Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000796

Physical Location & Seq

Genomic Coordinates Forward (+)

16736032 .. 16742208

Gene Structure 6177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g23640.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGAGCAACGTGCCTAAAGAAGCGATTGAGGTCATAGCACAGAGCATTGGCATTACCAATTTGTCTCCTGATGTTGCTCTTGCTCTCACCCCTGATGTCGAGTACCGCGTTCGCGAGATCATGCAGGAGGCCATCAAATGTATGAGGCACTCGCGACGGACTATTCTTACAACCGATGATGTGGATGGCGCACTTAAATTGAGAAATGTGGAGCCAATTTATGGCTTTGCTTCTGGAGATCCTTTGAGGTTCAAGAGAGCTGCTGGACATAGGGATTTGTTCTACATAGATGACAAGGATGTTGAATTCAAAGATGTGATTGAGGCACCTTTGCCAAAAGCACCATTTGATGTATCAGTTGCTGCTCACTGGCTGGCAATCGAAGGTGTTCAACCTGCAATTCCAGAAAATGCTCCAGTTGAAGCACTTGCTGTATACTCTGATGTCAAAAAATCTGAATACAAGGAAGATGGACTTCCTGTAGACGTTAAATTACCCGTTAAGCATGTACTATCAAAGGAACTTCAGCTTTACTTTGAGAAGATTACAGGGCTTACTCAAAGGTCTAGCTCAACCCTTTTCAAAGAAGCATTAATGAGTTTGGCAACAGATTCAGGACTCCATCCGTTGGTCCCTTACTTTACGTGTTTCGTTGCTGATGAGGTTACACGGAATTTGAATAATTTTCTCTACCTATTTGCTTTGATGCGTCTTGTCCGGAGCCTTCTTCAAAATCCTCACATACATGTTGAACCTTATCTACACCAATTGATGCCTTCTGTTATTACCTGCCTTGTTGCAAAAAGACTAGGGAATAGATATACTGACAATCACTGGGAACTTAGAAACTTTACTGCCAACCTGGTTTCTTCAATTTGCAAAAGATTTGGACATGTTTATCATAATCTTCAGCCACGGTTGACAAGGACTTTGCTTCATGCTTTCTTGGACCCAAACAAAGCATTACCCCAACATTATGGCGCAATTCAAGGGCTAGCAGCTCTTGGTCCCAATGTGGTTCGTTTACTTATACTGCCAAATCTTGATTCATATATGCAACTTCTTGAGCCAGAAATGATACTTGAGAAGCAAAAGAATGAGATAAAGAGGCATGAAGCTTGGCGCGTCTATGGGGCCTTGCTGCGTGCGGCTGGCCAATGCATGCATGACCGGCTCAAGAAGTTCCACAGTCTGCTCTCTCCAGCTCATCTTGTTTGGAAGAGGAATGGAAAGATTGCAACAACAATGACAAATAAACGCAAAGCAAGCACCGACAACTTGATGCTGCAACCACCACTCAAAAAATTAGCTCATGATGGCATGGTTGGAGCATTACCAATGAACTCCATGCAAGTTGACATGCAAGGGGCTGCAGGCGGATTTACCGCATCTGCTGGGAGCTTGAATGTTGGCGTTTCATCGATGTCCCACCAGTTACCAATGGAACAAATGTCAGGAAGGGATGTCAGTGGCCAAATGGTAAAGGGGTCTACTGGTCTTGCTCAGGCATGGAAAGAAGAGACCGATGTTGGACATGTGGTTGCATCATTGTTTGAACATTTTGGTGAAAGTGTATTTCCCTTTACTCCCAAATCAGAGTTATCTTTTTTCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000124 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044798 GO:0046483 GO:0051276 GO:0055029 GO:0061695 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TAF TAF6_C

Protein Analysis

539

Amino Acids

60.13

Weight (kDa)

8.4

Isoelectric Point (pI)

45.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAF	PF02969	1 - 66	1.4e-29	TATA box binding protein associated factor (TAF)
TAF6_C	PF07571	167 - 348	1.8e-75	TAF6 C-terminal HEAT repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04950 AT1G04950 AT1G04950
fragaria_vesca	FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670
malus_domestica	MD03G1192300.v1.1 MD09G1117900.v1.1 MD11G1208800.v1.1 MD17G1109200.v1.1
prunus_persica	Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.4G224900_v2.0.a1 Prupe.4G224900_v2.0.a1
pyrus_communis	pycom03g14470 pycom09g04320 pycom17g10170
rosa_chinensis	RchiOBHm_Chr2g0157381 RchiOBHm_Chr5g0041701 RchiOBHm_Chr5g0042101 RchiOBHm_Chr5g0042151 RchiOBHm_Chr5g0042161
rosa_laevigata	RLG00000020985 RLG00000034090
rosa_multiflora	Rmu_co8147136.1_g000001 Rmu_co8499353.1_g000001 Rmu_sc0000126.1_g000005 Rmu_sc0000126.1_g000020 Rmu_sc0000195.1_g000015 Rmu_sc0000861.1_g000026 Rmu_sc0001715.1_g000039 Rmu_sc0005255.1_g000023
rosa_roxburghii	Rroxscaffold_1G00038570 Rroxscaffold_1G00038810 Rroxscaffold_2G00092240
rosa_rugosa	Rorug02G0460600 Rorug02G0460700 Rorug02G0460800 Rorug05G0194900 Rorug05G0195000
rosa_samantha	Rh2AG525200 Rh2BG539300 Rh2CG509900 Rh2DG548400 Rh5AG280000 Rh5BG285500 Rh5BG288600 Rh5BG288900 Rh5CG317700 Rh5CG320200 Rh5DG294300 Rh5DG297700 Rh5DG298100 Rh5DG298200
rosa_wichuraiana	Rw0G001450 Rw2G043470 Rw5G026380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	403, 797
AccB1I	GGYRCC	1 cut(s)	325
AccB7I	CCANNNNNTGG	2 cut(s)	221, 628
AccI	GTMKAC	3 cut(s)	435, 483, 1490
AccII	CGCG	4 cut(s)	108, 114, 154, 1125
AccIII	TCCGGA	1 cut(s)	717
AciI	CCGC	4 cut(s)	106, 1148, 1377, 1386
AclWI	GGATC	1 cut(s)	233
AcoI	YGGCCR	2 cut(s)	1153, 1471
AcsI	RAATTY	2 cut(s)	305, 673
AcuI	CTGAAG	2 cut(s)	509, 893
AfaI	GTAC	2 cut(s)	104, 510
AfiI	CCNNNNNNNGG	2 cut(s)	221, 628
AflIII	ACRYGT	4 cut(s)	644, 745, 892, 1534
AjnI	CCWGG	1 cut(s)	861
AjuI	GAANNNNNNNTTGG	2 cut(s)	1030, 1062
AluBI	AGCT	8 cut(s)	260, 529, 570, 1001, 1118, 1205, 1310, 1401
AluI	AGCT	8 cut(s)	260, 529, 570, 1001, 1118, 1205, 1310, 1401
Alw26I	GTCTC	2 cut(s)	69, 1514
AlwI	GGATC	1 cut(s)	233
AlwNI	CAGNNNCTG	1 cut(s)	362
Aor13HI	TCCGGA	1 cut(s)	717
AoxI	GGCC	4 cut(s)	129, 1134, 1153, 1471
ApeKI	GCWGC	6 cut(s)	260, 362, 998, 1141, 1285, 1370
ApoI	RAATTY	2 cut(s)	305, 673
ArsI	GACNNNNNNTTYG	2 cut(s)	913, 945
AseI	ATTAAT	1 cut(s)	593
Asp700I	GAANNNNTTC	1 cut(s)	387
AspLEI	GCGC	3 cut(s)	191, 983, 1125
AspS9I	GGNCC	4 cut(s)	631, 949, 1007, 1134
AsuHPI	GGTGA	2 cut(s)	79, 1577
AsuNHI	GCTAGC	1 cut(s)	994
AvaII	GGWCC	3 cut(s)	631, 949, 1007
BalI	TGGCCA	2 cut(s)	1155, 1473
BanI	GGYRCC	1 cut(s)	325
BbvI	GCAGC	6 cut(s)	247, 349, 1010, 1128, 1272, 1357
BccI	CCATC	5 cut(s)	140, 179, 464, 630, 1310
BciT130I	CCWGG	1 cut(s)	863
BcoDI	GTCTC	2 cut(s)	69, 1514
BfaI	CTAG	3 cut(s)	567, 809, 995
BfmI	CTRYAG	2 cut(s)	480, 1371
BfuAI	ACCTGC	2 cut(s)	403, 797
BisI	GCNGC	7 cut(s)	261, 363, 999, 1142, 1149, 1286, 1371
BlsI	GCNGC	7 cut(s)	262, 364, 1000, 1143, 1150, 1287, 1372
Bme1390I	CCNGG	1 cut(s)	863
Bme18I	GGWCC	3 cut(s)	631, 949, 1007
BmgT120I	GGNCC	4 cut(s)	631, 949, 1007, 1134
BmiI	GGNNCC	7 cut(s)	213, 327, 633, 722, 951, 1009, 1135
BmrFI	CCNGG	1 cut(s)	863
BmrI	ACTGGG	1 cut(s)	844
BmsI	GCATC	5 cut(s)	696, 762, 1272, 1397, 1553
BmtI	GCTAGC	1 cut(s)	998
BmuI	ACTGGG	1 cut(s)	844
BpmI	CTGGAG	3 cut(s)	255, 399, 1185
Bpu10I	CCTNAGC	1 cut(s)	1503
BpuEI	CTTGAG	3 cut(s)	1085, 1103, 1160
Bsa29I	ATCGAT	1 cut(s)	1421
BsaAI	YACGTR	1 cut(s)	645
BsaI	GGTCTC	1 cut(s)	1514
BsaJI	CCNNGG	1 cut(s)	914
BsaWI	WCCGGW	1 cut(s)	717
Bsc4I	CCNNNNNNNGG	2 cut(s)	221, 628
Bse118I	RCCGGY	1 cut(s)	1170
Bse1I	ACTGG	5 cut(s)	374, 416, 839, 1432, 1498
BseAI	TCCGGA	1 cut(s)	717
BseBI	CCWGG	1 cut(s)	863
BseCI	ATCGAT	1 cut(s)	1421
BseDI	CCNNGG	1 cut(s)	914
BseGI	GGATG	4 cut(s)	190, 304, 622, 1468
BseLI	CCNNNNNNNGG	2 cut(s)	221, 628
BseMII	CTCAG	1 cut(s)	1517
BseNI	ACTGG	5 cut(s)	374, 416, 839, 1432, 1498
BseXI	GCAGC	6 cut(s)	247, 349, 1010, 1128, 1272, 1357
BseYI	CCCAGC	1 cut(s)	1394
Bsh1236I	CGCG	4 cut(s)	108, 114, 154, 1125
BshFI	GGCC	4 cut(s)	131, 1136, 1155, 1473
BshNI	GGYRCC	1 cut(s)	325
BshVI	ATCGAT	1 cut(s)	1421
BsiSI	CCGG	2 cut(s)	718, 1171
BslFI	GGGAC	3 cut(s)	617, 993, 1411
BslI	CCNNNNNNNGG	2 cut(s)	221, 628
BsmAI	GTCTC	2 cut(s)	69, 1514
BsmFI	GGGAC	3 cut(s)	617, 993, 1411
BsnI	GGCC	4 cut(s)	131, 1136, 1155, 1473
Bso31I	GGTCTC	1 cut(s)	1514
Bsp13I	TCCGGA	1 cut(s)	717
Bsp143I	GATC	2 cut(s)	117, 238
Bsp68I	TCGCGA	2 cut(s)	114, 154
BspACI	CCGC	4 cut(s)	106, 1148, 1377, 1386
BspANI	GGCC	4 cut(s)	131, 1136, 1155, 1473
BspCNI	CTCAG	1 cut(s)	1516
BspDI	ATCGAT	1 cut(s)	1421
BspEI	TCCGGA	1 cut(s)	717
BspFNI	CGCG	4 cut(s)	108, 114, 154, 1125
BspHI	TCATGA	1 cut(s)	1312
BspLI	GGNNCC	7 cut(s)	213, 327, 633, 722, 951, 1009, 1135
BspMAI	CTGCAG	1 cut(s)	1375
BspMI	ACCTGC	2 cut(s)	403, 797
BspOI	GCTAGC	1 cut(s)	998
BspPI	GGATC	1 cut(s)	233
BspT107I	GGYRCC	1 cut(s)	325
BspTNI	GGTCTC	1 cut(s)	1514
BsrFI	RCCGGY	1 cut(s)	1170
BsrI	ACTGG	5 cut(s)	374, 416, 839, 1432, 1498
BssAI	RCCGGY	1 cut(s)	1170
BssECI	CCNNGG	1 cut(s)	914
BssMI	GATC	2 cut(s)	117, 238
BssNAI	GTATAC	1 cut(s)	436
Bst1107I	GTATAC	1 cut(s)	436
Bst2UI	CCWGG	1 cut(s)	863
Bst4CI	ACNGT	2 cut(s)	918, 1190
Bst6I	CTCTTC	2 cut(s)	1214, 1512
BstBAI	YACGTR	1 cut(s)	645
BstC8I	GCNNGC	7 cut(s)	375, 996, 1146, 1153, 1163, 1267, 1375
BstDEI	CTNAG	2 cut(s)	842, 1503
BstDSI	CCRYGG	1 cut(s)	914
BstF5I	GGATG	4 cut(s)	190, 304, 622, 1468
BstFNI	CGCG	4 cut(s)	108, 114, 154, 1125
BstHHI	GCGC	3 cut(s)	191, 983, 1125
BstKTI	GATC	2 cut(s)	120, 241
BstMAI	GTCTC	2 cut(s)	69, 1514
BstMBI	GATC	2 cut(s)	117, 238
BstMWI	GCNNNNNNNGC	2 cut(s)	1171, 1266
BstNI	CCWGG	1 cut(s)	863
BstNSI	RCATGY	6 cut(s)	509, 749, 896, 1165, 1363, 1538
BstSCI	CCNGG	1 cut(s)	861
BstSFI	CTRYAG	2 cut(s)	480, 1371
BstUI	CGCG	4 cut(s)	108, 114, 154, 1125
BstV1I	GCAGC	6 cut(s)	247, 349, 1010, 1128, 1272, 1357
BstX2I	RGATCY	1 cut(s)	238
BstXI	CCANNNNNNTGG	1 cut(s)	977
BstYI	RGATCY	1 cut(s)	238
BstZ17I	GTATAC	1 cut(s)	436
Bsu15I	ATCGAT	1 cut(s)	1421
BsuRI	GGCC	4 cut(s)	131, 1136, 1155, 1473
BsuTUI	ATCGAT	1 cut(s)	1421
BtgI	CCRYGG	1 cut(s)	914
BtsCI	GGATG	4 cut(s)	190, 304, 622, 1468
BtsIMutI	CAGTG	3 cut(s)	367, 832, 1474
BtuMI	TCGCGA	2 cut(s)	114, 154
BveI	ACCTGC	2 cut(s)	403, 797
Cac8I	GCNNGC	7 cut(s)	375, 996, 1146, 1153, 1163, 1267, 1375
CaiI	CAGNNNCTG	1 cut(s)	362
CciI	TCATGA	1 cut(s)	1312
CfoI	GCGC	3 cut(s)	191, 983, 1125
Cfr10I	RCCGGY	1 cut(s)	1170
Cfr13I	GGNCC	4 cut(s)	631, 949, 1007, 1134
ClaI	ATCGAT	1 cut(s)	1421
CseI	GACGC	2 cut(s)	698, 1114
CsiI	ACCWGGT	1 cut(s)	861
Csp6I	GTAC	2 cut(s)	103, 509
CviQI	GTAC	2 cut(s)	103, 509
DdeI	CTNAG	2 cut(s)	842, 1503
DpnI	GATC	2 cut(s)	119, 240
DpnII	GATC	2 cut(s)	117, 238
EaeI	YGGCCR	2 cut(s)	1153, 1471
Eam1104I	CTCTTC	2 cut(s)	1214, 1512
EarI	CTCTTC	2 cut(s)	1214, 1512
EciI	GGCGGA	1 cut(s)	1392
Eco31I	GGTCTC	1 cut(s)	1514
Eco47I	GGWCC	3 cut(s)	631, 949, 1007
Eco57I	CTGAAG	2 cut(s)	509, 893
EcoO109I	RGGNCCY	1 cut(s)	1134
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	1 cut(s)	861
EcoT22I	ATGCAT	2 cut(s)	1163, 1167
FalI	AAGNNNNNCTT	2 cut(s)	459, 491
FaqI	GGGAC	3 cut(s)	617, 993, 1411
FblI	GTMKAC	3 cut(s)	435, 483, 1490
Fnu4HI	GCNGC	7 cut(s)	261, 363, 999, 1142, 1149, 1286, 1371
FokI	GGATG	4 cut(s)	197, 311, 609, 1475
Fsp4HI	GCNGC	7 cut(s)	261, 363, 999, 1142, 1149, 1286, 1371
FspBI	CTAG	3 cut(s)	567, 809, 995
GlaI	GCGC	3 cut(s)	190, 982, 1124
GluI	GCNGC	7 cut(s)	261, 363, 999, 1142, 1149, 1286, 1371
GsaI	CCCAGC	1 cut(s)	1398
GsuI	CTGGAG	3 cut(s)	255, 399, 1185
HaeIII	GGCC	4 cut(s)	131, 1136, 1155, 1473
HapII	CCGG	2 cut(s)	718, 1171
HgaI	GACGC	2 cut(s)	698, 1114
HhaI	GCGC	3 cut(s)	191, 983, 1125
Hin6I	GCGC	3 cut(s)	189, 981, 1123
HinP1I	GCGC	3 cut(s)	189, 981, 1123
HincII	GTYRAC	2 cut(s)	921, 1357
HindII	GTYRAC	2 cut(s)	921, 1357
HindIII	AAGCTT	1 cut(s)	1116
HinfI	GANTC	3 cut(s)	611, 618, 1046
HpaII	CCGG	2 cut(s)	718, 1171
HphI	GGTGA	2 cut(s)	79, 1577
Hpy166II	GTNNAC	6 cut(s)	436, 484, 921, 1025, 1357, 1491
Hpy188I	TCNGA	3 cut(s)	442, 457, 1597
Hpy8I	GTNNAC	6 cut(s)	436, 484, 921, 1025, 1357, 1491
Hpy99I	CGWCG	1 cut(s)	159
HpyAV	CCTTC	4 cut(s)	377, 734, 786, 1452
HpyCH4III	ACNGT	2 cut(s)	918, 1190
HpyCH4IV	ACGT	3 cut(s)	9, 486, 644
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1171, 1266
HpyF3I	CTNAG	2 cut(s)	842, 1503
HpySE526I	ACGT	3 cut(s)	9, 486, 644
HspAI	GCGC	3 cut(s)	189, 981, 1123
Kpn2I	TCCGGA	1 cut(s)	717
Kzo9I	GATC	2 cut(s)	117, 238
LmnI	GCTCC	5 cut(s)	211, 418, 720, 1328, 1398
Lsp1109I	GCAGC	6 cut(s)	247, 349, 1010, 1128, 1272, 1357
LweI	GCATC	5 cut(s)	696, 762, 1272, 1397, 1553
MabI	ACCWGGT	1 cut(s)	861
MaeI	CTAG	3 cut(s)	567, 809, 995
MaeII	ACGT	3 cut(s)	9, 486, 644
MaeIII	GTNAC	2 cut(s)	664, 1434
MalI	GATC	2 cut(s)	119, 240
MboI	GATC	2 cut(s)	117, 238
MboII	GAAGA	7 cut(s)	479, 553, 719, 861, 899, 1231, 1529
MfeI	CAATTG	1 cut(s)	767
MflI	RGATCY	1 cut(s)	238
MlsI	TGGCCA	2 cut(s)	1155, 1473
MluNI	TGGCCA	2 cut(s)	1155, 1473
MlyI	GAGTC	1 cut(s)	612
MmeI	TCCRAC	2 cut(s)	1306, 1510
MnlI	CCTC	9 cut(s)	22, 121, 138, 240, 316, 655, 747, 1101, 1215
Mox20I	TGGCCA	2 cut(s)	1155, 1473
Mph1103I	ATGCAT	2 cut(s)	1163, 1167
MroI	TCCGGA	1 cut(s)	717
MroXI	GAANNNNTTC	1 cut(s)	387
MscI	TGGCCA	2 cut(s)	1155, 1473
MseI	TTAA	4 cut(s)	195, 489, 501, 593
MslI	CAYNNNNRTG	2 cut(s)	744, 1563
Msp20I	TGGCCA	2 cut(s)	1155, 1473
MspI	CCGG	2 cut(s)	718, 1171
MspR9I	CCNGG	1 cut(s)	863
MunI	CAATTG	1 cut(s)	767
MvaI	CCWGG	1 cut(s)	863
MvnI	CGCG	4 cut(s)	108, 114, 154, 1125
MwoI	GCNNNNNNNGC	2 cut(s)	1171, 1266
NdeII	GATC	2 cut(s)	117, 238
NheI	GCTAGC	1 cut(s)	994
NlaIV	GGNNCC	7 cut(s)	213, 327, 633, 722, 951, 1009, 1135
NruI	TCGCGA	2 cut(s)	114, 154
NsiI	ATGCAT	2 cut(s)	1163, 1167
NspI	RCATGY	6 cut(s)	509, 749, 896, 1165, 1363, 1538
PaeI	GCATGC	1 cut(s)	1165
PagI	TCATGA	1 cut(s)	1312
PciI	ACATGT	3 cut(s)	745, 892, 1534
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	387
PfeI	GAWTC	2 cut(s)	611, 1046
PflMI	CCANNNNNTGG	2 cut(s)	221, 628
PkrI	GCNGC	7 cut(s)	262, 364, 1000, 1143, 1150, 1287, 1372
PleI	GAGTC	1 cut(s)	612
PpsI	GAGTC	1 cut(s)	612
Ppu21I	YACGTR	1 cut(s)	645
PscI	ACATGT	3 cut(s)	745, 892, 1534
PshBI	ATTAAT	1 cut(s)	593
Psp6I	CCWGG	1 cut(s)	861
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	1 cut(s)	861
PspN4I	GGNNCC	7 cut(s)	213, 327, 633, 722, 951, 1009, 1135
PspPI	GGNCC	4 cut(s)	631, 949, 1007, 1134
PsrI	GAACNNNNNNTAC	2 cut(s)	744, 776
PstI	CTGCAG	1 cut(s)	1375
PstNI	CAGNNNCTG	1 cut(s)	362
PsuI	RGATCY	1 cut(s)	238
RruI	TCGCGA	2 cut(s)	114, 154
RsaI	GTAC	2 cut(s)	104, 510
RsaNI	GTAC	2 cut(s)	103, 509
RseI	CAYNNNNRTG	2 cut(s)	744, 1563
SaqAI	TTAA	4 cut(s)	195, 489, 501, 593
SatI	GCNGC	7 cut(s)	261, 363, 999, 1142, 1149, 1286, 1371
Sau3AI	GATC	2 cut(s)	117, 238
Sau96I	GGNCC	4 cut(s)	631, 949, 1007, 1134
SchI	GAGTC	1 cut(s)	612
ScrFI	CCNGG	1 cut(s)	863
SexAI	ACCWGGT	1 cut(s)	861
SfaNI	GCATC	5 cut(s)	696, 762, 1272, 1397, 1553
SfcI	CTRYAG	2 cut(s)	480, 1371
SinI	GGWCC	3 cut(s)	631, 949, 1007
SmiMI	CAYNNNNRTG	2 cut(s)	744, 1563
SmlI	CTYRAG	3 cut(s)	1064, 1082, 1175
SmoI	CTYRAG	3 cut(s)	1064, 1082, 1175
SphI	GCATGC	1 cut(s)	1165
SsiI	CCGC	4 cut(s)	106, 1148, 1377, 1386
SspMI	CTAG	3 cut(s)	567, 809, 995
StyD4I	CCNGG	1 cut(s)	861
TaaI	ACNGT	2 cut(s)	918, 1190
TaiI	ACGT	3 cut(s)	12, 489, 647
TaqI	TCGA	3 cut(s)	99, 381, 1421
TaqII	GACCGA	1 cut(s)	1538
TatI	WGTACW	1 cut(s)	508
TauI	GCSGC	1 cut(s)	1151
TfiI	GAWTC	2 cut(s)	611, 1046
Tru1I	TTAA	4 cut(s)	195, 489, 501, 593
Tru9I	TTAA	4 cut(s)	195, 489, 501, 593
TscAI	CASTG	3 cut(s)	374, 839, 1474
TseI	GCWGC	6 cut(s)	260, 362, 998, 1141, 1285, 1370
TspDTI	ATGAA	5 cut(s)	926, 1038, 1128, 1355, 1407
TspGWI	ACGGA	3 cut(s)	172, 615, 685
TspRI	CASTG	3 cut(s)	374, 839, 1474
Van91I	CCANNNNNTGG	2 cut(s)	221, 628
VpaK11BI	GGWCC	3 cut(s)	631, 949, 1007
VspI	ATTAAT	1 cut(s)	593
XapI	RAATTY	2 cut(s)	305, 673
XceI	RCATGY	6 cut(s)	509, 749, 896, 1165, 1363, 1538
XmiI	GTMKAC	3 cut(s)	435, 483, 1490
XmnI	GAANNNNTTC	1 cut(s)	387
XspI	CTAG	3 cut(s)	567, 809, 995
Zsp2I	ATGCAT	2 cut(s)	1163, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.