRAC | 1 cut(s) | 108 |
| Mox20I | TGGCCA | 1 cut(s) | 850 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1341 |
| MscI | TGGCCA | 1 cut(s) | 850 |
| MseI | TTAA | 4 cut(s) | 483, 609, 638, 1398 |
| MslI | CAYNNNNRTG | 3 cut(s) | 679, 1269, 1400 |
| Msp20I | TGGCCA | 1 cut(s) | 850 |
| MspA1I | CMGCKG | 1 cut(s) | 31 |
| MspI | CCGG | 3 cut(s) | 90, 769, 931 |
| MspR9I | CCNGG | 9 cut(s) | 91, 333, 551, 769, 770, 1133, 1422, 1785, 1926 |
| Mva1269I | GAATGC | 2 cut(s) | 1295, 1390 |
| MvaI | CCWGG | 6 cut(s) | 333, 551, 1133, 1422, 1785, 1926 |
| MvnI | CGCG | 1 cut(s) | 708 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 208, 322, 1301, 1633, 1700 |
| NciI | CCSGG | 3 cut(s) | 91, 769, 770 |
| NcoI | CCATGG | 1 cut(s) | 1657 |
| NdeI | CATATG | 1 cut(s) | 942 |
| NdeII | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| NlaIV | GGNNCC | 4 cut(s) | 307, 908, 909, 1782 |
| NmuCI | GTSAC | 3 cut(s) | 67, 433, 926 |
| NsbI | TGCGCA | 1 cut(s) | 1294 |
| NspI | RCATGY | 3 cut(s) | 808, 1105, 1411 |
| NspV | TTCGAA | 1 cut(s) | 601 |
| PaeI | GCATGC | 1 cut(s) | 808 |
| PciI | ACATGT | 2 cut(s) | 1101, 1407 |
| PciSI | GCTCTTC | 1 cut(s) | 762 |
| PctI | GAATGC | 2 cut(s) | 1295, 1390 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1341 |
| PfeI | GAWTC | 3 cut(s) | 819, 1190, 1609 |
| PkrI | GCNGC | 5 cut(s) | 52, 444, 617, 1150, 1527 |
| Ple19I | CGATCG | 1 cut(s) | 504 |
| PleI | GAGTC | 3 cut(s) | 928, 1756, 1952 |
| PpsI | GAGTC | 3 cut(s) | 928, 1756, 1952 |
| PpuMI | RGGWCCY | 2 cut(s) | 306, 907 |
| PscI | ACATGT | 2 cut(s) | 1101, 1407 |
| PshAI | GACNNNNGTC | 1 cut(s) | 101 |
| PshBI | ATTAAT | 1 cut(s) | 1398 |
| PsiI | TTATAA | 1 cut(s) | 953 |
| Psp124BI | GAGCTC | 1 cut(s) | 1075 |
| Psp5II | RGGWCCY | 2 cut(s) | 306, 907 |
| Psp6I | CCWGG | 6 cut(s) | 331, 549, 1131, 1420, 1783, 1924 |
| PspEI | GGTNACC | 1 cut(s) | 433 |
| PspFI | CCCAGC | 4 cut(s) | 149, 800, 1182, 1936 |
| PspGI | CCWGG | 6 cut(s) | 331, 549, 1131, 1420, 1783, 1924 |
| PspN4I | GGNNCC | 4 cut(s) | 307, 908, 909, 1782 |
| PspPI | GGNCC | 6 cut(s) | 92, 306, 329, 362, 907, 1519 |
| PspPPI | RGGWCCY | 2 cut(s) | 306, 907 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1431, 1463 |
| PstI | CTGCAG | 1 cut(s) | 620 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1865 |
| PsuI | RGATCY | 1 cut(s) | 1588 |
| PvuI | CGATCG | 1 cut(s) | 504 |
| RsaI | GTAC | 8 cut(s) | 62, 257, 540, 578, 1003, 1100, 1406, 1807 |
| RsaNI | GTAC | 8 cut(s) | 61, 256, 539, 577, 1002, 1099, 1405, 1806 |
| RseI | CAYNNNNRTG | 3 cut(s) | 679, 1269, 1400 |
| SacI | GAGCTC | 1 cut(s) | 1075 |
| SapI | GCTCTTC | 1 cut(s) | 762 |
| SaqAI | TTAA | 4 cut(s) | 483, 609, 638, 1398 |
| SatI | GCNGC | 5 cut(s) | 51, 443, 616, 1149, 1526 |
| Sau3AI | GATC | 5 cut(s) | 262, 501, 628, 1588, 1856 |
| Sau96I | GGNCC | 6 cut(s) | 92, 306, 329, 362, 907, 1519 |
| ScaI | AGTACT | 2 cut(s) | 1003, 1807 |
| SchI | GAGTC | 3 cut(s) | 928, 1757, 1952 |
| ScrFI | CCNGG | 9 cut(s) | 91, 333, 551, 769, 770, 1133, 1422, 1785, 1926 |
| SduI | GDGCHC | 4 cut(s) | 28, 663, 757, 1075 |
| SfaNI | GCATC | 6 cut(s) | 136, 448, 671, 1712, 1834, 1973 |
| SfcI | CTRYAG | 2 cut(s) | 310, 616 |
| SfuI | TTCGAA | 1 cut(s) | 601 |
| SinI | GGWCC | 4 cut(s) | 306, 329, 907, 1519 |
| SmaI | CCCGGG | 1 cut(s) | 770 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 679, 1269, 1400 |
| SmlI | CTYRAG | 2 cut(s) | 42, 247 |
| SmoI | CTYRAG | 2 cut(s) | 42, 247 |
| SphI | GCATGC | 1 cut(s) | 808 |
| SsiI | CCGC | 5 cut(s) | 29, 708, 741, 844, 1625 |
| SspMI | CTAG | 5 cut(s) | 519, 981, 1563, 1644, 1887 |
| SstI | GAGCTC | 1 cut(s) | 1075 |
| StyD4I | CCNGG | 9 cut(s) | 89, 331, 549, 767, 768, 1131, 1420, 1783, 1924 |
| StyI | CCWWGG | 1 cut(s) | 1657 |
| TaaI | ACNGT | 6 cut(s) | 598, 840, 1248, 1375, 1767, 2004 |
| TaiI | ACGT | 1 cut(s) | 353 |
| TaqII | GACCGA | 1 cut(s) | 452 |
| TatI | WGTACW | 4 cut(s) | 576, 1001, 1404, 1805 |
| TfiI | GAWTC | 3 cut(s) | 819, 1190, 1609 |
| Tru1I | TTAA | 4 cut(s) | 483, 609, 638, 1398 |
| Tru9I | TTAA | 4 cut(s) | 483, 609, 638, 1398 |
| TscAI | CASTG | 6 cut(s) | 845, 1253, 1705, 1770, 1866, 1912 |
| TseFI | GTSAC | 3 cut(s) | 67, 433, 926 |
| TseI | GCWGC | 5 cut(s) | 50, 442, 615, 1148, 1525 |
| Tsp45I | GTSAC | 3 cut(s) | 67, 433, 926 |
| TspDTI | ATGAA | 5 cut(s) | 174, 491, 900, 989, 1424 |
| TspGWI | ACGGA | 4 cut(s) | 78, 113, 507, 1050 |
| TspMI | CCCGGG | 1 cut(s) | 768 |
| TspRI | CASTG | 6 cut(s) | 845, 1253, 1705, 1770, 1866, 1912 |
| VpaK11BI | GGWCC | 4 cut(s) | 306, 329, 907, 1519 |
| VspI | ATTAAT | 1 cut(s) | 1398 |
| XapI | RAATTY | 5 cut(s) | 479, 633, 689, 976, 1431 |
| XceI | RCATGY | 3 cut(s) | 808, 1105, 1411 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1629 |
| XmaI | CCCGGG | 1 cut(s) | 768 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1341 |
| XspI | CTAG | 5 cut(s) | 519, 981, 1563, 1644, 1887 |
| ZrmI | AGTACT | 2 cut(s) | 1003, 1807 |