Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 403, 1145 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 221 |
| AccI | GTMKAC | 1 cut(s) | 1374 |
| AccII | CGCG | 1 cut(s) | 919 |
| AccIII | TCCGGA | 1 cut(s) | 233 |
| AciI | CCGC | 6 cut(s) | 106, 247, 344, 961, 1211, 1298 |
| AclWI | GGATC | 2 cut(s) | 947, 960 |
| AcoI | YGGCCR | 1 cut(s) | 606 |
| AcsI | RAATTY | 1 cut(s) | 1543 |
| AcuI | CTGAAG | 1 cut(s) | 509 |
| AfaI | GTAC | 4 cut(s) | 342, 390, 426, 1035 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 221, 443, 1522 |
| AflII | CTTAAG | 1 cut(s) | 199 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1336, 1368 |
| AleI | CACNNNNGTG | 1 cut(s) | 981 |
| Alw26I | GTCTC | 4 cut(s) | 69, 843, 1206, 1500 |
| AlwI | GGATC | 2 cut(s) | 947, 960 |
| Ama87I | CYCGRG | 2 cut(s) | 151, 1613 |
| Aor13HI | TCCGGA | 1 cut(s) | 233 |
| AoxI | GGCC | 5 cut(s) | 606, 1010, 1227, 1325, 1414 |
| ApaI | GGGCCC | 1 cut(s) | 1014 |
| ApeKI | GCWGC | 4 cut(s) | 1001, 1078, 1151, 1382 |
| ApoI | RAATTY | 1 cut(s) | 1543 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1034, 1066 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1590 |
| AspLEI | GCGC | 2 cut(s) | 191, 1342 |
| AspS9I | GGNCC | 6 cut(s) | 239, 1010, 1011, 1227, 1325, 1415 |
| AsuHPI | GGTGA | 2 cut(s) | 1347, 1595 |
| AvaI | CYCGRG | 2 cut(s) | 151, 1613 |
| AvaII | GGWCC | 1 cut(s) | 239 |
| BaeGI | GKGCMC | 2 cut(s) | 15, 1014 |
| BalI | TGGCCA | 1 cut(s) | 608 |
| BamHI | GGATCC | 1 cut(s) | 952 |
| BanII | GRGCYC | 1 cut(s) | 1014 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 315, 347 |
| BauI | CACGAG | 1 cut(s) | 672 |
| BbsI | GAAGAC | 3 cut(s) | 719, 1419, 1593 |
| BbvI | GCAGC | 4 cut(s) | 988, 1065, 1163, 1394 |
| BccI | CCATC | 7 cut(s) | 179, 437, 464, 787, 1316, 1366, 1402 |
| BceAI | ACGGC | 1 cut(s) | 1477 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1401, 1435 |
| BcoDI | GTCTC | 4 cut(s) | 69, 843, 1206, 1500 |
| BfaI | CTAG | 6 cut(s) | 162, 419, 516, 866, 1007, 1559 |
| BfmI | CTRYAG | 2 cut(s) | 378, 1304 |
| BfoI | RGCGCY | 1 cut(s) | 1343 |
| BfrI | CTTAAG | 1 cut(s) | 199 |
| BfuAI | ACCTGC | 2 cut(s) | 403, 1145 |
| BglII | AGATCT | 1 cut(s) | 566 |
| BisI | GCNGC | 5 cut(s) | 1002, 1079, 1152, 1211, 1383 |
| BlsI | GCNGC | 5 cut(s) | 1003, 1080, 1153, 1212, 1384 |
| BmcAI | AGTACT | 1 cut(s) | 426 |
| Bme18I | GGWCC | 1 cut(s) | 239 |
| BmeT110I | CYCGRG | 2 cut(s) | 151, 1613 |
| BmgT120I | GGNCC | 6 cut(s) | 239, 1010, 1011, 1227, 1325, 1415 |
| BmiI | GGNNCC | 4 cut(s) | 954, 1012, 1138, 1417 |
| BmrI | ACTGGG | 2 cut(s) | 847, 1008 |
| BmsI | GCATC | 4 cut(s) | 154, 765, 1399, 1561 |
| BmuI | ACTGGG | 2 cut(s) | 847, 1008 |
| BpiI | GAAGAC | 3 cut(s) | 719, 1419, 1593 |
| BpmI | CTGGAG | 5 cut(s) | 51, 716, 896, 1067, 1371 |
| BpuEI | CTTGAG | 1 cut(s) | 1163 |
| BsaWI | WCCGGW | 1 cut(s) | 233 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1369, 1399 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 221, 443, 1522 |
| Bse1I | ACTGG | 5 cut(s) | 358, 374, 842, 913, 1014 |
| BseAI | TCCGGA | 1 cut(s) | 233 |
| BseGI | GGATG | 4 cut(s) | 304, 472, 625, 1540 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 221, 443, 1522 |
| BseMII | CTCAG | 3 cut(s) | 540, 1445, 1535 |
| BseNI | ACTGG | 5 cut(s) | 358, 374, 842, 913, 1014 |
| BseRI | GAGGAG | 2 cut(s) | 169, 405 |
| BseSI | GKGCMC | 2 cut(s) | 15, 1014 |
| BseXI | GCAGC | 4 cut(s) | 988, 1065, 1163, 1394 |
| BsgI | GTGCAG | 1 cut(s) | 749 |
| Bsh1236I | CGCG | 1 cut(s) | 919 |
| BshFI | GGCC | 5 cut(s) | 608, 1012, 1229, 1327, 1416 |
| BsiHKCI | CYCGRG | 2 cut(s) | 151, 1613 |
| BsiSI | CCGG | 1 cut(s) | 234 |
| BslFI | GGGAC | 1 cut(s) | 633 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 221, 443, 1522 |
| BsmAI | GTCTC | 4 cut(s) | 69, 843, 1206, 1500 |
| BsmBI | CGTCTC | 1 cut(s) | 1206 |
| BsmFI | GGGAC | 1 cut(s) | 633 |
| BsmI | GAATGC | 2 cut(s) | 415, 1153 |
| BsnI | GGCC | 5 cut(s) | 608, 1012, 1229, 1327, 1416 |
| BsoBI | CYCGRG | 2 cut(s) | 151, 1613 |
| Bsp120I | GGGCCC | 1 cut(s) | 1010 |
| Bsp1286I | GDGCHC | 2 cut(s) | 15, 1014 |
| Bsp13I | TCCGGA | 1 cut(s) | 233 |
| Bsp1407I | TGTACA | 1 cut(s) | 388 |
| Bsp143I | GATC | 3 cut(s) | 117, 566, 952 |
| BspACI | CCGC | 6 cut(s) | 106, 247, 344, 961, 1211, 1298 |
| BspANI | GGCC | 5 cut(s) | 608, 1012, 1229, 1327, 1416 |
| BspCNI | CTCAG | 3 cut(s) | 541, 1444, 1534 |
| BspEI | TCCGGA | 1 cut(s) | 233 |
| BspFNI | CGCG | 1 cut(s) | 919 |
| BspLI | GGNNCC | 4 cut(s) | 954, 1012, 1138, 1417 |
| BspMAI | CTGCAG | 1 cut(s) | 1308 |
| BspMI | ACCTGC | 2 cut(s) | 403, 1145 |
| BspPI | GGATC | 2 cut(s) | 947, 960 |
| BspQI | GCTCTTC | 1 cut(s) | 1284 |
| BspTI | CTTAAG | 1 cut(s) | 199 |
| BsrGI | TGTACA | 1 cut(s) | 388 |
| BsrI | ACTGG | 5 cut(s) | 358, 374, 842, 913, 1014 |
| BssMI | GATC | 3 cut(s) | 117, 566, 952 |
| BssSI | CACGAG | 1 cut(s) | 672 |
| Bst2BI | CACGAG | 1 cut(s) | 672 |
| Bst6I | CTCTTC | 2 cut(s) | 1103, 1284 |
| BstAFI | CTTAAG | 1 cut(s) | 199 |
| BstAUI | TGTACA | 1 cut(s) | 388 |
| BstC8I | GCNNGC | 6 cut(s) | 143, 375, 1268, 1414, 1481, 1485 |
| BstDEI | CTNAG | 4 cut(s) | 549, 845, 1431, 1521 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| BstF5I | GGATG | 4 cut(s) | 304, 472, 625, 1540 |
| BstFNI | CGCG | 1 cut(s) | 919 |
| BstH2I | RGCGCY | 1 cut(s) | 1343 |
| BstHHI | GCGC | 2 cut(s) | 191, 1342 |
| BstKTI | GATC | 3 cut(s) | 120, 569, 955 |
| BstMAI | GTCTC | 4 cut(s) | 69, 843, 1206, 1500 |
| BstMBI | GATC | 3 cut(s) | 117, 566, 952 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1388 |
| BstNSI | RCATGY | 3 cut(s) | 145, 651, 899 |
| BstSFI | CTRYAG | 2 cut(s) | 378, 1304 |
| BstSLI | GKGCMC | 2 cut(s) | 15, 1014 |
| BstUI | CGCG | 1 cut(s) | 919 |
| BstV1I | GCAGC | 4 cut(s) | 988, 1065, 1163, 1394 |
| BstV2I | GAAGAC | 3 cut(s) | 719, 1419, 1593 |
| BstX2I | RGATCY | 2 cut(s) | 566, 952 |
| BstYI | RGATCY | 2 cut(s) | 566, 952 |
| BsuRI | GGCC | 5 cut(s) | 608, 1012, 1229, 1327, 1416 |
| BtsCI | GGATG | 4 cut(s) | 304, 472, 625, 1540 |
| BtsI | GCAGTG | 1 cut(s) | 855 |
| BtsIMutI | CAGTG | 6 cut(s) | 367, 546, 609, 835, 855, 1021 |
| BveI | ACCTGC | 2 cut(s) | 403, 1145 |
| Cac8I | GCNNGC | 6 cut(s) | 143, 375, 1268, 1414, 1481, 1485 |
| CfoI | GCGC | 2 cut(s) | 191, 1342 |
| Cfr13I | GGNCC | 6 cut(s) | 239, 1010, 1011, 1227, 1325, 1415 |
| CseI | GACGC | 1 cut(s) | 908 |
| Csp6I | GTAC | 4 cut(s) | 341, 389, 425, 1034 |
| CviAII | CATG | 7 cut(s) | 121, 142, 648, 896, 1115, 1285, 1366 |
| CviQI | GTAC | 4 cut(s) | 341, 389, 425, 1034 |
| DdeI | CTNAG | 4 cut(s) | 549, 845, 1431, 1521 |
| DpnI | GATC | 3 cut(s) | 119, 568, 954 |
| DpnII | GATC | 3 cut(s) | 117, 566, 952 |
| DraI | TTTAAA | 1 cut(s) | 310 |
| EaeI | YGGCCR | 1 cut(s) | 606 |
| Eam1104I | CTCTTC | 2 cut(s) | 1103, 1284 |
| EarI | CTCTTC | 2 cut(s) | 1103, 1284 |
| Eco24I | GRGCYC | 1 cut(s) | 1014 |
| Eco47I | GGWCC | 1 cut(s) | 239 |
| Eco57I | CTGAAG | 1 cut(s) | 509 |
| Eco88I | CYCGRG | 2 cut(s) | 151, 1613 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| EcoO109I | RGGNCCY | 3 cut(s) | 239, 1010, 1415 |
| EcoRI | GAATTC | 1 cut(s) | 1543 |
| EcoT22I | ATGCAT | 4 cut(s) | 143, 147, 946, 1166 |
| EcoT38I | GRGCYC | 1 cut(s) | 1014 |
| Esp3I | CGTCTC | 1 cut(s) | 1206 |
| FaeI | CATG | 7 cut(s) | 124, 145, 651, 899, 1118, 1288, 1369 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 330, 362, 1523, 1555 |
| FaqI | GGGAC | 1 cut(s) | 633 |
| FatI | CATG | 7 cut(s) | 120, 141, 647, 895, 1114, 1284, 1365 |
| FblI | GTMKAC | 1 cut(s) | 1374 |
| Fnu4HI | GCNGC | 5 cut(s) | 1002, 1079, 1152, 1211, 1383 |
| FokI | GGATG | 4 cut(s) | 311, 479, 612, 1547 |
| FriOI | GRGCYC | 1 cut(s) | 1014 |
| Fsp4HI | GCNGC | 5 cut(s) | 1002, 1079, 1152, 1211, 1383 |
| FspBI | CTAG | 6 cut(s) | 162, 419, 516, 866, 1007, 1559 |
| GlaI | GCGC | 2 cut(s) | 190, 1341 |
| GluI | GCNGC | 5 cut(s) | 1002, 1079, 1152, 1211, 1383 |
| GsuI | CTGGAG | 5 cut(s) | 51, 716, 896, 1067, 1371 |
| HaeII | RGCGCY | 1 cut(s) | 1343 |
| HaeIII | GGCC | 5 cut(s) | 608, 1012, 1229, 1327, 1416 |
| HapII | CCGG | 1 cut(s) | 234 |
| HgaI | GACGC | 1 cut(s) | 908 |
| HhaI | GCGC | 2 cut(s) | 191, 1342 |
| Hin1II | CATG | 7 cut(s) | 124, 145, 651, 899, 1118, 1288, 1369 |
| Hin6I | GCGC | 2 cut(s) | 189, 1340 |
| HinP1I | GCGC | 2 cut(s) | 189, 1340 |
| HincII | GTYRAC | 1 cut(s) | 484 |
| HindII | GTYRAC | 1 cut(s) | 484 |
| HinfI | GANTC | 6 cut(s) | 51, 614, 724, 736, 970, 1049 |
| HpaII | CCGG | 1 cut(s) | 234 |
| HphI | GGTGA | 2 cut(s) | 1347, 1595 |
| Hpy166II | GTNNAC | 3 cut(s) | 389, 484, 1375 |
| Hpy188I | TCNGA | 4 cut(s) | 442, 571, 723, 1434 |
| Hpy188III | TCNNGA | 9 cut(s) | 68, 234, 404, 419, 618, 733, 1046, 1085, 1180 |
| Hpy8I | GTNNAC | 3 cut(s) | 389, 484, 1375 |
| Hpy99I | CGWCG | 1 cut(s) | 1426 |
| HpyAV | CCTTC | 4 cut(s) | 377, 447, 1037, 1525 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1388 |
| HpyF3I | CTNAG | 4 cut(s) | 549, 845, 1431, 1521 |
| Hsp92II | CATG | 7 cut(s) | 124, 145, 651, 899, 1118, 1288, 1369 |
| HspAI | GCGC | 2 cut(s) | 189, 1340 |
| Kpn2I | TCCGGA | 1 cut(s) | 233 |
| Kzo9I | GATC | 3 cut(s) | 117, 566, 952 |
| LguI | GCTCTTC | 1 cut(s) | 1284 |
| LmnI | GCTCC | 6 cut(s) | 331, 418, 520, 1136, 1390, 1396 |
| Lsp1109I | GCAGC | 4 cut(s) | 988, 1065, 1163, 1394 |
| LweI | GCATC | 4 cut(s) | 154, 765, 1399, 1561 |
| MaeI | CTAG | 6 cut(s) | 162, 419, 516, 866, 1007, 1559 |
| MaeIII | GTNAC | 2 cut(s) | 365, 787 |
| MalI | GATC | 3 cut(s) | 119, 568, 954 |
| MboI | GATC | 3 cut(s) | 117, 566, 952 |
| MboII | GAAGA | 7 cut(s) | 188, 719, 1120, 1301, 1344, 1419, 1598 |
| MfeI | CAATTG | 1 cut(s) | 770 |
| MflI | RGATCY | 2 cut(s) | 566, 952 |
| MhlI | GDGCHC | 2 cut(s) | 15, 1014 |
| MlsI | TGGCCA | 1 cut(s) | 608 |
| MluNI | TGGCCA | 1 cut(s) | 608 |
| MlyI | GAGTC | 3 cut(s) | 733, 964, 1058 |
| MmeI | TCCRAC | 1 cut(s) | 1229 |
| Mox20I | TGGCCA | 1 cut(s) | 608 |
| Mph1103I | ATGCAT | 4 cut(s) | 143, 147, 946, 1166 |
| MroI | TCCGGA | 1 cut(s) | 233 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1590 |
| MscI | TGGCCA | 1 cut(s) | 608 |
| MseI | TTAA | 6 cut(s) | 135, 200, 309, 489, 501, 707 |
| MslI | CAYNNNNRTG | 1 cut(s) | 981 |
| Msp20I | TGGCCA | 1 cut(s) | 608 |
| MspCI | CTTAAG | 1 cut(s) | 199 |
| MspI | CCGG | 1 cut(s) | 234 |
| MunI | CAATTG | 1 cut(s) | 770 |
| Mva1269I | GAATGC | 2 cut(s) | 415, 1153 |
| MvnI | CGCG | 1 cut(s) | 919 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1388 |
| NdeII | GATC | 3 cut(s) | 117, 566, 952 |
| NlaIII | CATG | 7 cut(s) | 124, 145, 651, 899, 1118, 1288, 1369 |
| NlaIV | GGNNCC | 4 cut(s) | 954, 1012, 1138, 1417 |
| NmuCI | GTSAC | 2 cut(s) | 365, 787 |
| NsiI | ATGCAT | 4 cut(s) | 143, 147, 946, 1166 |
| NspI | RCATGY | 3 cut(s) | 145, 651, 899 |
| OliI | CACNNNNGTG | 1 cut(s) | 981 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PaeR7I | CTCGAG | 1 cut(s) | 151 |
| PciSI | GCTCTTC | 1 cut(s) | 1284 |
| PctI | GAATGC | 2 cut(s) | 415, 1153 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1590 |
| PfeI | GAWTC | 3 cut(s) | 51, 614, 736 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 221 |
| PkrI | GCNGC | 5 cut(s) | 1003, 1080, 1153, 1212, 1384 |
| PleI | GAGTC | 3 cut(s) | 732, 964, 1057 |
| PpsI | GAGTC | 3 cut(s) | 732, 964, 1057 |
| PpuMI | RGGWCCY | 1 cut(s) | 239 |
| Psp5II | RGGWCCY | 1 cut(s) | 239 |
| PspN4I | GGNNCC | 4 cut(s) | 954, 1012, 1138, 1417 |
| PspOMI | GGGCCC | 1 cut(s) | 1010 |
| PspPI | GGNCC | 6 cut(s) | 239, 1010, 1011, 1227, 1325, 1415 |
| PspPPI | RGGWCCY | 1 cut(s) | 239 |
| PspXI | VCTCGAGB | 1 cut(s) | 151 |
| PstI | CTGCAG | 1 cut(s) | 1308 |
| PsuI | RGATCY | 2 cut(s) | 566, 952 |
| RsaI | GTAC | 4 cut(s) | 342, 390, 426, 1035 |
| RsaNI | GTAC | 4 cut(s) | 341, 389, 425, 1034 |
| RseI | CAYNNNNRTG | 1 cut(s) | 981 |
| SapI | GCTCTTC | 1 cut(s) | 1284 |
| SaqAI | TTAA | 6 cut(s) | 135, 200, 309, 489, 501, 707 |
| SatI | GCNGC | 5 cut(s) | 1002, 1079, 1152, 1211, 1383 |
| Sau3AI | GATC | 3 cut(s) | 117, 566, 952 |
| Sau96I | GGNCC | 6 cut(s) | 239, 1010, 1011, 1227, 1325, 1415 |
| ScaI | AGTACT | 1 cut(s) | 426 |
| SchI | GAGTC | 3 cut(s) | 733, 964, 1058 |
| SduI | GDGCHC | 2 cut(s) | 15, 1014 |
| SfaNI | GCATC | 4 cut(s) | 154, 765, 1399, 1561 |
| SfcI | CTRYAG | 2 cut(s) | 378, 1304 |
| Sfr274I | CTCGAG | 1 cut(s) | 151 |
| SinI | GGWCC | 1 cut(s) | 239 |
| SlaI | CTCGAG | 1 cut(s) | 151 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 981 |
| SmlI | CTYRAG | 3 cut(s) | 151, 199, 1178 |
| SmoI | CTYRAG | 3 cut(s) | 151, 199, 1178 |
| SphI | GCATGC | 1 cut(s) | 145 |
| SsiI | CCGC | 6 cut(s) | 106, 247, 344, 961, 1211, 1298 |
| SspMI | CTAG | 6 cut(s) | 162, 419, 516, 866, 1007, 1559 |
| TaqI | TCGA | 2 cut(s) | 99, 152 |
| TatI | WGTACW | 3 cut(s) | 388, 424, 1033 |
| TauI | GCSGC | 1 cut(s) | 1213 |
| TfiI | GAWTC | 3 cut(s) | 51, 614, 736 |
| Tru1I | TTAA | 6 cut(s) | 135, 200, 309, 489, 501, 707 |
| Tru9I | TTAA | 6 cut(s) | 135, 200, 309, 489, 501, 707 |
| TscAI | CASTG | 6 cut(s) | 374, 553, 616, 842, 862, 1021 |
| TseFI | GTSAC | 2 cut(s) | 365, 787 |
| TseI | GCWGC | 4 cut(s) | 1001, 1078, 1151, 1382 |
| Tsp45I | GTSAC | 2 cut(s) | 365, 787 |
| TspDTI | ATGAA | 3 cut(s) | 614, 1121, 1131 |
| TspGWI | ACGGA | 1 cut(s) | 101 |
| TspRI | CASTG | 6 cut(s) | 374, 553, 616, 842, 862, 1021 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 221 |
| Vha464I | CTTAAG | 1 cut(s) | 199 |
| VpaK11BI | GGWCC | 1 cut(s) | 239 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| XapI | RAATTY | 1 cut(s) | 1543 |
| XbaI | TCTAGA | 1 cut(s) | 418 |
| XceI | RCATGY | 3 cut(s) | 145, 651, 899 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 467 |
| XhoI | CTCGAG | 1 cut(s) | 151 |
| XmiI | GTMKAC | 1 cut(s) | 1374 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1590 |
| XspI | CTAG | 6 cut(s) | 162, 419, 516, 866, 1007, 1559 |
| ZrmI | AGTACT | 1 cut(s) | 426 |
| Zsp2I | ATGCAT | 4 cut(s) | 143, 147, 946, 1166 |