Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000796

Physical Location & Seq

Genomic Coordinates Forward (+)

9052534 .. 9063410

Gene Structure 10877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1117900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGAGCATTGTGCCCAAAGAGAATGTTGAAGTAATTGCACAGAGCATAGGAATCAACAACTTGTCTCCAGATGCTGCTCTTGCTCTCGCCCCCGATGTCGAATACCGCCTCCGTGAGATCATGCAGGAGGCGATTAAATGCATGCGTCACTCGAGGAGAACTAGATTGACAGCTGACGACGTTGATGGTGCACTCAACATAAGAAATGTAGAGCCAATCTATGGTTATGTTTCCGGAGGTCCTTTGCGGTTCAAAAGAGCTATTGGGCACAGGGATTTGTATTACATTGACGAAAAGGATGTGGATTTTAAAGATGTGATTGAAGCTCCTTTACCAAAAGCACCGCTTGATACTGGAATTGTTTGTCACTGGCTTGCTATAGAAGGCGTACAACCTGCAATTCCAGAAAATGCTCCTCTAGAAGTACTCGCACCTACTTCTGATGGTAAAAGTTATGAACAAAAGGGTGATGGACTTCCTGTTGACATTAAATTACCTGTTAAGCATGTATTATCTAGGGAGCTTCAGTTATATTTTGACAAAATCACTGAGCTTGTTGTGAGTAGGTCTGATTTAGTTTTGTTTAAAGAGGCATTAGTGAGTTTGGCCACTGATTCGGGACTTCATCCATTAGTTCCTTATTTCACATGCTTTATCGCTGACGAGGTTGCTCGTGGCTTGAATGATTATGCACTTCTATTCGCTTTGATGCGAGTTGTTCAGAGTCTTCTCCAGAATCCTCACATACACATAGAACCTTATCTGCACCAATTGATGCCATCTGTGGTCACTTGCCTTGTTGCAAAAAGGTTAGGCAACAGGTTTGCTGACAATCATTGGGAACTTAGAGACTTCACTGCAACACTGGTTGCTTCAATCTGCAAAAGGTTTGGGCATGTATATAACACTCTCCAGTCGCGTCTTACGAAAACTTTGGTCAATGCATTTTTGGACCCAAAGCGGACATTGACTCAACACTATGGTGCAATTCAAGGTTTAGCTGCTCTGGGGCCCAATGTGGTTCGCCTTCTTGTACTGCCAAATCTGGAGTCATATCTGCGACTTCTTGAACCAGAGCTTCTTCTTGACAAGCAAAAGAATGAGATGAAGCGGCATGAAGCATGGCGTGTGTATGGAGCCTTGTTGAATGCAGCAGGTCAATGCATATATGACAGGCTCAAGATGTTCCCACTTTTGCCATCTCCAGCGCCGCAATCTTACTGGAACACCAAGGGGAGACTCCATATTACTCTGCCAAATAAGCGCAAGCAAAGTGCGGAGCACATGGAAGAGCAACCACCCCTGAAGAAAATTACAACTGATGGGCCAACGGATTTGTCACCAACTACTTCTTCACCATCTCACATGGAAGTAGACACAGCAGCTCCAGCTCCAGCTCCAGCAGGGGATACTGATGCAGGCCCCTCGTCGTCTTCTCAGAAGATGCCGAATGAGAGCATTCCACACATAACAAGTAGAATGGGCAAGCCTGTTGATCTGTCTCTAAAGAAATCAGCTCTCCTCACTCATGTTTGGAAGGATGACTTGAATTCTGGGCATCTCCTGGTTTCATTGTTTGAGTTGTTCGGTGAAAACATCCTCTCCTTCGTTCCAGCTCCCGAGATGTGTTTATTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TAF TAF6_C

Protein Analysis

547

Amino Acids

60.82

Weight (kDa)

6.42

Isoelectric Point (pI)

54.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAF	PF02969	1 - 65	5.4e-30	TATA box binding protein associated factor (TAF)
TAF6_C	PF07571	167 - 350	2.3e-74	TAF6 C-terminal HEAT repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04950 AT1G04950 AT1G04950
fragaria_vesca	FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_3g23640 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670 FvH4_6g41670
malus_domestica	MD03G1192300.v1.1 MD09G1117900.v1.1 MD11G1208800.v1.1 MD17G1109200.v1.1
prunus_persica	Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.3G206000_v2.0.a1 Prupe.4G224900_v2.0.a1 Prupe.4G224900_v2.0.a1
pyrus_communis	pycom03g14470 pycom09g04320 pycom17g10170
rosa_chinensis	RchiOBHm_Chr2g0157381 RchiOBHm_Chr5g0041701 RchiOBHm_Chr5g0042101 RchiOBHm_Chr5g0042151 RchiOBHm_Chr5g0042161
rosa_laevigata	RLG00000020985 RLG00000034090
rosa_multiflora	Rmu_co8147136.1_g000001 Rmu_co8499353.1_g000001 Rmu_sc0000126.1_g000005 Rmu_sc0000126.1_g000020 Rmu_sc0000195.1_g000015 Rmu_sc0000861.1_g000026 Rmu_sc0001715.1_g000039 Rmu_sc0005255.1_g000023
rosa_roxburghii	Rroxscaffold_1G00038570 Rroxscaffold_1G00038810 Rroxscaffold_2G00092240
rosa_rugosa	Rorug02G0460600 Rorug02G0460700 Rorug02G0460800 Rorug05G0194900 Rorug05G0195000
rosa_samantha	Rh2AG525200 Rh2BG539300 Rh2CG509900 Rh2DG548400 Rh5AG280000 Rh5BG285500 Rh5BG288600 Rh5BG288900 Rh5CG317700 Rh5CG320200 Rh5DG294300 Rh5DG297700 Rh5DG298100 Rh5DG298200
rosa_wichuraiana	Rw0G001450 Rw2G043470 Rw5G026380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	403, 1145
AccB7I	CCANNNNNTGG	1 cut(s)	221
AccI	GTMKAC	1 cut(s)	1374
AccII	CGCG	1 cut(s)	919
AccIII	TCCGGA	1 cut(s)	233
AciI	CCGC	7 cut(s)	106, 247, 344, 961, 1111, 1211, 1277
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	1 cut(s)	1549
AcuI	CTGAAG	2 cut(s)	509, 1325
AfaI	GTAC	3 cut(s)	390, 426, 1035
AfiI	CCNNNNNNNGG	1 cut(s)	221
AgsI	TTSAA	9 cut(s)	29, 253, 323, 682, 876, 992, 1070, 1147, 1549
AjnI	CCWGG	1 cut(s)	1563
AjuI	GAANNNNNNNTTGG	2 cut(s)	1336, 1368
AleI	CACNNNNGTG	1 cut(s)	981
Alw21I	GWGCWC	2 cut(s)	193, 1284
Alw26I	GTCTC	4 cut(s)	69, 843, 1231, 1506
Alw44I	GTGCAC	1 cut(s)	189
AlwNI	CAGNNNCTG	1 cut(s)	74
Ama87I	CYCGRG	2 cut(s)	151, 1619
Aor13HI	TCCGGA	1 cut(s)	233
AoxI	GGCC	4 cut(s)	606, 1010, 1325, 1420
ApaI	GGGCCC	1 cut(s)	1014
ApaLI	GTGCAC	1 cut(s)	189
ApeKI	GCWGC	4 cut(s)	74, 1001, 1151, 1382
ApoI	RAATTY	1 cut(s)	1549
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
AspLEI	GCGC	2 cut(s)	1210, 1266
AspS9I	GGNCC	6 cut(s)	239, 952, 1010, 1011, 1325, 1421
AsuHPI	GGTGA	4 cut(s)	479, 1332, 1347, 1601
AvaI	CYCGRG	2 cut(s)	151, 1619
AvaII	GGWCC	2 cut(s)	239, 952
BaeGI	GKGCMC	4 cut(s)	15, 193, 270, 1014
BalI	TGGCCA	1 cut(s)	608
BanII	GRGCYC	1 cut(s)	1014
BarI	GAAGNNNNNNTAC	2 cut(s)	315, 347
BauI	CACGAG	1 cut(s)	672
BbsI	GAAGAC	2 cut(s)	719, 1425
Bbv12I	GWGCWC	2 cut(s)	193, 1284
BbvI	GCAGC	4 cut(s)	61, 988, 1163, 1394
BccI	CCATC	7 cut(s)	179, 437, 464, 787, 1207, 1316, 1366
BcgI	CGANNNNNNTGC	2 cut(s)	1407, 1441
BciT130I	CCWGG	1 cut(s)	1565
BciVI	GTATCC	1 cut(s)	1402
BcoDI	GTCTC	4 cut(s)	69, 843, 1231, 1506
BfaI	CTAG	3 cut(s)	162, 419, 516
BfmI	CTRYAG	1 cut(s)	378
BfoI	RGCGCY	1 cut(s)	1211
BfuAI	ACCTGC	2 cut(s)	403, 1145
BfuI	GTATCC	1 cut(s)	1402
BisI	GCNGC	6 cut(s)	75, 1002, 1112, 1152, 1211, 1383
BlsI	GCNGC	6 cut(s)	76, 1003, 1113, 1153, 1212, 1384
BmcAI	AGTACT	1 cut(s)	426
Bme1390I	CCNGG	1 cut(s)	1565
Bme18I	GGWCC	2 cut(s)	239, 952
BmeT110I	CYCGRG	2 cut(s)	151, 1619
BmgT120I	GGNCC	6 cut(s)	239, 952, 1010, 1011, 1325, 1421
BmiI	GGNNCC	5 cut(s)	954, 1011, 1012, 1138, 1423
BmrFI	CCNGG	1 cut(s)	1565
BmsI	GCATC	6 cut(s)	61, 699, 765, 1405, 1434, 1567
BpiI	GAAGAC	2 cut(s)	719, 1425
BpmI	CTGGAG	8 cut(s)	51, 716, 896, 1067, 1188, 1371, 1377, 1383
BpuEI	CTTGAG	1 cut(s)	1163
BsaJI	CCNNGG	1 cut(s)	1230
BsaWI	WCCGGW	1 cut(s)	233
BsaXI	ACNNNNNCTCC	6 cut(s)	512, 542, 1369, 1399, 1586, 1616
Bsc4I	CCNNNNNNNGG	1 cut(s)	221
Bse1I	ACTGG	5 cut(s)	358, 374, 870, 913, 1226
BseAI	TCCGGA	1 cut(s)	233
BseBI	CCWGG	1 cut(s)	1565
BseDI	CCNNGG	1 cut(s)	1230
BseGI	GGATG	4 cut(s)	304, 625, 1546, 1596
BseLI	CCNNNNNNNGG	1 cut(s)	221
BseMII	CTCAG	2 cut(s)	540, 1451
BseNI	ACTGG	5 cut(s)	358, 374, 870, 913, 1226
BseRI	GAGGAG	3 cut(s)	169, 405, 1511
BseSI	GKGCMC	4 cut(s)	15, 193, 270, 1014
BseXI	GCAGC	4 cut(s)	61, 988, 1163, 1394
BsgI	GTGCAG	1 cut(s)	749
Bsh1236I	CGCG	1 cut(s)	919
BshFI	GGCC	4 cut(s)	608, 1012, 1327, 1422
BsiHKAI	GWGCWC	2 cut(s)	193, 1284
BsiHKCI	CYCGRG	2 cut(s)	151, 1619
BsiSI	CCGG	1 cut(s)	234
BslFI	GGGAC	1 cut(s)	633
BslI	CCNNNNNNNGG	1 cut(s)	221
BsmAI	GTCTC	4 cut(s)	69, 843, 1231, 1506
BsmFI	GGGAC	1 cut(s)	633
BsmI	GAATGC	2 cut(s)	1153, 1458
BsnI	GGCC	4 cut(s)	608, 1012, 1327, 1422
BsoBI	CYCGRG	2 cut(s)	151, 1619
Bsp120I	GGGCCC	1 cut(s)	1010
Bsp1286I	GDGCHC	5 cut(s)	15, 193, 270, 1014, 1284
Bsp13I	TCCGGA	1 cut(s)	233
Bsp143I	GATC	2 cut(s)	117, 1495
BspACI	CCGC	7 cut(s)	106, 247, 344, 961, 1111, 1211, 1277
BspANI	GGCC	4 cut(s)	608, 1012, 1327, 1422
BspCNI	CTCAG	2 cut(s)	541, 1450
BspEI	TCCGGA	1 cut(s)	233
BspFNI	CGCG	1 cut(s)	919
BspLI	GGNNCC	5 cut(s)	954, 1011, 1012, 1138, 1423
BspMI	ACCTGC	2 cut(s)	403, 1145
BspQI	GCTCTTC	1 cut(s)	1284
BsrI	ACTGG	5 cut(s)	358, 374, 870, 913, 1226
BssECI	CCNNGG	1 cut(s)	1230
BssMI	GATC	2 cut(s)	117, 1495
BssSI	CACGAG	1 cut(s)	672
BssT1I	CCWWGG	1 cut(s)	1230
Bst2BI	CACGAG	1 cut(s)	672
Bst2UI	CCWGG	1 cut(s)	1565
Bst6I	CTCTTC	1 cut(s)	1284
BstC8I	GCNNGC	5 cut(s)	143, 375, 1268, 1420, 1487
BstDEI	CTNAG	3 cut(s)	549, 845, 1437
BstF5I	GGATG	4 cut(s)	304, 625, 1546, 1596
BstFNI	CGCG	1 cut(s)	919
BstH2I	RGCGCY	1 cut(s)	1211
BstHHI	GCGC	2 cut(s)	1210, 1266
BstKTI	GATC	2 cut(s)	120, 1498
BstMAI	GTCTC	4 cut(s)	69, 843, 1231, 1506
BstMBI	GATC	2 cut(s)	117, 1495
BstMWI	GCNNNNNNNGC	3 cut(s)	80, 1261, 1388
BstNI	CCWGG	1 cut(s)	1565
BstNSI	RCATGY	4 cut(s)	145, 509, 651, 899
BstSCI	CCNGG	1 cut(s)	1563
BstSFI	CTRYAG	1 cut(s)	378
BstSLI	GKGCMC	4 cut(s)	15, 193, 270, 1014
BstUI	CGCG	1 cut(s)	919
BstV1I	GCAGC	4 cut(s)	61, 988, 1163, 1394
BstV2I	GAAGAC	2 cut(s)	719, 1425
BsuI	GTATCC	1 cut(s)	1402
BsuRI	GGCC	4 cut(s)	608, 1012, 1327, 1422
BtsCI	GGATG	4 cut(s)	304, 625, 1546, 1596
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	5 cut(s)	367, 546, 609, 855, 863
BveI	ACCTGC	2 cut(s)	403, 1145
Cac8I	GCNNGC	5 cut(s)	143, 375, 1268, 1420, 1487
CaiI	CAGNNNCTG	1 cut(s)	74
CfoI	GCGC	2 cut(s)	1210, 1266
Cfr13I	GGNCC	6 cut(s)	239, 952, 1010, 1011, 1325, 1421
CseI	GACGC	2 cut(s)	134, 908
Csp6I	GTAC	3 cut(s)	389, 425, 1034
CviQI	GTAC	3 cut(s)	389, 425, 1034
DdeI	CTNAG	3 cut(s)	549, 845, 1437
DpnI	GATC	2 cut(s)	119, 1497
DpnII	GATC	2 cut(s)	117, 1495
DraI	TTTAAA	2 cut(s)	310, 586
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	1 cut(s)	1284
EarI	CTCTTC	1 cut(s)	1284
Eco130I	CCWWGG	1 cut(s)	1230
Eco24I	GRGCYC	1 cut(s)	1014
Eco47I	GGWCC	2 cut(s)	239, 952
Eco57I	CTGAAG	2 cut(s)	509, 1325
Eco88I	CYCGRG	2 cut(s)	151, 1619
EcoO109I	RGGNCCY	3 cut(s)	239, 1010, 1421
EcoRI	GAATTC	1 cut(s)	1549
EcoRII	CCWGG	1 cut(s)	1563
EcoT14I	CCWWGG	1 cut(s)	1230
EcoT22I	ATGCAT	3 cut(s)	143, 946, 1166
EcoT38I	GRGCYC	1 cut(s)	1014
ErhI	CCWWGG	1 cut(s)	1230
FalI	AAGNNNNNCTT	4 cut(s)	330, 362, 1529, 1561
FaqI	GGGAC	1 cut(s)	633
FblI	GTMKAC	1 cut(s)	1374
Fnu4HI	GCNGC	6 cut(s)	75, 1002, 1112, 1152, 1211, 1383
FokI	GGATG	4 cut(s)	311, 612, 1553, 1583
FriOI	GRGCYC	1 cut(s)	1014
Fsp4HI	GCNGC	6 cut(s)	75, 1002, 1112, 1152, 1211, 1383
FspBI	CTAG	3 cut(s)	162, 419, 516
GlaI	GCGC	2 cut(s)	1209, 1265
GluI	GCNGC	6 cut(s)	75, 1002, 1112, 1152, 1211, 1383
GsuI	CTGGAG	8 cut(s)	51, 716, 896, 1067, 1188, 1371, 1377, 1383
HaeII	RGCGCY	1 cut(s)	1211
HaeIII	GGCC	4 cut(s)	608, 1012, 1327, 1422
HapII	CCGG	1 cut(s)	234
HgaI	GACGC	2 cut(s)	134, 908
HhaI	GCGC	2 cut(s)	1210, 1266
Hin6I	GCGC	2 cut(s)	1208, 1264
HinP1I	GCGC	2 cut(s)	1208, 1264
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HinfI	GANTC	7 cut(s)	51, 614, 724, 736, 970, 1049, 1239
HpaII	CCGG	1 cut(s)	234
HphI	GGTGA	4 cut(s)	479, 1332, 1347, 1601
Hpy166II	GTNNAC	3 cut(s)	191, 484, 1375
Hpy188I	TCNGA	4 cut(s)	442, 571, 723, 1440
Hpy8I	GTNNAC	3 cut(s)	191, 484, 1375
Hpy99I	CGWCG	2 cut(s)	182, 1432
HpyAV	CCTTC	4 cut(s)	377, 1037, 1531, 1615
HpyCH4IV	ACGT	1 cut(s)	180
HpyF10VI	GCNNNNNNNGC	3 cut(s)	80, 1261, 1388
HpyF3I	CTNAG	3 cut(s)	549, 845, 1437
HpySE526I	ACGT	1 cut(s)	180
HspAI	GCGC	2 cut(s)	1208, 1264
Kpn2I	TCCGGA	1 cut(s)	233
Kzo9I	GATC	2 cut(s)	117, 1495
LguI	GCTCTTC	1 cut(s)	1284
LmnI	GCTCC	9 cut(s)	331, 418, 520, 1136, 1279, 1390, 1396, 1402, 1621
Lsp1109I	GCAGC	4 cut(s)	61, 988, 1163, 1394
LweI	GCATC	6 cut(s)	61, 699, 765, 1405, 1434, 1567
MaeI	CTAG	3 cut(s)	162, 419, 516
MaeII	ACGT	1 cut(s)	180
MaeIII	GTNAC	4 cut(s)	146, 365, 787, 1338
MalI	GATC	2 cut(s)	119, 1497
MboI	GATC	2 cut(s)	117, 1495
MboII	GAAGA	7 cut(s)	719, 1073, 1301, 1318, 1344, 1425, 1453
MfeI	CAATTG	1 cut(s)	770
MhlI	GDGCHC	5 cut(s)	15, 193, 270, 1014, 1284
MlsI	TGGCCA	1 cut(s)	608
MluCI	AATT	8 cut(s)	33, 357, 399, 491, 770, 987, 1311, 1549
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	4 cut(s)	733, 964, 1058, 1233
Mox20I	TGGCCA	1 cut(s)	608
Mph1103I	ATGCAT	3 cut(s)	143, 946, 1166
MroI	TCCGGA	1 cut(s)	233
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	5 cut(s)	135, 309, 489, 501, 585
MslI	CAYNNNNRTG	1 cut(s)	981
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	1 cut(s)	173
MspI	CCGG	1 cut(s)	234
MspR9I	CCNGG	1 cut(s)	1565
MunI	CAATTG	1 cut(s)	770
Mva1269I	GAATGC	2 cut(s)	1153, 1458
MvaI	CCWGG	1 cut(s)	1565
MvnI	CGCG	1 cut(s)	919
MwoI	GCNNNNNNNGC	3 cut(s)	80, 1261, 1388
NdeII	GATC	2 cut(s)	117, 1495
NlaIV	GGNNCC	5 cut(s)	954, 1011, 1012, 1138, 1423
NmuCI	GTSAC	4 cut(s)	146, 365, 787, 1338
NsiI	ATGCAT	3 cut(s)	143, 946, 1166
NspI	RCATGY	4 cut(s)	145, 509, 651, 899
OliI	CACNNNNGTG	1 cut(s)	981
PaeI	GCATGC	1 cut(s)	145
PaeR7I	CTCGAG	1 cut(s)	151
PciSI	GCTCTTC	1 cut(s)	1284
PcsI	WCGNNNNNNNCGW	1 cut(s)	923
PctI	GAATGC	2 cut(s)	1153, 1458
PfeI	GAWTC	3 cut(s)	51, 614, 736
PflMI	CCANNNNNTGG	1 cut(s)	221
PkrI	GCNGC	6 cut(s)	76, 1003, 1113, 1153, 1212, 1384
PleI	GAGTC	4 cut(s)	732, 964, 1057, 1233
PpsI	GAGTC	4 cut(s)	732, 964, 1057, 1233
PpuMI	RGGWCCY	1 cut(s)	239
Psp5II	RGGWCCY	1 cut(s)	239
Psp6I	CCWGG	1 cut(s)	1563
PspGI	CCWGG	1 cut(s)	1563
PspN4I	GGNNCC	5 cut(s)	954, 1011, 1012, 1138, 1423
PspOMI	GGGCCC	1 cut(s)	1010
PspPI	GGNCC	6 cut(s)	239, 952, 1010, 1011, 1325, 1421
PspPPI	RGGWCCY	1 cut(s)	239
PspXI	VCTCGAGB	1 cut(s)	151
PstNI	CAGNNNCTG	1 cut(s)	74
PvuII	CAGCTG	1 cut(s)	173
RsaI	GTAC	3 cut(s)	390, 426, 1035
RsaNI	GTAC	3 cut(s)	389, 425, 1034
RseI	CAYNNNNRTG	1 cut(s)	981
SapI	GCTCTTC	1 cut(s)	1284
SaqAI	TTAA	5 cut(s)	135, 309, 489, 501, 585
SatI	GCNGC	6 cut(s)	75, 1002, 1112, 1152, 1211, 1383
Sau3AI	GATC	2 cut(s)	117, 1495
Sau96I	GGNCC	6 cut(s)	239, 952, 1010, 1011, 1325, 1421
ScaI	AGTACT	1 cut(s)	426
SchI	GAGTC	4 cut(s)	733, 964, 1058, 1233
ScrFI	CCNGG	1 cut(s)	1565
SduI	GDGCHC	5 cut(s)	15, 193, 270, 1014, 1284
SfaNI	GCATC	6 cut(s)	61, 699, 765, 1405, 1434, 1567
SfcI	CTRYAG	1 cut(s)	378
Sfr274I	CTCGAG	1 cut(s)	151
SinI	GGWCC	2 cut(s)	239, 952
SlaI	CTCGAG	1 cut(s)	151
SmiMI	CAYNNNNRTG	1 cut(s)	981
SmlI	CTYRAG	2 cut(s)	151, 1178
SmoI	CTYRAG	2 cut(s)	151, 1178
SphI	GCATGC	1 cut(s)	145
Sse9I	AATT	8 cut(s)	33, 357, 399, 491, 770, 987, 1311, 1549
SsiI	CCGC	7 cut(s)	106, 247, 344, 961, 1111, 1211, 1277
SspMI	CTAG	3 cut(s)	162, 419, 516
StyD4I	CCNGG	1 cut(s)	1563
StyI	CCWWGG	1 cut(s)	1230
TaiI	ACGT	1 cut(s)	183
TaqI	TCGA	2 cut(s)	99, 152
TasI	AATT	8 cut(s)	33, 357, 399, 491, 770, 987, 1311, 1549
TatI	WGTACW	2 cut(s)	424, 1033
TauI	GCSGC	2 cut(s)	1114, 1213
TfiI	GAWTC	3 cut(s)	51, 614, 736
Tru1I	TTAA	5 cut(s)	135, 309, 489, 501, 585
Tru9I	TTAA	5 cut(s)	135, 309, 489, 501, 585
TscAI	CASTG	5 cut(s)	374, 553, 616, 862, 870
TseFI	GTSAC	4 cut(s)	146, 365, 787, 1338
TseI	GCWGC	4 cut(s)	74, 1001, 1151, 1382
Tsp45I	GTSAC	4 cut(s)	146, 365, 787, 1338
TspDTI	ATGAA	5 cut(s)	471, 614, 1121, 1131, 1560
TspGWI	ACGGA	2 cut(s)	101, 1346
TspRI	CASTG	5 cut(s)	374, 553, 616, 862, 870
Van91I	CCANNNNNTGG	1 cut(s)	221
VneI	GTGCAC	1 cut(s)	189
VpaK11BI	GGWCC	2 cut(s)	239, 952
XapI	RAATTY	1 cut(s)	1549
XbaI	TCTAGA	1 cut(s)	418
XceI	RCATGY	4 cut(s)	145, 509, 651, 899
XhoI	CTCGAG	1 cut(s)	151
XmiI	GTMKAC	1 cut(s)	1374
XspI	CTAG	3 cut(s)	162, 419, 516
ZrmI	AGTACT	1 cut(s)	426
Zsp2I	ATGCAT	3 cut(s)	143, 946, 1166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.