zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1134 |
| Acc65I | GGTACC | 1 cut(s) | 81 |
| AccB1I | GGYRCC | 1 cut(s) | 81 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 49, 1177 |
| AciI | CCGC | 1 cut(s) | 528 |
| AclI | AACGTT | 1 cut(s) | 1442 |
| AclWI | GGATC | 7 cut(s) | 34, 47, 431, 687, 1079, 1261, 1429 |
| AcoI | YGGCCR | 2 cut(s) | 1080, 1713 |
| AcsI | RAATTY | 1 cut(s) | 556 |
| AcuI | CTGAAG | 3 cut(s) | 495, 567, 1590 |
| AfaI | GTAC | 3 cut(s) | 83, 946, 1273 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 49, 225, 912, 1177, 1722 |
| AflIII | ACRYGT | 1 cut(s) | 981 |
| AgsI | TTSAA | 8 cut(s) | 95, 214, 912, 979, 1206, 1246, 1334, 1364 |
| AjnI | CCWGG | 3 cut(s) | 99, 224, 649 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 14, 46 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 440, 472, 565, 597 |
| Alw21I | GWGCWC | 1 cut(s) | 1602 |
| Alw26I | GTCTC | 5 cut(s) | 782, 970, 1182, 1486, 1638 |
| AlwI | GGATC | 7 cut(s) | 34, 47, 431, 687, 1079, 1261, 1429 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1064, 1640 |
| Ama87I | CYCGRG | 1 cut(s) | 1113 |
| AoxI | GGCC | 6 cut(s) | 227, 469, 563, 1080, 1372, 1713 |
| ApaI | GGGCCC | 1 cut(s) | 567 |
| ApeKI | GCWGC | 3 cut(s) | 701, 704, 725 |
| ApoI | RAATTY | 1 cut(s) | 556 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 837 |
| Asp718I | GGTACC | 1 cut(s) | 81 |
| AspS9I | GGNCC | 8 cut(s) | 134, 228, 470, 563, 564, 989, 1306, 1555 |
| AsuC2I | CCSGG | 2 cut(s) | 562, 567 |
| AsuHPI | GGTGA | 6 cut(s) | 116, 303, 1446, 1535, 1620, 1808 |
| AvaI | CYCGRG | 1 cut(s) | 1113 |
| AvaII | GGWCC | 4 cut(s) | 134, 989, 1306, 1555 |
| BaeGI | GKGCMC | 1 cut(s) | 567 |
| BalI | TGGCCA | 1 cut(s) | 1082 |
| BamHI | GGATCC | 1 cut(s) | 39 |
| BanI | GGYRCC | 1 cut(s) | 81 |
| BanII | GRGCYC | 1 cut(s) | 567 |
| BbsI | GAAGAC | 2 cut(s) | 449, 1354 |
| Bbv12I | GWGCWC | 1 cut(s) | 1602 |
| BbvCI | CCTCAGC | 1 cut(s) | 278 |
| BbvI | GCAGC | 3 cut(s) | 688, 691, 712 |
| BceAI | ACGGC | 1 cut(s) | 609 |
| BciT130I | CCWGG | 3 cut(s) | 101, 226, 651 |
| BcnI | CCSGG | 2 cut(s) | 562, 567 |
| BcoDI | GTCTC | 5 cut(s) | 782, 970, 1182, 1486, 1638 |
| BfaI | CTAG | 3 cut(s) | 390, 1227, 1370 |
| BfmI | CTRYAG | 1 cut(s) | 726 |
| BglII | AGATCT | 2 cut(s) | 918, 1802 |
| BisI | GCNGC | 3 cut(s) | 702, 705, 726 |
| BlsI | GCNGC | 3 cut(s) | 703, 706, 727 |
| Bme1390I | CCNGG | 5 cut(s) | 101, 226, 562, 567, 651 |
| Bme18I | GGWCC | 4 cut(s) | 134, 989, 1306, 1555 |
| BmeT110I | CYCGRG | 1 cut(s) | 1113 |
| BmgT120I | GGNCC | 8 cut(s) | 134, 228, 470, 563, 564, 989, 1306, 1555 |
| BmiI | GGNNCC | 8 cut(s) | 41, 83, 275, 565, 1091, 1233, 1681, 1761 |
| BmrFI | CCNGG | 5 cut(s) | 101, 226, 562, 567, 651 |
| BmrI | ACTGGG | 2 cut(s) | 191, 900 |
| BmsI | GCATC | 2 cut(s) | 74, 1272 |
| BmuI | ACTGGG | 2 cut(s) | 191, 900 |
| BpiI | GAAGAC | 2 cut(s) | 449, 1354 |
| BpmI | CTGGAG | 1 cut(s) | 1662 |
| Bpu10I | CCTNAGC | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 3 cut(s) | 19, 689, 1361 |
| BpuMI | CCSGG | 2 cut(s) | 562, 567 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1818 |
| BsaI | GGTCTC | 1 cut(s) | 1638 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 49, 225, 912, 1177, 1722 |
| Bse118I | RCCGGY | 1 cut(s) | 1715 |
| Bse1I | ACTGG | 4 cut(s) | 186, 418, 906, 1690 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1818 |
| BseBI | CCWGG | 3 cut(s) | 101, 226, 651 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseGI | GGATG | 2 cut(s) | 371, 575 |
| BseJI | GATNNNNATC | 1 cut(s) | 1818 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 49, 225, 912, 1177, 1722 |
| BseMII | CTCAG | 7 cut(s) | 292, 390, 703, 1497, 1506, 1672, 1745 |
| BseNI | ACTGG | 4 cut(s) | 186, 418, 906, 1690 |
| BseRI | GAGGAG | 2 cut(s) | 467, 1553 |
| BseSI | GKGCMC | 1 cut(s) | 567 |
| BseXI | GCAGC | 3 cut(s) | 688, 691, 712 |
| BseYI | CCCAGC | 4 cut(s) | 296, 708, 934, 1743 |
| BshFI | GGCC | 6 cut(s) | 229, 471, 565, 1082, 1374, 1715 |
| BshNI | GGYRCC | 1 cut(s) | 81 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1602 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1113 |
| BsiSI | CCGG | 3 cut(s) | 561, 567, 1716 |
| BslFI | GGGAC | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 49, 225, 912, 1177, 1722 |
| BsmAI | GTCTC | 5 cut(s) | 782, 970, 1182, 1486, 1638 |
| BsmFI | GGGAC | 1 cut(s) | 279 |
| BsmI | GAATGC | 1 cut(s) | 1695 |
| BsnI | GGCC | 6 cut(s) | 229, 471, 565, 1082, 1374, 1715 |
| Bso31I | GGTCTC | 1 cut(s) | 1638 |
| BsoBI | CYCGRG | 1 cut(s) | 1113 |
| Bsp120I | GGGCCC | 1 cut(s) | 563 |
| Bsp1286I | GDGCHC | 2 cut(s) | 567, 1602 |
| BspACI | CCGC | 1 cut(s) | 528 |
| BspANI | GGCC | 6 cut(s) | 229, 471, 565, 1082, 1374, 1715 |
| BspCNI | CTCAG | 7 cut(s) | 291, 391, 702, 1496, 1505, 1671, 1744 |
| BspHI | TCATGA | 1 cut(s) | 1353 |
| BspLI | GGNNCC | 8 cut(s) | 41, 83, 275, 565, 1091, 1233, 1681, 1761 |
| BspMAI | CTGCAG | 1 cut(s) | 730 |
| BspPI | GGATC | 7 cut(s) | 34, 47, 431, 687, 1079, 1261, 1429 |
| BspQI | GCTCTTC | 1 cut(s) | 828 |
| BspT107I | GGYRCC | 1 cut(s) | 81 |
| BspTNI | GGTCTC | 1 cut(s) | 1638 |
| BsrFI | RCCGGY | 1 cut(s) | 1715 |
| BsrI | ACTGG | 4 cut(s) | 186, 418, 906, 1690 |
| BssAI | RCCGGY | 1 cut(s) | 1715 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 3 cut(s) | 101, 226, 651 |
| Bst4CI | ACNGT | 4 cut(s) | 738, 752, 1066, 1271 |
| Bst6I | CTCTTC | 6 cut(s) | 391, 828, 1019, 1530, 1538, 1566 |
| BstC8I | GCNNGC | 2 cut(s) | 647, 1326 |
| BstDEI | CTNAG | 9 cut(s) | 278, 399, 689, 1483, 1492, 1658, 1697, 1731, 1806 |
| BstF5I | GGATG | 2 cut(s) | 371, 575 |
| BstMAI | GTCTC | 5 cut(s) | 782, 970, 1182, 1486, 1638 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1126, 1631 |
| BstNI | CCWGG | 3 cut(s) | 101, 226, 651 |
| BstNSI | RCATGY | 1 cut(s) | 985 |
| BstSCI | CCNGG | 5 cut(s) | 99, 224, 560, 565, 649 |
| BstSFI | CTRYAG | 1 cut(s) | 726 |
| BstSLI | GKGCMC | 1 cut(s) | 567 |
| BstV1I | GCAGC | 3 cut(s) | 688, 691, 712 |
| BstV2I | GAAGAC | 2 cut(s) | 449, 1354 |
| BstX2I | RGATCY | 5 cut(s) | 39, 692, 918, 1421, 1802 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 641 |
| BstYI | RGATCY | 5 cut(s) | 39, 692, 918, 1421, 1802 |
| BsuRI | GGCC | 6 cut(s) | 229, 471, 565, 1082, 1374, 1715 |
| BtsCI | GGATG | 2 cut(s) | 371, 575 |
| BtsI | GCAGTG | 3 cut(s) | 523, 680, 735 |
| BtsIMutI | CAGTG | 4 cut(s) | 523, 680, 735, 1683 |
| Cac8I | GCNNGC | 2 cut(s) | 647, 1326 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1064, 1640 |
| CciI | TCATGA | 1 cut(s) | 1353 |
| Cfr10I | RCCGGY | 1 cut(s) | 1715 |
| Cfr13I | GGNCC | 8 cut(s) | 134, 228, 470, 563, 564, 989, 1306, 1555 |
| Csp6I | GTAC | 3 cut(s) | 82, 945, 1272 |
| CviAII | CATG | 7 cut(s) | 76, 579, 742, 863, 982, 1354, 1711 |
| CviQI | GTAC | 3 cut(s) | 82, 945, 1272 |
| DdeI | CTNAG | 9 cut(s) | 278, 399, 689, 1483, 1492, 1658, 1697, 1731, 1806 |
| EaeI | YGGCCR | 2 cut(s) | 1080, 1713 |
| Eam1104I | CTCTTC | 6 cut(s) | 391, 828, 1019, 1530, 1538, 1566 |
| EarI | CTCTTC | 6 cut(s) | 391, 828, 1019, 1530, 1538, 1566 |
| Eco147I | AGGCCT | 1 cut(s) | 1374 |
| Eco24I | GRGCYC | 1 cut(s) | 567 |
| Eco31I | GGTCTC | 1 cut(s) | 1638 |
| Eco47I | GGWCC | 4 cut(s) | 134, 989, 1306, 1555 |
| Eco57I | CTGAAG | 3 cut(s) | 495, 567, 1590 |
| Eco88I | CYCGRG | 1 cut(s) | 1113 |
| EcoO109I | RGGNCCY | 1 cut(s) | 470 |
| EcoRI | GAATTC | 1 cut(s) | 556 |
| EcoRII | CCWGG | 3 cut(s) | 99, 224, 649 |
| EcoT22I | ATGCAT | 1 cut(s) | 67 |
| EcoT38I | GRGCYC | 1 cut(s) | 567 |
| FaeI | CATG | 7 cut(s) | 79, 582, 745, 866, 985, 1357, 1714 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1498, 1530 |
| FaqI | GGGAC | 1 cut(s) | 279 |
| FatI | CATG | 7 cut(s) | 75, 578, 741, 862, 981, 1353, 1710 |
| FauI | CCCGC | 1 cut(s) | 521 |
| Fnu4HI | GCNGC | 3 cut(s) | 702, 705, 726 |
| FokI | GGATG | 2 cut(s) | 358, 582 |
| FriOI | GRGCYC | 1 cut(s) | 567 |
| Fsp4HI | GCNGC | 3 cut(s) | 702, 705, 726 |
| FspBI | CTAG | 3 cut(s) | 390, 1227, 1370 |
| GluI | GCNGC | 3 cut(s) | 702, 705, 726 |
| GsaI | CCCAGC | 4 cut(s) | 300, 712, 938, 1747 |
| GsuI | CTGGAG | 1 cut(s) | 1662 |
| HaeIII | GGCC | 6 cut(s) | 229, 471, 565, 1082, 1374, 1715 |
| HapII | CCGG | 3 cut(s) | 561, 567, 1716 |
| Hin1II | CATG | 7 cut(s) | 79, 582, 745, 866, 985, 1357, 1714 |
| HincII | GTYRAC | 1 cut(s) | 409 |
| HindII | GTYRAC | 1 cut(s) | 409 |
| HinfI | GANTC | 8 cut(s) | 5, 53, 91, 383, 1009, 1109, 1223, 1350 |
| HpaII | CCGG | 3 cut(s) | 561, 567, 1716 |
| HphI | GGTGA | 6 cut(s) | 116, 303, 1446, 1535, 1620, 1808 |
| Hpy166II | GTNNAC | 4 cut(s) | 193, 311, 409, 1526 |
| Hpy188I | TCNGA | 7 cut(s) | 58, 441, 547, 692, 1060, 1486, 1734 |
| Hpy188III | TCNNGA | 6 cut(s) | 43, 95, 1257, 1354, 1378, 1416 |
| Hpy8I | GTNNAC | 4 cut(s) | 193, 311, 409, 1526 |
| HpyAV | CCTTC | 4 cut(s) | 103, 470, 1135, 1287 |
| HpyCH4III | ACNGT | 4 cut(s) | 738, 752, 1066, 1271 |
| HpyCH4IV | ACGT | 1 cut(s) | 1442 |
| HpyCH4V | TGCA | 6 cut(s) | 65, 593, 728, 793, 997, 1693 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1126, 1631 |
| HpyF3I | CTNAG | 9 cut(s) | 278, 399, 689, 1483, 1492, 1658, 1697, 1731, 1806 |
| HpySE526I | ACGT | 1 cut(s) | 1442 |
| Hsp92II | CATG | 7 cut(s) | 79, 582, 745, 866, 985, 1357, 1714 |
| KpnI | GGTACC | 1 cut(s) | 85 |
| LguI | GCTCTTC | 1 cut(s) | 828 |
| LmnI | GCTCC | 6 cut(s) | 273, 305, 1231, 1321, 1597, 1759 |
| Lsp1109I | GCAGC | 3 cut(s) | 688, 691, 712 |
| LweI | GCATC | 2 cut(s) | 74, 1272 |
| MaeI | CTAG | 3 cut(s) | 390, 1227, 1370 |
| MaeII | ACGT | 1 cut(s) | 1442 |
| MaeIII | GTNAC | 4 cut(s) | 732, 1042, 1577, 1726 |
| MflI | RGATCY | 5 cut(s) | 39, 692, 918, 1421, 1802 |
| MhlI | GDGCHC | 2 cut(s) | 567, 1602 |
| MlsI | TGGCCA | 1 cut(s) | 1082 |
| MluCI | AATT | 6 cut(s) | 490, 556, 900, 970, 1298, 1752 |
| MluNI | TGGCCA | 1 cut(s) | 1082 |
| MlyI | GAGTC | 2 cut(s) | 377, 1344 |
| MmeI | TCCRAC | 3 cut(s) | 281, 771, 1775 |
| Mox20I | TGGCCA | 1 cut(s) | 1082 |
| Mph1103I | ATGCAT | 1 cut(s) | 67 |
| MroXI | GAANNNNTTC | 1 cut(s) | 837 |
| MscI | TGGCCA | 1 cut(s) | 1082 |
| MseI | TTAA | 1 cut(s) | 1828 |
| MslI | CAYNNNNRTG | 3 cut(s) | 639, 1590, 1688 |
| Msp20I | TGGCCA | 1 cut(s) | 1082 |
| MspA1I | CMGCKG | 1 cut(s) | 938 |
| MspI | CCGG | 3 cut(s) | 561, 567, 1716 |
| MspR9I | CCNGG | 5 cut(s) | 101, 226, 562, 567, 651 |
| Mva1269I | GAATGC | 1 cut(s) | 1695 |
| MvaI | CCWGG | 3 cut(s) | 101, 226, 651 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1126, 1631 |
| NciI | CCSGG | 2 cut(s) | 562, 567 |
| NlaIII | CATG | 7 cut(s) | 79, 582, 745, 866, 985, 1357, 1714 |
| NlaIV | GGNNCC | 8 cut(s) | 41, 83, 275, 565, 1091, 1233, 1681, 1761 |
| NmuCI | GTSAC | 2 cut(s) | 732, 1577 |
| NsiI | ATGCAT | 1 cut(s) | 67 |
| NspI | RCATGY | 1 cut(s) | 985 |
| PagI | TCATGA | 1 cut(s) | 1353 |
| PceI | AGGCCT | 1 cut(s) | 1374 |
| PciI | ACATGT | 1 cut(s) | 981 |
| PciSI | GCTCTTC | 1 cut(s) | 828 |
| PctI | GAATGC | 1 cut(s) | 1695 |
| PdmI | GAANNNNTTC | 1 cut(s) | 837 |
| PfeI | GAWTC | 6 cut(s) | 5, 53, 91, 1009, 1109, 1223 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 49, 1177 |
| PkrI | GCNGC | 3 cut(s) | 703, 706, 727 |
| PleI | GAGTC | 2 cut(s) | 377, 1344 |
| PpsI | GAGTC | 2 cut(s) | 377, 1344 |
| PscI | ACATGT | 1 cut(s) | 981 |
| PsiI | TTATAA | 1 cut(s) | 1134 |
| Psp1406I | AACGTT | 1 cut(s) | 1442 |
| Psp6I | CCWGG | 3 cut(s) | 99, 224, 649 |
| PspFI | CCCAGC | 4 cut(s) | 296, 708, 934, 1743 |
| PspGI | CCWGG | 3 cut(s) | 99, 224, 649 |
| PspN4I | GGNNCC | 8 cut(s) | 41, 83, 275, 565, 1091, 1233, 1681, 1761 |
| PspOMI | GGGCCC | 1 cut(s) | 563 |
| PspPI | GGNCC | 8 cut(s) | 134, 228, 470, 563, 564, 989, 1306, 1555 |
| PstI | CTGCAG | 1 cut(s) | 730 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1064, 1640 |
| PsuI | RGATCY | 5 cut(s) | 39, 692, 918, 1421, 1802 |
| PvuII | CAGCTG | 1 cut(s) | 938 |
| RsaI | GTAC | 3 cut(s) | 83, 946, 1273 |
| RsaNI | GTAC | 3 cut(s) | 82, 945, 1272 |
| RseI | CAYNNNNRTG | 3 cut(s) | 639, 1590, 1688 |
| SapI | GCTCTTC | 1 cut(s) | 828 |
| SaqAI | TTAA | 1 cut(s) | 1828 |
| SatI | GCNGC | 3 cut(s) | 702, 705, 726 |
| Sau96I | GGNCC | 8 cut(s) | 134, 228, 470, 563, 564, 989, 1306, 1555 |
| SchI | GAGTC | 2 cut(s) | 377, 1344 |
| ScrFI | CCNGG | 5 cut(s) | 101, 226, 562, 567, 651 |
| SduI | GDGCHC | 2 cut(s) | 567, 1602 |
| SfaNI | GCATC | 2 cut(s) | 74, 1272 |
| SfcI | CTRYAG | 1 cut(s) | 726 |
| SinI | GGWCC | 4 cut(s) | 134, 989, 1306, 1555 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 639, 1590, 1688 |
| SmlI | CTYRAG | 3 cut(s) | 34, 668, 1376 |
| SmoI | CTYRAG | 3 cut(s) | 34, 668, 1376 |
| Sse9I | AATT | 6 cut(s) | 490, 556, 900, 970, 1298, 1752 |
| SseBI | AGGCCT | 1 cut(s) | 1374 |
| SsiI | CCGC | 1 cut(s) | 528 |
| SspI | AATATT | 1 cut(s) | 1360 |
| SspMI | CTAG | 3 cut(s) | 390, 1227, 1370 |
| StuI | AGGCCT | 1 cut(s) | 1374 |
| StyD4I | CCNGG | 5 cut(s) | 99, 224, 560, 565, 649 |
| TaaI | ACNGT | 4 cut(s) | 738, 752, 1066, 1271 |
| TaiI | ACGT | 1 cut(s) | 1445 |
| TaqI | TCGA | 3 cut(s) | 462, 497, 881 |
| TasI | AATT | 6 cut(s) | 490, 556, 900, 970, 1298, 1752 |
| TatI | WGTACW | 1 cut(s) | 944 |
| TfiI | GAWTC | 6 cut(s) | 5, 53, 91, 1009, 1109, 1223 |
| Tru1I | TTAA | 1 cut(s) | 1828 |
| Tru9I | TTAA | 1 cut(s) | 1828 |
| TscAI | CASTG | 4 cut(s) | 530, 680, 735, 1690 |
| TseFI | GTSAC | 2 cut(s) | 732, 1577 |
| TseI | GCWGC | 3 cut(s) | 701, 704, 725 |
| Tsp45I | GTSAC | 2 cut(s) | 732, 1577 |
| TspDTI | ATGAA | 4 cut(s) | 237, 515, 730, 1370 |
| TspGWI | ACGGA | 1 cut(s) | 461 |
| TspRI | CASTG | 4 cut(s) | 530, 680, 735, 1690 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 49, 1177 |
| VpaK11BI | GGWCC | 4 cut(s) | 134, 989, 1306, 1555 |
| XapI | RAATTY | 1 cut(s) | 556 |
| XceI | RCATGY | 1 cut(s) | 985 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 178 |
| XmnI | GAANNNNTTC | 1 cut(s) | 837 |
| XspI | CTAG | 3 cut(s) | 390, 1227, 1370 |
| Zsp2I | ATGCAT | 1 cut(s) | 67 |