Rw1G002920

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0001189
Physical Location & Seq
Forward (+)
5420935 .. 5424727
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G002920.1

Sequence Viewer

Length: 1992 bp
ATGCCCATATCCAACTCCCCATCCACACCCACCACACCTTCCTCTCCTTCGCCTTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAGAACTCTGCTTCCTCAAGGCTATCTCTCACTATACCAAACTCATCTTCTTCTGCTTCTACTTGGGCTGCTCTGTCTTCCGAGCTTCGAAACCAAGACGAGAGTATGATGATGAGTCCCAACAACATGGCTCCTAACGTGTCTTCTTCATCTTCCATGATGAATTCATCTCTACCCTTTTTCGGAAACGGCGGGCCCGACCATGTGCTTGAGGAGTTTCAGCTTCAAGACCAGCTCTCTTTTCTCAACGATGGAGCTCCTAAATCCCCTGATTTGTTTTACCCCCAGTCAGACTTGTCTTCCAGCCCAACTAATGGTTCTGATCAGACCCTTTTCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTCACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCTGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATCGGGGACTTGGGTTCGGATGGTGTTCCACTTGTTGGTTCACCAAACAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCTAAGTGCGTGAACTTCCTTCTTCAGCAGCAACAAACTGATGCGCAGAGGGCTGCCGCAGCCTTGATGATGGGGGATGATATCCACAAATTTAGTCGATCTCCTCGGATGGAAAGGAACGAGTTTCCAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCCAATTACTTCAGCATTTATGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCATATTTTGGCGAAAGGGAACCCTCATTTTGTGTGTGATGCTCGAGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGTACAGGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGCACACCTACTGGCCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGATGTTTTACAACTCTCAAGACATTTGTGGGAGGAGGAAGCTGGAGGAGCAAGCTGAGCTTCAGCAAGCACTTGAACTTCAAAGCCGAAGGCTAATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCCGGCAGTCCGATTAATTCTCCTACTCAGTCCCCCAGTATGTTCAATCAGAACTTTGTGCATCCTTCATTTCATAACCCAGAAGTTACTAAAGAGAACTGCTCTAGTCCGGTGCCAACCATTTCTTCAGCTCTCTCAGCAGACCAGCAGCCTCAGGTGGCAGCAACCGTTGCAACAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGTGGCAAGGAAAGCCCCCATGATGACGATGTCAGTGGTTTGCTAGGAAGCTTGGAGCACAACCTCCCCGACAGTCCTTTTGCTTCTCCAACAAAAGGAGCCCGGGATTACTTGTCTGCATTCCCGGTCGCGGCCAGTGAGGCCAATGATTCATCTGATGCCTCAGCTGCAACAGCTAACATTAACTTGGCTACTTCCCTACTGCCAGTGCCAGCCACTTCCTCACTGGACATGGCATCTTTCAAGTCCTTTAACTGCCAAATTCCAAGGTTGTCTTCCGGCCATGGAGCCATAGGGATGTATGCCGCCGGCGCAGGGGGGCCGAAATGCCCGGTTGGAACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

663

Amino Acids

71.09

Weight (kDa)

6.12

Isoelectric Point (pI)

61.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 326 - 371 5.6e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 816
AccB1I GGYRCC 2 cut(s) 1543, 1622
AccB7I CCANNNNNTGG 3 cut(s) 401, 638, 742
AccII CGCG 1 cut(s) 1775
AciI CCGC 6 cut(s) 279, 453, 472, 828, 1775, 1950
AclWI GGATC 1 cut(s) 690
AcoI YGGCCR 2 cut(s) 1776, 1924
AcsI RAATTY 5 cut(s) 250, 514, 860, 1035, 1905
AcuI CTGAAG 4 cut(s) 779, 988, 1331, 1542
AdeI CACNNNGTG 1 cut(s) 1229
AfaI GTAC 4 cut(s) 545, 560, 1082, 1190
AfiI CCNNNNNNNGG 9 cut(s) 269, 401, 447, 518, 638, 742, 1739, 1774, 1959
AflIII ACRYGT 2 cut(s) 225, 990
AgsI TTSAA 6 cut(s) 314, 1025, 1361, 1367, 1477, 1888
AjiI CACGTC 1 cut(s) 991
AloI GAACNNNNNNTCC 2 cut(s) 83, 115
Alw21I GWGCWC 3 cut(s) 346, 1426, 1704
Alw26I GTCTC 2 cut(s) 1082, 1251
AlwI GGATC 1 cut(s) 690
Ama87I CYCGRG 2 cut(s) 1140, 1746
AoxI GGCC 7 cut(s) 281, 744, 1243, 1776, 1785, 1924, 1964
ApaI GGGCCC 1 cut(s) 285
ApoI RAATTY 5 cut(s) 250, 514, 860, 1035, 1905
ArsI GACNNNNNNTTYG 2 cut(s) 1706, 1738
AseI ATTAAT 1 cut(s) 1446
Asp700I GAANNNNTTC 1 cut(s) 687
AspLEI GCGC 2 cut(s) 817, 1958
AspS9I GGNCC 5 cut(s) 281, 282, 667, 1016, 1964
AsuC2I CCSGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
AsuHPI GGTGA 5 cut(s) 461, 636, 937, 1215, 1406
AsuII TTCGAA 1 cut(s) 175
AvaI CYCGRG 2 cut(s) 1140, 1746
AvaII GGWCC 2 cut(s) 667, 1016
AxyI CCTNAGG 1 cut(s) 1584
BaeGI GKGCMC 1 cut(s) 285
BanI GGYRCC 2 cut(s) 1543, 1622
BanII GRGCYC 5 cut(s) 285, 346, 466, 1426, 1747
BbsI GAAGAC 6 cut(s) 156, 222, 378, 513, 993, 1911
Bbv12I GWGCWC 3 cut(s) 346, 1426, 1704
BbvCI CCTCAGC 2 cut(s) 748, 1807
BccI CCATC 8 cut(s) 28, 332, 617, 658, 835, 874, 916, 1244
BceAI ACGGC 1 cut(s) 292
BclI TGATCA 1 cut(s) 409
BcnI CCSGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
BcoDI GTCTC 2 cut(s) 1082, 1251
BfaI CTAG 6 cut(s) 552, 576, 1277, 1284, 1536, 1688
BfmI CTRYAG 3 cut(s) 580, 726, 1388
BglI GCCNNNNNGGC 1 cut(s) 1784
BlpI GCTNAGC 1 cut(s) 1341
Bme1390I CCNGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
Bme18I GGWCC 2 cut(s) 667, 1016
BmeT110I CYCGRG 2 cut(s) 1140, 1746
BmgBI CACGTC 1 cut(s) 991
BmgT120I GGNCC 5 cut(s) 281, 282, 667, 1016, 1964
BmiI GGNNCC 9 cut(s) 219, 283, 439, 1118, 1545, 1624, 1744, 1933, 1965
BmrFI CCNGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
BmrI ACTGGG 3 cut(s) 367, 457, 1461
BmsI GCATC 6 cut(s) 802, 1126, 1420, 1501, 1792, 1889
BmuI ACTGGG 3 cut(s) 367, 457, 1461
BpiI GAAGAC 6 cut(s) 156, 222, 378, 513, 993, 1911
BplI GAGNNNNNCTC 2 cut(s) 1517, 1549
BpmI CTGGAG 2 cut(s) 1256, 1349
Bpu10I CCTNAGC 2 cut(s) 748, 1807
Bpu1102I GCTNAGC 1 cut(s) 1341
Bpu14I TTCGAA 1 cut(s) 175
BpuEI CTTGAG 5 cut(s) 88, 317, 677, 922, 1287
BpuMI CCSGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
BsaI GGTCTC 1 cut(s) 1251
BsaJI CCNNGG 4 cut(s) 875, 1746, 1910, 1927
BsaWI WCCGGW 1 cut(s) 1540
BsaXI ACNNNNNCTCC 2 cut(s) 422, 452
Bsc4I CCNNNNNNNGG 9 cut(s) 269, 401, 447, 518, 638, 742, 1739, 1774, 1959
Bse118I RCCGGY 2 cut(s) 1433, 1952
Bse1I ACTGG 9 cut(s) 373, 452, 670, 726, 1246, 1467, 1779, 1850, 1875
Bse21I CCTNAGG 1 cut(s) 1584
BseDI CCNNGG 4 cut(s) 875, 1746, 1910, 1927
BseGI GGATG 9 cut(s) 20, 628, 853, 885, 927, 1062, 1293, 1492, 1947
BseLI CCNNNNNNNGG 9 cut(s) 269, 401, 447, 518, 638, 742, 1739, 1774, 1959
BseMII CTCAG 7 cut(s) 706, 762, 1332, 1472, 1581, 1598, 1821
BseNI ACTGG 9 cut(s) 373, 452, 670, 726, 1246, 1467, 1779, 1850, 1875
BseRI GAGGAG 7 cut(s) 314, 415, 760, 864, 1227, 1333, 1346
BseSI GKGCMC 1 cut(s) 285
BseYI CCCAGC 3 cut(s) 735, 917, 931
Bsh1236I CGCG 1 cut(s) 1775
Bsh1285I CGRYCG 1 cut(s) 1773
BshFI GGCC 7 cut(s) 283, 746, 1245, 1778, 1787, 1926, 1966
BshNI GGYRCC 2 cut(s) 1543, 1622
BsiEI CGRYCG 1 cut(s) 1773
BsiHKAI GWGCWC 3 cut(s) 346, 1426, 1704
BsiHKCI CYCGRG 2 cut(s) 1140, 1746
BslFI GGGAC 3 cut(s) 189, 623, 1447
BslI CCNNNNNNNGG 9 cut(s) 269, 401, 447, 518, 638, 742, 1739, 1774, 1959
BsmAI GTCTC 2 cut(s) 1082, 1251
BsmFI GGGAC 3 cut(s) 189, 623, 1447
BsmI GAATGC 1 cut(s) 1763
BsnI GGCC 7 cut(s) 283, 746, 1245, 1778, 1787, 1926, 1966
Bso31I GGTCTC 1 cut(s) 1251
BsoBI CYCGRG 2 cut(s) 1140, 1746
Bsp119I TTCGAA 1 cut(s) 175
Bsp120I GGGCCC 1 cut(s) 281
Bsp1286I GDGCHC 6 cut(s) 285, 346, 466, 1426, 1704, 1747
Bsp143I GATC 4 cut(s) 409, 695, 869, 1267
Bsp1720I GCTNAGC 1 cut(s) 1341
Bsp19I CCATGG 1 cut(s) 1927
BspACI CCGC 6 cut(s) 279, 453, 472, 828, 1775, 1950
BspANI GGCC 7 cut(s) 283, 746, 1245, 1778, 1787, 1926, 1966
BspCNI CTCAG 7 cut(s) 705, 761, 1333, 1471, 1580, 1597, 1820
BspFNI CGCG 1 cut(s) 1775
BspLI GGNNCC 9 cut(s) 219, 283, 439, 1118, 1545, 1624, 1744, 1933, 1965
BspMAI CTGCAG 2 cut(s) 730, 1392
BspPI GGATC 1 cut(s) 690
BspQI GCTCTTC 1 cut(s) 471
BspT104I TTCGAA 1 cut(s) 175
BspT107I GGYRCC 2 cut(s) 1543, 1622
BspTNI GGTCTC 1 cut(s) 1251
BsrFI RCCGGY 2 cut(s) 1433, 1952
BsrI ACTGG 9 cut(s) 373, 452, 670, 726, 1246, 1467, 1779, 1850, 1875
BssAI RCCGGY 2 cut(s) 1433, 1952
BssECI CCNNGG 4 cut(s) 875, 1746, 1910, 1927
BssMI GATC 4 cut(s) 409, 695, 869, 1267
BssT1I CCWWGG 2 cut(s) 1910, 1927
Bst4CI ACNGT 7 cut(s) 434, 911, 1093, 1600, 1631, 1640, 1718
Bst6I CTCTTC 2 cut(s) 471, 1046
BstAPI GCANNNNNTGC 1 cut(s) 1601
BstBI TTCGAA 1 cut(s) 175
BstC8I GCNNGC 6 cut(s) 281, 1338, 1353, 1435, 1857, 1954
BstDEI CTNAG 8 cut(s) 692, 748, 774, 1341, 1458, 1567, 1584, 1807
BstDSI CCRYGG 1 cut(s) 1927
BstF5I GGATG 9 cut(s) 20, 628, 853, 885, 927, 1062, 1293, 1492, 1947
BstFNI CGCG 1 cut(s) 1775
BstHHI GCGC 2 cut(s) 817, 1958
BstKTI GATC 4 cut(s) 412, 698, 872, 1270
BstMAI GTCTC 2 cut(s) 1082, 1251
BstMBI GATC 4 cut(s) 409, 695, 869, 1267
BstMCI CGRYCG 1 cut(s) 1773
BstSCI CCNGG 6 cut(s) 440, 1083, 1745, 1746, 1767, 1974
BstSFI CTRYAG 3 cut(s) 580, 726, 1388
BstSLI GKGCMC 1 cut(s) 285
BstUI CGCG 1 cut(s) 1775
BstV2I GAAGAC 6 cut(s) 156, 222, 378, 513, 993, 1911
BstX2I RGATCY 1 cut(s) 695
BstXI CCANNNNNNTGG 1 cut(s) 214
BstYI RGATCY 1 cut(s) 695
Bsu36I CCTNAGG 1 cut(s) 1584
BsuRI GGCC 7 cut(s) 283, 746, 1245, 1778, 1787, 1926, 1966
BtgI CCRYGG 1 cut(s) 1927
BtrI CACGTC 1 cut(s) 991
BtsCI GGATG 9 cut(s) 20, 628, 853, 885, 927, 1062, 1293, 1492, 1947
BtsIMutI CAGTG 7 cut(s) 496, 1636, 1645, 1684, 1786, 1857, 1868
Cac8I GCNNGC 6 cut(s) 281, 1338, 1353, 1435, 1857, 1954
CfoI GCGC 2 cut(s) 817, 1958
Cfr10I RCCGGY 2 cut(s) 1433, 1952
Cfr13I GGNCC 5 cut(s) 281, 282, 667, 1016, 1964
Cfr9I CCCGGG 1 cut(s) 1746
Csp6I GTAC 4 cut(s) 544, 559, 1081, 1189
CviAII CATG 9 cut(s) 214, 244, 290, 593, 680, 742, 1664, 1876, 1928
CviQI GTAC 4 cut(s) 544, 559, 1081, 1189
DdeI CTNAG 8 cut(s) 692, 748, 774, 1341, 1458, 1567, 1584, 1807
DpnI GATC 4 cut(s) 411, 697, 871, 1269
DpnII GATC 4 cut(s) 409, 695, 869, 1267
DraIII CACNNNGTG 1 cut(s) 1229
EaeI YGGCCR 2 cut(s) 1776, 1924
Eam1104I CTCTTC 2 cut(s) 471, 1046
EarI CTCTTC 2 cut(s) 471, 1046
Ecl136II GAGCTC 2 cut(s) 344, 1424
Eco130I CCWWGG 2 cut(s) 1910, 1927
Eco24I GRGCYC 5 cut(s) 285, 346, 466, 1426, 1747
Eco31I GGTCTC 1 cut(s) 1251
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 2 cut(s) 667, 1016
Eco53kI GAGCTC 2 cut(s) 344, 1424
Eco57I CTGAAG 4 cut(s) 779, 988, 1331, 1542
Eco81I CCTNAGG 1 cut(s) 1584
Eco88I CYCGRG 2 cut(s) 1140, 1746
EcoICRI GAGCTC 2 cut(s) 344, 1424
EcoRI GAATTC 3 cut(s) 250, 514, 1035
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 2 cut(s) 1910, 1927
EcoT38I GRGCYC 5 cut(s) 285, 346, 466, 1426, 1747
ErhI CCWWGG 2 cut(s) 1910, 1927
FaeI CATG 9 cut(s) 217, 247, 293, 596, 683, 745, 1667, 1879, 1931
FalI AAGNNNNNCTT 4 cut(s) 1329, 1361, 1903, 1935
FaqI GGGAC 3 cut(s) 189, 623, 1447
FatI CATG 9 cut(s) 213, 243, 289, 592, 679, 741, 1663, 1875, 1927
FauI CCCGC 1 cut(s) 272
FbaI TGATCA 1 cut(s) 409
FokI GGATG 9 cut(s) 7, 635, 860, 892, 934, 1069, 1300, 1479, 1954
FriOI GRGCYC 5 cut(s) 285, 346, 466, 1426, 1747
FspBI CTAG 6 cut(s) 552, 576, 1277, 1284, 1536, 1688
FspI TGCGCA 1 cut(s) 816
GlaI GCGC 2 cut(s) 816, 1957
GsaI CCCAGC 3 cut(s) 739, 921, 935
GsuI CTGGAG 2 cut(s) 1256, 1349
HaeIII GGCC 7 cut(s) 283, 746, 1245, 1778, 1787, 1926, 1966
HhaI GCGC 2 cut(s) 817, 1958
Hin1II CATG 9 cut(s) 217, 247, 293, 596, 683, 745, 1667, 1879, 1931
Hin6I GCGC 2 cut(s) 815, 1956
HinP1I GCGC 2 cut(s) 815, 1956
HindIII AAGCTT 2 cut(s) 653, 1693
HinfI GANTC 5 cut(s) 202, 585, 603, 1616, 1793
HphI GGTGA 5 cut(s) 461, 636, 937, 1215, 1406
Hpy166II GTNNAC 4 cut(s) 644, 784, 928, 1081
Hpy188III TCNNGA 6 cut(s) 314, 1025, 1181, 1304, 1397, 1405
Hpy8I GTNNAC 4 cut(s) 644, 784, 928, 1081
HpyAV CCTTC 6 cut(s) 48, 57, 800, 1162, 1368, 1506
HpyCH4III ACNGT 7 cut(s) 434, 911, 1093, 1600, 1631, 1640, 1718
HpyCH4IV ACGT 2 cut(s) 225, 990
HpyCH4V TGCA 8 cut(s) 564, 592, 728, 1390, 1492, 1604, 1763, 1814
HpyF3I CTNAG 8 cut(s) 692, 748, 774, 1341, 1458, 1567, 1584, 1807
HpySE526I ACGT 2 cut(s) 225, 990
Hsp92II CATG 9 cut(s) 217, 247, 293, 596, 683, 745, 1667, 1879, 1931
HspAI GCGC 2 cut(s) 815, 1956
KroI GCCGGC 2 cut(s) 1433, 1952
KroNI GCCGGC 2 cut(s) 1435, 1954
Ksp22I TGATCA 1 cut(s) 409
Kzo9I GATC 4 cut(s) 409, 695, 869, 1267
LguI GCTCTTC 1 cut(s) 471
LweI GCATC 6 cut(s) 802, 1126, 1420, 1501, 1792, 1889
MaeI CTAG 6 cut(s) 552, 576, 1277, 1284, 1536, 1688
MaeII ACGT 2 cut(s) 225, 990
MaeIII GTNAC 4 cut(s) 1069, 1221, 1516, 1631
MalI GATC 4 cut(s) 411, 697, 871, 1269
MboI GATC 4 cut(s) 409, 695, 869, 1267
MflI RGATCY 1 cut(s) 695
MhlI GDGCHC 6 cut(s) 285, 346, 466, 1426, 1704, 1747
MluCI AATT 7 cut(s) 250, 514, 860, 997, 1035, 1447, 1905
MlyI GAGTC 1 cut(s) 211
MmeI TCCRAC 3 cut(s) 36, 1757, 1960
MreI CGCCGGCG 1 cut(s) 1952
MroNI GCCGGC 2 cut(s) 1433, 1952
MroXI GAANNNNTTC 1 cut(s) 687
MseI TTAA 3 cut(s) 1446, 1827, 1896
MslI CAYNNNNRTG 2 cut(s) 597, 1940
MspA1I CMGCKG 2 cut(s) 965, 1811
MspR9I CCNGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
Mva1269I GAATGC 1 cut(s) 1763
MvnI CGCG 1 cut(s) 1775
NaeI GCCGGC 2 cut(s) 1435, 1954
NciI CCSGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
NcoI CCATGG 1 cut(s) 1927
NdeII GATC 4 cut(s) 409, 695, 869, 1267
NgoMIV GCCGGC 2 cut(s) 1433, 1952
NlaIII CATG 9 cut(s) 217, 247, 293, 596, 683, 745, 1667, 1879, 1931
NlaIV GGNNCC 9 cut(s) 219, 283, 439, 1118, 1545, 1624, 1744, 1933, 1965
NmuCI GTSAC 2 cut(s) 1221, 1631
NsbI TGCGCA 1 cut(s) 816
NspV TTCGAA 1 cut(s) 175
PaeR7I CTCGAG 1 cut(s) 1140
PciSI GCTCTTC 1 cut(s) 471
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PctI GAATGC 1 cut(s) 1763
PdiI GCCGGC 2 cut(s) 1435, 1954
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 4 cut(s) 585, 603, 1616, 1793
PflFI GACNNNGTC 1 cut(s) 1673
PflMI CCANNNNNTGG 3 cut(s) 401, 638, 742
PfoI TCCNGGA 1 cut(s) 440
PleI GAGTC 1 cut(s) 210
PpsI GAGTC 1 cut(s) 210
PshBI ATTAAT 1 cut(s) 1446
Psp124BI GAGCTC 2 cut(s) 346, 1426
PspFI CCCAGC 3 cut(s) 735, 917, 931
PspN4I GGNNCC 9 cut(s) 219, 283, 439, 1118, 1545, 1624, 1744, 1933, 1965
PspOMI GGGCCC 1 cut(s) 281
PspPI GGNCC 5 cut(s) 281, 282, 667, 1016, 1964
PspXI VCTCGAGB 1 cut(s) 1140
PstI CTGCAG 2 cut(s) 730, 1392
PsuI RGATCY 1 cut(s) 695
PsyI GACNNNGTC 1 cut(s) 1673
PvuII CAGCTG 2 cut(s) 965, 1811
RsaI GTAC 4 cut(s) 545, 560, 1082, 1190
RsaNI GTAC 4 cut(s) 544, 559, 1081, 1189
RseI CAYNNNNRTG 2 cut(s) 597, 1940
SacI GAGCTC 2 cut(s) 346, 1426
SapI GCTCTTC 1 cut(s) 471
SaqAI TTAA 3 cut(s) 1446, 1827, 1896
Sau3AI GATC 4 cut(s) 409, 695, 869, 1267
Sau96I GGNCC 5 cut(s) 281, 282, 667, 1016, 1964
SchI GAGTC 1 cut(s) 211
ScrFI CCNGG 6 cut(s) 442, 1085, 1747, 1748, 1769, 1976
SduI GDGCHC 6 cut(s) 285, 346, 466, 1426, 1704, 1747
SfaNI GCATC 6 cut(s) 802, 1126, 1420, 1501, 1792, 1889
SfcI CTRYAG 3 cut(s) 580, 726, 1388
SfiI GGCCNNNNNGGCC 1 cut(s) 1784
Sfr274I CTCGAG 1 cut(s) 1140
SfuI TTCGAA 1 cut(s) 175
SgrAI CRCCGGYG 1 cut(s) 1952
SinI GGWCC 2 cut(s) 667, 1016
SlaI CTCGAG 1 cut(s) 1140
SmaI CCCGGG 1 cut(s) 1748
SmiMI CAYNNNNRTG 2 cut(s) 597, 1940
SmlI CTYRAG 6 cut(s) 103, 296, 656, 937, 1140, 1302
SmoI CTYRAG 6 cut(s) 103, 296, 656, 937, 1140, 1302
Sse9I AATT 7 cut(s) 250, 514, 860, 997, 1035, 1447, 1905
SsiI CCGC 6 cut(s) 279, 453, 472, 828, 1775, 1950
SspMI CTAG 6 cut(s) 552, 576, 1277, 1284, 1536, 1688
SstI GAGCTC 2 cut(s) 346, 1426
StyD4I CCNGG 6 cut(s) 440, 1083, 1745, 1746, 1767, 1974
StyI CCWWGG 2 cut(s) 1910, 1927
TaaI ACNGT 7 cut(s) 434, 911, 1093, 1600, 1631, 1640, 1718
TaiI ACGT 2 cut(s) 228, 993
TaqI TCGA 4 cut(s) 83, 175, 868, 1141
TasI AATT 7 cut(s) 250, 514, 860, 997, 1035, 1447, 1905
TatI WGTACW 2 cut(s) 543, 1188
TauI GCSGC 3 cut(s) 830, 1778, 1952
TfiI GAWTC 4 cut(s) 585, 603, 1616, 1793
Tru1I TTAA 3 cut(s) 1446, 1827, 1896
Tru9I TTAA 3 cut(s) 1446, 1827, 1896
TscAI CASTG 7 cut(s) 496, 1636, 1645, 1684, 1786, 1857, 1875
TseFI GTSAC 2 cut(s) 1221, 1631
Tsp45I GTSAC 2 cut(s) 1221, 1631
TspDTI ATGAA 8 cut(s) 225, 243, 263, 696, 920, 1488, 1493, 1785
TspGWI ACGGA 1 cut(s) 475
TspMI CCCGGG 1 cut(s) 1746
TspRI CASTG 7 cut(s) 496, 1636, 1645, 1684, 1786, 1857, 1875
Tth111I GACNNNGTC 1 cut(s) 1673
Van91I CCANNNNNTGG 3 cut(s) 401, 638, 742
VpaK11BI GGWCC 2 cut(s) 667, 1016
VspI ATTAAT 1 cut(s) 1446
XapI RAATTY 5 cut(s) 250, 514, 860, 1035, 1905
XcmI CCANNNNNNNNNTGG 1 cut(s) 1867
XhoI CTCGAG 1 cut(s) 1140
XmaI CCCGGG 1 cut(s) 1746
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 6 cut(s) 552, 576, 1277, 1284, 1536, 1688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.