Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 249 |
| Acc36I | ACCTGC | 1 cut(s) | 289 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 107 |
| AccIII | TCCGGA | 2 cut(s) | 289, 1573 |
| AciI | CCGC | 1 cut(s) | 1112 |
| AclI | AACGTT | 1 cut(s) | 1154 |
| AcsI | RAATTY | 1 cut(s) | 1504 |
| AcuI | CTGAAG | 3 cut(s) | 386, 1160, 1341 |
| AfaI | GTAC | 1 cut(s) | 1170 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 107, 320, 1483 |
| AgeI | ACCGGT | 1 cut(s) | 373 |
| AgsI | TTSAA | 8 cut(s) | 139, 196, 278, 632, 837, 953, 1419, 1504 |
| AleI | CACNNNNGTG | 1 cut(s) | 942 |
| Alw21I | GWGCWC | 2 cut(s) | 79, 1245 |
| Alw26I | GTCTC | 2 cut(s) | 804, 1461 |
| Alw44I | GTGCAC | 1 cut(s) | 75 |
| Ama87I | CYCGRG | 1 cut(s) | 37 |
| Aor13HI | TCCGGA | 2 cut(s) | 289, 1573 |
| AoxI | GGCC | 4 cut(s) | 124, 971, 1285, 1375 |
| ApaI | GGGCCC | 1 cut(s) | 975 |
| ApaLI | GTGCAC | 1 cut(s) | 75 |
| ApeKI | GCWGC | 3 cut(s) | 962, 1039, 1343 |
| ApoI | RAATTY | 1 cut(s) | 1504 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 995, 1027 |
| AsiGI | ACCGGT | 1 cut(s) | 373 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 273, 1145, 1551 |
| AspS9I | GGNCC | 7 cut(s) | 125, 444, 913, 971, 972, 1286, 1376 |
| AsuHPI | GGTGA | 3 cut(s) | 1308, 1373, 1556 |
| AsuNHI | GCTAGC | 1 cut(s) | 259 |
| AvaI | CYCGRG | 1 cut(s) | 37 |
| AvaII | GGWCC | 2 cut(s) | 444, 913 |
| BaeGI | GKGCMC | 2 cut(s) | 79, 975 |
| BanII | GRGCYC | 2 cut(s) | 975, 1245 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 201, 233 |
| BauI | CACGAG | 1 cut(s) | 549 |
| BbsI | GAAGAC | 2 cut(s) | 1193, 1554 |
| Bbv12I | GWGCWC | 2 cut(s) | 79, 1245 |
| BbvI | GCAGC | 3 cut(s) | 949, 1026, 1355 |
| BccI | CCATC | 8 cut(s) | 65, 314, 341, 748, 1168, 1277, 1327, 1433 |
| BceAI | ACGGC | 1 cut(s) | 834 |
| BcoDI | GTCTC | 2 cut(s) | 804, 1461 |
| BfaI | CTAG | 5 cut(s) | 260, 393, 668, 968, 1392 |
| BfmI | CTRYAG | 2 cut(s) | 303, 744 |
| BfuAI | ACCTGC | 1 cut(s) | 289 |
| BglII | AGATCT | 1 cut(s) | 1143 |
| BisI | GCNGC | 4 cut(s) | 963, 1040, 1113, 1344 |
| BlsI | GCNGC | 4 cut(s) | 964, 1041, 1114, 1345 |
| Bme18I | GGWCC | 2 cut(s) | 444, 913 |
| BmeT110I | CYCGRG | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 7 cut(s) | 125, 444, 913, 971, 972, 1286, 1376 |
| BmiI | GGNNCC | 6 cut(s) | 127, 915, 973, 1032, 1099, 1378 |
| BmrI | ACTGGG | 1 cut(s) | 969 |
| BmsI | GCATC | 3 cut(s) | 576, 726, 1438 |
| BmtI | GCTAGC | 1 cut(s) | 263 |
| BmuI | ACTGGG | 1 cut(s) | 969 |
| BpiI | GAAGAC | 2 cut(s) | 1193, 1554 |
| BpmI | CTGGAG | 5 cut(s) | 141, 593, 857, 1028, 1332 |
| BpuEI | CTTGAG | 1 cut(s) | 1067 |
| BsaWI | WCCGGW | 3 cut(s) | 289, 373, 1573 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1330, 1360 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 107, 320, 1483 |
| Bse118I | RCCGGY | 1 cut(s) | 373 |
| Bse1I | ACTGG | 6 cut(s) | 244, 260, 874, 975, 1297, 1524 |
| Bse3DI | GCAATG | 1 cut(s) | 1127 |
| BseAI | TCCGGA | 2 cut(s) | 289, 1573 |
| BseGI | GGATG | 3 cut(s) | 190, 349, 502 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 107, 320, 1483 |
| BseMI | GCAATG | 1 cut(s) | 1127 |
| BseMII | CTCAG | 3 cut(s) | 417, 686, 1466 |
| BseNI | ACTGG | 6 cut(s) | 244, 260, 874, 975, 1297, 1524 |
| BseRI | GAGGAG | 2 cut(s) | 55, 1466 |
| BseSI | GKGCMC | 2 cut(s) | 79, 975 |
| BseXI | GCAGC | 3 cut(s) | 949, 1026, 1355 |
| BsgI | GTGCAG | 1 cut(s) | 29 |
| BshFI | GGCC | 4 cut(s) | 126, 973, 1287, 1377 |
| BshTI | ACCGGT | 1 cut(s) | 373 |
| BsiHKAI | GWGCWC | 2 cut(s) | 79, 1245 |
| BsiHKCI | CYCGRG | 1 cut(s) | 37 |
| BsiSI | CCGG | 3 cut(s) | 290, 374, 1574 |
| BslFI | GGGAC | 1 cut(s) | 510 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 107, 320, 1483 |
| BsmAI | GTCTC | 2 cut(s) | 804, 1461 |
| BsmFI | GGGAC | 1 cut(s) | 510 |
| BsmI | GAATGC | 1 cut(s) | 619 |
| BsnI | GGCC | 4 cut(s) | 126, 973, 1287, 1377 |
| BsoBI | CYCGRG | 1 cut(s) | 37 |
| Bsp120I | GGGCCC | 1 cut(s) | 971 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 975, 1245 |
| Bsp13I | TCCGGA | 2 cut(s) | 289, 1573 |
| Bsp143I | GATC | 2 cut(s) | 204, 1143 |
| BspACI | CCGC | 1 cut(s) | 1112 |
| BspANI | GGCC | 4 cut(s) | 126, 973, 1287, 1377 |
| BspCNI | CTCAG | 3 cut(s) | 418, 687, 1465 |
| BspEI | TCCGGA | 2 cut(s) | 289, 1573 |
| BspLI | GGNNCC | 6 cut(s) | 127, 915, 973, 1032, 1099, 1378 |
| BspMI | ACCTGC | 1 cut(s) | 289 |
| BspOI | GCTAGC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 1 cut(s) | 1127 |
| BsrFI | RCCGGY | 1 cut(s) | 373 |
| BsrI | ACTGG | 6 cut(s) | 244, 260, 874, 975, 1297, 1524 |
| BssAI | RCCGGY | 1 cut(s) | 373 |
| BssMI | GATC | 2 cut(s) | 204, 1143 |
| BssSI | CACGAG | 1 cut(s) | 549 |
| Bst2BI | CACGAG | 1 cut(s) | 549 |
| Bst4CI | ACNGT | 1 cut(s) | 944 |
| Bst6I | CTCTTC | 1 cut(s) | 1223 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstDEI | CTNAG | 4 cut(s) | 426, 695, 806, 1452 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1481 |
| BstF5I | GGATG | 3 cut(s) | 190, 349, 502 |
| BstKTI | GATC | 2 cut(s) | 207, 1146 |
| BstMAI | GTCTC | 2 cut(s) | 804, 1461 |
| BstMBI | GATC | 2 cut(s) | 204, 1143 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1349 |
| BstNSI | RCATGY | 3 cut(s) | 386, 528, 860 |
| BstSFI | CTRYAG | 2 cut(s) | 303, 744 |
| BstSLI | GKGCMC | 2 cut(s) | 79, 975 |
| BstV1I | GCAGC | 3 cut(s) | 949, 1026, 1355 |
| BstV2I | GAAGAC | 2 cut(s) | 1193, 1554 |
| BstX2I | RGATCY | 1 cut(s) | 1143 |
| BstYI | RGATCY | 1 cut(s) | 1143 |
| BsuRI | GGCC | 4 cut(s) | 126, 973, 1287, 1377 |
| BtsCI | GGATG | 3 cut(s) | 190, 349, 502 |
| BtsIMutI | CAGTG | 3 cut(s) | 253, 423, 982 |
| BveI | ACCTGC | 1 cut(s) | 289 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| Cfr10I | RCCGGY | 1 cut(s) | 373 |
| Cfr13I | GGNCC | 7 cut(s) | 125, 444, 913, 971, 972, 1286, 1376 |
| CseI | GACGC | 1 cut(s) | 20 |
| Csp6I | GTAC | 1 cut(s) | 1169 |
| CspAI | ACCGGT | 1 cut(s) | 373 |
| CviAII | CATG | 6 cut(s) | 383, 525, 680, 857, 1076, 1246 |
| CviQI | GTAC | 1 cut(s) | 1169 |
| DdeI | CTNAG | 4 cut(s) | 426, 695, 806, 1452 |
| DpnI | GATC | 2 cut(s) | 206, 1145 |
| DpnII | GATC | 2 cut(s) | 204, 1143 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 249 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 249 |
| Eam1104I | CTCTTC | 1 cut(s) | 1223 |
| EarI | CTCTTC | 1 cut(s) | 1223 |
| Ecl136II | GAGCTC | 1 cut(s) | 1243 |
| Eco24I | GRGCYC | 2 cut(s) | 975, 1245 |
| Eco32I | GATATC | 1 cut(s) | 1366 |
| Eco47I | GGWCC | 2 cut(s) | 444, 913 |
| Eco53kI | GAGCTC | 1 cut(s) | 1243 |
| Eco57I | CTGAAG | 3 cut(s) | 386, 1160, 1341 |
| Eco88I | CYCGRG | 1 cut(s) | 37 |
| EcoICRI | GAGCTC | 1 cut(s) | 1243 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1481 |
| EcoO109I | RGGNCCY | 3 cut(s) | 125, 971, 1376 |
| EcoRI | GAATTC | 1 cut(s) | 1504 |
| EcoRV | GATATC | 1 cut(s) | 1366 |
| EcoT22I | ATGCAT | 2 cut(s) | 907, 1127 |
| EcoT38I | GRGCYC | 2 cut(s) | 975, 1245 |
| FaeI | CATG | 6 cut(s) | 386, 528, 683, 860, 1079, 1249 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 216, 248, 634, 666 |
| FaqI | GGGAC | 1 cut(s) | 510 |
| FatI | CATG | 6 cut(s) | 382, 524, 679, 856, 1075, 1245 |
| Fnu4HI | GCNGC | 4 cut(s) | 963, 1040, 1113, 1344 |
| FokI | GGATG | 3 cut(s) | 197, 356, 489 |
| FriOI | GRGCYC | 2 cut(s) | 975, 1245 |
| Fsp4HI | GCNGC | 4 cut(s) | 963, 1040, 1113, 1344 |
| FspBI | CTAG | 5 cut(s) | 260, 393, 668, 968, 1392 |
| GluI | GCNGC | 4 cut(s) | 963, 1040, 1113, 1344 |
| GsuI | CTGGAG | 5 cut(s) | 141, 593, 857, 1028, 1332 |
| HaeIII | GGCC | 4 cut(s) | 126, 973, 1287, 1377 |
| HapII | CCGG | 3 cut(s) | 290, 374, 1574 |
| HgaI | GACGC | 1 cut(s) | 20 |
| Hin1II | CATG | 6 cut(s) | 386, 528, 683, 860, 1079, 1249 |
| HindIII | AAGCTT | 1 cut(s) | 1080 |
| HinfI | GANTC | 3 cut(s) | 491, 931, 1010 |
| HpaII | CCGG | 3 cut(s) | 290, 374, 1574 |
| HphI | GGTGA | 3 cut(s) | 1308, 1373, 1556 |
| Hpy166II | GTNNAC | 4 cut(s) | 77, 674, 690, 1093 |
| Hpy188I | TCNGA | 5 cut(s) | 319, 448, 585, 696, 993 |
| Hpy8I | GTNNAC | 4 cut(s) | 77, 674, 690, 1093 |
| HpyAV | CCTTC | 7 cut(s) | 263, 324, 614, 693, 998, 1486, 1570 |
| HpyCH4III | ACNGT | 1 cut(s) | 944 |
| HpyCH4IV | ACGT | 1 cut(s) | 1154 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1349 |
| HpyF3I | CTNAG | 4 cut(s) | 426, 695, 806, 1452 |
| HpySE526I | ACGT | 1 cut(s) | 1154 |
| Hsp92II | CATG | 6 cut(s) | 386, 528, 683, 860, 1079, 1249 |
| Kpn2I | TCCGGA | 2 cut(s) | 289, 1573 |
| Kzo9I | GATC | 2 cut(s) | 204, 1143 |
| LmnI | GCTCC | 6 cut(s) | 217, 316, 1097, 1240, 1351, 1576 |
| Lsp1109I | GCAGC | 3 cut(s) | 949, 1026, 1355 |
| LweI | GCATC | 3 cut(s) | 576, 726, 1438 |
| MaeI | CTAG | 5 cut(s) | 260, 393, 668, 968, 1392 |
| MaeII | ACGT | 1 cut(s) | 1154 |
| MaeIII | GTNAC | 5 cut(s) | 32, 251, 748, 876, 1303 |
| MalI | GATC | 2 cut(s) | 206, 1145 |
| MboI | GATC | 2 cut(s) | 204, 1143 |
| MfeI | CAATTG | 1 cut(s) | 731 |
| MflI | RGATCY | 1 cut(s) | 1143 |
| MhlI | GDGCHC | 3 cut(s) | 79, 975, 1245 |
| MlyI | GAGTC | 2 cut(s) | 925, 1019 |
| MmeI | TCCRAC | 1 cut(s) | 130 |
| MnlI | CCTC | 8 cut(s) | 7, 33, 116, 535, 687, 1065, 1390, 1487 |
| Mph1103I | ATGCAT | 2 cut(s) | 907, 1127 |
| MroI | TCCGGA | 2 cut(s) | 289, 1573 |
| MroXI | GAANNNNTTC | 3 cut(s) | 273, 1145, 1551 |
| MseI | TTAA | 4 cut(s) | 86, 366, 378, 462 |
| MslI | CAYNNNNRTG | 1 cut(s) | 942 |
| MspA1I | CMGCKG | 1 cut(s) | 59 |
| MspI | CCGG | 3 cut(s) | 290, 374, 1574 |
| MunI | CAATTG | 1 cut(s) | 731 |
| Mva1269I | GAATGC | 1 cut(s) | 619 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1349 |
| NdeII | GATC | 2 cut(s) | 204, 1143 |
| NheI | GCTAGC | 1 cut(s) | 259 |
| NlaIII | CATG | 6 cut(s) | 386, 528, 683, 860, 1079, 1249 |
| NlaIV | GGNNCC | 6 cut(s) | 127, 915, 973, 1032, 1099, 1378 |
| NmuCI | GTSAC | 3 cut(s) | 32, 251, 876 |
| NsiI | ATGCAT | 2 cut(s) | 907, 1127 |
| NspI | RCATGY | 3 cut(s) | 386, 528, 860 |
| OliI | CACNNNNGTG | 1 cut(s) | 942 |
| PaeR7I | CTCGAG | 1 cut(s) | 37 |
| PctI | GAATGC | 1 cut(s) | 619 |
| PdmI | GAANNNNTTC | 3 cut(s) | 273, 1145, 1551 |
| PfeI | GAWTC | 1 cut(s) | 491 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 107 |
| PinAI | ACCGGT | 1 cut(s) | 373 |
| PkrI | GCNGC | 4 cut(s) | 964, 1041, 1114, 1345 |
| PleI | GAGTC | 2 cut(s) | 925, 1018 |
| PpsI | GAGTC | 2 cut(s) | 925, 1018 |
| Psp124BI | GAGCTC | 1 cut(s) | 1245 |
| Psp1406I | AACGTT | 1 cut(s) | 1154 |
| PspN4I | GGNNCC | 6 cut(s) | 127, 915, 973, 1032, 1099, 1378 |
| PspOMI | GGGCCC | 1 cut(s) | 971 |
| PspPI | GGNCC | 7 cut(s) | 125, 444, 913, 971, 972, 1286, 1376 |
| PspXI | VCTCGAGB | 1 cut(s) | 37 |
| PsuI | RGATCY | 1 cut(s) | 1143 |
| PvuII | CAGCTG | 1 cut(s) | 59 |
| RsaI | GTAC | 1 cut(s) | 1170 |
| RsaNI | GTAC | 1 cut(s) | 1169 |
| RseI | CAYNNNNRTG | 1 cut(s) | 942 |
| SacI | GAGCTC | 1 cut(s) | 1245 |
| SaqAI | TTAA | 4 cut(s) | 86, 366, 378, 462 |
| SatI | GCNGC | 4 cut(s) | 963, 1040, 1113, 1344 |
| Sau3AI | GATC | 2 cut(s) | 204, 1143 |
| Sau96I | GGNCC | 7 cut(s) | 125, 444, 913, 971, 972, 1286, 1376 |
| SchI | GAGTC | 2 cut(s) | 925, 1019 |
| SduI | GDGCHC | 3 cut(s) | 79, 975, 1245 |
| SfaNI | GCATC | 3 cut(s) | 576, 726, 1438 |
| SfcI | CTRYAG | 2 cut(s) | 303, 744 |
| Sfr274I | CTCGAG | 1 cut(s) | 37 |
| SinI | GGWCC | 2 cut(s) | 444, 913 |
| SlaI | CTCGAG | 1 cut(s) | 37 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 942 |
| SmlI | CTYRAG | 2 cut(s) | 37, 1046 |
| SmoI | CTYRAG | 2 cut(s) | 37, 1046 |
| SsiI | CCGC | 1 cut(s) | 1112 |
| SspMI | CTAG | 5 cut(s) | 260, 393, 668, 968, 1392 |
| SstI | GAGCTC | 1 cut(s) | 1245 |
| TaaI | ACNGT | 1 cut(s) | 944 |
| TaiI | ACGT | 1 cut(s) | 1157 |
| TaqI | TCGA | 4 cut(s) | 38, 69, 96, 207 |
| TauI | GCSGC | 1 cut(s) | 1115 |
| TfiI | GAWTC | 1 cut(s) | 491 |
| Tru1I | TTAA | 4 cut(s) | 86, 366, 378, 462 |
| Tru9I | TTAA | 4 cut(s) | 86, 366, 378, 462 |
| TscAI | CASTG | 3 cut(s) | 260, 430, 982 |
| TseFI | GTSAC | 3 cut(s) | 32, 251, 876 |
| TseI | GCWGC | 3 cut(s) | 962, 1039, 1343 |
| Tsp45I | GTSAC | 3 cut(s) | 32, 251, 876 |
| TspDTI | ATGAA | 5 cut(s) | 491, 587, 1092, 1209, 1552 |
| TspGWI | ACGGA | 2 cut(s) | 1110, 1240 |
| TspRI | CASTG | 3 cut(s) | 260, 430, 982 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 107 |
| VneI | GTGCAC | 1 cut(s) | 75 |
| VpaK11BI | GGWCC | 2 cut(s) | 444, 913 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1481 |
| XapI | RAATTY | 1 cut(s) | 1504 |
| XbaI | TCTAGA | 2 cut(s) | 392, 1391 |
| XceI | RCATGY | 3 cut(s) | 386, 528, 860 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1179 |
| XhoI | CTCGAG | 1 cut(s) | 37 |
| XmnI | GAANNNNTTC | 3 cut(s) | 273, 1145, 1551 |
| XspI | CTAG | 5 cut(s) | 260, 393, 668, 968, 1392 |
| Zsp2I | ATGCAT | 2 cut(s) | 907, 1127 |