Rh1CG036900

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0001189
Physical Location & Seq
Forward (+)
7180426 .. 7185383
4958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG036900.1

Sequence Viewer

Length: 2127 bp
ATGGATTCCTATGAAGCTACAAGGATTGTGTTCTCAAGGATCACAAACTTGGACCCAGAAAATGCTTCCAAAATCATGGGTCTTCTTCTAATCCAAGACCATGGAGAGAAGGAGATGATACGATTAGCTTTCGGCCCCGAGGCGTTTCTCCACTCTGTGATTCTCAAGGCTCGGAAGGACTTGGGACTAATGCCCATATCCAACTCTCCATCCACACCCACCACACCTTCCTCTCCTTCGCCCTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAAAACTCTGCTTCCTCAAGGCTATCTCTCACTATACCAAACCCATCTTCTTCTGCTTCTACTTGGGCTGCTTTGTCTTCCGAGCTTCGAAACCAAGACGAGAGTATGATGATGAGTCCCAACAACATGGCTCCTAACGTGTCTTCTTCATCTTCCATGATGAATTCATCTCTACCCTTTTTCGGAAACGGTGGACCCGACCATGTGCTTGAGGAGTTTCAGCTTCAAGACCAGCTCTCTTTTCTCAACGATGGAGCTCCTAAATCCCCTGATTTGTTTTACCCCCAGTCAGACTTGTCTTCCAGCCCAACTAATGGTTCTGATCAGACCCTTTTCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTCACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCCGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATCGGGGACTTGGGTTCGGATGGTGTTCCACTTGTTGGTTCACCAAACAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCTAAGTGCGTGAACTTCCTTCTTCAGCAGCAACAAACTGATGCGCAGAGGGCTGCCGCAGCCTTGATGATGGGGGATGATATCCACAAATTTAGTCGATCTCCTCGGATGGAAAGGAGCGAGTTTCCAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCAAATTACTTCAGCATTTATGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCATATTTTGGCGAAAGGAAACCCTCATTTTGTGTGTGATGCTCGAGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGTACAGGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGTACACCTACTGGTCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGTTGTTTTACAACTCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCAGAGCTTCAGCAAGCACTTGAACTTCAAAGCCGAAGGCTAATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCCAGCAGTCCGATTAATTCTCCCACTCAGTCCCCCAGTATGTTCAATCAGAACTTTGTGCATCCTTCATTTCATAACCCAGAAGTTACTAAAGAGAACTGCTCTAGTCCGGTACCAACCATTTCTTCAGCTCTCTCAGCAGACCAGCAGCCTCAGGTGGCAGCAACCGTGGCTACAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGTGGCAAGGATAGCCCCCATGATGACGATGTCAGTGGTTTGCTAGGAAGCTTGGAGCACAACCTCCCCGACAGCCCTTTTGCTTCGCCAACAAAAGGAGCCCGGGATTACTTGTCTGCATTCCCGGTCGCGGCCAGTGAGGCCAATGATTCATCTGATGCCTCAGCTGCAACAGCTAACATTAACTTGGCTACTACCCTACTGCCAGTGCCAGCCACTTCCTCACTGGACATGGCATCTTTCAAGTCCTTTAACTGCCAAATTCCAAGGTTACCCCCCAATCCACTTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

708

Amino Acids

76.86

Weight (kDa)

6.0

Isoelectric Point (pI)

59.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 64 4.2e-33 AtC3H46 PABC domain
RRM_1 PF00076 389 - 434 6e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1005
Acc65I GGTACC 1 cut(s) 1732
AccB1I GGYRCC 2 cut(s) 1732, 1811
AccB7I CCANNNNNTGG 3 cut(s) 590, 827, 931
AccII CGCG 1 cut(s) 1964
AciI CCGC 4 cut(s) 642, 661, 1017, 1964
AclWI GGATC 2 cut(s) 47, 879
AcoI YGGCCR 1 cut(s) 1965
AcsI RAATTY 5 cut(s) 439, 703, 1049, 1224, 2094
AcuI CTGAAG 4 cut(s) 968, 1177, 1520, 1731
AdeI CACNNNGTG 2 cut(s) 157, 1418
AfaI GTAC 6 cut(s) 734, 749, 1271, 1379, 1423, 1734
AfiI CCNNNNNNNGG 9 cut(s) 458, 590, 636, 707, 714, 827, 931, 1928, 1963
AflIII ACRYGT 3 cut(s) 414, 1179, 1497
AgsI TTSAA 6 cut(s) 503, 1214, 1550, 1556, 1666, 2077
AjiI CACGTC 1 cut(s) 1180
Alw21I GWGCWC 3 cut(s) 535, 1615, 1893
Alw26I GTCTC 2 cut(s) 1271, 1440
AlwI GGATC 2 cut(s) 47, 879
Ama87I CYCGRG 3 cut(s) 137, 1329, 1935
AoxI GGCC 4 cut(s) 133, 933, 1965, 1974
ApoI RAATTY 5 cut(s) 439, 703, 1049, 1224, 2094
ArsI GACNNNNNNTTYG 2 cut(s) 1895, 1927
AseI ATTAAT 1 cut(s) 1635
Asp700I GAANNNNTTC 1 cut(s) 876
Asp718I GGTACC 1 cut(s) 1732
AspLEI GCGC 1 cut(s) 1006
AspS9I GGNCC 5 cut(s) 52, 134, 470, 856, 1205
AsuC2I CCSGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
AsuHPI GGTGA 5 cut(s) 650, 825, 1126, 1404, 1595
AsuII TTCGAA 1 cut(s) 364
AvaI CYCGRG 3 cut(s) 137, 1329, 1935
AvaII GGWCC 4 cut(s) 52, 470, 856, 1205
AxyI CCTNAGG 1 cut(s) 1773
BanI GGYRCC 2 cut(s) 1732, 1811
BanII GRGCYC 4 cut(s) 535, 655, 1615, 1936
BbsI GAAGAC 6 cut(s) 74, 345, 411, 567, 702, 1182
Bbv12I GWGCWC 3 cut(s) 535, 1615, 1893
BbvCI CCTCAGC 2 cut(s) 937, 1996
BccI CCATC 9 cut(s) 217, 328, 521, 806, 847, 1024, 1063, 1105, 1433
BclI TGATCA 1 cut(s) 598
BcnI CCSGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
BcoDI GTCTC 2 cut(s) 1271, 1440
BfaI CTAG 6 cut(s) 741, 765, 1466, 1473, 1725, 1877
BfmI CTRYAG 4 cut(s) 769, 915, 1577, 1794
BglI GCCNNNNNGGC 1 cut(s) 1973
Bme1390I CCNGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
Bme18I GGWCC 4 cut(s) 52, 470, 856, 1205
BmeT110I CYCGRG 3 cut(s) 137, 1329, 1935
BmgBI CACGTC 1 cut(s) 1180
BmgT120I GGNCC 5 cut(s) 52, 134, 470, 856, 1205
BmiI GGNNCC 8 cut(s) 54, 136, 408, 472, 628, 1734, 1813, 1933
BmrFI CCNGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
BmrI ACTGGG 3 cut(s) 556, 646, 1650
BmsI GCATC 6 cut(s) 991, 1315, 1609, 1690, 1981, 2078
BmuI ACTGGG 3 cut(s) 556, 646, 1650
BpiI GAAGAC 6 cut(s) 74, 345, 411, 567, 702, 1182
BplI GAGNNNNNCTC 2 cut(s) 1706, 1738
BpmI CTGGAG 2 cut(s) 1445, 1538
Bpu10I CCTNAGC 2 cut(s) 937, 1996
Bpu14I TTCGAA 1 cut(s) 364
BpuEI CTTGAG 7 cut(s) 19, 149, 277, 506, 866, 1111, 1476
BpuMI CCSGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
BsaI GGTCTC 1 cut(s) 1440
BsaJI CCNNGG 6 cut(s) 100, 138, 1064, 1788, 1935, 2099
BsaWI WCCGGW 1 cut(s) 1729
BsaXI ACNNNNNCTCC 2 cut(s) 611, 641
Bsc4I CCNNNNNNNGG 9 cut(s) 458, 590, 636, 707, 714, 827, 931, 1928, 1963
Bse1I ACTGG 9 cut(s) 562, 641, 859, 915, 1435, 1656, 1968, 2039, 2064
Bse21I CCTNAGG 1 cut(s) 1773
BseDI CCNNGG 6 cut(s) 100, 138, 1064, 1788, 1935, 2099
BseGI GGATG 7 cut(s) 209, 817, 1042, 1074, 1116, 1251, 1681
BseLI CCNNNNNNNGG 9 cut(s) 458, 590, 636, 707, 714, 827, 931, 1928, 1963
BseMII CTCAG 6 cut(s) 895, 951, 1661, 1770, 1787, 2010
BseNI ACTGG 9 cut(s) 562, 641, 859, 915, 1435, 1656, 1968, 2039, 2064
BseRI GAGGAG 7 cut(s) 503, 604, 949, 1053, 1416, 1522, 1535
BseYI CCCAGC 3 cut(s) 924, 1106, 1120
Bsh1236I CGCG 1 cut(s) 1964
Bsh1285I CGRYCG 1 cut(s) 1962
BshFI GGCC 4 cut(s) 135, 935, 1967, 1976
BshNI GGYRCC 2 cut(s) 1732, 1811
BsiEI CGRYCG 1 cut(s) 1962
BsiHKAI GWGCWC 3 cut(s) 535, 1615, 1893
BsiHKCI CYCGRG 3 cut(s) 137, 1329, 1935
BsiSI CCGG 7 cut(s) 630, 664, 708, 1274, 1730, 1936, 1958
BslFI GGGAC 4 cut(s) 198, 378, 812, 1636
BslI CCNNNNNNNGG 9 cut(s) 458, 590, 636, 707, 714, 827, 931, 1928, 1963
BsmAI GTCTC 2 cut(s) 1271, 1440
BsmFI GGGAC 4 cut(s) 198, 378, 812, 1636
BsmI GAATGC 1 cut(s) 1952
BsnI GGCC 4 cut(s) 135, 935, 1967, 1976
Bso31I GGTCTC 1 cut(s) 1440
BsoBI CYCGRG 3 cut(s) 137, 1329, 1935
Bsp119I TTCGAA 1 cut(s) 364
Bsp1286I GDGCHC 5 cut(s) 535, 655, 1615, 1893, 1936
Bsp143I GATC 5 cut(s) 39, 598, 884, 1058, 1456
Bsp19I CCATGG 1 cut(s) 100
BspACI CCGC 4 cut(s) 642, 661, 1017, 1964
BspANI GGCC 4 cut(s) 135, 935, 1967, 1976
BspCNI CTCAG 6 cut(s) 894, 950, 1660, 1769, 1786, 2009
BspFNI CGCG 1 cut(s) 1964
BspLI GGNNCC 8 cut(s) 54, 136, 408, 472, 628, 1734, 1813, 1933
BspMAI CTGCAG 2 cut(s) 919, 1581
BspPI GGATC 2 cut(s) 47, 879
BspQI GCTCTTC 1 cut(s) 660
BspT104I TTCGAA 1 cut(s) 364
BspT107I GGYRCC 2 cut(s) 1732, 1811
BspTNI GGTCTC 1 cut(s) 1440
BsrI ACTGG 9 cut(s) 562, 641, 859, 915, 1435, 1656, 1968, 2039, 2064
BssECI CCNNGG 6 cut(s) 100, 138, 1064, 1788, 1935, 2099
BssMI GATC 5 cut(s) 39, 598, 884, 1058, 1456
BssT1I CCWWGG 2 cut(s) 100, 2099
Bst4CI ACNGT 7 cut(s) 467, 623, 1100, 1282, 1789, 1820, 1829
Bst6I CTCTTC 2 cut(s) 660, 1235
BstBI TTCGAA 1 cut(s) 364
BstC8I GCNNGC 4 cut(s) 1527, 1542, 1624, 2046
BstDEI CTNAG 7 cut(s) 881, 937, 963, 1647, 1756, 1773, 1996
BstDSI CCRYGG 2 cut(s) 100, 1788
BstEII GGTNACC 1 cut(s) 2103
BstF5I GGATG 7 cut(s) 209, 817, 1042, 1074, 1116, 1251, 1681
BstFNI CGCG 1 cut(s) 1964
BstHHI GCGC 1 cut(s) 1006
BstKTI GATC 5 cut(s) 42, 601, 887, 1061, 1459
BstMAI GTCTC 2 cut(s) 1271, 1440
BstMBI GATC 5 cut(s) 39, 598, 884, 1058, 1456
BstMCI CGRYCG 1 cut(s) 1962
BstNSI RCATGY 1 cut(s) 1501
BstPI GGTNACC 1 cut(s) 2103
BstSCI CCNGG 6 cut(s) 629, 707, 1272, 1934, 1935, 1956
BstSFI CTRYAG 4 cut(s) 769, 915, 1577, 1794
BstUI CGCG 1 cut(s) 1964
BstV2I GAAGAC 6 cut(s) 74, 345, 411, 567, 702, 1182
BstX2I RGATCY 1 cut(s) 884
BstXI CCANNNNNNTGG 3 cut(s) 76, 101, 403
BstYI RGATCY 1 cut(s) 884
Bsu36I CCTNAGG 1 cut(s) 1773
BsuRI GGCC 4 cut(s) 135, 935, 1967, 1976
BtgI CCRYGG 2 cut(s) 100, 1788
BtrI CACGTC 1 cut(s) 1180
BtsCI GGATG 7 cut(s) 209, 817, 1042, 1074, 1116, 1251, 1681
BtsIMutI CAGTG 7 cut(s) 685, 1825, 1834, 1873, 1975, 2046, 2057
Cac8I GCNNGC 4 cut(s) 1527, 1542, 1624, 2046
CfoI GCGC 1 cut(s) 1006
Cfr13I GGNCC 5 cut(s) 52, 134, 470, 856, 1205
Cfr9I CCCGGG 1 cut(s) 1935
Csp6I GTAC 6 cut(s) 733, 748, 1270, 1378, 1422, 1733
CviQI GTAC 6 cut(s) 733, 748, 1270, 1378, 1422, 1733
DdeI CTNAG 7 cut(s) 881, 937, 963, 1647, 1756, 1773, 1996
DpnI GATC 5 cut(s) 41, 600, 886, 1060, 1458
DpnII GATC 5 cut(s) 39, 598, 884, 1058, 1456
DraIII CACNNNGTG 2 cut(s) 157, 1418
EaeI YGGCCR 1 cut(s) 1965
Eam1104I CTCTTC 2 cut(s) 660, 1235
EarI CTCTTC 2 cut(s) 660, 1235
Ecl136II GAGCTC 2 cut(s) 533, 1613
Eco130I CCWWGG 2 cut(s) 100, 2099
Eco24I GRGCYC 4 cut(s) 535, 655, 1615, 1936
Eco31I GGTCTC 1 cut(s) 1440
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 4 cut(s) 52, 470, 856, 1205
Eco53kI GAGCTC 2 cut(s) 533, 1613
Eco57I CTGAAG 4 cut(s) 968, 1177, 1520, 1731
Eco81I CCTNAGG 1 cut(s) 1773
Eco88I CYCGRG 3 cut(s) 137, 1329, 1935
Eco91I GGTNACC 1 cut(s) 2103
EcoICRI GAGCTC 2 cut(s) 533, 1613
EcoO65I GGTNACC 1 cut(s) 2103
EcoRI GAATTC 3 cut(s) 439, 703, 1224
EcoRV GATATC 1 cut(s) 1042
EcoT14I CCWWGG 2 cut(s) 100, 2099
EcoT38I GRGCYC 4 cut(s) 535, 655, 1615, 1936
ErhI CCWWGG 2 cut(s) 100, 2099
FalI AAGNNNNNCTT 2 cut(s) 1518, 1550
FaqI GGGAC 4 cut(s) 198, 378, 812, 1636
FbaI TGATCA 1 cut(s) 598
FokI GGATG 7 cut(s) 196, 824, 1049, 1081, 1123, 1258, 1668
FriOI GRGCYC 4 cut(s) 535, 655, 1615, 1936
FspBI CTAG 6 cut(s) 741, 765, 1466, 1473, 1725, 1877
FspI TGCGCA 1 cut(s) 1005
GlaI GCGC 1 cut(s) 1005
GsaI CCCAGC 3 cut(s) 928, 1110, 1124
GsuI CTGGAG 2 cut(s) 1445, 1538
HaeIII GGCC 4 cut(s) 135, 935, 1967, 1976
HapII CCGG 7 cut(s) 630, 664, 708, 1274, 1730, 1936, 1958
HhaI GCGC 1 cut(s) 1006
Hin6I GCGC 1 cut(s) 1004
HinP1I GCGC 1 cut(s) 1004
HindIII AAGCTT 2 cut(s) 842, 1882
HinfI GANTC 7 cut(s) 5, 160, 391, 774, 792, 1805, 1982
HpaII CCGG 7 cut(s) 630, 664, 708, 1274, 1730, 1936, 1958
HphI GGTGA 5 cut(s) 650, 825, 1126, 1404, 1595
Hpy166II GTNNAC 6 cut(s) 470, 833, 973, 1117, 1270, 1424
Hpy188III TCNNGA 7 cut(s) 503, 1214, 1370, 1436, 1493, 1586, 1594
Hpy8I GTNNAC 6 cut(s) 470, 833, 973, 1117, 1270, 1424
HpyAV CCTTC 9 cut(s) 103, 169, 237, 246, 253, 989, 1351, 1557, 1695
HpyCH4III ACNGT 7 cut(s) 467, 623, 1100, 1282, 1789, 1820, 1829
HpyCH4IV ACGT 2 cut(s) 414, 1179
HpyCH4V TGCA 7 cut(s) 753, 781, 917, 1579, 1681, 1952, 2003
HpyF3I CTNAG 7 cut(s) 881, 937, 963, 1647, 1756, 1773, 1996
HpySE526I ACGT 2 cut(s) 414, 1179
HspAI GCGC 1 cut(s) 1004
KpnI GGTACC 1 cut(s) 1736
Ksp22I TGATCA 1 cut(s) 598
Kzo9I GATC 5 cut(s) 39, 598, 884, 1058, 1456
LguI GCTCTTC 1 cut(s) 660
LweI GCATC 6 cut(s) 991, 1315, 1609, 1690, 1981, 2078
MaeI CTAG 6 cut(s) 741, 765, 1466, 1473, 1725, 1877
MaeII ACGT 2 cut(s) 414, 1179
MaeIII GTNAC 5 cut(s) 1258, 1410, 1705, 1820, 2103
MalI GATC 5 cut(s) 41, 600, 886, 1060, 1458
MboI GATC 5 cut(s) 39, 598, 884, 1058, 1456
MflI RGATCY 1 cut(s) 884
MhlI GDGCHC 5 cut(s) 535, 655, 1615, 1893, 1936
MluCI AATT 7 cut(s) 439, 703, 1049, 1186, 1224, 1636, 2094
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 1 cut(s) 225
MroXI GAANNNNTTC 1 cut(s) 876
MseI TTAA 3 cut(s) 1635, 2016, 2085
MslI CAYNNNNRTG 1 cut(s) 786
MspA1I CMGCKG 2 cut(s) 1154, 2000
MspI CCGG 7 cut(s) 630, 664, 708, 1274, 1730, 1936, 1958
MspR9I CCNGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
Mva1269I GAATGC 1 cut(s) 1952
MvnI CGCG 1 cut(s) 1964
NciI CCSGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
NcoI CCATGG 1 cut(s) 100
NdeII GATC 5 cut(s) 39, 598, 884, 1058, 1456
NlaIV GGNNCC 8 cut(s) 54, 136, 408, 472, 628, 1734, 1813, 1933
NmuCI GTSAC 2 cut(s) 1410, 1820
NsbI TGCGCA 1 cut(s) 1005
NspI RCATGY 1 cut(s) 1501
NspV TTCGAA 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 1329
PciI ACATGT 1 cut(s) 1497
PciSI GCTCTTC 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 471
PctI GAATGC 1 cut(s) 1952
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 6 cut(s) 5, 160, 774, 792, 1805, 1982
PflFI GACNNNGTC 1 cut(s) 1862
PflMI CCANNNNNTGG 3 cut(s) 590, 827, 931
PfoI TCCNGGA 1 cut(s) 629
PleI GAGTC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 399
PscI ACATGT 1 cut(s) 1497
PshBI ATTAAT 1 cut(s) 1635
Psp124BI GAGCTC 2 cut(s) 535, 1615
PspEI GGTNACC 1 cut(s) 2103
PspFI CCCAGC 3 cut(s) 924, 1106, 1120
PspN4I GGNNCC 8 cut(s) 54, 136, 408, 472, 628, 1734, 1813, 1933
PspPI GGNCC 5 cut(s) 52, 134, 470, 856, 1205
PspXI VCTCGAGB 1 cut(s) 1329
PstI CTGCAG 2 cut(s) 919, 1581
PsuI RGATCY 1 cut(s) 884
PsyI GACNNNGTC 1 cut(s) 1862
PvuII CAGCTG 2 cut(s) 1154, 2000
RsaI GTAC 6 cut(s) 734, 749, 1271, 1379, 1423, 1734
RsaNI GTAC 6 cut(s) 733, 748, 1270, 1378, 1422, 1733
RseI CAYNNNNRTG 1 cut(s) 786
SacI GAGCTC 2 cut(s) 535, 1615
SapI GCTCTTC 1 cut(s) 660
SaqAI TTAA 3 cut(s) 1635, 2016, 2085
Sau3AI GATC 5 cut(s) 39, 598, 884, 1058, 1456
Sau96I GGNCC 5 cut(s) 52, 134, 470, 856, 1205
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 6 cut(s) 631, 709, 1274, 1936, 1937, 1958
SduI GDGCHC 5 cut(s) 535, 655, 1615, 1893, 1936
SfaNI GCATC 6 cut(s) 991, 1315, 1609, 1690, 1981, 2078
SfcI CTRYAG 4 cut(s) 769, 915, 1577, 1794
SfiI GGCCNNNNNGGCC 1 cut(s) 1973
Sfr274I CTCGAG 1 cut(s) 1329
SfuI TTCGAA 1 cut(s) 364
SinI GGWCC 4 cut(s) 52, 470, 856, 1205
SlaI CTCGAG 1 cut(s) 1329
SmaI CCCGGG 1 cut(s) 1937
SmiMI CAYNNNNRTG 1 cut(s) 786
SmlI CTYRAG 8 cut(s) 34, 164, 292, 485, 845, 1126, 1329, 1491
SmoI CTYRAG 8 cut(s) 34, 164, 292, 485, 845, 1126, 1329, 1491
Sse9I AATT 7 cut(s) 439, 703, 1049, 1186, 1224, 1636, 2094
SsiI CCGC 4 cut(s) 642, 661, 1017, 1964
SspMI CTAG 6 cut(s) 741, 765, 1466, 1473, 1725, 1877
SstI GAGCTC 2 cut(s) 535, 1615
StyD4I CCNGG 6 cut(s) 629, 707, 1272, 1934, 1935, 1956
StyI CCWWGG 2 cut(s) 100, 2099
TaaI ACNGT 7 cut(s) 467, 623, 1100, 1282, 1789, 1820, 1829
TaiI ACGT 2 cut(s) 417, 1182
TaqI TCGA 4 cut(s) 272, 364, 1057, 1330
TasI AATT 7 cut(s) 439, 703, 1049, 1186, 1224, 1636, 2094
TatI WGTACW 2 cut(s) 732, 1377
TauI GCSGC 2 cut(s) 1019, 1967
TfiI GAWTC 6 cut(s) 5, 160, 774, 792, 1805, 1982
Tru1I TTAA 3 cut(s) 1635, 2016, 2085
Tru9I TTAA 3 cut(s) 1635, 2016, 2085
TscAI CASTG 7 cut(s) 685, 1825, 1834, 1873, 1975, 2046, 2064
TseFI GTSAC 2 cut(s) 1410, 1820
Tsp45I GTSAC 2 cut(s) 1410, 1820
TspDTI ATGAA 9 cut(s) 27, 414, 432, 452, 885, 1109, 1677, 1682, 1974
TspGWI ACGGA 1 cut(s) 664
TspMI CCCGGG 1 cut(s) 1935
TspRI CASTG 7 cut(s) 685, 1825, 1834, 1873, 1975, 2046, 2064
Tth111I GACNNNGTC 1 cut(s) 1862
Van91I CCANNNNNTGG 3 cut(s) 590, 827, 931
VpaK11BI GGWCC 4 cut(s) 52, 470, 856, 1205
VspI ATTAAT 1 cut(s) 1635
XapI RAATTY 5 cut(s) 439, 703, 1049, 1224, 2094
XceI RCATGY 1 cut(s) 1501
XcmI CCANNNNNNNNNTGG 1 cut(s) 2056
XhoI CTCGAG 1 cut(s) 1329
XmaI CCCGGG 1 cut(s) 1935
XmnI GAANNNNTTC 1 cut(s) 876
XspI CTAG 6 cut(s) 741, 765, 1466, 1473, 1725, 1877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.