Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000796

Physical Location & Seq

Genomic Coordinates Reverse (-)

26396143 .. 26403203

Gene Structure 7061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1192300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGAGTAATGTGCCGAAAGAAGCGATAGAAGTTGTAGCACAGAGCATCGGCATTTCCAATTTGGCCCCCGATGTCGCCCTTGCTCTTACCCCGGATGTTGAGTACCGGGTCCGAGAGATCATGCAGGAGGCAATTAAATGCATGCGGCATTCGAGACGGACTATTCTGACTACAGATGATGTGGATAGTGCACTTAAATTAAGAAACGTGGACCCAATATATGGGTTTGCCTCTGGAGATCCTTTGAGATTCAAGAGAGCTGCTGGACATAAGGATTTGTTCTACATTGATGACAAGGATGTGGAATTTAAAGATGTCATTGAAGCACCTTTACCAAGGGCACCTCTTGATGTATCAATTACTGCTCACTGGCTGGCAATTGAAGGTGTTCAACCTGCAATTCCAGAAAATGCTTCTGTTGAAGCACTTGCAGCGTACTCTGATGTCAAAAAATCTGAATACAAGGAAGATGGACTTCCTGTAGAGATTAAATTGCCTGTTAAGCATGTATTGTCAAGGGAACTTCAGCTTTACTTTGAGAAGATTACCGAGCTTACTCGCAGGTCTAGTTCCACCCTCTTCAAAGAAGCATTAGTGAGCTTGGCAACAGATTCCGGACTCCATGCGTTGGTTCCATACTTCACATGCTTTGTTGCTGATGAGGTTACACGGAATTTGAATAATTTCCCTCTGCTATTTGCTTTGATGCGTCTTGTCCGGAGCCTTCTTCAAAATCCTCATATACATATTGAACCTTATCTACAACAATTGATGCCATCTGTTATTACCTGCCTTGTTGCAAAAAGATTAGGGAATAGATACACTGACAATCACTGGGAACTTAGAAACTTTACAGCAAACCTGGTGTCTTCAATTTGCAAAAGATTTGGGCATGTTTATCACAATCTTCAACCACGTTTGACAAGGACTCTGCTTCATGCTTTCTTGGATCCAACAAAAGCATTATCTCAGCATTATGGTGCAATTCAAGGGATAGCAGCTCTTGGTCCCACTGTGGTTCGTCTACTCATACTTCCAAATCTTGATTCGTATATGCAACTTCTTGAGCCAGAAATGATAATTGAGAAGCAAAAGAATGAGATAAAGAGGCAAGAAGCTTGGCGTGTCTATGGGGCTTTGCTGAATGCTGCTGGCCAATGTATGCATGATCGGCTCAAGCTGTTCCATAGTCTGTTGTCTCCTCCAGCTCATGCTGTTTGGAAAAGGAATGGAAAGGTTGCAACAACAATGACAAATAAACGCAAAGCAAGCACAGACAACATGATGCAACAACCACCACTAAAAAAACTAGCTACTGATGGTGCGGTGGGAGCAATGCCAATGAACTCCATGCAAGTTGACATGCAAGGAGCTGCAGGTGGATTCTCCACATCTGTATCGATGTCCCACCAGTTACCAAAGGAACACATGTTGGGAAGGGAGGTCAGTGGGAAAACGGTAAAGGGGTCAACAGTTCTTGCTCAGGCGTGGAAGGAGGAGACAAACGCAGGACATCTAATGGCATCATTGTTCGAATATTTTGGTGAAAGCGTGTTGTCCTTTACACCCAAACCAGAGTTGTCTTTCTTCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000124 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044798 GO:0046483 GO:0051276 GO:0055029 GO:0061695 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TAF TAF6_C

Protein Analysis

532

Amino Acids

59.41

Weight (kDa)

8.58

Isoelectric Point (pI)

47.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAF	PF02969	1 - 66	2.9e-29	TATA box binding protein associated factor (TAF)
TAF6_C	PF07571	167 - 348	3.1e-75	TAF6 C-terminal HEAT repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04950 AT1G04950 AT1G04950
fragaria_vesca	FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670
malus_domestica	MD03G1192300.v1.1 MD09G1117900.v1.1 MD11G1208800.v1.1 MD17G1109200.v1.1
prunus_persica	Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.4G224900_v2.0.a1 Prupe.4G224900_v2.0.a1
pyrus_communis	pycom03g14470 pycom09g04320 pycom17g10170
rosa_chinensis	RchiOBHm_Chr2g0157381 RchiOBHm_Chr5g0041701 RchiOBHm_Chr5g0042101 RchiOBHm_Chr5g0042151 RchiOBHm_Chr5g0042161
rosa_laevigata	RLG00000020985 RLG00000034090
rosa_multiflora	Rmu_co8147136.1_g000001 Rmu_co8499353.1_g000001 Rmu_sc0000126.1_g000005 Rmu_sc0000126.1_g000020 Rmu_sc0000195.1_g000015 Rmu_sc0000861.1_g000026 Rmu_sc0001715.1_g000039 Rmu_sc0005255.1_g000023
rosa_roxburghii	Rroxscaffold_1G00038570 Rroxscaffold_1G00038810 Rroxscaffold_2G00092240
rosa_rugosa	Rorug02G0460600 Rorug02G0460700 Rorug02G0460800 Rorug05G0194900 Rorug05G0195000
rosa_samantha	Rh2AG525200 Rh2BG539300 Rh2CG509900 Rh2DG548400 Rh5AG280000 Rh5BG285500 Rh5BG288600 Rh5BG288900 Rh5CG317700 Rh5CG320200 Rh5DG294300 Rh5DG297700 Rh5DG298100 Rh5DG298200
rosa_wichuraiana	Rw0G001450 Rw2G043470 Rw5G026380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1367
Acc36I	ACCTGC	4 cut(s)	403, 552, 797, 1367
AccB1I	GGYRCC	1 cut(s)	340
AccB7I	CCANNNNNTGG	2 cut(s)	221, 628
AccI	GTMKAC	1 cut(s)	1024
AccIII	TCCGGA	2 cut(s)	614, 717
AciI	CCGC	2 cut(s)	145, 1325
AclWI	GGATC	3 cut(s)	233, 944, 957
AcoI	YGGCCR	1 cut(s)	1153
AcsI	RAATTY	2 cut(s)	305, 673
AcuI	CTGAAG	1 cut(s)	509
AfaI	GTAC	2 cut(s)	104, 437
AfiI	CCNNNNNNNGG	2 cut(s)	221, 628
AflIII	ACRYGT	1 cut(s)	1428
AjnI	CCWGG	1 cut(s)	861
AjuI	GAANNNNNNNTTGG	2 cut(s)	1030, 1062
Alw21I	GWGCWC	1 cut(s)	193
Alw26I	GTCTC	3 cut(s)	148, 1203, 1493
Alw44I	GTGCAC	1 cut(s)	189
AlwI	GGATC	3 cut(s)	233, 944, 957
Aor13HI	TCCGGA	2 cut(s)	614, 717
AoxI	GGCC	2 cut(s)	63, 1153
ApaLI	GTGCAC	1 cut(s)	189
ApeKI	GCWGC	5 cut(s)	260, 431, 998, 1148, 1373
ApoI	RAATTY	2 cut(s)	305, 673
ArsI	GACNNNNNNTTYG	2 cut(s)	851, 883
Asp700I	GAANNNNTTC	2 cut(s)	387, 683
AspS9I	GGNCC	4 cut(s)	64, 109, 211, 1007
AsuC2I	CCSGG	2 cut(s)	92, 107
AsuHPI	GGTGA	1 cut(s)	1556
AsuII	TTCGAA	1 cut(s)	1533
AvaII	GGWCC	3 cut(s)	109, 211, 1007
BaeGI	GKGCMC	2 cut(s)	193, 343
BaeI	ACNNNNGTAYC	2 cut(s)	1380, 1413
BalI	TGGCCA	1 cut(s)	1155
BamHI	GGATCC	1 cut(s)	949
BanI	GGYRCC	1 cut(s)	340
BarI	GAAGNNNNNNTAC	2 cut(s)	315, 347
BbsI	GAAGAC	1 cut(s)	861
Bbv12I	GWGCWC	1 cut(s)	193
BbvI	GCAGC	5 cut(s)	247, 443, 1010, 1135, 1360
BccI	CCATC	3 cut(s)	464, 784, 1313
BciT130I	CCWGG	1 cut(s)	863
BcnI	CCSGG	2 cut(s)	92, 107
BcoDI	GTCTC	3 cut(s)	148, 1203, 1493
BfaI	CTAG	2 cut(s)	567, 1310
BfmI	CTRYAG	3 cut(s)	171, 480, 1374
BfuAI	ACCTGC	4 cut(s)	403, 552, 797, 1367
BisI	GCNGC	6 cut(s)	146, 261, 432, 999, 1149, 1374
BlsI	GCNGC	6 cut(s)	147, 262, 433, 1000, 1150, 1375
Bme1390I	CCNGG	3 cut(s)	92, 107, 863
Bme18I	GGWCC	3 cut(s)	109, 211, 1007
BmgT120I	GGNCC	4 cut(s)	64, 109, 211, 1007
BmiI	GGNNCC	8 cut(s)	66, 110, 213, 342, 633, 722, 951, 1009
BmrFI	CCNGG	3 cut(s)	92, 107, 863
BmrI	ACTGGG	1 cut(s)	844
BmsI	GCATC	5 cut(s)	54, 696, 762, 1275, 1532
BmuI	ACTGGG	1 cut(s)	844
BpiI	GAAGAC	1 cut(s)	861
BpmI	CTGGAG	2 cut(s)	255, 1188
Bpu10I	CCTNAGC	1 cut(s)	1482
Bpu14I	TTCGAA	1 cut(s)	1533
BpuEI	CTTGAG	2 cut(s)	1085, 1160
BpuMI	CCSGG	2 cut(s)	92, 107
Bsa29I	ATCGAT	1 cut(s)	1400
BsaJI	CCNNGG	2 cut(s)	90, 335
BsaWI	WCCGGW	2 cut(s)	614, 717
Bsc4I	CCNNNNNNNGG	2 cut(s)	221, 628
Bse1I	ACTGG	3 cut(s)	374, 839, 1411
Bse3DI	GCAATG	1 cut(s)	1341
BseAI	TCCGGA	2 cut(s)	614, 717
BseBI	CCWGG	1 cut(s)	863
BseCI	ATCGAT	1 cut(s)	1400
BseDI	CCNNGG	2 cut(s)	90, 335
BseGI	GGATG	2 cut(s)	100, 304
BseLI	CCNNNNNNNGG	2 cut(s)	221, 628
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	2 cut(s)	983, 1496
BseNI	ACTGG	3 cut(s)	374, 839, 1411
BseRI	GAGGAG	2 cut(s)	1191, 1511
BseSI	GKGCMC	2 cut(s)	193, 343
BseXI	GCAGC	5 cut(s)	247, 443, 1010, 1135, 1360
BshFI	GGCC	2 cut(s)	65, 1155
BshNI	GGYRCC	1 cut(s)	340
BshVI	ATCGAT	1 cut(s)	1400
BsiHKAI	GWGCWC	1 cut(s)	193
BsiSI	CCGG	4 cut(s)	92, 106, 615, 718
BslFI	GGGAC	2 cut(s)	993, 1390
BslI	CCNNNNNNNGG	2 cut(s)	221, 628
BsmAI	GTCTC	3 cut(s)	148, 1203, 1493
BsmBI	CGTCTC	1 cut(s)	148
BsmFI	GGGAC	2 cut(s)	993, 1390
BsmI	GAATGC	2 cut(s)	148, 1150
BsnI	GGCC	2 cut(s)	65, 1155
Bsp119I	TTCGAA	1 cut(s)	1533
Bsp1286I	GDGCHC	2 cut(s)	193, 343
Bsp13I	TCCGGA	2 cut(s)	614, 717
Bsp143I	GATC	4 cut(s)	117, 238, 949, 1168
BspACI	CCGC	2 cut(s)	145, 1325
BspANI	GGCC	2 cut(s)	65, 1155
BspCNI	CTCAG	2 cut(s)	982, 1495
BspDI	ATCGAT	1 cut(s)	1400
BspEI	TCCGGA	2 cut(s)	614, 717
BspLI	GGNNCC	8 cut(s)	66, 110, 213, 342, 633, 722, 951, 1009
BspMAI	CTGCAG	1 cut(s)	1378
BspMI	ACCTGC	4 cut(s)	403, 552, 797, 1367
BspPI	GGATC	3 cut(s)	233, 944, 957
BspT104I	TTCGAA	1 cut(s)	1533
BspT107I	GGYRCC	1 cut(s)	340
BsrDI	GCAATG	1 cut(s)	1341
BsrI	ACTGG	3 cut(s)	374, 839, 1411
BssECI	CCNNGG	2 cut(s)	90, 335
BssMI	GATC	4 cut(s)	117, 238, 949, 1168
BssT1I	CCWWGG	1 cut(s)	335
Bst2UI	CCWGG	1 cut(s)	863
Bst4CI	ACNGT	3 cut(s)	1015, 1459, 1474
Bst6I	CTCTTC	1 cut(s)	584
BstBI	TTCGAA	1 cut(s)	1533
BstC8I	GCNNGC	4 cut(s)	143, 375, 1153, 1270
BstDEI	CTNAG	3 cut(s)	842, 969, 1482
BstF5I	GGATG	2 cut(s)	100, 304
BstKTI	GATC	4 cut(s)	120, 241, 952, 1171
BstMAI	GTCTC	3 cut(s)	148, 1203, 1493
BstMBI	GATC	4 cut(s)	117, 238, 949, 1168
BstMWI	GCNNNNNNNGC	5 cut(s)	431, 502, 1171, 1269, 1331
BstNI	CCWGG	1 cut(s)	863
BstNSI	RCATGY	6 cut(s)	145, 509, 648, 896, 1366, 1432
BstSCI	CCNGG	3 cut(s)	90, 105, 861
BstSFI	CTRYAG	3 cut(s)	171, 480, 1374
BstSLI	GKGCMC	2 cut(s)	193, 343
BstV1I	GCAGC	5 cut(s)	247, 443, 1010, 1135, 1360
BstV2I	GAAGAC	1 cut(s)	861
BstX2I	RGATCY	2 cut(s)	238, 949
BstYI	RGATCY	2 cut(s)	238, 949
Bsu15I	ATCGAT	1 cut(s)	1400
BsuRI	GGCC	2 cut(s)	65, 1155
BsuTUI	ATCGAT	1 cut(s)	1400
BtsCI	GGATG	2 cut(s)	100, 304
BtsIMutI	CAGTG	5 cut(s)	367, 822, 832, 1011, 1453
BveI	ACCTGC	4 cut(s)	403, 552, 797, 1367
Cac8I	GCNNGC	4 cut(s)	143, 375, 1153, 1270
Cfr13I	GGNCC	4 cut(s)	64, 109, 211, 1007
ClaI	ATCGAT	1 cut(s)	1400
CseI	GACGC	1 cut(s)	698
CsiI	ACCWGGT	1 cut(s)	861
Csp6I	GTAC	2 cut(s)	103, 436
CviQI	GTAC	2 cut(s)	103, 436
DdeI	CTNAG	3 cut(s)	842, 969, 1482
DpnI	GATC	4 cut(s)	119, 240, 951, 1170
DpnII	GATC	4 cut(s)	117, 238, 949, 1168
DraI	TTTAAA	1 cut(s)	310
EaeI	YGGCCR	1 cut(s)	1153
Eam1104I	CTCTTC	1 cut(s)	584
EarI	CTCTTC	1 cut(s)	584
Eco130I	CCWWGG	1 cut(s)	335
Eco47I	GGWCC	3 cut(s)	109, 211, 1007
Eco57I	CTGAAG	1 cut(s)	509
EcoRII	CCWGG	1 cut(s)	861
EcoT14I	CCWWGG	1 cut(s)	335
EcoT22I	ATGCAT	2 cut(s)	143, 1167
ErhI	CCWWGG	1 cut(s)	335
Esp3I	CGTCTC	1 cut(s)	148
FalI	AAGNNNNNCTT	2 cut(s)	459, 491
FaqI	GGGAC	2 cut(s)	993, 1390
FblI	GTMKAC	1 cut(s)	1024
Fnu4HI	GCNGC	6 cut(s)	146, 261, 432, 999, 1149, 1374
FokI	GGATG	2 cut(s)	107, 311
Fsp4HI	GCNGC	6 cut(s)	146, 261, 432, 999, 1149, 1374
FspBI	CTAG	2 cut(s)	567, 1310
GluI	GCNGC	6 cut(s)	146, 261, 432, 999, 1149, 1374
GsuI	CTGGAG	2 cut(s)	255, 1188
HaeIII	GGCC	2 cut(s)	65, 1155
HapII	CCGG	4 cut(s)	92, 106, 615, 718
HgaI	GACGC	1 cut(s)	698
HincII	GTYRAC	2 cut(s)	1360, 1470
HindII	GTYRAC	2 cut(s)	1360, 1470
HindIII	AAGCTT	1 cut(s)	1116
HinfI	GANTC	6 cut(s)	249, 611, 618, 928, 1046, 1383
HpaII	CCGG	4 cut(s)	92, 106, 615, 718
HphI	GGTGA	1 cut(s)	1556
Hpy166II	GTNNAC	5 cut(s)	191, 211, 1025, 1360, 1470
Hpy188I	TCNGA	4 cut(s)	113, 168, 442, 457
Hpy188III	TCNNGA	9 cut(s)	153, 234, 253, 347, 404, 615, 718, 1043, 1064
Hpy8I	GTNNAC	5 cut(s)	191, 211, 1025, 1360, 1470
HpyAV	CCTTC	4 cut(s)	377, 734, 1431, 1486
HpyCH4III	ACNGT	3 cut(s)	1015, 1459, 1474
HpyCH4IV	ACGT	2 cut(s)	207, 916
HpyF10VI	GCNNNNNNNGC	5 cut(s)	431, 502, 1171, 1269, 1331
HpyF3I	CTNAG	3 cut(s)	842, 969, 1482
HpySE526I	ACGT	2 cut(s)	207, 916
Kpn2I	TCCGGA	2 cut(s)	614, 717
Kzo9I	GATC	4 cut(s)	117, 238, 949, 1168
LmnI	GCTCC	3 cut(s)	720, 1331, 1370
Lsp1109I	GCAGC	5 cut(s)	247, 443, 1010, 1135, 1360
LweI	GCATC	5 cut(s)	54, 696, 762, 1275, 1532
MabI	ACCWGGT	1 cut(s)	861
MaeI	CTAG	2 cut(s)	567, 1310
MaeII	ACGT	2 cut(s)	207, 916
MaeIII	GTNAC	2 cut(s)	664, 1413
MalI	GATC	4 cut(s)	119, 240, 951, 1170
MboI	GATC	4 cut(s)	117, 238, 949, 1168
MboII	GAAGA	7 cut(s)	479, 553, 571, 719, 861, 899, 1579
MfeI	CAATTG	2 cut(s)	378, 767
MflI	RGATCY	2 cut(s)	238, 949
MhlI	GDGCHC	2 cut(s)	193, 343
MlsI	TGGCCA	1 cut(s)	1155
MluNI	TGGCCA	1 cut(s)	1155
MlyI	GAGTC	2 cut(s)	612, 922
MmeI	TCCRAC	1 cut(s)	977
Mox20I	TGGCCA	1 cut(s)	1155
Mph1103I	ATGCAT	2 cut(s)	143, 1167
MroI	TCCGGA	2 cut(s)	614, 717
MroXI	GAANNNNTTC	2 cut(s)	387, 683
MscI	TGGCCA	1 cut(s)	1155
MseI	TTAA	6 cut(s)	135, 195, 200, 309, 489, 501
MslI	CAYNNNNRTG	1 cut(s)	978
Msp20I	TGGCCA	1 cut(s)	1155
MspI	CCGG	4 cut(s)	92, 106, 615, 718
MspR9I	CCNGG	3 cut(s)	92, 107, 863
MunI	CAATTG	2 cut(s)	378, 767
Mva1269I	GAATGC	2 cut(s)	148, 1150
MvaI	CCWGG	1 cut(s)	863
MwoI	GCNNNNNNNGC	5 cut(s)	431, 502, 1171, 1269, 1331
NciI	CCSGG	2 cut(s)	92, 107
NdeII	GATC	4 cut(s)	117, 238, 949, 1168
NlaIV	GGNNCC	8 cut(s)	66, 110, 213, 342, 633, 722, 951, 1009
NsiI	ATGCAT	2 cut(s)	143, 1167
NspI	RCATGY	6 cut(s)	145, 509, 648, 896, 1366, 1432
NspV	TTCGAA	1 cut(s)	1533
PaeI	GCATGC	1 cut(s)	145
PaqCI	CACCTGC	1 cut(s)	1367
PciI	ACATGT	1 cut(s)	1428
PctI	GAATGC	2 cut(s)	148, 1150
PdmI	GAANNNNTTC	2 cut(s)	387, 683
PfeI	GAWTC	4 cut(s)	249, 611, 1046, 1383
PflMI	CCANNNNNTGG	2 cut(s)	221, 628
PkrI	GCNGC	6 cut(s)	147, 262, 433, 1000, 1150, 1375
PleI	GAGTC	2 cut(s)	612, 922
PpsI	GAGTC	2 cut(s)	612, 922
PscI	ACATGT	1 cut(s)	1428
Psp6I	CCWGG	1 cut(s)	861
PspGI	CCWGG	1 cut(s)	861
PspN4I	GGNNCC	8 cut(s)	66, 110, 213, 342, 633, 722, 951, 1009
PspPI	GGNCC	4 cut(s)	64, 109, 211, 1007
PsrI	GAACNNNNNNTAC	2 cut(s)	744, 776
PstI	CTGCAG	1 cut(s)	1378
PsuI	RGATCY	2 cut(s)	238, 949
RsaI	GTAC	2 cut(s)	104, 437
RsaNI	GTAC	2 cut(s)	103, 436
RseI	CAYNNNNRTG	1 cut(s)	978
SaqAI	TTAA	6 cut(s)	135, 195, 200, 309, 489, 501
SatI	GCNGC	6 cut(s)	146, 261, 432, 999, 1149, 1374
Sau3AI	GATC	4 cut(s)	117, 238, 949, 1168
Sau96I	GGNCC	4 cut(s)	64, 109, 211, 1007
SchI	GAGTC	2 cut(s)	612, 922
ScrFI	CCNGG	3 cut(s)	92, 107, 863
SduI	GDGCHC	2 cut(s)	193, 343
SexAI	ACCWGGT	1 cut(s)	861
SfaNI	GCATC	5 cut(s)	54, 696, 762, 1275, 1532
SfcI	CTRYAG	3 cut(s)	171, 480, 1374
SfuI	TTCGAA	1 cut(s)	1533
SinI	GGWCC	3 cut(s)	109, 211, 1007
SmiMI	CAYNNNNRTG	1 cut(s)	978
SmlI	CTYRAG	2 cut(s)	1064, 1175
SmoI	CTYRAG	2 cut(s)	1064, 1175
SphI	GCATGC	1 cut(s)	145
SsiI	CCGC	2 cut(s)	145, 1325
SspI	AATATT	1 cut(s)	1538
SspMI	CTAG	2 cut(s)	567, 1310
StyD4I	CCNGG	3 cut(s)	90, 105, 861
StyI	CCWWGG	1 cut(s)	335
TaaI	ACNGT	3 cut(s)	1015, 1459, 1474
TaiI	ACGT	2 cut(s)	210, 919
TaqI	TCGA	3 cut(s)	152, 1400, 1533
TauI	GCSGC	1 cut(s)	148
TfiI	GAWTC	4 cut(s)	249, 611, 1046, 1383
Tru1I	TTAA	6 cut(s)	135, 195, 200, 309, 489, 501
Tru9I	TTAA	6 cut(s)	135, 195, 200, 309, 489, 501
TscAI	CASTG	5 cut(s)	374, 829, 839, 1018, 1453
TseI	GCWGC	5 cut(s)	260, 431, 998, 1148, 1373
TspDTI	ATGAA	2 cut(s)	926, 1358
TspGWI	ACGGA	2 cut(s)	172, 685
TspRI	CASTG	5 cut(s)	374, 829, 839, 1018, 1453
Van91I	CCANNNNNTGG	2 cut(s)	221, 628
VneI	GTGCAC	1 cut(s)	189
VpaK11BI	GGWCC	3 cut(s)	109, 211, 1007
XapI	RAATTY	2 cut(s)	305, 673
XceI	RCATGY	6 cut(s)	145, 509, 648, 896, 1366, 1432
XmiI	GTMKAC	1 cut(s)	1024
XmnI	GAANNNNTTC	2 cut(s)	387, 683
XspI	CTAG	2 cut(s)	567, 1310
Zsp2I	ATGCAT	2 cut(s)	143, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.