RchiOBHm_Chr5g0053281

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0001189
Physical Location & Seq
Forward (+)
55538128 .. 55542280
4153 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33056

Sequence Viewer

Length: 1836 bp
ATGGATTCATACGAAGCTACCAGGATCGTTTTCTCAAGGATCCAGAGCTTGGATTCAGAAAATGCATCAAAAATCATGGGGTACCTTTTGATTCAAGACCAGGGTGAGAAGGAGATGATACGCTTAGCATTTGGACCAGAGACTCTGCTTCACAATCTCATCATCAATGCCAAAACCCATCTGGGTCTTGTTCACTCCAAGACTCCATCTTTCAACCCCATTTCCAGGCCCAACTCACTTCCTCTTTCATCTTCTCCAACCTCAAATCTTTGGAGCCTCAGCAACCCCATTAGTCCCAGCTCGACTTGTTCACCTACTTATGCCAATGTTGTTAGCAAAAACACTAACCTTGCTTCTGGATCTTTATCGCCATCCATCAATGACTCTTCTAGTGCTACTGAGCTTGTTGACAACTTCCAGTTTTCTTTCCTCAATGATCCCAAAACGGACGAGGAGTTTTTCGATGGAGGCCCCGAAGGTGTTTATGGTAATTCCTCGATGAACAAGCAGAGCTACTCTGCTCACTGCGGCTGTGCTTTTGGTTCTGAAGATGTGAATTCCGGGCTCGGATGGAAACCATGTTCGTATTTTGCAAGAGGGTTCTGTAAAAACGGAAGTAGTTGCCGTTTTCTCCACAGTGATGGCTTGCCTGGAAATGTCAGTATGCTTGAGCAGTGTGAAGACTTGCTCAGATCCAATGCTGCTGCCCAGCAACACAAACTTGCTACAGTGTCACAGTTCATGTCCAATGGTTCTTCTTTGCCTTACAACAGGTGCCTCAACTTTCTTATGCAACAACAAAATGACACCCAAAGGTCATTGATGATGGGAGAAGAGCTTCTCAAGTTTGGGAGATACCAACATGAGAGAAATGACATTTCGAGTTTGGGTGGAAATGTAATTCCCAGTTCAAGGCAGATCTACTTGACATTCCCAGCTGATAGTACATTTAGAGAAGAAGATGTCTCTAATTATTTCAACATGTTTGGACCTGTGCAAGATGTGAGGATTCCATACCAGCAGAAGAGAATGTTTGGGTTCGTTACATTTGTATATTCAGAAACTGTGAGGATCATTTTGGCCAAAGGGAACCCTCATTTTGTATGTGATTCTCGGGTGCTTGTGAAGCCTTATAAGGAGAAGGGGAAAATACCAGACAGGAAGCTGCACCAACATTTGGAGAGGGGAGACTATTCTCTGTGTTCAAGCCTATCTGGGCTTGATTCTAGGGAGCCTTATGACTTCAATCTTGGATCAAGAATGTATTACAGTACCCAAGAGATGCTGTTGCGAAGGAAATTAGAGGACCAAGCGAACTTGGAGCAAGCTATTGAACTCCAAGAAAGAAGACTTACGAATATGCAACTTCTAGGCATCAAGAATAACAATCATCATCAATACTATCAAGGTCTATCAGAAGGGTCTCCATTTCCCTCCCCAACGTTCTCACATGCAGCTAAAAATCAATCCCTCACAGATGTCTCAGAAGTCATTTCCCAAAGTTATGCTTTAGATGGTGAACAACAAGAAGAGGAGAAGAGTGGCAAGGACCAATCCAATGCTGAAGAGTGTGACCTGCATCAAAGTGTGGAGCACATTCTCCCTGATAACCTGTTTGCTTCACCAGCAGTAGTAGCTGGAGACCACATAAATGTCTTCTCAACTGCTTCTGCGCCATTCAATGAAAGCACCTCAGCAATATCTTCTTCTTCTAATAGCAATAGCAATAATTTACTGCCAACCGCTTCTACTTCTACGTCCAATGCAACTTCCCCAAAATCCGTTCTCTCCAGCTCAGGTTTTCTTTTGGGTATGGAACCACTGGAATGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 zf-CCCH

Protein Analysis

611

Amino Acids

67.6

Weight (kDa)

5.44

Isoelectric Point (pI)

55.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 65 4e-34 AtC3H46 PABC domain
zf-CCCH PF00642 193 - 213 3.9e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
Acc36I ACCTGC 1 cut(s) 1584
Acc65I GGTACC 1 cut(s) 81
AccB1I GGYRCC 2 cut(s) 81, 774
AccB7I CCANNNNNTGG 2 cut(s) 49, 1177
AciI CCGC 2 cut(s) 528, 1743
AclI AACGTT 1 cut(s) 1442
AclWI GGATC 8 cut(s) 32, 34, 47, 367, 431, 687, 1079, 1261
AcoI YGGCCR 1 cut(s) 1080
AcsI RAATTY 1 cut(s) 556
AcuI CTGAAG 2 cut(s) 567, 1584
AfaI GTAC 3 cut(s) 83, 946, 1273
AfiI CCNNNNNNNGG 4 cut(s) 49, 225, 912, 1177
AflIII ACRYGT 1 cut(s) 981
AgsI TTSAA 8 cut(s) 95, 214, 912, 979, 1206, 1246, 1334, 1681
AjnI CCWGG 4 cut(s) 20, 99, 224, 649
AloI GAACNNNNNNTCC 2 cut(s) 565, 597
Alw21I GWGCWC 1 cut(s) 1596
Alw26I GTCTC 6 cut(s) 134, 970, 1182, 1428, 1486, 1635
AlwI GGATC 8 cut(s) 32, 34, 47, 367, 431, 687, 1079, 1261
AlwNI CAGNNNCTG 1 cut(s) 1064
Ama87I CYCGRG 1 cut(s) 1113
AoxI GGCC 3 cut(s) 227, 469, 1080
ApeKI GCWGC 4 cut(s) 701, 704, 1165, 1454
ApoI RAATTY 1 cut(s) 556
Asp700I GAANNNNTTC 1 cut(s) 837
Asp718I GGTACC 1 cut(s) 81
AspLEI GCGC 1 cut(s) 1675
AspS9I GGNCC 6 cut(s) 134, 228, 470, 989, 1306, 1549
AsuC2I CCSGG 1 cut(s) 562
AsuHPI GGTGA 4 cut(s) 116, 303, 1529, 1614
AvaI CYCGRG 1 cut(s) 1113
AvaII GGWCC 4 cut(s) 134, 989, 1306, 1549
BalI TGGCCA 1 cut(s) 1082
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 2 cut(s) 81, 774
BanII GRGCYC 1 cut(s) 567
BbsI GAAGAC 3 cut(s) 687, 1354, 1648
Bbv12I GWGCWC 1 cut(s) 1596
BbvCI CCTCAGC 2 cut(s) 278, 1693
BbvI GCAGC 4 cut(s) 688, 691, 1152, 1466
BccI CCATC 9 cut(s) 186, 214, 379, 383, 458, 564, 635, 820, 1508
BceAI ACGGC 1 cut(s) 609
BciT130I CCWGG 4 cut(s) 22, 101, 226, 651
BcnI CCSGG 1 cut(s) 562
BcoDI GTCTC 6 cut(s) 134, 970, 1182, 1428, 1486, 1635
BfaI CTAG 3 cut(s) 390, 1227, 1370
BfmI CTRYAG 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 1584
BglII AGATCT 1 cut(s) 918
BisI GCNGC 5 cut(s) 529, 702, 705, 1166, 1455
BlpI GCTNAGC 1 cut(s) 124
BlsI GCNGC 5 cut(s) 530, 703, 706, 1167, 1456
Bme1390I CCNGG 5 cut(s) 22, 101, 226, 562, 651
Bme18I GGWCC 4 cut(s) 134, 989, 1306, 1549
BmeT110I CYCGRG 1 cut(s) 1113
BmgT120I GGNCC 6 cut(s) 134, 228, 470, 989, 1306, 1549
BmiI GGNNCC 8 cut(s) 41, 83, 275, 472, 776, 1091, 1233, 1818
BmrFI CCNGG 5 cut(s) 22, 101, 226, 562, 651
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 4 cut(s) 74, 1272, 1383, 1588
BmuI ACTGGG 1 cut(s) 900
BpiI GAAGAC 3 cut(s) 687, 1354, 1648
BpmI CTGGAG 2 cut(s) 1659, 1774
Bpu10I CCTNAGC 3 cut(s) 278, 1693, 1795
Bpu1102I GCTNAGC 1 cut(s) 124
BpuEI CTTGAG 3 cut(s) 19, 689, 827
BpuMI CCSGG 1 cut(s) 562
BsaBI GATNNNNATC 1 cut(s) 364
BsaI GGTCTC 2 cut(s) 1428, 1635
BsaJI CCNNGG 1 cut(s) 100
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 225, 912, 1177
Bse1I ACTGG 3 cut(s) 418, 906, 1827
Bse8I GATNNNNATC 1 cut(s) 364
BseBI CCWGG 4 cut(s) 22, 101, 226, 651
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 2 cut(s) 371, 575
BseJI GATNNNNATC 1 cut(s) 364
BseLI CCNNNNNNNGG 4 cut(s) 49, 225, 912, 1177
BseMII CTCAG 6 cut(s) 292, 390, 703, 1497, 1707, 1809
BseNI ACTGG 3 cut(s) 418, 906, 1827
BseRI GAGGAG 2 cut(s) 467, 1547
BseXI GCAGC 4 cut(s) 688, 691, 1152, 1466
BseYI CCCAGC 3 cut(s) 296, 708, 934
BsgI GTGCAG 1 cut(s) 1151
BshFI GGCC 3 cut(s) 229, 471, 1082
BshNI GGYRCC 2 cut(s) 81, 774
BsiHKAI GWGCWC 1 cut(s) 1596
BsiHKCI CYCGRG 1 cut(s) 1113
BsiSI CCGG 1 cut(s) 561
BslFI GGGAC 1 cut(s) 279
BslI CCNNNNNNNGG 4 cut(s) 49, 225, 912, 1177
BsmAI GTCTC 6 cut(s) 134, 970, 1182, 1428, 1486, 1635
BsmFI GGGAC 1 cut(s) 279
BsmI GAATGC 1 cut(s) 1832
BsnI GGCC 3 cut(s) 229, 471, 1082
Bso31I GGTCTC 2 cut(s) 1428, 1635
BsoBI CYCGRG 1 cut(s) 1113
Bsp1286I GDGCHC 2 cut(s) 567, 1596
Bsp143I GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
Bsp1720I GCTNAGC 1 cut(s) 124
BspACI CCGC 2 cut(s) 528, 1743
BspANI GGCC 3 cut(s) 229, 471, 1082
BspCNI CTCAG 6 cut(s) 291, 391, 702, 1496, 1706, 1808
BspLI GGNNCC 8 cut(s) 41, 83, 275, 472, 776, 1091, 1233, 1818
BspMI ACCTGC 1 cut(s) 1584
BspPI GGATC 8 cut(s) 32, 34, 47, 367, 431, 687, 1079, 1261
BspQI GCTCTTC 1 cut(s) 828
BspT107I GGYRCC 2 cut(s) 81, 774
BspTNI GGTCTC 2 cut(s) 1428, 1635
BsrI ACTGG 3 cut(s) 418, 906, 1827
BssECI CCNNGG 1 cut(s) 100
BssMI GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
Bst2UI CCWGG 4 cut(s) 22, 101, 226, 651
Bst4CI ACNGT 5 cut(s) 638, 730, 738, 1066, 1271
Bst6I CTCTTC 6 cut(s) 391, 828, 1019, 1524, 1532, 1560
BstC8I GCNNGC 2 cut(s) 647, 1326
BstDEI CTNAG 7 cut(s) 124, 278, 399, 689, 1483, 1693, 1795
BstF5I GGATG 2 cut(s) 371, 575
BstHHI GCGC 1 cut(s) 1675
BstKTI GATC 8 cut(s) 27, 42, 362, 439, 695, 921, 1074, 1256
BstMAI GTCTC 6 cut(s) 134, 970, 1182, 1428, 1486, 1635
BstMBI GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
BstMWI GCNNNNNNNGC 3 cut(s) 1126, 1625, 1634
BstNI CCWGG 4 cut(s) 22, 101, 226, 651
BstNSI RCATGY 2 cut(s) 985, 1454
BstSCI CCNGG 5 cut(s) 20, 99, 224, 560, 649
BstSFI CTRYAG 1 cut(s) 726
BstV1I GCAGC 4 cut(s) 688, 691, 1152, 1466
BstV2I GAAGAC 3 cut(s) 687, 1354, 1648
BstX2I RGATCY 4 cut(s) 39, 359, 692, 918
BstXI CCANNNNNNTGG 1 cut(s) 641
BstYI RGATCY 4 cut(s) 39, 359, 692, 918
BsuRI GGCC 3 cut(s) 229, 471, 1082
BtsCI GGATG 2 cut(s) 371, 575
BtsI GCAGTG 2 cut(s) 523, 680
BtsIMutI CAGTG 5 cut(s) 523, 643, 680, 735, 1820
BveI ACCTGC 1 cut(s) 1584
Cac8I GCNNGC 2 cut(s) 647, 1326
CaiI CAGNNNCTG 1 cut(s) 1064
CfoI GCGC 1 cut(s) 1675
Cfr13I GGNCC 6 cut(s) 134, 228, 470, 989, 1306, 1549
Csp6I GTAC 3 cut(s) 82, 945, 1272
CviAII CATG 6 cut(s) 76, 579, 742, 863, 982, 1451
CviQI GTAC 3 cut(s) 82, 945, 1272
DdeI CTNAG 7 cut(s) 124, 278, 399, 689, 1483, 1693, 1795
DpnI GATC 8 cut(s) 26, 41, 361, 438, 694, 920, 1073, 1255
DpnII GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
EaeI YGGCCR 1 cut(s) 1080
Eam1104I CTCTTC 6 cut(s) 391, 828, 1019, 1524, 1532, 1560
EarI CTCTTC 6 cut(s) 391, 828, 1019, 1524, 1532, 1560
Eco24I GRGCYC 1 cut(s) 567
Eco31I GGTCTC 2 cut(s) 1428, 1635
Eco47I GGWCC 4 cut(s) 134, 989, 1306, 1549
Eco57I CTGAAG 2 cut(s) 567, 1584
Eco88I CYCGRG 1 cut(s) 1113
EcoO109I RGGNCCY 1 cut(s) 470
EcoRI GAATTC 1 cut(s) 556
EcoRII CCWGG 4 cut(s) 20, 99, 224, 649
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 567
FaeI CATG 6 cut(s) 79, 582, 745, 866, 985, 1454
FalI AAGNNNNNCTT 2 cut(s) 1492, 1524
FaqI GGGAC 1 cut(s) 279
FatI CATG 6 cut(s) 75, 578, 741, 862, 981, 1450
Fnu4HI GCNGC 5 cut(s) 529, 702, 705, 1166, 1455
FokI GGATG 2 cut(s) 358, 582
FriOI GRGCYC 1 cut(s) 567
Fsp4HI GCNGC 5 cut(s) 529, 702, 705, 1166, 1455
FspBI CTAG 3 cut(s) 390, 1227, 1370
GlaI GCGC 1 cut(s) 1674
GluI GCNGC 5 cut(s) 529, 702, 705, 1166, 1455
GsaI CCCAGC 3 cut(s) 300, 712, 938
GsuI CTGGAG 2 cut(s) 1659, 1774
HaeIII GGCC 3 cut(s) 229, 471, 1082
HapII CCGG 1 cut(s) 561
HhaI GCGC 1 cut(s) 1675
Hin1II CATG 6 cut(s) 79, 582, 745, 866, 985, 1454
Hin6I GCGC 1 cut(s) 1673
HinP1I GCGC 1 cut(s) 1673
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HinfI GANTC 9 cut(s) 5, 53, 91, 142, 202, 383, 1009, 1109, 1223
HpaII CCGG 1 cut(s) 561
HphI GGTGA 4 cut(s) 116, 303, 1529, 1614
Hpy166II GTNNAC 4 cut(s) 193, 311, 409, 1520
Hpy188I TCNGA 7 cut(s) 58, 547, 569, 692, 1060, 1417, 1486
Hpy188III TCNNGA 5 cut(s) 43, 95, 357, 1257, 1378
Hpy8I GTNNAC 4 cut(s) 193, 311, 409, 1520
HpyAV CCTTC 5 cut(s) 103, 470, 1135, 1287, 1412
HpyCH4III ACNGT 5 cut(s) 638, 730, 738, 1066, 1271
HpyCH4IV ACGT 2 cut(s) 1442, 1757
HpyF10VI GCNNNNNNNGC 3 cut(s) 1126, 1625, 1634
HpyF3I CTNAG 7 cut(s) 124, 278, 399, 689, 1483, 1693, 1795
HpySE526I ACGT 2 cut(s) 1442, 1757
Hsp92II CATG 6 cut(s) 79, 582, 745, 866, 985, 1454
HspAI GCGC 1 cut(s) 1673
KpnI GGTACC 1 cut(s) 85
Kzo9I GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 4 cut(s) 273, 1231, 1321, 1591
Lsp1109I GCAGC 4 cut(s) 688, 691, 1152, 1466
LweI GCATC 4 cut(s) 74, 1272, 1383, 1588
MaeI CTAG 3 cut(s) 390, 1227, 1370
MaeII ACGT 2 cut(s) 1442, 1757
MaeIII GTNAC 3 cut(s) 732, 1042, 1571
MalI GATC 8 cut(s) 26, 41, 361, 438, 694, 920, 1073, 1255
MboI GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
MflI RGATCY 4 cut(s) 39, 359, 692, 918
MhlI GDGCHC 2 cut(s) 567, 1596
MlsI TGGCCA 1 cut(s) 1082
MluCI AATT 6 cut(s) 490, 556, 900, 970, 1298, 1729
MluNI TGGCCA 1 cut(s) 1082
MlyI GAGTC 3 cut(s) 136, 196, 377
MmeI TCCRAC 1 cut(s) 281
Mox20I TGGCCA 1 cut(s) 1082
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 837
MscI TGGCCA 1 cut(s) 1082
MslI CAYNNNNRTG 4 cut(s) 639, 1584, 1650, 1825
Msp20I TGGCCA 1 cut(s) 1082
MspA1I CMGCKG 1 cut(s) 938
MspI CCGG 1 cut(s) 561
MspR9I CCNGG 5 cut(s) 22, 101, 226, 562, 651
Mva1269I GAATGC 1 cut(s) 1832
MvaI CCWGG 4 cut(s) 22, 101, 226, 651
MwoI GCNNNNNNNGC 3 cut(s) 1126, 1625, 1634
NciI CCSGG 1 cut(s) 562
NdeII GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
NlaIII CATG 6 cut(s) 79, 582, 745, 866, 985, 1454
NlaIV GGNNCC 8 cut(s) 41, 83, 275, 472, 776, 1091, 1233, 1818
NmuCI GTSAC 2 cut(s) 732, 1571
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 2 cut(s) 985, 1454
PciI ACATGT 1 cut(s) 981
PciSI GCTCTTC 1 cut(s) 828
PctI GAATGC 1 cut(s) 1832
PdmI GAANNNNTTC 1 cut(s) 837
PfeI GAWTC 6 cut(s) 5, 53, 91, 1009, 1109, 1223
PflMI CCANNNNNTGG 2 cut(s) 49, 1177
PkrI GCNGC 5 cut(s) 530, 703, 706, 1167, 1456
PleI GAGTC 3 cut(s) 136, 196, 377
PpsI GAGTC 3 cut(s) 136, 196, 377
PscI ACATGT 1 cut(s) 981
PsiI TTATAA 1 cut(s) 1134
Psp1406I AACGTT 1 cut(s) 1442
Psp6I CCWGG 4 cut(s) 20, 99, 224, 649
PspFI CCCAGC 3 cut(s) 296, 708, 934
PspGI CCWGG 4 cut(s) 20, 99, 224, 649
PspN4I GGNNCC 8 cut(s) 41, 83, 275, 472, 776, 1091, 1233, 1818
PspPI GGNCC 6 cut(s) 134, 228, 470, 989, 1306, 1549
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 4 cut(s) 39, 359, 692, 918
PvuII CAGCTG 1 cut(s) 938
RsaI GTAC 3 cut(s) 83, 946, 1273
RsaNI GTAC 3 cut(s) 82, 945, 1272
RseI CAYNNNNRTG 4 cut(s) 639, 1584, 1650, 1825
SapI GCTCTTC 1 cut(s) 828
SatI GCNGC 5 cut(s) 529, 702, 705, 1166, 1455
Sau3AI GATC 8 cut(s) 24, 39, 359, 436, 692, 918, 1071, 1253
Sau96I GGNCC 6 cut(s) 134, 228, 470, 989, 1306, 1549
SchI GAGTC 3 cut(s) 136, 196, 377
ScrFI CCNGG 5 cut(s) 22, 101, 226, 562, 651
SduI GDGCHC 2 cut(s) 567, 1596
SfaNI GCATC 4 cut(s) 74, 1272, 1383, 1588
SfcI CTRYAG 1 cut(s) 726
SinI GGWCC 4 cut(s) 134, 989, 1306, 1549
SmiMI CAYNNNNRTG 4 cut(s) 639, 1584, 1650, 1825
SmlI CTYRAG 3 cut(s) 34, 668, 842
SmoI CTYRAG 3 cut(s) 34, 668, 842
Sse9I AATT 6 cut(s) 490, 556, 900, 970, 1298, 1729
SsiI CCGC 2 cut(s) 528, 1743
SspMI CTAG 3 cut(s) 390, 1227, 1370
StyD4I CCNGG 5 cut(s) 20, 99, 224, 560, 649
TaaI ACNGT 5 cut(s) 638, 730, 738, 1066, 1271
TaiI ACGT 2 cut(s) 1445, 1760
TaqI TCGA 4 cut(s) 302, 462, 497, 881
TasI AATT 6 cut(s) 490, 556, 900, 970, 1298, 1729
TatI WGTACW 1 cut(s) 944
TauI GCSGC 1 cut(s) 531
TfiI GAWTC 6 cut(s) 5, 53, 91, 1009, 1109, 1223
TscAI CASTG 5 cut(s) 530, 643, 680, 735, 1827
TseFI GTSAC 2 cut(s) 732, 1571
TseI GCWGC 4 cut(s) 701, 704, 1165, 1454
Tsp45I GTSAC 2 cut(s) 732, 1571
TspDTI ATGAA 4 cut(s) 237, 515, 730, 1698
TspGWI ACGGA 3 cut(s) 461, 627, 1771
TspRI CASTG 5 cut(s) 530, 643, 680, 735, 1827
Van91I CCANNNNNTGG 2 cut(s) 49, 1177
VpaK11BI GGWCC 4 cut(s) 134, 989, 1306, 1549
XapI RAATTY 1 cut(s) 556
XceI RCATGY 2 cut(s) 985, 1454
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 837
XspI CTAG 3 cut(s) 390, 1227, 1370
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.