RLG00000030513

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001189
Physical Location & Seq
Reverse (-)
62708658 .. 62712069
3412 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030513

Sequence Viewer

Length: 2253 bp
ATGGGAATAAGAGAGGAGAAAGAAAGACACTCATCATCTCTCCACTCATCACAAGTTGTTTTGCACCAACCCACAGCCATGGATTCCTATGAAGCTACAAGGATTGTGTTCACAAGGATCACAAACTTGGACCCAGAAAATGCTTCCAAAATCATGGGTCTTCTTCTAATCCAAGACCATGGAGAGAAGGAGATGATACGATTAGCTTTCGGCCCCGAGGCGTTTCTCCACTCTGTGATTCTCAAGGCTCGGAAGGACTTGGGACTAATGCCCATATCCAACTCTCCATCCACACCCACCACACCTTCCTCTCCTTCGCCTTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAAAACTCTGCTTCCTCAAGGCTATCTCTCACTATACCAAACCCATCTTCTTCGGCTTCTACTTGGGCTGCTCTGTCTTCCGAGCTTCGAAACCAAGACGAGAGTATGATGATGAGTCCCAGCAACATGGCTCCTAACGTGTCTTCTTCTTCTTCATCTTCCACGATGAATTCATCTCTGCCCTTTTTCGGAAACGGTGGACCCGACCATGTGCTTGAGGAGTTTCAGCTTCAGGAGCAGCTCTCTTTTCTCAACGATGGAGCTCCTAAATCCCCTGATTTCTTTTACCCCCAGTCAGACTTGTCTTCCAGCCCAACTAATGGTTCTGATCAGACCCTTTTCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTAACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCTGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATCGGGGACTTGGGTTCAGATGGTGCTCCACTTGTTGGTTCACCAAGCAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCTAAGTGCATGAACTTCCTTCTTCAGCAGCAACAAACTGATGCCCAGAGGGCTGCCGCAGCCTTGATGATGGGTGATGATATCCACAAATTTAGTCGATCTCCTCGGATGGAAAGGAACGAGTTTCCAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCAAATTACTTCAGCATTTATGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCATATTTTGGCGAAAGGGAACCCTCATTTTGTGTGTGATGCTCGAGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGTACACCTACTGGCCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGATGTTTTACAACTCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCTGAGCTTCAGCAAGCACTCGAACTTCAAAGCCGAAGGCTAATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCTAGCAGTCCGATTAATTCTCCTACTCAGTCCCCCAGTATGTTCAATCAGAACTTTGTGCATCCTTCATTTCATAACCCAGAAGTTACTCAAGAGAACTGCTCTAGTCCAGTGCCAGCCATTTCTTCAGCTCTCTCAGCAGACCAGCAGCCTCAGGTGGCAGCAACCGTTGCTACAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGTGGCAAGGAAAGCCCCCATGATGATGATGTCAGTGGTTTGCTAGGAAGCTTGGAGCACAACCTCCCCGACAGTCCTTTTGCTTCTCCAACAAAAGGAGCCCGGGATTACTTGTCTGCATTCCCGGTCGCGGCCAGTGAGGCCAATGATTCATCTGATGCCTCAGCTGCAACAGCTAACATTAACTTGGCTACTTCCCTACTGCCAGCCACTTCCTCACTGGACATGGCATCTTTCAAGTCCTTTAACTGCCAAATTCCAAGGTTGTCTTCCGGCCATGGAGCCATAGGGATGTATGCCGCCGGCGCAGGGGGGCCGAAATGCCCGGTTGGAACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

751

Amino Acids

80.9

Weight (kDa)

6.04

Isoelectric Point (pI)

59.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 27 - 90 1e-32 AtC3H46 PABC domain
RRM_1 PF00076 417 - 462 6.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1889
AccB7I CCANNNNNTGG 3 cut(s) 674, 911, 1015
AccII CGCG 1 cut(s) 2042
AciI CCGC 5 cut(s) 726, 745, 1101, 2042, 2211
AclWI GGATC 2 cut(s) 125, 963
AcoI YGGCCR 2 cut(s) 2043, 2185
AcsI RAATTY 5 cut(s) 523, 787, 1133, 1308, 2166
AcuI CTGAAG 5 cut(s) 569, 1052, 1261, 1598, 1809
AdeI CACNNNGTG 2 cut(s) 235, 1496
AfaI GTAC 4 cut(s) 818, 833, 1355, 1501
AfiI CCNNNNNNNGG 9 cut(s) 542, 674, 720, 791, 911, 1015, 2006, 2041, 2220
AflIII ACRYGT 3 cut(s) 492, 1263, 1575
AgsI TTSAA 4 cut(s) 1298, 1634, 1744, 2149
AjiI CACGTC 1 cut(s) 1264
Alw21I GWGCWC 4 cut(s) 619, 904, 1693, 1971
Alw26I GTCTC 2 cut(s) 1355, 1518
AlwI GGATC 2 cut(s) 125, 963
Ama87I CYCGRG 3 cut(s) 215, 1413, 2013
AoxI GGCC 7 cut(s) 211, 1017, 1510, 2043, 2052, 2185, 2225
ApoI RAATTY 5 cut(s) 523, 787, 1133, 1308, 2166
ArsI GACNNNNNNTTYG 2 cut(s) 1973, 2005
AseI ATTAAT 1 cut(s) 1713
Asp700I GAANNNNTTC 1 cut(s) 960
AspLEI GCGC 1 cut(s) 2219
AspS9I GGNCC 6 cut(s) 130, 212, 554, 940, 1289, 2225
AsuC2I CCSGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
AsuHPI GGTGA 5 cut(s) 909, 1130, 1210, 1482, 1673
AsuII TTCGAA 1 cut(s) 442
AsuNHI GCTAGC 1 cut(s) 1700
AvaI CYCGRG 3 cut(s) 215, 1413, 2013
AvaII GGWCC 4 cut(s) 130, 554, 940, 1289
AxyI CCTNAGG 1 cut(s) 1851
BanI GGYRCC 1 cut(s) 1889
BanII GRGCYC 4 cut(s) 619, 739, 1693, 2014
BbsI GAAGAC 7 cut(s) 152, 423, 489, 651, 786, 1266, 2172
Bbv12I GWGCWC 4 cut(s) 619, 904, 1693, 1971
BbvCI CCTCAGC 2 cut(s) 1021, 2074
BccI CCATC 9 cut(s) 295, 406, 605, 890, 931, 1108, 1147, 1189, 1511
BclI TGATCA 1 cut(s) 682
BcnI CCSGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
BcoDI GTCTC 2 cut(s) 1355, 1518
BfaI CTAG 7 cut(s) 825, 849, 1544, 1551, 1701, 1803, 1955
BfmI CTRYAG 4 cut(s) 853, 999, 1655, 1872
BglI GCCNNNNNGGC 2 cut(s) 1094, 2051
BlpI GCTNAGC 1 cut(s) 1608
Bme1390I CCNGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
Bme18I GGWCC 4 cut(s) 130, 554, 940, 1289
BmeT110I CYCGRG 3 cut(s) 215, 1413, 2013
BmgBI CACGTC 1 cut(s) 1264
BmgT120I GGNCC 6 cut(s) 130, 212, 554, 940, 1289, 2225
BmrFI CCNGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
BmrI ACTGGG 3 cut(s) 640, 730, 1728
BmsI GCATC 6 cut(s) 1075, 1399, 1687, 1768, 2059, 2150
BmtI GCTAGC 1 cut(s) 1704
BmuI ACTGGG 3 cut(s) 640, 730, 1728
BpiI GAAGAC 7 cut(s) 152, 423, 489, 651, 786, 1266, 2172
BplI GAGNNNNNCTC 4 cut(s) 581, 613, 1784, 1816
BpmI CTGGAG 2 cut(s) 1523, 1616
Bpu10I CCTNAGC 2 cut(s) 1021, 2074
Bpu1102I GCTNAGC 1 cut(s) 1608
Bpu14I TTCGAA 1 cut(s) 442
BpuEI CTTGAG 7 cut(s) 227, 355, 590, 950, 1195, 1554, 1773
BpuMI CCSGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
BsaI GGTCTC 1 cut(s) 1518
BsaJI CCNNGG 7 cut(s) 78, 178, 216, 1148, 2013, 2171, 2188
BsaXI ACNNNNNCTCC 2 cut(s) 695, 725
Bsc4I CCNNNNNNNGG 9 cut(s) 542, 674, 720, 791, 911, 1015, 2006, 2041, 2220
Bse118I RCCGGY 1 cut(s) 2213
Bse1I ACTGG 9 cut(s) 646, 725, 943, 999, 1513, 1734, 1808, 2046, 2136
Bse21I CCTNAGG 1 cut(s) 1851
BseDI CCNNGG 7 cut(s) 78, 178, 216, 1148, 2013, 2171, 2188
BseGI GGATG 7 cut(s) 287, 1158, 1200, 1335, 1560, 1759, 2208
BseLI CCNNNNNNNGG 9 cut(s) 542, 674, 720, 791, 911, 1015, 2006, 2041, 2220
BseMII CTCAG 7 cut(s) 979, 1035, 1599, 1739, 1848, 1865, 2088
BseNI ACTGG 9 cut(s) 646, 725, 943, 999, 1513, 1734, 1808, 2046, 2136
BseRI GAGGAG 8 cut(s) 29, 587, 688, 1033, 1137, 1494, 1600, 1613
BseYI CCCAGC 4 cut(s) 473, 1008, 1190, 1204
Bsh1236I CGCG 1 cut(s) 2042
Bsh1285I CGRYCG 1 cut(s) 2040
BshFI GGCC 7 cut(s) 213, 1019, 1512, 2045, 2054, 2187, 2227
BshNI GGYRCC 1 cut(s) 1889
BsiEI CGRYCG 1 cut(s) 2040
BsiHKAI GWGCWC 4 cut(s) 619, 904, 1693, 1971
BsiHKCI CYCGRG 3 cut(s) 215, 1413, 2013
BsiSI CCGG 8 cut(s) 714, 748, 1358, 2014, 2036, 2184, 2214, 2237
BslFI GGGAC 4 cut(s) 276, 456, 896, 1714
BslI CCNNNNNNNGG 9 cut(s) 542, 674, 720, 791, 911, 1015, 2006, 2041, 2220
BsmAI GTCTC 2 cut(s) 1355, 1518
BsmFI GGGAC 4 cut(s) 276, 456, 896, 1714
BsmI GAATGC 1 cut(s) 2030
BsnI GGCC 7 cut(s) 213, 1019, 1512, 2045, 2054, 2187, 2227
Bso31I GGTCTC 1 cut(s) 1518
BsoBI CYCGRG 3 cut(s) 215, 1413, 2013
Bsp119I TTCGAA 1 cut(s) 442
Bsp1286I GDGCHC 6 cut(s) 619, 739, 904, 1693, 1971, 2014
Bsp143I GATC 5 cut(s) 117, 682, 968, 1142, 1534
Bsp1720I GCTNAGC 1 cut(s) 1608
Bsp19I CCATGG 3 cut(s) 78, 178, 2188
BspACI CCGC 5 cut(s) 726, 745, 1101, 2042, 2211
BspANI GGCC 7 cut(s) 213, 1019, 1512, 2045, 2054, 2187, 2227
BspCNI CTCAG 7 cut(s) 978, 1034, 1600, 1738, 1847, 1864, 2087
BspFNI CGCG 1 cut(s) 2042
BspMAI CTGCAG 2 cut(s) 1003, 1659
BspOI GCTAGC 1 cut(s) 1704
BspPI GGATC 2 cut(s) 125, 963
BspT104I TTCGAA 1 cut(s) 442
BspT107I GGYRCC 1 cut(s) 1889
BspTNI GGTCTC 1 cut(s) 1518
BsrFI RCCGGY 1 cut(s) 2213
BsrI ACTGG 9 cut(s) 646, 725, 943, 999, 1513, 1734, 1808, 2046, 2136
BssAI RCCGGY 1 cut(s) 2213
BssECI CCNNGG 7 cut(s) 78, 178, 216, 1148, 2013, 2171, 2188
BssMI GATC 5 cut(s) 117, 682, 968, 1142, 1534
BssT1I CCWWGG 4 cut(s) 78, 178, 2171, 2188
Bst4CI ACNGT 8 cut(s) 551, 707, 1184, 1366, 1867, 1898, 1907, 1985
Bst6I CTCTTC 1 cut(s) 1319
BstAPI GCANNNNNTGC 1 cut(s) 1868
BstBI TTCGAA 1 cut(s) 442
BstC8I GCNNGC 7 cut(s) 926, 1605, 1620, 1702, 1815, 2118, 2215
BstDEI CTNAG 8 cut(s) 965, 1021, 1047, 1608, 1725, 1834, 1851, 2074
BstDSI CCRYGG 3 cut(s) 78, 178, 2188
BstF5I GGATG 7 cut(s) 287, 1158, 1200, 1335, 1560, 1759, 2208
BstFNI CGCG 1 cut(s) 2042
BstHHI GCGC 1 cut(s) 2219
BstKTI GATC 5 cut(s) 120, 685, 971, 1145, 1537
BstMAI GTCTC 2 cut(s) 1355, 1518
BstMBI GATC 5 cut(s) 117, 682, 968, 1142, 1534
BstMCI CGRYCG 1 cut(s) 2040
BstNSI RCATGY 1 cut(s) 1579
BstSCI CCNGG 6 cut(s) 713, 1356, 2012, 2013, 2034, 2235
BstSFI CTRYAG 4 cut(s) 853, 999, 1655, 1872
BstUI CGCG 1 cut(s) 2042
BstV2I GAAGAC 7 cut(s) 152, 423, 489, 651, 786, 1266, 2172
BstX2I RGATCY 1 cut(s) 968
BstXI CCANNNNNNTGG 4 cut(s) 79, 154, 179, 481
BstYI RGATCY 1 cut(s) 968
Bsu36I CCTNAGG 1 cut(s) 1851
BsuRI GGCC 7 cut(s) 213, 1019, 1512, 2045, 2054, 2187, 2227
BtgI CCRYGG 3 cut(s) 78, 178, 2188
BtrI CACGTC 1 cut(s) 1264
BtsCI GGATG 7 cut(s) 287, 1158, 1200, 1335, 1560, 1759, 2208
BtsIMutI CAGTG 7 cut(s) 769, 1815, 1903, 1912, 1951, 2053, 2129
Cac8I GCNNGC 7 cut(s) 926, 1605, 1620, 1702, 1815, 2118, 2215
CfoI GCGC 1 cut(s) 2219
Cfr10I RCCGGY 1 cut(s) 2213
Cfr13I GGNCC 6 cut(s) 130, 212, 554, 940, 1289, 2225
Cfr9I CCCGGG 1 cut(s) 2013
Csp6I GTAC 4 cut(s) 817, 832, 1354, 1500
CviQI GTAC 4 cut(s) 817, 832, 1354, 1500
DdeI CTNAG 8 cut(s) 965, 1021, 1047, 1608, 1725, 1834, 1851, 2074
DpnI GATC 5 cut(s) 119, 684, 970, 1144, 1536
DpnII GATC 5 cut(s) 117, 682, 968, 1142, 1534
DraIII CACNNNGTG 2 cut(s) 235, 1496
EaeI YGGCCR 2 cut(s) 2043, 2185
Eam1104I CTCTTC 1 cut(s) 1319
EarI CTCTTC 1 cut(s) 1319
Ecl136II GAGCTC 2 cut(s) 617, 1691
Eco130I CCWWGG 4 cut(s) 78, 178, 2171, 2188
Eco24I GRGCYC 4 cut(s) 619, 739, 1693, 2014
Eco31I GGTCTC 1 cut(s) 1518
Eco32I GATATC 1 cut(s) 1126
Eco47I GGWCC 4 cut(s) 130, 554, 940, 1289
Eco53kI GAGCTC 2 cut(s) 617, 1691
Eco57I CTGAAG 5 cut(s) 569, 1052, 1261, 1598, 1809
Eco81I CCTNAGG 1 cut(s) 1851
Eco88I CYCGRG 3 cut(s) 215, 1413, 2013
EcoICRI GAGCTC 2 cut(s) 617, 1691
EcoRI GAATTC 3 cut(s) 523, 787, 1308
EcoRV GATATC 1 cut(s) 1126
EcoT14I CCWWGG 4 cut(s) 78, 178, 2171, 2188
EcoT38I GRGCYC 4 cut(s) 619, 739, 1693, 2014
ErhI CCWWGG 4 cut(s) 78, 178, 2171, 2188
FalI AAGNNNNNCTT 4 cut(s) 1596, 1628, 2164, 2196
FaqI GGGAC 4 cut(s) 276, 456, 896, 1714
FbaI TGATCA 1 cut(s) 682
FokI GGATG 7 cut(s) 274, 1165, 1207, 1342, 1567, 1746, 2215
FriOI GRGCYC 4 cut(s) 619, 739, 1693, 2014
FspBI CTAG 7 cut(s) 825, 849, 1544, 1551, 1701, 1803, 1955
GlaI GCGC 1 cut(s) 2218
GsaI CCCAGC 4 cut(s) 477, 1012, 1194, 1208
GsuI CTGGAG 2 cut(s) 1523, 1616
HaeIII GGCC 7 cut(s) 213, 1019, 1512, 2045, 2054, 2187, 2227
HapII CCGG 8 cut(s) 714, 748, 1358, 2014, 2036, 2184, 2214, 2237
HhaI GCGC 1 cut(s) 2219
Hin6I GCGC 1 cut(s) 2217
HinP1I GCGC 1 cut(s) 2217
HindIII AAGCTT 2 cut(s) 926, 1960
HinfI GANTC 7 cut(s) 83, 238, 469, 858, 876, 1883, 2060
HpaII CCGG 8 cut(s) 714, 748, 1358, 2014, 2036, 2184, 2214, 2237
HphI GGTGA 5 cut(s) 909, 1130, 1210, 1482, 1673
Hpy166II GTNNAC 6 cut(s) 111, 554, 917, 1201, 1354, 1502
Hpy188III TCNNGA 7 cut(s) 587, 1298, 1454, 1571, 1664, 1672, 1790
Hpy8I GTNNAC 6 cut(s) 111, 554, 917, 1201, 1354, 1502
HpyAV CCTTC 8 cut(s) 181, 247, 315, 324, 1073, 1435, 1635, 1773
HpyCH4III ACNGT 8 cut(s) 551, 707, 1184, 1366, 1867, 1898, 1907, 1985
HpyCH4IV ACGT 2 cut(s) 492, 1263
HpyCH4V TGCA 9 cut(s) 64, 837, 865, 1001, 1053, 1657, 1759, 2030, 2081
HpyF3I CTNAG 8 cut(s) 965, 1021, 1047, 1608, 1725, 1834, 1851, 2074
HpySE526I ACGT 2 cut(s) 492, 1263
HspAI GCGC 1 cut(s) 2217
KroI GCCGGC 1 cut(s) 2213
KroNI GCCGGC 1 cut(s) 2215
Ksp22I TGATCA 1 cut(s) 682
Kzo9I GATC 5 cut(s) 117, 682, 968, 1142, 1534
LweI GCATC 6 cut(s) 1075, 1399, 1687, 1768, 2059, 2150
MaeI CTAG 7 cut(s) 825, 849, 1544, 1551, 1701, 1803, 1955
MaeII ACGT 2 cut(s) 492, 1263
MaeIII GTNAC 4 cut(s) 1342, 1488, 1783, 1898
MalI GATC 5 cut(s) 119, 684, 970, 1144, 1536
MboI GATC 5 cut(s) 117, 682, 968, 1142, 1534
MflI RGATCY 1 cut(s) 968
MhlI GDGCHC 6 cut(s) 619, 739, 904, 1693, 1971, 2014
MluCI AATT 7 cut(s) 523, 787, 1133, 1270, 1308, 1714, 2166
MlyI GAGTC 1 cut(s) 478
MmeI TCCRAC 3 cut(s) 303, 2024, 2221
MreI CGCCGGCG 1 cut(s) 2213
MroNI GCCGGC 1 cut(s) 2213
MroXI GAANNNNTTC 1 cut(s) 960
MseI TTAA 4 cut(s) 741, 1713, 2094, 2157
MslI CAYNNNNRTG 4 cut(s) 77, 870, 1935, 2201
MspA1I CMGCKG 2 cut(s) 1238, 2078
MspI CCGG 8 cut(s) 714, 748, 1358, 2014, 2036, 2184, 2214, 2237
MspR9I CCNGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
Mva1269I GAATGC 1 cut(s) 2030
MvnI CGCG 1 cut(s) 2042
NaeI GCCGGC 1 cut(s) 2215
NciI CCSGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
NcoI CCATGG 3 cut(s) 78, 178, 2188
NdeII GATC 5 cut(s) 117, 682, 968, 1142, 1534
NgoMIV GCCGGC 1 cut(s) 2213
NheI GCTAGC 1 cut(s) 1700
NmuCI GTSAC 2 cut(s) 1488, 1898
NspI RCATGY 1 cut(s) 1579
NspV TTCGAA 1 cut(s) 442
PaeR7I CTCGAG 1 cut(s) 1413
PciI ACATGT 1 cut(s) 1575
PcsI WCGNNNNNNNCGW 1 cut(s) 555
PctI GAATGC 1 cut(s) 2030
PdiI GCCGGC 1 cut(s) 2215
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 6 cut(s) 83, 238, 858, 876, 1883, 2060
PflMI CCANNNNNTGG 3 cut(s) 674, 911, 1015
PfoI TCCNGGA 1 cut(s) 713
PleI GAGTC 1 cut(s) 477
PpsI GAGTC 1 cut(s) 477
PscI ACATGT 1 cut(s) 1575
PshBI ATTAAT 1 cut(s) 1713
Psp124BI GAGCTC 2 cut(s) 619, 1693
PspFI CCCAGC 4 cut(s) 473, 1008, 1190, 1204
PspPI GGNCC 6 cut(s) 130, 212, 554, 940, 1289, 2225
PspXI VCTCGAGB 1 cut(s) 1413
PstI CTGCAG 2 cut(s) 1003, 1659
PsuI RGATCY 1 cut(s) 968
PvuII CAGCTG 2 cut(s) 1238, 2078
RsaI GTAC 4 cut(s) 818, 833, 1355, 1501
RsaNI GTAC 4 cut(s) 817, 832, 1354, 1500
RseI CAYNNNNRTG 4 cut(s) 77, 870, 1935, 2201
SacI GAGCTC 2 cut(s) 619, 1693
SaqAI TTAA 4 cut(s) 741, 1713, 2094, 2157
Sau3AI GATC 5 cut(s) 117, 682, 968, 1142, 1534
Sau96I GGNCC 6 cut(s) 130, 212, 554, 940, 1289, 2225
SchI GAGTC 1 cut(s) 478
ScrFI CCNGG 6 cut(s) 715, 1358, 2014, 2015, 2036, 2237
SduI GDGCHC 6 cut(s) 619, 739, 904, 1693, 1971, 2014
SfaNI GCATC 6 cut(s) 1075, 1399, 1687, 1768, 2059, 2150
SfcI CTRYAG 4 cut(s) 853, 999, 1655, 1872
SfiI GGCCNNNNNGGCC 1 cut(s) 2051
Sfr274I CTCGAG 1 cut(s) 1413
SfuI TTCGAA 1 cut(s) 442
SgrAI CRCCGGYG 1 cut(s) 2213
SinI GGWCC 4 cut(s) 130, 554, 940, 1289
SlaI CTCGAG 1 cut(s) 1413
SmaI CCCGGG 1 cut(s) 2015
SmiMI CAYNNNNRTG 4 cut(s) 77, 870, 1935, 2201
SmlI CTYRAG 8 cut(s) 242, 370, 569, 929, 1210, 1413, 1569, 1788
SmoI CTYRAG 8 cut(s) 242, 370, 569, 929, 1210, 1413, 1569, 1788
Sse9I AATT 7 cut(s) 523, 787, 1133, 1270, 1308, 1714, 2166
SsiI CCGC 5 cut(s) 726, 745, 1101, 2042, 2211
SspMI CTAG 7 cut(s) 825, 849, 1544, 1551, 1701, 1803, 1955
SstI GAGCTC 2 cut(s) 619, 1693
StyD4I CCNGG 6 cut(s) 713, 1356, 2012, 2013, 2034, 2235
StyI CCWWGG 4 cut(s) 78, 178, 2171, 2188
TaaI ACNGT 8 cut(s) 551, 707, 1184, 1366, 1867, 1898, 1907, 1985
TaiI ACGT 2 cut(s) 495, 1266
TaqI TCGA 5 cut(s) 350, 442, 1141, 1414, 1626
TasI AATT 7 cut(s) 523, 787, 1133, 1270, 1308, 1714, 2166
TatI WGTACW 1 cut(s) 816
TauI GCSGC 3 cut(s) 1103, 2045, 2213
TfiI GAWTC 6 cut(s) 83, 238, 858, 876, 1883, 2060
Tru1I TTAA 4 cut(s) 741, 1713, 2094, 2157
Tru9I TTAA 4 cut(s) 741, 1713, 2094, 2157
TscAI CASTG 7 cut(s) 769, 1815, 1903, 1912, 1951, 2053, 2136
TseFI GTSAC 2 cut(s) 1488, 1898
Tsp45I GTSAC 2 cut(s) 1488, 1898
TspGWI ACGGA 1 cut(s) 748
TspMI CCCGGG 1 cut(s) 2013
TspRI CASTG 7 cut(s) 769, 1815, 1903, 1912, 1951, 2053, 2136
Van91I CCANNNNNTGG 3 cut(s) 674, 911, 1015
VpaK11BI GGWCC 4 cut(s) 130, 554, 940, 1289
VspI ATTAAT 1 cut(s) 1713
XapI RAATTY 5 cut(s) 523, 787, 1133, 1308, 2166
XceI RCATGY 1 cut(s) 1579
XcmI CCANNNNNNNNNTGG 1 cut(s) 2128
XhoI CTCGAG 1 cut(s) 1413
XmaI CCCGGG 1 cut(s) 2013
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 7 cut(s) 825, 849, 1544, 1551, 1701, 1803, 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.