FvH4_3g28430

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001189
Physical Location & Seq
Reverse (-)
21383362 .. 21388694
5333 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28430.t1

Sequence Viewer

Length: 1845 bp
ATGGATTCATACGAGGCTACCAAGATCGTTTTCTCGAGAATCCAGAACTTGGATTCTGAAAATGCGTCGAAAATCATGGGGTACCTTTTGATTCAGGACCAGAGTGAGAAGGAGATGATACGCTTGGCATTTGGACCAGAGACTCTGCTTCACAATCTCATCATCAATGCCAAAACCCAACTGGGTCTTGTTCATTCCAAGACTCCATCCTTCAACCCCATTTCCAGGCCCAACCCACTTTCCCTTTCATCTTCTCCAACCTCGAATCTTTGGAGCCTCAGCAACCCCATTAGTCCCAGCTCCACTTGTTCCCCTTCTTATGCCAATGTTGTTAGCAAAAGCACTAACCTAGCTTCTGGGTCTTTATCGCCATCCATCAATGACTCTTCTAGTGCCACTGAGCTTGTTGACAACTTCCAGTTTTCTTTCCTCAATGATCCGAGGACCGAGGAGGAGTTTTTCGATGGAGGCCTTGAAGGTGTTTATGGTACGAACTCCATGAACAAGCAAAGCCACTCTGCTCACTGTGAGTGTGCTTTTGGTTCTGAAGATGTGAATTCCGGGCTGGGATGGAAGCCCTGCTCGTATTTTGCAAGAGGGTTTTGTAAAAATGGAAATAGTTGCCGTTTTCTCCACGGTGATGGTTTTCCTGGAAATGTCGGTATGCTTGAGCAGTGTGAAGACTTGCTCAGATCCAATGCTGCTGCTCAGCAACACAAACTTGCTGCAGTCTCTCAGTTCATGTCTAATGGTTCTTCTTTGCCTTACAACAAGTGCCTCAACTTTCTGATGCAGCAACAACAAAATGACGCACAAAGGTCATTGATGATGGGAGAAGAGCTTCACAAGTTTGGGAGATACCAGCATGAGAGAAATGATATTTCGAGTTTGGGTGGAAATGTAATTCCCAGTTCAAGGCAGATCTACTTGACATTCCCAGCTGATAGTACATTTAGAGAAGAAGATGTATCTAATTATTTCAACATGTTTGGACCCGTGCAAGATGTGAGGATTCCATACCAGCAGAAGAGAATGTTTGGGTTTGTTACATTTGTATATTCGGAAACTGTGAGGATCATTTTGGCCAAAGGGAACCCTCATTTTGTATGTGATTCTCGGGTGCTTGTCAAGCCTTATAAGGAGAAGGGGAAAATACCAGACAAGAAGCTACACCAACATTTGGAGAGGGGGGACTATTCTCTGTGTTCAAGCGTATCCGGAGTTGACTCTAGGGAGCCATATGACTTTAATCTTGGATCAAGAATGTATTACAGTACCCAAGAGATGATGTTACGAAGGAAATTAGAGGACCAAGCTAATTTGGAGCATGCTATTGAACTCCAAGAAAGAAGACTTGTGAACATGCATCTTCTAGGCATCAAGAATAACAATCATCATCAATACTATCAAGGTCAATCAGAAGGGTCTCCATTTCCCTCCCCAACTTTATCACTGACACCTAAAAATCAACCCTTCACAGATGTCTCAGAAGTCTCGATCATTTCCCAAACTTATGCTTTAGATGGTGAACAACAAGAGGAGAAGAGTGGCAAGAACCAATCCAATGCTGAAGAGTGTGACCTCCATCAAAGTGTGGAGCACAATCTCCCGGAGAACCTGTTTGCTTCACCAGCAGTAGCTGGAGACCACATTAATGTCTTCTCAACTGCTTCCGCACAATTCAATGATAGCGCCTCAGCAATATCTTCATCTTCCAATAGCAATAGCAATAATAACAATTTACTGCCAACCACTTCTGCTTCTACCTCCAATGCAACTTCCCCAAAATCTGTTCTCTCCAGCCCAGGTTTTCTTTTGGGTATGGAACCACTGGAATGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 zf-CCCH

Protein Analysis

615

Amino Acids

68.02

Weight (kDa)

5.6

Isoelectric Point (pI)

56.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 65 5.9e-34 AtC3H46 PABC domain
zf-CCCH PF00642 193 - 213 7.1e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1137
Acc65I GGTACC 1 cut(s) 81
AccB1I GGYRCC 1 cut(s) 81
AccB7I CCANNNNNTGG 2 cut(s) 49, 1180
AccIII TCCGGA 1 cut(s) 1217
AciI CCGC 1 cut(s) 1674
AclWI GGATC 4 cut(s) 431, 687, 1082, 1264
AcoI YGGCCR 1 cut(s) 1083
AcsI RAATTY 1 cut(s) 556
AcuI CTGAAG 2 cut(s) 567, 1590
AfaI GTAC 4 cut(s) 83, 490, 949, 1276
AfiI CCNNNNNNNGG 4 cut(s) 49, 225, 915, 1180
AflIII ACRYGT 1 cut(s) 984
AgsI TTSAA 7 cut(s) 214, 476, 915, 982, 1209, 1337, 1684
AjnI CCWGG 3 cut(s) 224, 649, 1804
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AluBI AGCT 8 cut(s) 300, 353, 403, 841, 941, 1168, 1316, 1640
AluI AGCT 8 cut(s) 300, 353, 403, 841, 941, 1168, 1316, 1640
Alw21I GWGCWC 1 cut(s) 1602
Alw26I GTCTC 6 cut(s) 134, 736, 1431, 1489, 1498, 1638
AlwI GGATC 4 cut(s) 431, 687, 1082, 1264
AlwNI CAGNNNCTG 1 cut(s) 1640
Ama87I CYCGRG 2 cut(s) 34, 1116
Aor13HI TCCGGA 1 cut(s) 1217
AoxI GGCC 3 cut(s) 227, 469, 1083
ApeKI GCWGC 4 cut(s) 701, 704, 725, 793
ApoI RAATTY 1 cut(s) 556
AseI ATTAAT 1 cut(s) 1653
Asp700I GAANNNNTTC 1 cut(s) 840
Asp718I GGTACC 1 cut(s) 81
AspLEI GCGC 1 cut(s) 1694
AspS9I GGNCC 6 cut(s) 97, 134, 228, 444, 992, 1309
AsuC2I CCSGG 2 cut(s) 562, 1610
AsuHPI GGTGA 3 cut(s) 650, 1538, 1620
AvaI CYCGRG 2 cut(s) 34, 1116
AvaII GGWCC 5 cut(s) 97, 134, 444, 992, 1309
BalI TGGCCA 1 cut(s) 1085
BanI GGYRCC 1 cut(s) 81
BbsI GAAGAC 3 cut(s) 687, 1357, 1651
Bbv12I GWGCWC 1 cut(s) 1602
BbvCI CCTCAGC 2 cut(s) 278, 1696
BbvI GCAGC 4 cut(s) 688, 691, 712, 805
BccI CCATC 9 cut(s) 214, 379, 383, 458, 564, 635, 823, 1517, 1593
BceAI ACGGC 1 cut(s) 609
BciT130I CCWGG 3 cut(s) 226, 651, 1806
BciVI GTATCC 1 cut(s) 1225
BcnI CCSGG 2 cut(s) 562, 1610
BcoDI GTCTC 6 cut(s) 134, 736, 1431, 1489, 1498, 1638
BfaI CTAG 4 cut(s) 350, 390, 1230, 1373
BfmI CTRYAG 1 cut(s) 726
BfoI RGCGCY 1 cut(s) 1695
BfuI GTATCC 1 cut(s) 1225
BglII AGATCT 1 cut(s) 921
BisI GCNGC 4 cut(s) 702, 705, 726, 794
BlpI GCTNAGC 1 cut(s) 708
BlsI GCNGC 4 cut(s) 703, 706, 727, 795
Bme1390I CCNGG 5 cut(s) 226, 562, 651, 1610, 1806
Bme18I GGWCC 5 cut(s) 97, 134, 444, 992, 1309
BmeT110I CYCGRG 2 cut(s) 34, 1116
BmgT120I GGNCC 6 cut(s) 97, 134, 228, 444, 992, 1309
BmiI GGNNCC 6 cut(s) 83, 275, 994, 1094, 1236, 1827
BmrFI CCNGG 5 cut(s) 226, 562, 651, 1610, 1806
BmrI ACTGGG 2 cut(s) 191, 903
BmsI GCATC 3 cut(s) 780, 1375, 1386
BmuI ACTGGG 2 cut(s) 191, 903
BpiI GAAGAC 3 cut(s) 687, 1357, 1651
BpmI CTGGAG 2 cut(s) 1662, 1783
Bpu10I CCTNAGC 2 cut(s) 278, 1696
Bpu1102I GCTNAGC 1 cut(s) 708
BpuEI CTTGAG 1 cut(s) 689
BpuMI CCSGG 2 cut(s) 562, 1610
BsaI GGTCTC 2 cut(s) 1431, 1638
BsaJI CCNNGG 4 cut(s) 440, 447, 634, 1804
BsaWI WCCGGW 1 cut(s) 1217
BsaXI ACNNNNNCTCC 2 cut(s) 1604, 1634
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 225, 915, 1180
Bse1I ACTGG 4 cut(s) 186, 418, 909, 1836
BseAI TCCGGA 1 cut(s) 1217
BseBI CCWGG 3 cut(s) 226, 651, 1806
BseDI CCNNGG 4 cut(s) 440, 447, 634, 1804
BseGI GGATG 3 cut(s) 206, 371, 575
BseLI CCNNNNNNNGG 4 cut(s) 49, 225, 915, 1180
BseMII CTCAG 7 cut(s) 292, 390, 703, 722, 749, 1500, 1710
BseNI ACTGG 4 cut(s) 186, 418, 909, 1836
BseRI GAGGAG 3 cut(s) 464, 467, 1553
BseXI GCAGC 4 cut(s) 688, 691, 712, 805
BseYI CCCAGC 3 cut(s) 296, 565, 937
BshFI GGCC 3 cut(s) 229, 471, 1085
BshNI GGYRCC 1 cut(s) 81
BsiHKAI GWGCWC 1 cut(s) 1602
BsiHKCI CYCGRG 2 cut(s) 34, 1116
BsiSI CCGG 3 cut(s) 561, 1218, 1610
BslFI GGGAC 2 cut(s) 279, 1205
BslI CCNNNNNNNGG 4 cut(s) 49, 225, 915, 1180
BsmAI GTCTC 6 cut(s) 134, 736, 1431, 1489, 1498, 1638
BsmFI GGGAC 2 cut(s) 279, 1205
BsmI GAATGC 1 cut(s) 1841
BsnI GGCC 3 cut(s) 229, 471, 1085
Bso31I GGTCTC 2 cut(s) 1431, 1638
BsoBI CYCGRG 2 cut(s) 34, 1116
Bsp1286I GDGCHC 1 cut(s) 1602
Bsp13I TCCGGA 1 cut(s) 1217
Bsp143I GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
Bsp1720I GCTNAGC 1 cut(s) 708
BspACI CCGC 1 cut(s) 1674
BspANI GGCC 3 cut(s) 229, 471, 1085
BspCNI CTCAG 7 cut(s) 291, 391, 702, 721, 748, 1499, 1709
BspEI TCCGGA 1 cut(s) 1217
BspLI GGNNCC 6 cut(s) 83, 275, 994, 1094, 1236, 1827
BspMAI CTGCAG 1 cut(s) 730
BspPI GGATC 4 cut(s) 431, 687, 1082, 1264
BspQI GCTCTTC 1 cut(s) 831
BspT107I GGYRCC 1 cut(s) 81
BspTNI GGTCTC 2 cut(s) 1431, 1638
BsrI ACTGG 4 cut(s) 186, 418, 909, 1836
BssECI CCNNGG 4 cut(s) 440, 447, 634, 1804
BssMI GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
Bst2UI CCWGG 3 cut(s) 226, 651, 1806
Bst4CI ACNGT 4 cut(s) 527, 638, 1069, 1274
Bst6I CTCTTC 5 cut(s) 391, 831, 1022, 1538, 1566
BstC8I GCNNGC 1 cut(s) 1329
BstDEI CTNAG 7 cut(s) 278, 399, 689, 708, 735, 1486, 1696
BstDSI CCRYGG 1 cut(s) 634
BstF5I GGATG 3 cut(s) 206, 371, 575
BstH2I RGCGCY 1 cut(s) 1695
BstHHI GCGC 1 cut(s) 1694
BstKTI GATC 7 cut(s) 27, 439, 695, 924, 1077, 1259, 1500
BstMAI GTCTC 6 cut(s) 134, 736, 1431, 1489, 1498, 1638
BstMBI GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
BstMWI GCNNNNNNNGC 2 cut(s) 1129, 1631
BstNI CCWGG 3 cut(s) 226, 651, 1806
BstNSI RCATGY 3 cut(s) 988, 1331, 1366
BstSCI CCNGG 5 cut(s) 224, 560, 649, 1608, 1804
BstSFI CTRYAG 1 cut(s) 726
BstV1I GCAGC 4 cut(s) 688, 691, 712, 805
BstV2I GAAGAC 3 cut(s) 687, 1357, 1651
BstX2I RGATCY 2 cut(s) 692, 921
BstXI CCANNNNNNTGG 1 cut(s) 641
BstYI RGATCY 2 cut(s) 692, 921
BsuI GTATCC 1 cut(s) 1225
BsuRI GGCC 3 cut(s) 229, 471, 1085
BtgI CCRYGG 1 cut(s) 634
BtsCI GGATG 3 cut(s) 206, 371, 575
BtsI GCAGTG 1 cut(s) 680
BtsIMutI CAGTG 5 cut(s) 396, 523, 680, 1451, 1829
Cac8I GCNNGC 1 cut(s) 1329
CaiI CAGNNNCTG 1 cut(s) 1640
CfoI GCGC 1 cut(s) 1694
Cfr13I GGNCC 6 cut(s) 97, 134, 228, 444, 992, 1309
CseI GACGC 2 cut(s) 54, 818
Csp6I GTAC 4 cut(s) 82, 489, 948, 1275
CspCI CAANNNNNGTGG 2 cut(s) 385, 420
CviAII CATG 7 cut(s) 76, 499, 742, 866, 985, 1328, 1363
CviQI GTAC 4 cut(s) 82, 489, 948, 1275
DdeI CTNAG 7 cut(s) 278, 399, 689, 708, 735, 1486, 1696
DpnI GATC 7 cut(s) 26, 438, 694, 923, 1076, 1258, 1499
DpnII GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
EaeI YGGCCR 1 cut(s) 1083
Eam1104I CTCTTC 5 cut(s) 391, 831, 1022, 1538, 1566
EarI CTCTTC 5 cut(s) 391, 831, 1022, 1538, 1566
Eco147I AGGCCT 1 cut(s) 471
Eco31I GGTCTC 2 cut(s) 1431, 1638
Eco47I GGWCC 5 cut(s) 97, 134, 444, 992, 1309
Eco57I CTGAAG 2 cut(s) 567, 1590
Eco88I CYCGRG 2 cut(s) 34, 1116
EcoRI GAATTC 1 cut(s) 556
EcoRII CCWGG 3 cut(s) 224, 649, 1804
EcoT22I ATGCAT 1 cut(s) 1368
FaeI CATG 7 cut(s) 79, 502, 745, 869, 988, 1331, 1366
FaqI GGGAC 2 cut(s) 279, 1205
FatI CATG 7 cut(s) 75, 498, 741, 865, 984, 1327, 1362
FauNDI CATATG 1 cut(s) 1240
Fnu4HI GCNGC 4 cut(s) 702, 705, 726, 794
FokI GGATG 3 cut(s) 193, 358, 582
Fsp4HI GCNGC 4 cut(s) 702, 705, 726, 794
FspBI CTAG 4 cut(s) 350, 390, 1230, 1373
GlaI GCGC 1 cut(s) 1693
GluI GCNGC 4 cut(s) 702, 705, 726, 794
GsaI CCCAGC 3 cut(s) 300, 569, 941
GsuI CTGGAG 2 cut(s) 1662, 1783
HaeII RGCGCY 1 cut(s) 1695
HaeIII GGCC 3 cut(s) 229, 471, 1085
HapII CCGG 3 cut(s) 561, 1218, 1610
HgaI GACGC 2 cut(s) 54, 818
HhaI GCGC 1 cut(s) 1694
Hin1II CATG 7 cut(s) 79, 502, 745, 869, 988, 1331, 1366
Hin6I GCGC 1 cut(s) 1692
HinP1I GCGC 1 cut(s) 1692
HincII GTYRAC 2 cut(s) 409, 1225
HindII GTYRAC 2 cut(s) 409, 1225
HpaII CCGG 3 cut(s) 561, 1218, 1610
HphI GGTGA 3 cut(s) 650, 1538, 1620
Hpy166II GTNNAC 4 cut(s) 409, 1225, 1360, 1529
Hpy188I TCNGA 8 cut(s) 58, 441, 547, 692, 789, 1063, 1420, 1489
Hpy188III TCNNGA 8 cut(s) 34, 36, 43, 95, 1218, 1260, 1381, 1495
Hpy8I GTNNAC 4 cut(s) 409, 1225, 1360, 1529
Hpy99I CGWCG 1 cut(s) 70
HpyAV CCTTC 8 cut(s) 103, 220, 324, 470, 1138, 1290, 1415, 1483
HpyCH4III ACNGT 4 cut(s) 527, 638, 1069, 1274
HpyCH4V TGCA 7 cut(s) 593, 728, 793, 1000, 1366, 1775, 1839
HpyF10VI GCNNNNNNNGC 2 cut(s) 1129, 1631
HpyF3I CTNAG 7 cut(s) 278, 399, 689, 708, 735, 1486, 1696
Hsp92II CATG 7 cut(s) 79, 502, 745, 869, 988, 1331, 1366
HspAI GCGC 1 cut(s) 1692
Kpn2I TCCGGA 1 cut(s) 1217
KpnI GGTACC 1 cut(s) 85
Kzo9I GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
LguI GCTCTTC 1 cut(s) 831
LmnI GCTCC 5 cut(s) 273, 305, 1234, 1324, 1597
Lsp1109I GCAGC 4 cut(s) 688, 691, 712, 805
LweI GCATC 3 cut(s) 780, 1375, 1386
MaeI CTAG 4 cut(s) 350, 390, 1230, 1373
MaeIII GTNAC 3 cut(s) 1045, 1290, 1577
MalI GATC 7 cut(s) 26, 438, 694, 923, 1076, 1258, 1499
MboI GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
MflI RGATCY 2 cut(s) 692, 921
MhlI GDGCHC 1 cut(s) 1602
MlsI TGGCCA 1 cut(s) 1085
MluCI AATT 7 cut(s) 556, 903, 973, 1301, 1318, 1679, 1738
MluNI TGGCCA 1 cut(s) 1085
MlyI GAGTC 4 cut(s) 136, 196, 377, 1220
MmeI TCCRAC 1 cut(s) 281
Mox20I TGGCCA 1 cut(s) 1085
Mph1103I ATGCAT 1 cut(s) 1368
MroI TCCGGA 1 cut(s) 1217
MroXI GAANNNNTTC 1 cut(s) 840
MscI TGGCCA 1 cut(s) 1085
MseI TTAA 2 cut(s) 1248, 1653
MslI CAYNNNNRTG 4 cut(s) 639, 1590, 1653, 1834
Msp20I TGGCCA 1 cut(s) 1085
MspA1I CMGCKG 1 cut(s) 941
MspI CCGG 3 cut(s) 561, 1218, 1610
MspR9I CCNGG 5 cut(s) 226, 562, 651, 1610, 1806
Mva1269I GAATGC 1 cut(s) 1841
MvaI CCWGG 3 cut(s) 226, 651, 1806
MwoI GCNNNNNNNGC 2 cut(s) 1129, 1631
NciI CCSGG 2 cut(s) 562, 1610
NdeI CATATG 1 cut(s) 1240
NdeII GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
NlaIII CATG 7 cut(s) 79, 502, 745, 869, 988, 1331, 1366
NlaIV GGNNCC 6 cut(s) 83, 275, 994, 1094, 1236, 1827
NmuCI GTSAC 1 cut(s) 1577
NsiI ATGCAT 1 cut(s) 1368
NspI RCATGY 3 cut(s) 988, 1331, 1366
PaeI GCATGC 1 cut(s) 1331
PaeR7I CTCGAG 1 cut(s) 34
PceI AGGCCT 1 cut(s) 471
PciI ACATGT 1 cut(s) 984
PciSI GCTCTTC 1 cut(s) 831
PctI GAATGC 1 cut(s) 1841
PdmI GAANNNNTTC 1 cut(s) 840
PfeI GAWTC 7 cut(s) 5, 39, 53, 91, 265, 1012, 1112
PflMI CCANNNNNTGG 2 cut(s) 49, 1180
PfoI TCCNGGA 2 cut(s) 649, 1608
PkrI GCNGC 4 cut(s) 703, 706, 727, 795
PleI GAGTC 4 cut(s) 136, 196, 377, 1220
PpsI GAGTC 4 cut(s) 136, 196, 377, 1220
PscI ACATGT 1 cut(s) 984
PshBI ATTAAT 1 cut(s) 1653
PsiI TTATAA 1 cut(s) 1137
Psp6I CCWGG 3 cut(s) 224, 649, 1804
PspFI CCCAGC 3 cut(s) 296, 565, 937
PspGI CCWGG 3 cut(s) 224, 649, 1804
PspN4I GGNNCC 6 cut(s) 83, 275, 994, 1094, 1236, 1827
PspPI GGNCC 6 cut(s) 97, 134, 228, 444, 992, 1309
PstI CTGCAG 1 cut(s) 730
PstNI CAGNNNCTG 1 cut(s) 1640
PsuI RGATCY 2 cut(s) 692, 921
PvuII CAGCTG 1 cut(s) 941
RsaI GTAC 4 cut(s) 83, 490, 949, 1276
RsaNI GTAC 4 cut(s) 82, 489, 948, 1275
RseI CAYNNNNRTG 4 cut(s) 639, 1590, 1653, 1834
SapI GCTCTTC 1 cut(s) 831
SaqAI TTAA 2 cut(s) 1248, 1653
SatI GCNGC 4 cut(s) 702, 705, 726, 794
Sau3AI GATC 7 cut(s) 24, 436, 692, 921, 1074, 1256, 1497
Sau96I GGNCC 6 cut(s) 97, 134, 228, 444, 992, 1309
SchI GAGTC 4 cut(s) 136, 196, 377, 1220
ScrFI CCNGG 5 cut(s) 226, 562, 651, 1610, 1806
SduI GDGCHC 1 cut(s) 1602
SfaNI GCATC 3 cut(s) 780, 1375, 1386
SfcI CTRYAG 1 cut(s) 726
Sfr274I CTCGAG 1 cut(s) 34
SinI GGWCC 5 cut(s) 97, 134, 444, 992, 1309
SlaI CTCGAG 1 cut(s) 34
SmiMI CAYNNNNRTG 4 cut(s) 639, 1590, 1653, 1834
SmlI CTYRAG 2 cut(s) 34, 668
SmoI CTYRAG 2 cut(s) 34, 668
SphI GCATGC 1 cut(s) 1331
Sse9I AATT 7 cut(s) 556, 903, 973, 1301, 1318, 1679, 1738
SseBI AGGCCT 1 cut(s) 471
SsiI CCGC 1 cut(s) 1674
SspMI CTAG 4 cut(s) 350, 390, 1230, 1373
StuI AGGCCT 1 cut(s) 471
StyD4I CCNGG 5 cut(s) 224, 560, 649, 1608, 1804
TaaI ACNGT 4 cut(s) 527, 638, 1069, 1274
TaqI TCGA 6 cut(s) 35, 68, 263, 462, 884, 1496
TaqII GACCGA 1 cut(s) 461
TasI AATT 7 cut(s) 556, 903, 973, 1301, 1318, 1679, 1738
TatI WGTACW 1 cut(s) 947
TfiI GAWTC 7 cut(s) 5, 39, 53, 91, 265, 1012, 1112
Tru1I TTAA 2 cut(s) 1248, 1653
Tru9I TTAA 2 cut(s) 1248, 1653
TscAI CASTG 5 cut(s) 403, 530, 680, 1458, 1836
TseFI GTSAC 1 cut(s) 1577
TseI GCWGC 4 cut(s) 701, 704, 725, 793
Tsp45I GTSAC 1 cut(s) 1577
TspDTI ATGAA 5 cut(s) 182, 237, 515, 730, 1698
TspRI CASTG 5 cut(s) 403, 530, 680, 1458, 1836
Van91I CCANNNNNTGG 2 cut(s) 49, 1180
VpaK11BI GGWCC 5 cut(s) 97, 134, 444, 992, 1309
VspI ATTAAT 1 cut(s) 1653
XapI RAATTY 1 cut(s) 556
XceI RCATGY 3 cut(s) 988, 1331, 1366
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XhoI CTCGAG 1 cut(s) 34
XmnI GAANNNNTTC 1 cut(s) 840
XspI CTAG 4 cut(s) 350, 390, 1230, 1373
Zsp2I ATGCAT 1 cut(s) 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.