Rroxscaffold_4G00328730

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001189
Physical Location & Seq
Reverse (-)
61810324 .. 61815045
4722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328730.1

Sequence Viewer

Length: 2121 bp
ATGGATTCCTATGAAGCTACAAGGATTGTGTTCTCAAGGATCACAAACTTGGACCCAGAAAATGCTTCCAAAATCATGGGTCTTCTTCTAATCCAAGACCATGGAGAGAAGGAGATGATACGATTAGCTTTCGGCCCCGAGGCGTTTCTCCACTCTGTGATTCTCAAGGCCCGGAAGGACTTGGGACTAATGCCCATATCCAACTCTCCATCCACACCCACCACACCTTCTTCTCCGTCGCCTTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAGAACTCTGCTTCCTCTAGGCTATCTCTCACTATACCAAACCCATCTTCTTCTGCTTCTACTTGGGCTGCTCTGTCTTCCGAGCTTCGAAACCAAGACGAGAGTATGATGATGAGTCCCAACAACGTGGCTCCTAACGTGTCTTCTTCTTCATCTTCCATGATGAATTCGTCTCTACCCTTTTTCGGAAACGGTGGACCCGACCATGTGCTTGAGGAGTTTCAGCTTCAGGAGCAGCTCTCTTTTCTCAACGATGGAGCTCCTAAATCCCCTGATTTGTTTTACCCCCAGTCGGACTTGTCTTCCAGCCCAACTAATGGTTCTGATCAGACCCTTTTCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTCACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCTGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATCGGGGACTTGGGTTCAGATGGTGCTCCACTTGTTGGTTCACCAAACAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCTAAGTGCATGAACTTCCTTCTTCAGCAGCAACAAACTGATGCCCAGAGGGCTGCTGCAGCCTTGATGATGGGTGATGATATCCACAAATTTAGTCGATCTCCTCGGATGGAAAGGAACGAGTTTACAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCAAATTACTTCAGCATTTACGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCTTATTTTGGCCAAAGGGAACCCTCATTTTGTGTGTGATGCTAGGGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGTACAGGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGTACACCTACTGGCCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGATGTTTTACAACTCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCTGAGCTTCAGCAAGCACTTGAACTTCAAAGCCGAAGGCTAATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCTAGCAGTCCGATTAATTCTCCTACTCAGTCCCCCAAGAACTGCTCTAGTCCGGTGCCACCCATTTCTTCAGCTCTGGCAGCAGACCAGCAGCCTCAGGTGGCAGCAACCGTTGCTACAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGTGGCAAGGAAAGCCCCCATGATGACGATGTCAGTGGTTTGCTAGGAAGCTTGGAGCACAACCTCCCCGACAGCCCTTTTGCTTCTCCAACAAAAGGAGCCCGGGATTACTTGTCTGCATTCCCGGTCGCGGCCAGTGAGGCCAATGATTCATCTGATGCCTCAGCTGCAACAGCTAACATTAACTTGGCTACTTCCCTACTGCCAGCCACTTCCTCACTGGACATGGCATCTTTCAAGTCCTTTAACTGCCAAATTCCAAGGTTGTCTTCCGGCCATGGAGCCATAGGGATGTATGCCGCCGGCGCAGGGGGGCCAAAATGCCCGGTTGGAACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

706

Amino Acids

75.98

Weight (kDa)

6.19

Isoelectric Point (pI)

58.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 64 4.1e-33 AtC3H46 PABC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1678, 1757
AccB7I CCANNNNNTGG 3 cut(s) 593, 830, 934
AccII CGCG 1 cut(s) 1910
AciI CCGC 4 cut(s) 645, 664, 1910, 2079
AclWI GGATC 2 cut(s) 47, 882
AcoI YGGCCR 3 cut(s) 1299, 1911, 2053
AcsI RAATTY 5 cut(s) 442, 706, 1052, 1227, 2034
AcuI CTGAAG 5 cut(s) 488, 971, 1180, 1523, 1677
AdeI CACNNNGTG 2 cut(s) 157, 1421
AfaI GTAC 5 cut(s) 737, 752, 1274, 1382, 1426
AflIII ACRYGT 3 cut(s) 414, 1182, 1500
AgsI TTSAA 4 cut(s) 1217, 1553, 1559, 2017
AjiI CACGTC 1 cut(s) 1183
AloI GAACNNNNNNTCC 2 cut(s) 272, 304
Alw21I GWGCWC 4 cut(s) 538, 823, 1618, 1839
Alw26I GTCTC 3 cut(s) 453, 1274, 1443
AlwI GGATC 2 cut(s) 47, 882
Ama87I CYCGRG 2 cut(s) 137, 1881
AoxI GGCC 9 cut(s) 133, 168, 936, 1299, 1435, 1911, 1920, 2053, 2093
ApoI RAATTY 5 cut(s) 442, 706, 1052, 1227, 2034
ArsI GACNNNNNNTTYG 2 cut(s) 1841, 1873
AseI ATTAAT 1 cut(s) 1638
Asp700I GAANNNNTTC 1 cut(s) 879
AspLEI GCGC 1 cut(s) 2087
AspS9I GGNCC 7 cut(s) 52, 134, 169, 473, 859, 1208, 2093
AsuC2I CCSGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
AsuHPI GGTGA 6 cut(s) 653, 828, 1049, 1129, 1407, 1598
AsuII TTCGAA 1 cut(s) 364
AsuNHI GCTAGC 1 cut(s) 1625
AvaI CYCGRG 2 cut(s) 137, 1881
AvaII GGWCC 4 cut(s) 52, 473, 859, 1208
AxyI CCTNAGG 1 cut(s) 1719
BalI TGGCCA 1 cut(s) 1301
BanI GGYRCC 2 cut(s) 1678, 1757
BanII GRGCYC 4 cut(s) 538, 658, 1618, 1882
BbsI GAAGAC 7 cut(s) 74, 345, 411, 570, 705, 1185, 2040
Bbv12I GWGCWC 4 cut(s) 538, 823, 1618, 1839
BbvCI CCTCAGC 2 cut(s) 940, 1942
BccI CCATC 9 cut(s) 217, 328, 524, 809, 850, 1027, 1066, 1108, 1436
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
BcoDI GTCTC 3 cut(s) 453, 1274, 1443
BfaI CTAG 9 cut(s) 294, 744, 768, 1332, 1469, 1476, 1626, 1671, 1823
BfmI CTRYAG 5 cut(s) 772, 918, 1020, 1580, 1740
BglI GCCNNNNNGGC 2 cut(s) 1013, 1919
BlpI GCTNAGC 1 cut(s) 1533
Bme1390I CCNGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
Bme18I GGWCC 4 cut(s) 52, 473, 859, 1208
BmeT110I CYCGRG 2 cut(s) 137, 1881
BmgBI CACGTC 1 cut(s) 1183
BmgT120I GGNCC 7 cut(s) 52, 134, 169, 473, 859, 1208, 2093
BmrFI CCNGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
BmrI ACTGGG 2 cut(s) 559, 649
BmsI GCATC 5 cut(s) 994, 1318, 1612, 1927, 2018
BmtI GCTAGC 1 cut(s) 1629
BmuI ACTGGG 2 cut(s) 559, 649
BpiI GAAGAC 7 cut(s) 74, 345, 411, 570, 705, 1185, 2040
BplI GAGNNNNNCTC 2 cut(s) 500, 532
BpmI CTGGAG 2 cut(s) 1448, 1541
Bpu10I CCTNAGC 2 cut(s) 940, 1942
Bpu1102I GCTNAGC 1 cut(s) 1533
Bpu14I TTCGAA 1 cut(s) 364
BpuEI CTTGAG 6 cut(s) 19, 149, 509, 869, 1114, 1479
BpuMI CCSGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
BsaI GGTCTC 1 cut(s) 1443
BsaJI CCNNGG 6 cut(s) 100, 138, 1067, 1881, 2039, 2056
BsaWI WCCGGW 1 cut(s) 1675
BsaXI ACNNNNNCTCC 2 cut(s) 614, 644
Bse118I RCCGGY 1 cut(s) 2081
Bse1I ACTGG 7 cut(s) 565, 644, 862, 918, 1438, 1914, 2004
Bse21I CCTNAGG 1 cut(s) 1719
BseDI CCNNGG 6 cut(s) 100, 138, 1067, 1881, 2039, 2056
BseGI GGATG 6 cut(s) 209, 1077, 1119, 1254, 1485, 2076
BseMII CTCAG 6 cut(s) 898, 954, 1524, 1664, 1733, 1956
BseNI ACTGG 7 cut(s) 565, 644, 862, 918, 1438, 1914, 2004
BseRI GAGGAG 7 cut(s) 506, 607, 952, 1056, 1419, 1525, 1538
BseYI CCCAGC 3 cut(s) 927, 1109, 1123
Bsh1236I CGCG 1 cut(s) 1910
Bsh1285I CGRYCG 1 cut(s) 1908
BshFI GGCC 9 cut(s) 135, 170, 938, 1301, 1437, 1913, 1922, 2055, 2095
BshNI GGYRCC 2 cut(s) 1678, 1757
BsiEI CGRYCG 1 cut(s) 1908
BsiHKAI GWGCWC 4 cut(s) 538, 823, 1618, 1839
BsiHKCI CYCGRG 2 cut(s) 137, 1881
BslFI GGGAC 4 cut(s) 198, 378, 815, 1639
BsmAI GTCTC 3 cut(s) 453, 1274, 1443
BsmBI CGTCTC 1 cut(s) 453
BsmFI GGGAC 4 cut(s) 198, 378, 815, 1639
BsmI GAATGC 1 cut(s) 1898
BsnI GGCC 9 cut(s) 135, 170, 938, 1301, 1437, 1913, 1922, 2055, 2095
Bso31I GGTCTC 1 cut(s) 1443
BsoBI CYCGRG 2 cut(s) 137, 1881
Bsp119I TTCGAA 1 cut(s) 364
Bsp1286I GDGCHC 6 cut(s) 538, 658, 823, 1618, 1839, 1882
Bsp143I GATC 5 cut(s) 39, 601, 887, 1061, 1459
Bsp1720I GCTNAGC 1 cut(s) 1533
Bsp19I CCATGG 2 cut(s) 100, 2056
BspACI CCGC 4 cut(s) 645, 664, 1910, 2079
BspANI GGCC 9 cut(s) 135, 170, 938, 1301, 1437, 1913, 1922, 2055, 2095
BspCNI CTCAG 6 cut(s) 897, 953, 1525, 1663, 1732, 1955
BspFNI CGCG 1 cut(s) 1910
BspMAI CTGCAG 3 cut(s) 922, 1024, 1584
BspOI GCTAGC 1 cut(s) 1629
BspPI GGATC 2 cut(s) 47, 882
BspQI GCTCTTC 1 cut(s) 663
BspT104I TTCGAA 1 cut(s) 364
BspT107I GGYRCC 2 cut(s) 1678, 1757
BspTNI GGTCTC 1 cut(s) 1443
BsrFI RCCGGY 1 cut(s) 2081
BsrI ACTGG 7 cut(s) 565, 644, 862, 918, 1438, 1914, 2004
BssAI RCCGGY 1 cut(s) 2081
BssECI CCNNGG 6 cut(s) 100, 138, 1067, 1881, 2039, 2056
BssMI GATC 5 cut(s) 39, 601, 887, 1061, 1459
BssT1I CCWWGG 3 cut(s) 100, 2039, 2056
Bst4CI ACNGT 7 cut(s) 470, 626, 1103, 1285, 1735, 1766, 1775
Bst6I CTCTTC 2 cut(s) 663, 1238
BstAPI GCANNNNNTGC 1 cut(s) 1736
BstBI TTCGAA 1 cut(s) 364
BstC8I GCNNGC 5 cut(s) 1530, 1545, 1627, 1986, 2083
BstDEI CTNAG 7 cut(s) 884, 940, 966, 1533, 1650, 1719, 1942
BstDSI CCRYGG 2 cut(s) 100, 2056
BstF5I GGATG 6 cut(s) 209, 1077, 1119, 1254, 1485, 2076
BstFNI CGCG 1 cut(s) 1910
BstHHI GCGC 1 cut(s) 2087
BstKTI GATC 5 cut(s) 42, 604, 890, 1064, 1462
BstMAI GTCTC 3 cut(s) 453, 1274, 1443
BstMBI GATC 5 cut(s) 39, 601, 887, 1061, 1459
BstMCI CGRYCG 1 cut(s) 1908
BstNSI RCATGY 1 cut(s) 1504
BstSCI CCNGG 7 cut(s) 170, 632, 1275, 1880, 1881, 1902, 2103
BstSFI CTRYAG 5 cut(s) 772, 918, 1020, 1580, 1740
BstUI CGCG 1 cut(s) 1910
BstV2I GAAGAC 7 cut(s) 74, 345, 411, 570, 705, 1185, 2040
BstX2I RGATCY 1 cut(s) 887
BstXI CCANNNNNNTGG 3 cut(s) 76, 101, 403
BstYI RGATCY 1 cut(s) 887
Bsu36I CCTNAGG 1 cut(s) 1719
BsuRI GGCC 9 cut(s) 135, 170, 938, 1301, 1437, 1913, 1922, 2055, 2095
BtgI CCRYGG 2 cut(s) 100, 2056
BtrI CACGTC 1 cut(s) 1183
BtsCI GGATG 6 cut(s) 209, 1077, 1119, 1254, 1485, 2076
BtsIMutI CAGTG 6 cut(s) 688, 1771, 1780, 1819, 1921, 1997
Cac8I GCNNGC 5 cut(s) 1530, 1545, 1627, 1986, 2083
CfoI GCGC 1 cut(s) 2087
Cfr10I RCCGGY 1 cut(s) 2081
Cfr13I GGNCC 7 cut(s) 52, 134, 169, 473, 859, 1208, 2093
Cfr9I CCCGGG 1 cut(s) 1881
Csp6I GTAC 5 cut(s) 736, 751, 1273, 1381, 1425
CviQI GTAC 5 cut(s) 736, 751, 1273, 1381, 1425
DdeI CTNAG 7 cut(s) 884, 940, 966, 1533, 1650, 1719, 1942
DpnI GATC 5 cut(s) 41, 603, 889, 1063, 1461
DpnII GATC 5 cut(s) 39, 601, 887, 1061, 1459
DraIII CACNNNGTG 2 cut(s) 157, 1421
EaeI YGGCCR 3 cut(s) 1299, 1911, 2053
Eam1104I CTCTTC 2 cut(s) 663, 1238
EarI CTCTTC 2 cut(s) 663, 1238
Ecl136II GAGCTC 2 cut(s) 536, 1616
Eco130I CCWWGG 3 cut(s) 100, 2039, 2056
Eco24I GRGCYC 4 cut(s) 538, 658, 1618, 1882
Eco31I GGTCTC 1 cut(s) 1443
Eco32I GATATC 1 cut(s) 1045
Eco47I GGWCC 4 cut(s) 52, 473, 859, 1208
Eco53kI GAGCTC 2 cut(s) 536, 1616
Eco57I CTGAAG 5 cut(s) 488, 971, 1180, 1523, 1677
Eco81I CCTNAGG 1 cut(s) 1719
Eco88I CYCGRG 2 cut(s) 137, 1881
EcoICRI GAGCTC 2 cut(s) 536, 1616
EcoRI GAATTC 3 cut(s) 442, 706, 1227
EcoRV GATATC 1 cut(s) 1045
EcoT14I CCWWGG 3 cut(s) 100, 2039, 2056
EcoT38I GRGCYC 4 cut(s) 538, 658, 1618, 1882
ErhI CCWWGG 3 cut(s) 100, 2039, 2056
Esp3I CGTCTC 1 cut(s) 453
FalI AAGNNNNNCTT 4 cut(s) 1521, 1553, 2032, 2064
FaqI GGGAC 4 cut(s) 198, 378, 815, 1639
FbaI TGATCA 1 cut(s) 601
FokI GGATG 6 cut(s) 196, 1084, 1126, 1261, 1492, 2083
FriOI GRGCYC 4 cut(s) 538, 658, 1618, 1882
FspBI CTAG 9 cut(s) 294, 744, 768, 1332, 1469, 1476, 1626, 1671, 1823
GlaI GCGC 1 cut(s) 2086
GsaI CCCAGC 3 cut(s) 931, 1113, 1127
GsuI CTGGAG 2 cut(s) 1448, 1541
HaeIII GGCC 9 cut(s) 135, 170, 938, 1301, 1437, 1913, 1922, 2055, 2095
HhaI GCGC 1 cut(s) 2087
Hin6I GCGC 1 cut(s) 2085
HinP1I GCGC 1 cut(s) 2085
HindIII AAGCTT 3 cut(s) 845, 1289, 1828
HinfI GANTC 7 cut(s) 5, 160, 391, 777, 795, 1751, 1928
HphI GGTGA 6 cut(s) 653, 828, 1049, 1129, 1407, 1598
Hpy166II GTNNAC 6 cut(s) 473, 836, 1089, 1120, 1273, 1427
Hpy188III TCNNGA 6 cut(s) 506, 1217, 1373, 1496, 1589, 1597
Hpy8I GTNNAC 6 cut(s) 473, 836, 1089, 1120, 1273, 1427
Hpy99I CGWCG 1 cut(s) 241
HpyAV CCTTC 6 cut(s) 103, 169, 237, 992, 1354, 1560
HpyCH4III ACNGT 7 cut(s) 470, 626, 1103, 1285, 1735, 1766, 1775
HpyCH4IV ACGT 3 cut(s) 402, 414, 1182
HpyCH4V TGCA 8 cut(s) 756, 784, 920, 972, 1022, 1582, 1898, 1949
HpyF3I CTNAG 7 cut(s) 884, 940, 966, 1533, 1650, 1719, 1942
HpySE526I ACGT 3 cut(s) 402, 414, 1182
HspAI GCGC 1 cut(s) 2085
KroI GCCGGC 1 cut(s) 2081
KroNI GCCGGC 1 cut(s) 2083
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 5 cut(s) 39, 601, 887, 1061, 1459
LguI GCTCTTC 1 cut(s) 663
LweI GCATC 5 cut(s) 994, 1318, 1612, 1927, 2018
MaeI CTAG 9 cut(s) 294, 744, 768, 1332, 1469, 1476, 1626, 1671, 1823
MaeII ACGT 3 cut(s) 402, 414, 1182
MaeIII GTNAC 3 cut(s) 1261, 1413, 1766
MalI GATC 5 cut(s) 41, 603, 889, 1063, 1461
MboI GATC 5 cut(s) 39, 601, 887, 1061, 1459
MflI RGATCY 1 cut(s) 887
MhlI GDGCHC 6 cut(s) 538, 658, 823, 1618, 1839, 1882
MlsI TGGCCA 1 cut(s) 1301
MluCI AATT 7 cut(s) 442, 706, 1052, 1189, 1227, 1639, 2034
MluNI TGGCCA 1 cut(s) 1301
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 4 cut(s) 225, 549, 1892, 2089
Mox20I TGGCCA 1 cut(s) 1301
MreI CGCCGGCG 1 cut(s) 2081
MroNI GCCGGC 1 cut(s) 2081
MroXI GAANNNNTTC 1 cut(s) 879
MscI TGGCCA 1 cut(s) 1301
MseI TTAA 3 cut(s) 1638, 1962, 2025
MslI CAYNNNNRTG 2 cut(s) 789, 2069
Msp20I TGGCCA 1 cut(s) 1301
MspA1I CMGCKG 2 cut(s) 1157, 1946
MspR9I CCNGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
Mva1269I GAATGC 1 cut(s) 1898
MvnI CGCG 1 cut(s) 1910
NaeI GCCGGC 1 cut(s) 2083
NciI CCSGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
NcoI CCATGG 2 cut(s) 100, 2056
NdeII GATC 5 cut(s) 39, 601, 887, 1061, 1459
NgoMIV GCCGGC 1 cut(s) 2081
NheI GCTAGC 1 cut(s) 1625
NmuCI GTSAC 2 cut(s) 1413, 1766
NspI RCATGY 1 cut(s) 1504
NspV TTCGAA 1 cut(s) 364
PciI ACATGT 1 cut(s) 1500
PciSI GCTCTTC 1 cut(s) 663
PcsI WCGNNNNNNNCGW 1 cut(s) 474
PctI GAATGC 1 cut(s) 1898
PdiI GCCGGC 1 cut(s) 2083
PdmI GAANNNNTTC 1 cut(s) 879
PfeI GAWTC 6 cut(s) 5, 160, 777, 795, 1751, 1928
PflFI GACNNNGTC 1 cut(s) 1808
PflMI CCANNNNNTGG 3 cut(s) 593, 830, 934
PfoI TCCNGGA 1 cut(s) 632
PleI GAGTC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 399
PscI ACATGT 1 cut(s) 1500
PshBI ATTAAT 1 cut(s) 1638
Psp124BI GAGCTC 2 cut(s) 538, 1618
PspFI CCCAGC 3 cut(s) 927, 1109, 1123
PspPI GGNCC 7 cut(s) 52, 134, 169, 473, 859, 1208, 2093
PstI CTGCAG 3 cut(s) 922, 1024, 1584
PsuI RGATCY 1 cut(s) 887
PsyI GACNNNGTC 1 cut(s) 1808
PvuII CAGCTG 2 cut(s) 1157, 1946
RsaI GTAC 5 cut(s) 737, 752, 1274, 1382, 1426
RsaNI GTAC 5 cut(s) 736, 751, 1273, 1381, 1425
RseI CAYNNNNRTG 2 cut(s) 789, 2069
SacI GAGCTC 2 cut(s) 538, 1618
SapI GCTCTTC 1 cut(s) 663
SaqAI TTAA 3 cut(s) 1638, 1962, 2025
Sau3AI GATC 5 cut(s) 39, 601, 887, 1061, 1459
Sau96I GGNCC 7 cut(s) 52, 134, 169, 473, 859, 1208, 2093
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 7 cut(s) 172, 634, 1277, 1882, 1883, 1904, 2105
SduI GDGCHC 6 cut(s) 538, 658, 823, 1618, 1839, 1882
SfaNI GCATC 5 cut(s) 994, 1318, 1612, 1927, 2018
SfcI CTRYAG 5 cut(s) 772, 918, 1020, 1580, 1740
SfiI GGCCNNNNNGGCC 1 cut(s) 1919
SfuI TTCGAA 1 cut(s) 364
SgrAI CRCCGGYG 1 cut(s) 2081
SinI GGWCC 4 cut(s) 52, 473, 859, 1208
SmaI CCCGGG 1 cut(s) 1883
SmiMI CAYNNNNRTG 2 cut(s) 789, 2069
SmlI CTYRAG 6 cut(s) 34, 164, 488, 848, 1129, 1494
SmoI CTYRAG 6 cut(s) 34, 164, 488, 848, 1129, 1494
Sse9I AATT 7 cut(s) 442, 706, 1052, 1189, 1227, 1639, 2034
SsiI CCGC 4 cut(s) 645, 664, 1910, 2079
SspMI CTAG 9 cut(s) 294, 744, 768, 1332, 1469, 1476, 1626, 1671, 1823
SstI GAGCTC 2 cut(s) 538, 1618
StyD4I CCNGG 7 cut(s) 170, 632, 1275, 1880, 1881, 1902, 2103
StyI CCWWGG 3 cut(s) 100, 2039, 2056
TaaI ACNGT 7 cut(s) 470, 626, 1103, 1285, 1735, 1766, 1775
TaiI ACGT 3 cut(s) 405, 417, 1185
TaqI TCGA 3 cut(s) 272, 364, 1060
TasI AATT 7 cut(s) 442, 706, 1052, 1189, 1227, 1639, 2034
TatI WGTACW 2 cut(s) 735, 1380
TauI GCSGC 2 cut(s) 1913, 2081
TfiI GAWTC 6 cut(s) 5, 160, 777, 795, 1751, 1928
Tru1I TTAA 3 cut(s) 1638, 1962, 2025
Tru9I TTAA 3 cut(s) 1638, 1962, 2025
TscAI CASTG 6 cut(s) 688, 1771, 1780, 1819, 1921, 2004
TseFI GTSAC 2 cut(s) 1413, 1766
Tsp45I GTSAC 2 cut(s) 1413, 1766
TspDTI ATGAA 7 cut(s) 27, 417, 455, 888, 989, 1112, 1920
TspGWI ACGGA 3 cut(s) 225, 667, 1221
TspMI CCCGGG 1 cut(s) 1881
TspRI CASTG 6 cut(s) 688, 1771, 1780, 1819, 1921, 2004
Tth111I GACNNNGTC 1 cut(s) 1808
Van91I CCANNNNNTGG 3 cut(s) 593, 830, 934
VpaK11BI GGWCC 4 cut(s) 52, 473, 859, 1208
VspI ATTAAT 1 cut(s) 1638
XapI RAATTY 5 cut(s) 442, 706, 1052, 1227, 2034
XceI RCATGY 1 cut(s) 1504
XcmI CCANNNNNNNNNTGG 1 cut(s) 1996
XmaI CCCGGG 1 cut(s) 1881
XmnI GAANNNNTTC 1 cut(s) 879
XspI CTAG 9 cut(s) 294, 744, 768, 1332, 1469, 1476, 1626, 1671, 1823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.