Rh1BG034100

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0001189
Physical Location & Seq
Forward (+)
4664448 .. 4669776
5329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG034100.1

Sequence Viewer

Length: 1899 bp
ATGGATTCCTATGAAGCTACAAGGATTGTGTTCTCAAGGATCACGAACTTGGACCCAGAAAATGCATCCAAAATCATGGGTCTTCTTCTAATCCAAGACCATGGAGAGAAGGAGATGATACGATTAGCTTTCGGCCCCGAGGCGTTTCTCCACTCTGTGATTCTCAAGGCTCGGAAGGACTTGGGACTAATGCCCATATCCAACTCTCCATCCACACCCACCACACCTTCTTCCCCTTCGCCTTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAGAACTCTGCTTCCTCAAGGCTATCTCTCACTATACCAAACCCATCTTCTTCTGCTTCTACTTGGGCTGCTCTGTCTTCCGAGCTTCGAAACCAAGACGAAAGTATGATGATGAGTCCCAACAACATGGCTCCTAACGTGTCTTCTTCTTCTTCATCTTCCATGATGAATTCCTCTCTACCCTTTTTCGGAAACGGCGGGCCCGACCATGGGCTTGAGGAGTTTCAGCTTCAAGACCAGCTCTCTTTTCTCAACGATGGAGCTCCCAAATCCCCTGACTTGTTCTACCCCCAGTTGGACTTGTCTTCGAGCCCAACTAATGGTTCTGATCAGACCCTTTCCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTCACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCCGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATCGGGGACTTGGGTCCAGATGGTGCTCCACTTGTTGGTTCACCAAGCAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCCAAGTGCGTGAACTTCCTTATTCAGCAGCAACAAACTGATGCGCAGAGGGCTGCTGCAGCCTTGATGATGGGGGATGATATCCACAAATTTAGTCGATCTCCTCGGATGGAAAGGAACGAGTTTCCAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCAAATTACTTCAGCATTTATGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCATATTTTGGCCAAAGGGAACCCTCATTTTGTTTGTGATGCTCGAGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGTACAGGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGTACACCTACTGGCCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGATGTTTTACAACTCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCTGAGCTTCAGCAAGCACTTGAACTTCAAAGCCGAAGGCTTATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCTAGCAGTCCGATTAATTCTCCTACTCAGTCCCCCAGTATGTTCAATCAGAACTTTGTGCATCCTTCATTTCATAACCCAGAAGTTACTAAAGAGAACTGCGCTAGTCCAGTACCACCCATTTCTTCAGCTCTCTCAGCAGACCAGCAGGCTCAGGTGGCAGCAACCGTTGCTACAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGCGGCAAGGAAAGCCCCCATGATGACGATGTCAGTGGTTTGCTAGGAAGGTATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

632

Amino Acids

68.94

Weight (kDa)

6.33

Isoelectric Point (pI)

57.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 64 3.6e-33 AtC3H46 PABC domain
RRM_1 PF00076 391 - 436 5.2e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1011
AccB1I GGYRCC 1 cut(s) 1817
AccB7I CCANNNNNTGG 3 cut(s) 596, 833, 937
AccBSI CCGCTC 1 cut(s) 1842
AciI CCGC 4 cut(s) 474, 648, 667, 1842
AclWI GGATC 2 cut(s) 47, 885
AcoI YGGCCR 1 cut(s) 1302
AcsI RAATTY 4 cut(s) 445, 709, 1055, 1230
AcuI CTGAAG 3 cut(s) 1183, 1526, 1737
AdeI CACNNNGTG 2 cut(s) 157, 1424
AfaI GTAC 6 cut(s) 740, 755, 1277, 1385, 1429, 1740
AflIII ACRYGT 3 cut(s) 414, 1185, 1503
AgsI TTSAA 5 cut(s) 509, 1220, 1556, 1562, 1672
AjiI CACGTC 1 cut(s) 1186
AjuI GAANNNNNNNTTGG 8 cut(s) 253, 285, 307, 339, 583, 615, 1283, 1315
AloI GAACNNNNNNTCC 2 cut(s) 272, 304
Alw21I GWGCWC 3 cut(s) 541, 826, 1621
Alw26I GTCTC 2 cut(s) 1277, 1446
AlwI GGATC 2 cut(s) 47, 885
Ama87I CYCGRG 2 cut(s) 137, 1335
AoxI GGCC 5 cut(s) 133, 476, 939, 1302, 1438
ApaI GGGCCC 1 cut(s) 480
ApoI RAATTY 4 cut(s) 445, 709, 1055, 1230
AseI ATTAAT 1 cut(s) 1641
Asp700I GAANNNNTTC 1 cut(s) 882
AspLEI GCGC 2 cut(s) 1012, 1730
AspS9I GGNCC 7 cut(s) 52, 134, 476, 477, 812, 862, 1211
AsuC2I CCSGG 3 cut(s) 637, 715, 1280
AsuHPI GGTGA 5 cut(s) 656, 831, 1132, 1410, 1601
AsuII TTCGAA 1 cut(s) 364
AsuNHI GCTAGC 1 cut(s) 1628
AvaI CYCGRG 2 cut(s) 137, 1335
AvaII GGWCC 4 cut(s) 52, 812, 862, 1211
BaeGI GKGCMC 1 cut(s) 480
BalI TGGCCA 1 cut(s) 1304
BanI GGYRCC 1 cut(s) 1817
BanII GRGCYC 5 cut(s) 480, 541, 590, 661, 1621
BbsI GAAGAC 6 cut(s) 74, 345, 411, 573, 708, 1188
Bbv12I GWGCWC 3 cut(s) 541, 826, 1621
BbvCI CCTCAGC 1 cut(s) 943
BccI CCATC 9 cut(s) 217, 328, 527, 812, 853, 1030, 1069, 1111, 1439
BceAI ACGGC 1 cut(s) 487
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 3 cut(s) 637, 715, 1280
BcoDI GTCTC 2 cut(s) 1277, 1446
BfaI CTAG 7 cut(s) 747, 771, 1472, 1479, 1629, 1731, 1883
BfmI CTRYAG 5 cut(s) 775, 921, 1023, 1583, 1800
BlpI GCTNAGC 1 cut(s) 1536
Bme1390I CCNGG 3 cut(s) 637, 715, 1280
Bme18I GGWCC 4 cut(s) 52, 812, 862, 1211
BmeT110I CYCGRG 2 cut(s) 137, 1335
BmgBI CACGTC 1 cut(s) 1186
BmgT120I GGNCC 7 cut(s) 52, 134, 476, 477, 812, 862, 1211
BmiI GGNNCC 8 cut(s) 54, 136, 408, 478, 634, 813, 1313, 1819
BmrFI CCNGG 3 cut(s) 637, 715, 1280
BmrI ACTGGG 3 cut(s) 562, 652, 1656
BmsI GCATC 5 cut(s) 74, 997, 1321, 1615, 1696
BmtI GCTAGC 1 cut(s) 1632
BmuI ACTGGG 3 cut(s) 562, 652, 1656
BoxI GACNNNNGTC 1 cut(s) 810
BpiI GAAGAC 6 cut(s) 74, 345, 411, 573, 708, 1188
BpmI CTGGAG 2 cut(s) 1451, 1544
Bpu10I CCTNAGC 2 cut(s) 943, 1779
Bpu1102I GCTNAGC 1 cut(s) 1536
Bpu14I TTCGAA 1 cut(s) 364
BpuEI CTTGAG 7 cut(s) 19, 149, 277, 512, 872, 1117, 1482
BpuMI CCSGG 3 cut(s) 637, 715, 1280
BsaI GGTCTC 1 cut(s) 1446
BsaJI CCNNGG 4 cut(s) 100, 138, 484, 1070
BsaXI ACNNNNNCTCC 2 cut(s) 617, 647
Bse1I ACTGG 7 cut(s) 568, 647, 865, 921, 1441, 1662, 1736
BseDI CCNNGG 4 cut(s) 100, 138, 484, 1070
BseGI GGATG 8 cut(s) 65, 209, 1048, 1080, 1122, 1257, 1488, 1687
BseMII CTCAG 6 cut(s) 901, 957, 1527, 1667, 1776, 1793
BseNI ACTGG 7 cut(s) 568, 647, 865, 921, 1441, 1662, 1736
BseRI GAGGAG 7 cut(s) 509, 610, 955, 1059, 1422, 1528, 1541
BseSI GKGCMC 1 cut(s) 480
BseYI CCCAGC 3 cut(s) 930, 1112, 1126
BshFI GGCC 5 cut(s) 135, 478, 941, 1304, 1440
BshNI GGYRCC 1 cut(s) 1817
BsiHKAI GWGCWC 3 cut(s) 541, 826, 1621
BsiHKCI CYCGRG 2 cut(s) 137, 1335
BsiSI CCGG 4 cut(s) 636, 670, 714, 1280
BslFI GGGAC 4 cut(s) 198, 378, 818, 1642
BsmAI GTCTC 2 cut(s) 1277, 1446
BsmFI GGGAC 4 cut(s) 198, 378, 818, 1642
BsnI GGCC 5 cut(s) 135, 478, 941, 1304, 1440
Bso31I GGTCTC 1 cut(s) 1446
BsoBI CYCGRG 2 cut(s) 137, 1335
Bsp119I TTCGAA 1 cut(s) 364
Bsp120I GGGCCC 1 cut(s) 476
Bsp1286I GDGCHC 6 cut(s) 480, 541, 590, 661, 826, 1621
Bsp143I GATC 5 cut(s) 39, 604, 890, 1064, 1462
Bsp1720I GCTNAGC 1 cut(s) 1536
Bsp19I CCATGG 2 cut(s) 100, 484
BspACI CCGC 4 cut(s) 474, 648, 667, 1842
BspANI GGCC 5 cut(s) 135, 478, 941, 1304, 1440
BspCNI CTCAG 6 cut(s) 900, 956, 1528, 1666, 1775, 1792
BspLI GGNNCC 8 cut(s) 54, 136, 408, 478, 634, 813, 1313, 1819
BspMAI CTGCAG 3 cut(s) 925, 1027, 1587
BspOI GCTAGC 1 cut(s) 1632
BspPI GGATC 2 cut(s) 47, 885
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 1817
BspTNI GGTCTC 1 cut(s) 1446
BsrBI CCGCTC 1 cut(s) 1842
BsrI ACTGG 7 cut(s) 568, 647, 865, 921, 1441, 1662, 1736
BssECI CCNNGG 4 cut(s) 100, 138, 484, 1070
BssMI GATC 5 cut(s) 39, 604, 890, 1064, 1462
BssT1I CCWWGG 2 cut(s) 100, 484
Bst4CI ACNGT 6 cut(s) 629, 1106, 1288, 1795, 1826, 1835
Bst6I CTCTTC 2 cut(s) 666, 1241
BstAPI GCANNNNNTGC 1 cut(s) 1796
BstBI TTCGAA 1 cut(s) 364
BstC8I GCNNGC 6 cut(s) 476, 848, 1533, 1548, 1630, 1776
BstDEI CTNAG 6 cut(s) 887, 943, 1536, 1653, 1762, 1779
BstDSI CCRYGG 2 cut(s) 100, 484
BstF5I GGATG 8 cut(s) 65, 209, 1048, 1080, 1122, 1257, 1488, 1687
BstHHI GCGC 2 cut(s) 1012, 1730
BstKTI GATC 5 cut(s) 42, 607, 893, 1067, 1465
BstMAI GTCTC 2 cut(s) 1277, 1446
BstMBI GATC 5 cut(s) 39, 604, 890, 1064, 1462
BstNSI RCATGY 1 cut(s) 1507
BstPAI GACNNNNGTC 1 cut(s) 810
BstSCI CCNGG 3 cut(s) 635, 713, 1278
BstSFI CTRYAG 5 cut(s) 775, 921, 1023, 1583, 1800
BstSLI GKGCMC 1 cut(s) 480
BstV2I GAAGAC 6 cut(s) 74, 345, 411, 573, 708, 1188
BstX2I RGATCY 1 cut(s) 890
BstXI CCANNNNNNTGG 3 cut(s) 76, 101, 403
BstYI RGATCY 1 cut(s) 890
BsuRI GGCC 5 cut(s) 135, 478, 941, 1304, 1440
BtgI CCRYGG 2 cut(s) 100, 484
BtrI CACGTC 1 cut(s) 1186
BtsCI GGATG 8 cut(s) 65, 209, 1048, 1080, 1122, 1257, 1488, 1687
BtsIMutI CAGTG 4 cut(s) 691, 1831, 1840, 1879
Cac8I GCNNGC 6 cut(s) 476, 848, 1533, 1548, 1630, 1776
CfoI GCGC 2 cut(s) 1012, 1730
Cfr13I GGNCC 7 cut(s) 52, 134, 476, 477, 812, 862, 1211
Csp6I GTAC 6 cut(s) 739, 754, 1276, 1384, 1428, 1739
CviQI GTAC 6 cut(s) 739, 754, 1276, 1384, 1428, 1739
DdeI CTNAG 6 cut(s) 887, 943, 1536, 1653, 1762, 1779
DpnI GATC 5 cut(s) 41, 606, 892, 1066, 1464
DpnII GATC 5 cut(s) 39, 604, 890, 1064, 1462
DraIII CACNNNGTG 2 cut(s) 157, 1424
EaeI YGGCCR 1 cut(s) 1302
Eam1104I CTCTTC 2 cut(s) 666, 1241
EarI CTCTTC 2 cut(s) 666, 1241
Ecl136II GAGCTC 2 cut(s) 539, 1619
Eco130I CCWWGG 2 cut(s) 100, 484
Eco24I GRGCYC 5 cut(s) 480, 541, 590, 661, 1621
Eco31I GGTCTC 1 cut(s) 1446
Eco32I GATATC 1 cut(s) 1048
Eco47I GGWCC 4 cut(s) 52, 812, 862, 1211
Eco53kI GAGCTC 2 cut(s) 539, 1619
Eco57I CTGAAG 3 cut(s) 1183, 1526, 1737
Eco88I CYCGRG 2 cut(s) 137, 1335
EcoICRI GAGCTC 2 cut(s) 539, 1619
EcoRI GAATTC 3 cut(s) 445, 709, 1230
EcoRV GATATC 1 cut(s) 1048
EcoT14I CCWWGG 2 cut(s) 100, 484
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 5 cut(s) 480, 541, 590, 661, 1621
ErhI CCWWGG 2 cut(s) 100, 484
FalI AAGNNNNNCTT 2 cut(s) 1524, 1556
FaqI GGGAC 4 cut(s) 198, 378, 818, 1642
FauI CCCGC 1 cut(s) 467
FbaI TGATCA 1 cut(s) 604
FokI GGATG 8 cut(s) 52, 196, 1055, 1087, 1129, 1264, 1495, 1674
FriOI GRGCYC 5 cut(s) 480, 541, 590, 661, 1621
FspBI CTAG 7 cut(s) 747, 771, 1472, 1479, 1629, 1731, 1883
FspI TGCGCA 1 cut(s) 1011
GlaI GCGC 2 cut(s) 1011, 1729
GsaI CCCAGC 3 cut(s) 934, 1116, 1130
GsuI CTGGAG 2 cut(s) 1451, 1544
HaeIII GGCC 5 cut(s) 135, 478, 941, 1304, 1440
HapII CCGG 4 cut(s) 636, 670, 714, 1280
HhaI GCGC 2 cut(s) 1012, 1730
Hin6I GCGC 2 cut(s) 1010, 1728
HinP1I GCGC 2 cut(s) 1010, 1728
HindIII AAGCTT 1 cut(s) 848
HinfI GANTC 6 cut(s) 5, 160, 391, 780, 798, 1811
HpaII CCGG 4 cut(s) 636, 670, 714, 1280
HphI GGTGA 5 cut(s) 656, 831, 1132, 1410, 1601
Hpy166II GTNNAC 5 cut(s) 839, 979, 1123, 1276, 1430
Hpy188III TCNNGA 8 cut(s) 43, 509, 815, 1220, 1376, 1499, 1592, 1600
Hpy8I GTNNAC 5 cut(s) 839, 979, 1123, 1276, 1430
HpyAV CCTTC 8 cut(s) 103, 169, 237, 246, 1357, 1563, 1701, 1881
HpyCH4III ACNGT 6 cut(s) 629, 1106, 1288, 1795, 1826, 1835
HpyCH4IV ACGT 2 cut(s) 414, 1185
HpyCH4V TGCA 7 cut(s) 65, 759, 787, 923, 1025, 1585, 1687
HpyF3I CTNAG 6 cut(s) 887, 943, 1536, 1653, 1762, 1779
HpySE526I ACGT 2 cut(s) 414, 1185
HspAI GCGC 2 cut(s) 1010, 1728
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 5 cut(s) 39, 604, 890, 1064, 1462
LguI GCTCTTC 1 cut(s) 666
LweI GCATC 5 cut(s) 74, 997, 1321, 1615, 1696
MaeI CTAG 7 cut(s) 747, 771, 1472, 1479, 1629, 1731, 1883
MaeII ACGT 2 cut(s) 414, 1185
MaeIII GTNAC 4 cut(s) 1264, 1416, 1711, 1826
MalI GATC 5 cut(s) 41, 606, 892, 1066, 1464
MbiI CCGCTC 1 cut(s) 1842
MboI GATC 5 cut(s) 39, 604, 890, 1064, 1462
MflI RGATCY 1 cut(s) 890
MhlI GDGCHC 6 cut(s) 480, 541, 590, 661, 826, 1621
MlsI TGGCCA 1 cut(s) 1304
MluCI AATT 6 cut(s) 445, 709, 1055, 1192, 1230, 1642
MluNI TGGCCA 1 cut(s) 1304
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 2 cut(s) 225, 552
Mox20I TGGCCA 1 cut(s) 1304
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 882
MscI TGGCCA 1 cut(s) 1304
MseI TTAA 1 cut(s) 1641
MslI CAYNNNNRTG 1 cut(s) 792
Msp20I TGGCCA 1 cut(s) 1304
MspA1I CMGCKG 1 cut(s) 1160
MspI CCGG 4 cut(s) 636, 670, 714, 1280
MspR9I CCNGG 3 cut(s) 637, 715, 1280
NciI CCSGG 3 cut(s) 637, 715, 1280
NcoI CCATGG 2 cut(s) 100, 484
NdeII GATC 5 cut(s) 39, 604, 890, 1064, 1462
NheI GCTAGC 1 cut(s) 1628
NlaIV GGNNCC 8 cut(s) 54, 136, 408, 478, 634, 813, 1313, 1819
NmuCI GTSAC 2 cut(s) 1416, 1826
NsbI TGCGCA 1 cut(s) 1011
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 1 cut(s) 1507
NspV TTCGAA 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 1335
PciI ACATGT 1 cut(s) 1503
PciSI GCTCTTC 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PdmI GAANNNNTTC 1 cut(s) 882
PfeI GAWTC 5 cut(s) 5, 160, 780, 798, 1811
PflFI GACNNNGTC 1 cut(s) 1868
PflMI CCANNNNNTGG 3 cut(s) 596, 833, 937
PfoI TCCNGGA 1 cut(s) 635
PleI GAGTC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 399
PscI ACATGT 1 cut(s) 1503
PshAI GACNNNNGTC 1 cut(s) 810
PshBI ATTAAT 1 cut(s) 1641
Psp124BI GAGCTC 2 cut(s) 541, 1621
PspFI CCCAGC 3 cut(s) 930, 1112, 1126
PspN4I GGNNCC 8 cut(s) 54, 136, 408, 478, 634, 813, 1313, 1819
PspOMI GGGCCC 1 cut(s) 476
PspPI GGNCC 7 cut(s) 52, 134, 476, 477, 812, 862, 1211
PspXI VCTCGAGB 1 cut(s) 1335
PstI CTGCAG 3 cut(s) 925, 1027, 1587
PsuI RGATCY 1 cut(s) 890
PsyI GACNNNGTC 1 cut(s) 1868
PvuII CAGCTG 1 cut(s) 1160
RsaI GTAC 6 cut(s) 740, 755, 1277, 1385, 1429, 1740
RsaNI GTAC 6 cut(s) 739, 754, 1276, 1384, 1428, 1739
RseI CAYNNNNRTG 1 cut(s) 792
SacI GAGCTC 2 cut(s) 541, 1621
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 1 cut(s) 1641
Sau3AI GATC 5 cut(s) 39, 604, 890, 1064, 1462
Sau96I GGNCC 7 cut(s) 52, 134, 476, 477, 812, 862, 1211
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 3 cut(s) 637, 715, 1280
SduI GDGCHC 6 cut(s) 480, 541, 590, 661, 826, 1621
SfaNI GCATC 5 cut(s) 74, 997, 1321, 1615, 1696
SfcI CTRYAG 5 cut(s) 775, 921, 1023, 1583, 1800
Sfr274I CTCGAG 1 cut(s) 1335
SfuI TTCGAA 1 cut(s) 364
SinI GGWCC 4 cut(s) 52, 812, 862, 1211
SlaI CTCGAG 1 cut(s) 1335
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 8 cut(s) 34, 164, 292, 491, 851, 1132, 1335, 1497
SmoI CTYRAG 8 cut(s) 34, 164, 292, 491, 851, 1132, 1335, 1497
Sse9I AATT 6 cut(s) 445, 709, 1055, 1192, 1230, 1642
SsiI CCGC 4 cut(s) 474, 648, 667, 1842
SspMI CTAG 7 cut(s) 747, 771, 1472, 1479, 1629, 1731, 1883
SstI GAGCTC 2 cut(s) 541, 1621
StyD4I CCNGG 3 cut(s) 635, 713, 1278
StyI CCWWGG 2 cut(s) 100, 484
TaaI ACNGT 6 cut(s) 629, 1106, 1288, 1795, 1826, 1835
TaiI ACGT 2 cut(s) 417, 1188
TaqI TCGA 5 cut(s) 272, 364, 584, 1063, 1336
TasI AATT 6 cut(s) 445, 709, 1055, 1192, 1230, 1642
TatI WGTACW 2 cut(s) 738, 1383
TauI GCSGC 1 cut(s) 1845
TfiI GAWTC 5 cut(s) 5, 160, 780, 798, 1811
Tru1I TTAA 1 cut(s) 1641
Tru9I TTAA 1 cut(s) 1641
TscAI CASTG 4 cut(s) 691, 1831, 1840, 1879
TseFI GTSAC 2 cut(s) 1416, 1826
Tsp45I GTSAC 2 cut(s) 1416, 1826
TspDTI ATGAA 7 cut(s) 27, 420, 458, 891, 1115, 1683, 1688
TspGWI ACGGA 1 cut(s) 670
TspRI CASTG 4 cut(s) 691, 1831, 1840, 1879
Tth111I GACNNNGTC 1 cut(s) 1868
Van91I CCANNNNNTGG 3 cut(s) 596, 833, 937
VpaK11BI GGWCC 4 cut(s) 52, 812, 862, 1211
VspI ATTAAT 1 cut(s) 1641
XapI RAATTY 4 cut(s) 445, 709, 1055, 1230
XceI RCATGY 1 cut(s) 1507
XhoI CTCGAG 1 cut(s) 1335
XmnI GAANNNNTTC 1 cut(s) 882
XspI CTAG 7 cut(s) 747, 771, 1472, 1479, 1629, 1731, 1883
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.