Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 897 |
| Acc36I | ACCTGC | 2 cut(s) | 403, 797 |
| AccB1I | GGYRCC | 1 cut(s) | 325 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 221, 628 |
| AccI | GTMKAC | 2 cut(s) | 435, 566 |
| AccII | CGCG | 1 cut(s) | 114 |
| AccIII | TCCGGA | 1 cut(s) | 717 |
| AciI | CCGC | 1 cut(s) | 1149 |
| AclWI | GGATC | 1 cut(s) | 233 |
| AcoI | YGGCCR | 1 cut(s) | 1154 |
| AcsI | RAATTY | 1 cut(s) | 305 |
| AcuI | CTGAAG | 2 cut(s) | 509, 893 |
| AfaI | GTAC | 3 cut(s) | 104, 510, 928 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 221, 628 |
| AflIII | ACRYGT | 2 cut(s) | 644, 745 |
| AgsI | TTSAA | 9 cut(s) | 253, 305, 392, 422, 679, 731, 752, 873, 989 |
| AjnI | CCWGG | 1 cut(s) | 861 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1030, 1062 |
| AluBI | AGCT | 5 cut(s) | 260, 529, 600, 1001, 1118 |
| AluI | AGCT | 5 cut(s) | 260, 529, 600, 1001, 1118 |
| Alw21I | GWGCWC | 1 cut(s) | 193 |
| Alw26I | GTCTC | 2 cut(s) | 69, 148 |
| Alw44I | GTGCAC | 1 cut(s) | 189 |
| AlwI | GGATC | 1 cut(s) | 233 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 362 |
| Ama87I | CYCGRG | 1 cut(s) | 151 |
| Aor13HI | TCCGGA | 1 cut(s) | 717 |
| AoxI | GGCC | 3 cut(s) | 129, 1134, 1154 |
| ApaLI | GTGCAC | 1 cut(s) | 189 |
| ApeKI | GCWGC | 3 cut(s) | 260, 998, 1142 |
| ApoI | RAATTY | 1 cut(s) | 305 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 387 |
| AspLEI | GCGC | 2 cut(s) | 40, 983 |
| AspS9I | GGNCC | 3 cut(s) | 949, 1007, 1134 |
| AsuC2I | CCSGG | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 1 cut(s) | 79 |
| AsuNHI | GCTAGC | 1 cut(s) | 994 |
| AvaI | CYCGRG | 1 cut(s) | 151 |
| AvaII | GGWCC | 2 cut(s) | 949, 1007 |
| BaeGI | GKGCMC | 1 cut(s) | 193 |
| BalI | TGGCCA | 1 cut(s) | 1156 |
| BanI | GGYRCC | 1 cut(s) | 325 |
| BanII | GRGCYC | 1 cut(s) | 621 |
| BbsI | GAAGAC | 1 cut(s) | 474 |
| Bbv12I | GWGCWC | 1 cut(s) | 193 |
| BbvI | GCAGC | 3 cut(s) | 247, 1010, 1129 |
| BccI | CCATC | 2 cut(s) | 140, 630 |
| BciT130I | CCWGG | 1 cut(s) | 863 |
| BcnI | CCSGG | 1 cut(s) | 107 |
| BcoDI | GTCTC | 2 cut(s) | 69, 148 |
| BfaI | CTAG | 2 cut(s) | 809, 995 |
| BfmI | CTRYAG | 1 cut(s) | 480 |
| BfuAI | ACCTGC | 2 cut(s) | 403, 797 |
| BisI | GCNGC | 4 cut(s) | 261, 999, 1143, 1150 |
| BlsI | GCNGC | 4 cut(s) | 262, 1000, 1144, 1151 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 863 |
| Bme18I | GGWCC | 2 cut(s) | 949, 1007 |
| BmeT110I | CYCGRG | 1 cut(s) | 151 |
| BmgT120I | GGNCC | 3 cut(s) | 949, 1007, 1134 |
| BmiI | GGNNCC | 8 cut(s) | 213, 327, 620, 633, 722, 951, 1009, 1135 |
| BmrFI | CCNGG | 2 cut(s) | 107, 863 |
| BmrI | ACTGGG | 1 cut(s) | 844 |
| BmsI | GCATC | 1 cut(s) | 762 |
| BmtI | GCTAGC | 1 cut(s) | 998 |
| BmuI | ACTGGG | 1 cut(s) | 844 |
| BpiI | GAAGAC | 1 cut(s) | 474 |
| BpmI | CTGGAG | 3 cut(s) | 51, 255, 399 |
| BpuEI | CTTGAG | 2 cut(s) | 1085, 1103 |
| BpuMI | CCSGG | 1 cut(s) | 107 |
| BsaAI | YACGTR | 1 cut(s) | 645 |
| BsaWI | WCCGGW | 1 cut(s) | 717 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 221, 628 |
| Bse1I | ACTGG | 3 cut(s) | 374, 416, 839 |
| Bse3DI | GCAATG | 1 cut(s) | 651 |
| BseAI | TCCGGA | 1 cut(s) | 717 |
| BseBI | CCWGG | 1 cut(s) | 863 |
| BseGI | GGATG | 2 cut(s) | 304, 622 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 221, 628 |
| BseMI | GCAATG | 1 cut(s) | 651 |
| BseNI | ACTGG | 3 cut(s) | 374, 416, 839 |
| BseRI | GAGGAG | 1 cut(s) | 680 |
| BseSI | GKGCMC | 1 cut(s) | 193 |
| BseXI | GCAGC | 3 cut(s) | 247, 1010, 1129 |
| Bsh1236I | CGCG | 1 cut(s) | 114 |
| BshFI | GGCC | 3 cut(s) | 131, 1136, 1156 |
| BshNI | GGYRCC | 1 cut(s) | 325 |
| BsiHKAI | GWGCWC | 1 cut(s) | 193 |
| BsiHKCI | CYCGRG | 1 cut(s) | 151 |
| BsiSI | CCGG | 2 cut(s) | 106, 718 |
| BslFI | GGGAC | 1 cut(s) | 993 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 221, 628 |
| BsmAI | GTCTC | 2 cut(s) | 69, 148 |
| BsmBI | CGTCTC | 1 cut(s) | 148 |
| BsmFI | GGGAC | 1 cut(s) | 993 |
| BsnI | GGCC | 3 cut(s) | 131, 1136, 1156 |
| BsoBI | CYCGRG | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 2 cut(s) | 193, 621 |
| Bsp13I | TCCGGA | 1 cut(s) | 717 |
| Bsp143I | GATC | 2 cut(s) | 117, 238 |
| Bsp68I | TCGCGA | 1 cut(s) | 114 |
| BspACI | CCGC | 1 cut(s) | 1149 |
| BspANI | GGCC | 3 cut(s) | 131, 1136, 1156 |
| BspEI | TCCGGA | 1 cut(s) | 717 |
| BspFNI | CGCG | 1 cut(s) | 114 |
| BspLI | GGNNCC | 8 cut(s) | 213, 327, 620, 633, 722, 951, 1009, 1135 |
| BspMI | ACCTGC | 2 cut(s) | 403, 797 |
| BspOI | GCTAGC | 1 cut(s) | 998 |
| BspPI | GGATC | 1 cut(s) | 233 |
| BspT107I | GGYRCC | 1 cut(s) | 325 |
| BsrDI | GCAATG | 1 cut(s) | 651 |
| BsrI | ACTGG | 3 cut(s) | 374, 416, 839 |
| BssMI | GATC | 2 cut(s) | 117, 238 |
| BssNAI | GTATAC | 1 cut(s) | 436 |
| Bst1107I | GTATAC | 1 cut(s) | 436 |
| Bst2UI | CCWGG | 1 cut(s) | 863 |
| BstBAI | YACGTR | 1 cut(s) | 645 |
| BstC8I | GCNNGC | 6 cut(s) | 143, 375, 996, 1147, 1154, 1164 |
| BstDEI | CTNAG | 1 cut(s) | 842 |
| BstF5I | GGATG | 2 cut(s) | 304, 622 |
| BstFNI | CGCG | 1 cut(s) | 114 |
| BstHHI | GCGC | 2 cut(s) | 40, 983 |
| BstKTI | GATC | 2 cut(s) | 120, 241 |
| BstMAI | GTCTC | 2 cut(s) | 69, 148 |
| BstMBI | GATC | 2 cut(s) | 117, 238 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 502, 1142 |
| BstNI | CCWGG | 1 cut(s) | 863 |
| BstNSI | RCATGY | 3 cut(s) | 145, 509, 1166 |
| BstSCI | CCNGG | 2 cut(s) | 105, 861 |
| BstSFI | CTRYAG | 1 cut(s) | 480 |
| BstSLI | GKGCMC | 1 cut(s) | 193 |
| BstUI | CGCG | 1 cut(s) | 114 |
| BstV1I | GCAGC | 3 cut(s) | 247, 1010, 1129 |
| BstV2I | GAAGAC | 1 cut(s) | 474 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 977 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BstZ17I | GTATAC | 1 cut(s) | 436 |
| BsuRI | GGCC | 3 cut(s) | 131, 1136, 1156 |
| BtsCI | GGATG | 2 cut(s) | 304, 622 |
| BtsIMutI | CAGTG | 2 cut(s) | 367, 832 |
| BtuMI | TCGCGA | 1 cut(s) | 114 |
| BveI | ACCTGC | 2 cut(s) | 403, 797 |
| Cac8I | GCNNGC | 6 cut(s) | 143, 375, 996, 1147, 1154, 1164 |
| CaiI | CAGNNNCTG | 1 cut(s) | 362 |
| CfoI | GCGC | 2 cut(s) | 40, 983 |
| Cfr13I | GGNCC | 3 cut(s) | 949, 1007, 1134 |
| CseI | GACGC | 1 cut(s) | 698 |
| CsiI | ACCWGGT | 1 cut(s) | 861 |
| Csp6I | GTAC | 3 cut(s) | 103, 509, 927 |
| CviAII | CATG | 6 cut(s) | 121, 142, 506, 1112, 1163, 1167 |
| CviQI | GTAC | 3 cut(s) | 103, 509, 927 |
| DdeI | CTNAG | 1 cut(s) | 842 |
| DpnI | GATC | 2 cut(s) | 119, 240 |
| DpnII | GATC | 2 cut(s) | 117, 238 |
| DraI | TTTAAA | 2 cut(s) | 310, 583 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 897 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 897 |
| EaeI | YGGCCR | 1 cut(s) | 1154 |
| Eco24I | GRGCYC | 1 cut(s) | 621 |
| Eco47I | GGWCC | 2 cut(s) | 949, 1007 |
| Eco57I | CTGAAG | 2 cut(s) | 509, 893 |
| Eco88I | CYCGRG | 1 cut(s) | 151 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1134 |
| EcoRII | CCWGG | 1 cut(s) | 861 |
| EcoT22I | ATGCAT | 3 cut(s) | 143, 1164, 1168 |
| EcoT38I | GRGCYC | 1 cut(s) | 621 |
| Esp3I | CGTCTC | 1 cut(s) | 148 |
| FaeI | CATG | 6 cut(s) | 124, 145, 509, 1115, 1166, 1170 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 459, 491 |
| FaqI | GGGAC | 1 cut(s) | 993 |
| FatI | CATG | 6 cut(s) | 120, 141, 505, 1111, 1162, 1166 |
| FblI | GTMKAC | 2 cut(s) | 435, 566 |
| Fnu4HI | GCNGC | 4 cut(s) | 261, 999, 1143, 1150 |
| FokI | GGATG | 2 cut(s) | 311, 609 |
| FriOI | GRGCYC | 1 cut(s) | 621 |
| Fsp4HI | GCNGC | 4 cut(s) | 261, 999, 1143, 1150 |
| FspBI | CTAG | 2 cut(s) | 809, 995 |
| GlaI | GCGC | 2 cut(s) | 39, 982 |
| GluI | GCNGC | 4 cut(s) | 261, 999, 1143, 1150 |
| GsuI | CTGGAG | 3 cut(s) | 51, 255, 399 |
| HaeIII | GGCC | 3 cut(s) | 131, 1136, 1156 |
| HapII | CCGG | 2 cut(s) | 106, 718 |
| HgaI | GACGC | 1 cut(s) | 698 |
| HhaI | GCGC | 2 cut(s) | 40, 983 |
| Hin1II | CATG | 6 cut(s) | 124, 145, 509, 1115, 1166, 1170 |
| Hin6I | GCGC | 2 cut(s) | 38, 981 |
| HinP1I | GCGC | 2 cut(s) | 38, 981 |
| HindIII | AAGCTT | 1 cut(s) | 1116 |
| HinfI | GANTC | 2 cut(s) | 611, 1046 |
| HpaII | CCGG | 2 cut(s) | 106, 718 |
| HphI | GGTGA | 1 cut(s) | 79 |
| Hpy166II | GTNNAC | 3 cut(s) | 191, 436, 567 |
| Hpy188I | TCNGA | 3 cut(s) | 168, 442, 457 |
| Hpy188III | TCNNGA | 9 cut(s) | 68, 113, 153, 234, 253, 404, 718, 1043, 1064 |
| Hpy8I | GTNNAC | 3 cut(s) | 191, 436, 567 |
| HpyAV | CCTTC | 3 cut(s) | 377, 734, 786 |
| HpyCH4IV | ACGT | 4 cut(s) | 9, 644, 747, 916 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 502, 1142 |
| HpyF3I | CTNAG | 1 cut(s) | 842 |
| HpySE526I | ACGT | 4 cut(s) | 9, 644, 747, 916 |
| Hsp92II | CATG | 6 cut(s) | 124, 145, 509, 1115, 1166, 1170 |
| HspAI | GCGC | 2 cut(s) | 38, 981 |
| Kpn2I | TCCGGA | 1 cut(s) | 717 |
| Kzo9I | GATC | 2 cut(s) | 117, 238 |
| LmnI | GCTCC | 4 cut(s) | 211, 418, 624, 720 |
| Lsp1109I | GCAGC | 3 cut(s) | 247, 1010, 1129 |
| LweI | GCATC | 1 cut(s) | 762 |
| MabI | ACCWGGT | 1 cut(s) | 861 |
| MaeI | CTAG | 2 cut(s) | 809, 995 |
| MaeII | ACGT | 4 cut(s) | 9, 644, 747, 916 |
| MaeIII | GTNAC | 2 cut(s) | 358, 664 |
| MalI | GATC | 2 cut(s) | 119, 240 |
| MboI | GATC | 2 cut(s) | 117, 238 |
| MboII | GAAGA | 5 cut(s) | 479, 553, 719, 861, 899 |
| MfeI | CAATTG | 2 cut(s) | 24, 767 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MhlI | GDGCHC | 2 cut(s) | 193, 621 |
| MlsI | TGGCCA | 1 cut(s) | 1156 |
| MluNI | TGGCCA | 1 cut(s) | 1156 |
| MnlI | CCTC | 9 cut(s) | 22, 121, 240, 316, 580, 655, 701, 747, 1101 |
| Mox20I | TGGCCA | 1 cut(s) | 1156 |
| Mph1103I | ATGCAT | 3 cut(s) | 143, 1164, 1168 |
| MroI | TCCGGA | 1 cut(s) | 717 |
| MroXI | GAANNNNTTC | 1 cut(s) | 387 |
| MscI | TGGCCA | 1 cut(s) | 1156 |
| MseI | TTAA | 6 cut(s) | 195, 309, 489, 501, 582, 704 |
| Msp20I | TGGCCA | 1 cut(s) | 1156 |
| MspI | CCGG | 2 cut(s) | 106, 718 |
| MspR9I | CCNGG | 2 cut(s) | 107, 863 |
| MunI | CAATTG | 2 cut(s) | 24, 767 |
| MvaI | CCWGG | 1 cut(s) | 863 |
| MvnI | CGCG | 1 cut(s) | 114 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 502, 1142 |
| NciI | CCSGG | 1 cut(s) | 107 |
| NdeII | GATC | 2 cut(s) | 117, 238 |
| NheI | GCTAGC | 1 cut(s) | 994 |
| NlaIII | CATG | 6 cut(s) | 124, 145, 509, 1115, 1166, 1170 |
| NlaIV | GGNNCC | 8 cut(s) | 213, 327, 620, 633, 722, 951, 1009, 1135 |
| NruI | TCGCGA | 1 cut(s) | 114 |
| NsiI | ATGCAT | 3 cut(s) | 143, 1164, 1168 |
| NspI | RCATGY | 3 cut(s) | 145, 509, 1166 |
| PaeI | GCATGC | 2 cut(s) | 145, 1166 |
| PaeR7I | CTCGAG | 1 cut(s) | 151 |
| PdmI | GAANNNNTTC | 1 cut(s) | 387 |
| PfeI | GAWTC | 2 cut(s) | 611, 1046 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 221, 628 |
| PkrI | GCNGC | 4 cut(s) | 262, 1000, 1144, 1151 |
| Ppu21I | YACGTR | 1 cut(s) | 645 |
| Psp6I | CCWGG | 1 cut(s) | 861 |
| PspGI | CCWGG | 1 cut(s) | 861 |
| PspN4I | GGNNCC | 8 cut(s) | 213, 327, 620, 633, 722, 951, 1009, 1135 |
| PspPI | GGNCC | 3 cut(s) | 949, 1007, 1134 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 744, 776 |
| PstNI | CAGNNNCTG | 1 cut(s) | 362 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| RruI | TCGCGA | 1 cut(s) | 114 |
| RsaI | GTAC | 3 cut(s) | 104, 510, 928 |
| RsaNI | GTAC | 3 cut(s) | 103, 509, 927 |
| SaqAI | TTAA | 6 cut(s) | 195, 309, 489, 501, 582, 704 |
| SatI | GCNGC | 4 cut(s) | 261, 999, 1143, 1150 |
| Sau3AI | GATC | 2 cut(s) | 117, 238 |
| Sau96I | GGNCC | 3 cut(s) | 949, 1007, 1134 |
| ScrFI | CCNGG | 2 cut(s) | 107, 863 |
| SduI | GDGCHC | 2 cut(s) | 193, 621 |
| SexAI | ACCWGGT | 1 cut(s) | 861 |
| SfaNI | GCATC | 1 cut(s) | 762 |
| SfcI | CTRYAG | 1 cut(s) | 480 |
| Sfr274I | CTCGAG | 1 cut(s) | 151 |
| SinI | GGWCC | 2 cut(s) | 949, 1007 |
| SlaI | CTCGAG | 1 cut(s) | 151 |
| SmlI | CTYRAG | 3 cut(s) | 151, 1064, 1082 |
| SmoI | CTYRAG | 3 cut(s) | 151, 1064, 1082 |
| SphI | GCATGC | 2 cut(s) | 145, 1166 |
| SsiI | CCGC | 1 cut(s) | 1149 |
| SspMI | CTAG | 2 cut(s) | 809, 995 |
| StyD4I | CCNGG | 2 cut(s) | 105, 861 |
| TaiI | ACGT | 4 cut(s) | 12, 647, 750, 919 |
| TaqI | TCGA | 4 cut(s) | 99, 152, 381, 1044 |
| TatI | WGTACW | 1 cut(s) | 508 |
| TauI | GCSGC | 1 cut(s) | 1152 |
| TfiI | GAWTC | 2 cut(s) | 611, 1046 |
| Tru1I | TTAA | 6 cut(s) | 195, 309, 489, 501, 582, 704 |
| Tru9I | TTAA | 6 cut(s) | 195, 309, 489, 501, 582, 704 |
| TscAI | CASTG | 2 cut(s) | 374, 839 |
| TseI | GCWGC | 3 cut(s) | 260, 998, 1142 |
| TspDTI | ATGAA | 2 cut(s) | 640, 1128 |
| TspGWI | ACGGA | 3 cut(s) | 172, 486, 615 |
| TspRI | CASTG | 2 cut(s) | 374, 839 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 221, 628 |
| VneI | GTGCAC | 1 cut(s) | 189 |
| VpaK11BI | GGWCC | 2 cut(s) | 949, 1007 |
| XapI | RAATTY | 1 cut(s) | 305 |
| XceI | RCATGY | 3 cut(s) | 145, 509, 1166 |
| XhoI | CTCGAG | 1 cut(s) | 151 |
| XmiI | GTMKAC | 2 cut(s) | 435, 566 |
| XmnI | GAANNNNTTC | 1 cut(s) | 387 |
| XspI | CTAG | 2 cut(s) | 809, 995 |
| Zsp2I | ATGCAT | 3 cut(s) | 143, 1164, 1168 |