MD17G1109200.v1.1

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000796
Physical Location & Seq
Forward (+)
9351188 .. 9364541
13354 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1109200.v1.1.491

Sequence Viewer

Length: 1635 bp
ATGAGCATTGTGCCCAAAGAGAATGTTGAAGTAATTGCACAAAGCATTGGAATCAGCAACTTGTCTCCAGATGTTGCTCTTGCTCTCGTCCCCGATATCGAATACCGCCTCCGTGAGATCATGCAGGAGGCTATTAAATGCATGCATCACTCGAGGAGAACTAGATTGACAGCCGAAGATGTTGATGGTGCACTCAACTTAAGAAATGTTGAGCCAATCTATGGTTATGTTTCTGGAGGTCCTTTGCGGTTCAAAAGAGCTATTGGGCATAGGGATTTGTTTTACATTGACGACAAGGATGTGGATTTTAAAGATGTGATTGAAGCTCCTTTACCAAAAGCACCGCTTGATACTGGAATTGTTTGTCACTGGCTTGCTATAGAAGGTGTACAACCTGCAATTCCAGAGAATGCTCCTCTAGAAGTACTTGCACCTCCTTCTGATGGTAAAATTTATAACCAAAAGGATGATGGACTTCCCGTTGACATTAAATTACCTGTTAAGCACATCTTATCTAGGGAGCTTCAGCTATATTTTGACAAAATCACCGAGCTTGTTGTGAGTAGATCTGATTTGGTTTTGTTCAAAGAAGCATTAGTGAGTTTGGCCACTGATTCGGGACTTCATCCATTAGTTCCTTATTTCACATGCTTTATCGCTGATGAGGTTTCTCGTGGCTTGAATGATTATGCACTTCTATTCGCTTTAATGCGAGTTGTTCGGAGTCTTCTCCAAAATCCTCACATACACATAGAACCTTATCTGCACCAATTGATGCCATCTGTGGTCACTTGCCTTGTTGCGAAAAGGTTAGGCAACAGGTTTGCTGACAATCATTGGGAACTTAGAGACTTCACTGCAAACCTAGTTGCTTCAATCTGCAAAAGGTTTGGGCATGTATATAACACTCTCCAGTCGCGTCTTACAAAAACTTTGGTCAATGCATTTTTGGACCCAAAGCGGACATTGACTCAACACTATGGTGCAATTCAAGGTTTAGCTGCTCTAGGGCCCAGTGTGGTTCGCCTTCTTGTACTGCCAAATCTGGAGTCATATCTGCGACTACTTGAACCAGAGCTGCTTCTTGACAAGCAAAAGAATGAGATGAAGAGGCATGAAGCGTGGCGTGTGTATGGAGCCTTGTTGAATGCAGCAGGTCAATGCATATATGATAGGCTCAAGATGTTCCCACTTATGTCGTCTCCAACGCCGCAATCTTTTTGGAGGGCCCATGGAAAACTTCGTATTACTCTGCCAAATAAACGCAAGCGAAGTGTGGAACACATGGAAGAGCAACCGCCCCTGCAGAAAATTGCAACTGATGGGCCAACAGATATAGCGATAACTAATTCTTCACCATCTCACATGGAAGTAGACACAGCAGCTCCAGCTCCATCAGGGGATACTGATGCAGGCCCCTCGTCGTCTTCTCAGAAAATGCCGGATGAGAGCATTTCACACGGCACAAGTTCAAGGGGCAAGCCTGCTGGTCAGTCTCTAAAGAAATCAGCTATCCTCACTCAGGTTTGGAAGGATGACTTGAATTCTGGGCATCTCCTAGTGTCGTTGTTTGAGTTGTTCGGTGAAGACATTCTCTCTTTTGTTCCAGCCCCCGAGATGTGTTTGTTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000123 GO:0000124 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010467 GO:0016043 GO:0016049 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0022414 GO:0030154 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044706 GO:0044798 GO:0046483 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051276 GO:0051704 GO:0055029 GO:0060560 GO:0061695 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko03022 ko05168 map03022 map05168
Pfam Domains
Protein Families
TAF TAF6_C

Protein Analysis

545

Amino Acids

60.67

Weight (kDa)

6.42

Isoelectric Point (pI)

56.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF PF02969 1 - 65 2e-28 TATA box binding protein associated factor (TAF)
TAF6_C PF07571 167 - 350 4.9e-74 TAF6 C-terminal HEAT repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 456
Acc36I ACCTGC 2 cut(s) 403, 1145
AccB7I CCANNNNNTGG 1 cut(s) 221
AccI GTMKAC 1 cut(s) 1374
AccII CGCG 1 cut(s) 919
AciI CCGC 6 cut(s) 106, 247, 344, 961, 1211, 1298
AcoI YGGCCR 1 cut(s) 606
AcsI RAATTY 2 cut(s) 450, 1543
AcuI CTGAAG 1 cut(s) 509
AfaI GTAC 3 cut(s) 390, 426, 1035
AfiI CCNNNNNNNGG 3 cut(s) 221, 443, 1522
AflII CTTAAG 1 cut(s) 199
AleI CACNNNNGTG 1 cut(s) 981
Alw21I GWGCWC 1 cut(s) 193
Alw26I GTCTC 4 cut(s) 69, 843, 1206, 1500
Alw44I GTGCAC 1 cut(s) 189
Ama87I CYCGRG 2 cut(s) 151, 1613
AoxI GGCC 5 cut(s) 606, 1010, 1227, 1325, 1414
ApaI GGGCCC 2 cut(s) 1014, 1231
ApaLI GTGCAC 1 cut(s) 189
ApeKI GCWGC 4 cut(s) 1001, 1078, 1151, 1382
ApoI RAATTY 2 cut(s) 450, 1543
ArsI GACNNNNNNTTYG 2 cut(s) 1034, 1066
Asp700I GAANNNNTTC 1 cut(s) 1590
AspS9I GGNCC 8 cut(s) 239, 952, 1010, 1011, 1227, 1228, 1325, 1415
AsuHPI GGTGA 3 cut(s) 538, 1347, 1595
AvaI CYCGRG 2 cut(s) 151, 1613
AvaII GGWCC 2 cut(s) 239, 952
BaeGI GKGCMC 4 cut(s) 15, 193, 1014, 1231
BalI TGGCCA 1 cut(s) 608
BanII GRGCYC 2 cut(s) 1014, 1231
BarI GAAGNNNNNNTAC 2 cut(s) 315, 347
BauI CACGAG 1 cut(s) 672
BbsI GAAGAC 3 cut(s) 719, 1419, 1593
Bbv12I GWGCWC 1 cut(s) 193
BbvI GCAGC 4 cut(s) 988, 1065, 1163, 1394
BccI CCATC 7 cut(s) 179, 437, 464, 787, 1316, 1366, 1402
BceAI ACGGC 1 cut(s) 1477
BcgI CGANNNNNNTGC 2 cut(s) 1401, 1435
BciVI GTATCC 1 cut(s) 1396
BcoDI GTCTC 4 cut(s) 69, 843, 1206, 1500
BfaI CTAG 6 cut(s) 162, 419, 516, 866, 1007, 1559
BfmI CTRYAG 2 cut(s) 378, 1304
BfrI CTTAAG 1 cut(s) 199
BfuAI ACCTGC 2 cut(s) 403, 1145
BfuI GTATCC 1 cut(s) 1396
BglII AGATCT 1 cut(s) 566
BisI GCNGC 5 cut(s) 1002, 1079, 1152, 1211, 1383
BlsI GCNGC 5 cut(s) 1003, 1080, 1153, 1212, 1384
BmcAI AGTACT 1 cut(s) 426
Bme18I GGWCC 2 cut(s) 239, 952
BmeT110I CYCGRG 2 cut(s) 151, 1613
BmgT120I GGNCC 8 cut(s) 239, 952, 1010, 1011, 1227, 1228, 1325, 1415
BmiI GGNNCC 5 cut(s) 954, 1012, 1138, 1229, 1417
BmrI ACTGGG 1 cut(s) 1008
BmsI GCATC 4 cut(s) 154, 765, 1399, 1561
BmuI ACTGGG 1 cut(s) 1008
BpiI GAAGAC 3 cut(s) 719, 1419, 1593
BpmI CTGGAG 5 cut(s) 51, 255, 896, 1067, 1371
BpuEI CTTGAG 1 cut(s) 1163
BsaJI CCNNGG 1 cut(s) 1231
BsaXI ACNNNNNCTCC 2 cut(s) 1369, 1399
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 443, 1522
Bse1I ACTGG 4 cut(s) 358, 374, 913, 1014
BseDI CCNNGG 1 cut(s) 1231
BseGI GGATG 5 cut(s) 304, 472, 625, 1450, 1540
BseLI CCNNNNNNNGG 3 cut(s) 221, 443, 1522
BseMII CTCAG 2 cut(s) 1445, 1535
BseNI ACTGG 4 cut(s) 358, 374, 913, 1014
BseRI GAGGAG 2 cut(s) 169, 405
BseSI GKGCMC 4 cut(s) 15, 193, 1014, 1231
BseXI GCAGC 4 cut(s) 988, 1065, 1163, 1394
BsgI GTGCAG 1 cut(s) 749
Bsh1236I CGCG 1 cut(s) 919
BshFI GGCC 5 cut(s) 608, 1012, 1229, 1327, 1416
BsiHKAI GWGCWC 1 cut(s) 193
BsiHKCI CYCGRG 2 cut(s) 151, 1613
BsiSI CCGG 1 cut(s) 1442
BslFI GGGAC 2 cut(s) 74, 633
BslI CCNNNNNNNGG 3 cut(s) 221, 443, 1522
BsmAI GTCTC 4 cut(s) 69, 843, 1206, 1500
BsmBI CGTCTC 1 cut(s) 1206
BsmFI GGGAC 2 cut(s) 74, 633
BsmI GAATGC 2 cut(s) 415, 1153
BsnI GGCC 5 cut(s) 608, 1012, 1229, 1327, 1416
BsoBI CYCGRG 2 cut(s) 151, 1613
Bsp120I GGGCCC 2 cut(s) 1010, 1227
Bsp1286I GDGCHC 4 cut(s) 15, 193, 1014, 1231
Bsp1407I TGTACA 1 cut(s) 388
Bsp143I GATC 2 cut(s) 117, 566
Bsp19I CCATGG 1 cut(s) 1231
BspACI CCGC 6 cut(s) 106, 247, 344, 961, 1211, 1298
BspANI GGCC 5 cut(s) 608, 1012, 1229, 1327, 1416
BspCNI CTCAG 2 cut(s) 1444, 1534
BspFNI CGCG 1 cut(s) 919
BspLI GGNNCC 5 cut(s) 954, 1012, 1138, 1229, 1417
BspMAI CTGCAG 1 cut(s) 1308
BspMI ACCTGC 2 cut(s) 403, 1145
BspQI GCTCTTC 1 cut(s) 1284
BspTI CTTAAG 1 cut(s) 199
BsrGI TGTACA 1 cut(s) 388
BsrI ACTGG 4 cut(s) 358, 374, 913, 1014
BssECI CCNNGG 1 cut(s) 1231
BssMI GATC 2 cut(s) 117, 566
BssSI CACGAG 1 cut(s) 672
BssT1I CCWWGG 1 cut(s) 1231
Bst2BI CACGAG 1 cut(s) 672
Bst6I CTCTTC 2 cut(s) 1103, 1284
BstAFI CTTAAG 1 cut(s) 199
BstAUI TGTACA 1 cut(s) 388
BstC8I GCNNGC 6 cut(s) 143, 375, 1268, 1414, 1481, 1485
BstDEI CTNAG 3 cut(s) 845, 1431, 1521
BstDSI CCRYGG 1 cut(s) 1231
BstENI CCTNNNNNAGG 1 cut(s) 1520
BstF5I GGATG 5 cut(s) 304, 472, 625, 1450, 1540
BstFNI CGCG 1 cut(s) 919
BstKTI GATC 2 cut(s) 120, 569
BstMAI GTCTC 4 cut(s) 69, 843, 1206, 1500
BstMBI GATC 2 cut(s) 117, 566
BstMWI GCNNNNNNNGC 1 cut(s) 1388
BstNSI RCATGY 3 cut(s) 145, 651, 899
BstSFI CTRYAG 2 cut(s) 378, 1304
BstSLI GKGCMC 4 cut(s) 15, 193, 1014, 1231
BstUI CGCG 1 cut(s) 919
BstV1I GCAGC 4 cut(s) 988, 1065, 1163, 1394
BstV2I GAAGAC 3 cut(s) 719, 1419, 1593
BstX2I RGATCY 1 cut(s) 566
BstYI RGATCY 1 cut(s) 566
BsuI GTATCC 1 cut(s) 1396
BsuRI GGCC 5 cut(s) 608, 1012, 1229, 1327, 1416
BtgI CCRYGG 1 cut(s) 1231
BtsCI GGATG 5 cut(s) 304, 472, 625, 1450, 1540
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 4 cut(s) 367, 609, 855, 1021
BveI ACCTGC 2 cut(s) 403, 1145
Cac8I GCNNGC 6 cut(s) 143, 375, 1268, 1414, 1481, 1485
Cfr13I GGNCC 8 cut(s) 239, 952, 1010, 1011, 1227, 1228, 1325, 1415
CseI GACGC 1 cut(s) 908
Csp6I GTAC 3 cut(s) 389, 425, 1034
CviAII CATG 8 cut(s) 121, 142, 648, 896, 1115, 1232, 1285, 1366
CviQI GTAC 3 cut(s) 389, 425, 1034
DdeI CTNAG 3 cut(s) 845, 1431, 1521
DpnI GATC 2 cut(s) 119, 568
DpnII GATC 2 cut(s) 117, 566
DraI TTTAAA 1 cut(s) 310
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 2 cut(s) 1103, 1284
EarI CTCTTC 2 cut(s) 1103, 1284
Eco130I CCWWGG 1 cut(s) 1231
Eco24I GRGCYC 2 cut(s) 1014, 1231
Eco32I GATATC 1 cut(s) 97
Eco47I GGWCC 2 cut(s) 239, 952
Eco57I CTGAAG 1 cut(s) 509
Eco88I CYCGRG 2 cut(s) 151, 1613
EcoNI CCTNNNNNAGG 1 cut(s) 1520
EcoO109I RGGNCCY 4 cut(s) 239, 1010, 1227, 1415
EcoRI GAATTC 1 cut(s) 1543
EcoRV GATATC 1 cut(s) 97
EcoT14I CCWWGG 1 cut(s) 1231
EcoT22I ATGCAT 4 cut(s) 143, 147, 946, 1166
EcoT38I GRGCYC 2 cut(s) 1014, 1231
ErhI CCWWGG 1 cut(s) 1231
Esp3I CGTCTC 1 cut(s) 1206
FaeI CATG 8 cut(s) 124, 145, 651, 899, 1118, 1235, 1288, 1369
FalI AAGNNNNNCTT 6 cut(s) 330, 362, 494, 526, 1523, 1555
FaqI GGGAC 2 cut(s) 74, 633
FatI CATG 8 cut(s) 120, 141, 647, 895, 1114, 1231, 1284, 1365
FblI GTMKAC 1 cut(s) 1374
Fnu4HI GCNGC 5 cut(s) 1002, 1079, 1152, 1211, 1383
FokI GGATG 5 cut(s) 311, 479, 612, 1457, 1547
FriOI GRGCYC 2 cut(s) 1014, 1231
Fsp4HI GCNGC 5 cut(s) 1002, 1079, 1152, 1211, 1383
FspBI CTAG 6 cut(s) 162, 419, 516, 866, 1007, 1559
GluI GCNGC 5 cut(s) 1002, 1079, 1152, 1211, 1383
GsuI CTGGAG 5 cut(s) 51, 255, 896, 1067, 1371
HaeIII GGCC 5 cut(s) 608, 1012, 1229, 1327, 1416
HapII CCGG 1 cut(s) 1442
HgaI GACGC 1 cut(s) 908
Hin1II CATG 8 cut(s) 124, 145, 651, 899, 1118, 1235, 1288, 1369
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 5 cut(s) 51, 614, 724, 970, 1049
HpaII CCGG 1 cut(s) 1442
HphI GGTGA 3 cut(s) 538, 1347, 1595
Hpy166II GTNNAC 4 cut(s) 191, 389, 484, 1375
Hpy188I TCNGA 4 cut(s) 442, 571, 723, 1434
Hpy188III TCNNGA 8 cut(s) 68, 234, 404, 419, 618, 1046, 1085, 1180
Hpy8I GTNNAC 4 cut(s) 191, 389, 484, 1375
Hpy99I CGWCG 1 cut(s) 1426
HpyAV CCTTC 4 cut(s) 377, 447, 1037, 1525
HpyF10VI GCNNNNNNNGC 1 cut(s) 1388
HpyF3I CTNAG 3 cut(s) 845, 1431, 1521
Hsp92II CATG 8 cut(s) 124, 145, 651, 899, 1118, 1235, 1288, 1369
Kzo9I GATC 2 cut(s) 117, 566
LguI GCTCTTC 1 cut(s) 1284
LmnI GCTCC 6 cut(s) 331, 418, 520, 1136, 1390, 1396
Lsp1109I GCAGC 4 cut(s) 988, 1065, 1163, 1394
LweI GCATC 4 cut(s) 154, 765, 1399, 1561
MaeI CTAG 6 cut(s) 162, 419, 516, 866, 1007, 1559
MaeIII GTNAC 2 cut(s) 365, 787
MalI GATC 2 cut(s) 119, 568
MboI GATC 2 cut(s) 117, 566
MboII GAAGA 7 cut(s) 188, 719, 1120, 1301, 1344, 1419, 1598
MfeI CAATTG 1 cut(s) 770
MflI RGATCY 1 cut(s) 566
MhlI GDGCHC 4 cut(s) 15, 193, 1014, 1231
MlsI TGGCCA 1 cut(s) 608
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 3 cut(s) 733, 964, 1058
MmeI TCCRAC 1 cut(s) 1229
Mox20I TGGCCA 1 cut(s) 608
Mph1103I ATGCAT 4 cut(s) 143, 147, 946, 1166
MroXI GAANNNNTTC 1 cut(s) 1590
MscI TGGCCA 1 cut(s) 608
MseI TTAA 6 cut(s) 135, 200, 309, 489, 501, 707
MslI CAYNNNNRTG 1 cut(s) 981
Msp20I TGGCCA 1 cut(s) 608
MspCI CTTAAG 1 cut(s) 199
MspI CCGG 1 cut(s) 1442
MunI CAATTG 1 cut(s) 770
Mva1269I GAATGC 2 cut(s) 415, 1153
MvnI CGCG 1 cut(s) 919
MwoI GCNNNNNNNGC 1 cut(s) 1388
NcoI CCATGG 1 cut(s) 1231
NdeII GATC 2 cut(s) 117, 566
NlaIII CATG 8 cut(s) 124, 145, 651, 899, 1118, 1235, 1288, 1369
NlaIV GGNNCC 5 cut(s) 954, 1012, 1138, 1229, 1417
NmuCI GTSAC 2 cut(s) 365, 787
NsiI ATGCAT 4 cut(s) 143, 147, 946, 1166
NspI RCATGY 3 cut(s) 145, 651, 899
OliI CACNNNNGTG 1 cut(s) 981
PaeI GCATGC 1 cut(s) 145
PaeR7I CTCGAG 1 cut(s) 151
PciSI GCTCTTC 1 cut(s) 1284
PctI GAATGC 2 cut(s) 415, 1153
PdmI GAANNNNTTC 1 cut(s) 1590
PfeI GAWTC 2 cut(s) 51, 614
PflMI CCANNNNNTGG 1 cut(s) 221
PkrI GCNGC 5 cut(s) 1003, 1080, 1153, 1212, 1384
PleI GAGTC 3 cut(s) 732, 964, 1057
PpsI GAGTC 3 cut(s) 732, 964, 1057
PpuMI RGGWCCY 1 cut(s) 239
PsiI TTATAA 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 239
PspN4I GGNNCC 5 cut(s) 954, 1012, 1138, 1229, 1417
PspOMI GGGCCC 2 cut(s) 1010, 1227
PspPI GGNCC 8 cut(s) 239, 952, 1010, 1011, 1227, 1228, 1325, 1415
PspPPI RGGWCCY 1 cut(s) 239
PspXI VCTCGAGB 1 cut(s) 151
PstI CTGCAG 1 cut(s) 1308
PsuI RGATCY 1 cut(s) 566
RsaI GTAC 3 cut(s) 390, 426, 1035
RsaNI GTAC 3 cut(s) 389, 425, 1034
RseI CAYNNNNRTG 1 cut(s) 981
SapI GCTCTTC 1 cut(s) 1284
SaqAI TTAA 6 cut(s) 135, 200, 309, 489, 501, 707
SatI GCNGC 5 cut(s) 1002, 1079, 1152, 1211, 1383
Sau3AI GATC 2 cut(s) 117, 566
Sau96I GGNCC 8 cut(s) 239, 952, 1010, 1011, 1227, 1228, 1325, 1415
ScaI AGTACT 1 cut(s) 426
SchI GAGTC 3 cut(s) 733, 964, 1058
SduI GDGCHC 4 cut(s) 15, 193, 1014, 1231
SfaNI GCATC 4 cut(s) 154, 765, 1399, 1561
SfcI CTRYAG 2 cut(s) 378, 1304
Sfr274I CTCGAG 1 cut(s) 151
SinI GGWCC 2 cut(s) 239, 952
SlaI CTCGAG 1 cut(s) 151
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 3 cut(s) 151, 199, 1178
SmoI CTYRAG 3 cut(s) 151, 199, 1178
SphI GCATGC 1 cut(s) 145
SsiI CCGC 6 cut(s) 106, 247, 344, 961, 1211, 1298
SspMI CTAG 6 cut(s) 162, 419, 516, 866, 1007, 1559
StyI CCWWGG 1 cut(s) 1231
TaqI TCGA 2 cut(s) 99, 152
TatI WGTACW 3 cut(s) 388, 424, 1033
TauI GCSGC 1 cut(s) 1213
TfiI GAWTC 2 cut(s) 51, 614
Tru1I TTAA 6 cut(s) 135, 200, 309, 489, 501, 707
Tru9I TTAA 6 cut(s) 135, 200, 309, 489, 501, 707
TscAI CASTG 4 cut(s) 374, 616, 862, 1021
TseFI GTSAC 2 cut(s) 365, 787
TseI GCWGC 4 cut(s) 1001, 1078, 1151, 1382
Tsp45I GTSAC 2 cut(s) 365, 787
TspDTI ATGAA 3 cut(s) 614, 1121, 1131
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 4 cut(s) 374, 616, 862, 1021
Van91I CCANNNNNTGG 1 cut(s) 221
Vha464I CTTAAG 1 cut(s) 199
VneI GTGCAC 1 cut(s) 189
VpaK11BI GGWCC 2 cut(s) 239, 952
XagI CCTNNNNNAGG 1 cut(s) 1520
XapI RAATTY 2 cut(s) 450, 1543
XbaI TCTAGA 1 cut(s) 418
XceI RCATGY 3 cut(s) 145, 651, 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 467
XhoI CTCGAG 1 cut(s) 151
XmiI GTMKAC 1 cut(s) 1374
XmnI GAANNNNTTC 1 cut(s) 1590
XspI CTAG 6 cut(s) 162, 419, 516, 866, 1007, 1559
ZrmI AGTACT 1 cut(s) 426
Zsp2I ATGCAT 4 cut(s) 143, 147, 946, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.