Prupe.2G026000_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001189
Physical Location & Seq
Forward (+)
2684722 .. 2689792
5071 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G026000.1

Sequence Viewer

Length: 2250 bp
ATGGATTCCTATGAAGCTACAAGGATTGTTTTTGCAAGGATCCAAAACTTGGACCCAGAAAATGCTTCCAGAATCATGGGTCTGCTTCTGATACAAGATCATGGTGAGAAAGAAATGATAAGGTTGGCTTTTGGCCCTGAAGCTTTTCTCCACTCAGTGATTCTCAAGGCAAGGAAAGAGTTGGGAGTGCCCATATCAAACTCTCCTTCTACACCTTCCACACCTTCTTCACCCTCCCCCTTTCTTTCCACTAACCCAATCACTATCTCGAGGCAAAACTCTACTTCCTCGTCTTCCAGACTCTCTCTCTCCATTCCAAACCCATCTTCTTCCTCTGCTTCAGCTTCTTGGGCTGCTCTCTCTGAGCTTAGAAACCAAGAAGAAAATAATTTGATCATGAGCCCCAGCAGCAACATAGCTCTCAATGGGTCCTCTTCATCATCTTCCATGATGAATTCCTCCTTACCCTTCTATGGAAATGGAGGGACTGATGTGATTGATGAGTTTCAGCTTCAAGAGCAGCTCTCTTTCCTCAACGATGGCTCTCCAGCACTTGGGCCCAAATCAACTGATTTTTTCTACCCCCAAACTGACTTGTCTTCAAGTCCTACCAATGGTTCTGATCCAGCCCTTTTCTCCTCTTACCATGGCTCTGCAAATTGGGGCGGTGGTGGTGGTGGGCCCCTCCACCGGAGAAGCTGCTCTGTCAGTGATGTGTGCTCAGAGGACCCAAACTCTGCTGGGTTTGGTTGGAAACCCTGCTTGTATTTTGCAAGAGGCTACTGCAAGAATGGAACCAGCTGCAGGTTCTTGCATGGTGGAGGACTTGGGGACTCTGTTGTCGATGGTGGTGGTCAAATGGCTGTTGGGTCACCGAGCAAGCTCGAGATGATGGACCAGTCATGCCATGAAGCACTTCTCAGATCTAAAACTGCTCAACAGCAACAGCAAAGACTTGCTGCTGCTTCTCAGCTCATGGCCTCAGCTAACTCCTTCCCTTATTCCTCTAAGTGCATGAACTTCCTTCTTCAGCAGCAACAAACCGATGCCCAAAGGGCTGCAGCTGCTGCTGCCTTAATGATGGGTGATGATATGCACAAATTCAGTCGATCCCGGCTCGAAAGAACGGATTTTTCGATGAATGGTGGTGGGGCAGGAATGGTGAACCCAGCTTCAAGGCAAATTTACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAGGAAGATGTCTCAAACTATTTCAGCATTTATGGGCCGGTTCAAGATGTGAGAATCCCATATCAGCAGAAGAGGATGTTTGGTTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCTCATTTTGGCCAAAGGGAACCCTCATTTCGTCTGTGATGCTAGGGTGCTGGTTAAGCCTTACAAGGAGAAGGGCAAAGTCCAGGACAAGAAACAACAGCAACAAGTGGACAGAGGAGATTTGTCTCCCTGTGGTACACCTACTGGCCTGGATTCTAGAGACCCTTATGATATCCAGCTAGGAGCAAGGATGTTTTACAATCCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCTGAGTTGCAGCAAGCACTTGAAATTCAAAGCCGAAGGTTAATGGGTCTGCAGCTTCTTGATGTGAAAAAGCATCACCACCGTTCTCTTTCTTCCAGCAGTCCCATTCAGTCCCCTACTCAGTCTCCAAGCATGTTTAATCAAAACCTAATGTTTCCTTCAATTCCCAATGGCCCAGAAGTTCCGCAAGAGAACTCTACCCCGATGCCACCCACTGCTTCAGAAGTGGATGACGATCAGTTGCTTAAGGAAGCAGCTCATGTTGTGTTAGGTAAAGAAGTAATGGCCAACAATGATGAAAAGGGCAGTGGCTGTGGCAGTGGCAATGCCAATGCCAATGGAAATGGCGAGGAGAGCCCCCGCGATAATGTCAATAACTTGCTTGAAAGCTTGGAGCACAACCTTCCTGATAGTCCTTTCGCGTCTCCAACGAAAGGCGCCGGTGAGTACACGTCCTCCTTCCCCAGTGGGACTACTGAGGCCAATGACTCCGATGCCTCAGCTGCTAACATGAACTTGGCCACTTCACTACTCCCAGCAGCTTCAACACTCGACATGGCGTCCTTCAAGTCTTTCAACTGCCAAATTCCAAGGTTGTCCTCTGGCCATGGAACCATAGGAGGGATGTATGGGGGCACAGGAGCTGGACCGAAGTGCCCGGTTGGAACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 Torus zf-CCCH

Protein Analysis

750

Amino Acids

80.58

Weight (kDa)

5.62

Isoelectric Point (pI)

58.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
Acc36I ACCTGC 1 cut(s) 795
AccB1I GGYRCC 1 cut(s) 2012
AccB7I CCANNNNNTGG 2 cut(s) 49, 554
AccII CGCG 2 cut(s) 1938, 1997
AciI CCGC 3 cut(s) 666, 1760, 1936
AclWI GGATC 4 cut(s) 34, 47, 617, 1104
AcoI YGGCCR 4 cut(s) 1344, 1860, 2094, 2179
AcsI RAATTY 5 cut(s) 454, 1100, 1182, 1599, 2160
AcuI CTGAAG 4 cut(s) 159, 324, 1013, 1779
AcyI GRCGYC 2 cut(s) 2013, 2135
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 3 cut(s) 1319, 1471, 2024
AfiI CCNNNNNNNGG 8 cut(s) 49, 473, 554, 614, 690, 804, 2009, 2196
AflII CTTAAG 1 cut(s) 1820
AflIII ACRYGT 2 cut(s) 1545, 2025
AhdI GACNNNNNGTC 1 cut(s) 2134
AjiI CACGTC 1 cut(s) 2028
AjnI CCWGG 2 cut(s) 1416, 1482
AjuI GAANNNNNNNTTGG 4 cut(s) 310, 342, 1325, 1357
Alw21I GWGCWC 2 cut(s) 722, 1974
Alw26I GTCTC 6 cut(s) 1234, 1319, 1464, 1488, 1704, 2004
AlwI GGATC 4 cut(s) 34, 47, 617, 1104
AlwNI CAGNNNCTG 3 cut(s) 1067, 1887, 2219
Ama87I CYCGRG 2 cut(s) 268, 884
ApaI GGGCCC 2 cut(s) 561, 684
ApoI RAATTY 5 cut(s) 454, 1100, 1182, 1599, 2160
Asp700I GAANNNNTTC 2 cut(s) 144, 915
AspLEI GCGC 1 cut(s) 2015
AsuC2I CCSGG 3 cut(s) 1114, 1322, 2234
AsuHPI GGTGA 7 cut(s) 116, 222, 864, 1097, 1174, 1643, 2030
AvaI CYCGRG 2 cut(s) 268, 884
AvaII GGWCC 5 cut(s) 52, 429, 727, 895, 2222
BaeGI GKGCMC 5 cut(s) 192, 561, 684, 2213, 2234
BalI TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 1 cut(s) 2012
BanII GRGCYC 4 cut(s) 404, 561, 684, 1934
BbsI GAAGAC 2 cut(s) 285, 591
Bbv12I GWGCWC 2 cut(s) 722, 1974
BbvCI CCTCAGC 2 cut(s) 982, 2074
BccI CCATC 5 cut(s) 331, 533, 839, 886, 1075
BciT130I CCWGG 2 cut(s) 1418, 1484
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 3 cut(s) 1114, 1322, 2234
BcoDI GTCTC 6 cut(s) 1234, 1319, 1464, 1488, 1704, 2004
BfaI CTAG 3 cut(s) 1377, 1491, 1514
BfmI CTRYAG 3 cut(s) 802, 1059, 1625
BfoI RGCGCY 1 cut(s) 2016
BfrI CTTAAG 1 cut(s) 1820
BfuAI ACCTGC 1 cut(s) 795
BglI GCCNNNNNGGC 1 cut(s) 1055
BglII AGATCT 1 cut(s) 923
Bme1390I CCNGG 5 cut(s) 1114, 1322, 1418, 1484, 2234
Bme18I GGWCC 5 cut(s) 52, 429, 727, 895, 2222
BmeRI GACNNNNNGTC 1 cut(s) 2134
BmeT110I CYCGRG 2 cut(s) 268, 884
BmgBI CACGTC 1 cut(s) 2028
BmrFI CCNGG 5 cut(s) 1114, 1322, 1418, 1484, 2234
BmrI ACTGGG 1 cut(s) 2034
BmsI GCATC 5 cut(s) 1036, 1363, 1657, 1770, 2059
BmuI ACTGGG 1 cut(s) 2034
BpiI GAAGAC 2 cut(s) 285, 591
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpmI CTGGAG 2 cut(s) 531, 1586
Bpu10I CCTNAGC 2 cut(s) 982, 2074
BpuEI CTTGAG 2 cut(s) 149, 1524
BpuMI CCSGG 3 cut(s) 1114, 1322, 2234
BsaBI GATNNNNATC 1 cut(s) 1809
BsaHI GRCGYC 2 cut(s) 2013, 2135
BsaI GGTCTC 1 cut(s) 1488
BsaJI CCNNGG 3 cut(s) 646, 2165, 2182
BsaWI WCCGGW 1 cut(s) 690
BsaXI ACNNNNNCTCC 4 cut(s) 1684, 1714, 2015, 2045
Bsc4I CCNNNNNNNGG 8 cut(s) 49, 473, 554, 614, 690, 804, 2009, 2196
Bse118I RCCGGY 2 cut(s) 1255, 2015
Bse1I ACTGG 3 cut(s) 898, 1483, 2040
Bse3DI GCAATG 1 cut(s) 1906
Bse8I GATNNNNATC 1 cut(s) 1809
BseBI CCWGG 2 cut(s) 1418, 1484
BseDI CCNNGG 3 cut(s) 646, 2165, 2182
BseGI GGATG 4 cut(s) 1299, 1530, 1810, 2205
BseJI GATNNNNATC 1 cut(s) 1809
BseLI CCNNNNNNNGG 8 cut(s) 49, 473, 554, 614, 690, 804, 2009, 2196
BseMI GCAATG 1 cut(s) 1906
BseNI ACTGG 3 cut(s) 898, 1483, 2040
BseRI GAGGAG 5 cut(s) 628, 1464, 1570, 1583, 1940
BseSI GKGCMC 5 cut(s) 192, 561, 684, 2213, 2234
BseYI CCCAGC 4 cut(s) 404, 740, 1168, 2110
Bsh1236I CGCG 2 cut(s) 1938, 1997
BshNI GGYRCC 1 cut(s) 2012
BsiHKAI GWGCWC 2 cut(s) 722, 1974
BsiHKCI CYCGRG 2 cut(s) 268, 884
BsiSI CCGG 6 cut(s) 691, 1114, 1256, 1322, 2016, 2234
BslFI GGGAC 5 cut(s) 499, 845, 1662, 1672, 2059
BslI CCNNNNNNNGG 8 cut(s) 49, 473, 554, 614, 690, 804, 2009, 2196
BsmAI GTCTC 6 cut(s) 1234, 1319, 1464, 1488, 1704, 2004
BsmBI CGTCTC 1 cut(s) 2004
BsmFI GGGAC 5 cut(s) 499, 845, 1662, 1672, 2059
Bso31I GGTCTC 1 cut(s) 1488
BsoBI CYCGRG 2 cut(s) 268, 884
Bsp120I GGGCCC 2 cut(s) 557, 680
Bsp1286I GDGCHC 9 cut(s) 192, 404, 561, 684, 722, 1934, 1974, 2213, 2234
Bsp143I GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
Bsp19I CCATGG 2 cut(s) 646, 2182
BspACI CCGC 3 cut(s) 666, 1760, 1936
BspFNI CGCG 2 cut(s) 1938, 1997
BspHI TCATGA 1 cut(s) 396
BspMAI CTGCAG 3 cut(s) 806, 1063, 1629
BspMI ACCTGC 1 cut(s) 795
BspPI GGATC 4 cut(s) 34, 47, 617, 1104
BspT107I GGYRCC 1 cut(s) 2012
BspTI CTTAAG 1 cut(s) 1820
BspTNI GGTCTC 1 cut(s) 1488
BsrDI GCAATG 1 cut(s) 1906
BsrFI RCCGGY 2 cut(s) 1255, 2015
BsrI ACTGG 3 cut(s) 898, 1483, 2040
BssAI RCCGGY 2 cut(s) 1255, 2015
BssECI CCNNGG 3 cut(s) 646, 2165, 2182
BssMI GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
BssNI GRCGYC 2 cut(s) 2013, 2135
BssT1I CCWWGG 3 cut(s) 646, 2165, 2182
Bst2UI CCWGG 2 cut(s) 1418, 1484
Bst4CI ACNGT 2 cut(s) 1330, 1658
Bst6I CTCTTC 2 cut(s) 439, 1283
BstACI GRCGYC 2 cut(s) 2013, 2135
BstAFI CTTAAG 1 cut(s) 1820
BstAPI GCANNNNNTGC 1 cut(s) 1067
BstC8I GCNNGC 3 cut(s) 881, 1575, 1590
BstDSI CCRYGG 2 cut(s) 646, 2182
BstEII GGTNACC 1 cut(s) 870
BstF5I GGATG 4 cut(s) 1299, 1530, 1810, 2205
BstFNI CGCG 2 cut(s) 1938, 1997
BstH2I RGCGCY 1 cut(s) 2016
BstHHI GCGC 1 cut(s) 2015
BstKTI GATC 7 cut(s) 42, 100, 396, 625, 926, 1112, 1813
BstMAI GTCTC 6 cut(s) 1234, 1319, 1464, 1488, 1704, 2004
BstMBI GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
BstNI CCWGG 2 cut(s) 1418, 1484
BstNSI RCATGY 2 cut(s) 1549, 1711
BstPI GGTNACC 1 cut(s) 870
BstSCI CCNGG 5 cut(s) 1112, 1320, 1416, 1482, 2232
BstSFI CTRYAG 3 cut(s) 802, 1059, 1625
BstSLI GKGCMC 5 cut(s) 192, 561, 684, 2213, 2234
BstUI CGCG 2 cut(s) 1938, 1997
BstV2I GAAGAC 2 cut(s) 285, 591
BstX2I RGATCY 2 cut(s) 39, 923
BstXI CCANNNNNNTGG 1 cut(s) 76
BstYI RGATCY 2 cut(s) 39, 923
BtgI CCRYGG 2 cut(s) 646, 2182
BtrI CACGTC 1 cut(s) 2028
BtsCI GGATG 4 cut(s) 1299, 1530, 1810, 2205
BtsI GCAGTG 3 cut(s) 1788, 1888, 1900
BtsIMutI CAGTG 6 cut(s) 162, 715, 1788, 1888, 1900, 2047
BveI ACCTGC 1 cut(s) 795
Cac8I GCNNGC 3 cut(s) 881, 1575, 1590
CaiI CAGNNNCTG 3 cut(s) 1067, 1887, 2219
CciI TCATGA 1 cut(s) 396
CfoI GCGC 1 cut(s) 2015
Cfr10I RCCGGY 2 cut(s) 1255, 2015
CseI GACGC 2 cut(s) 1986, 2124
Csp6I GTAC 3 cut(s) 1318, 1470, 2023
CviQI GTAC 3 cut(s) 1318, 1470, 2023
DinI GGCGCC 1 cut(s) 2014
DpnI GATC 7 cut(s) 41, 99, 395, 624, 925, 1111, 1812
DpnII GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
DraIII CACNNNGTG 1 cut(s) 157
DrdI GACNNNNNNGTC 1 cut(s) 839
DriI GACNNNNNGTC 1 cut(s) 2134
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 4 cut(s) 1344, 1860, 2094, 2179
Eam1104I CTCTTC 2 cut(s) 439, 1283
Eam1105I GACNNNNNGTC 1 cut(s) 2134
EarI CTCTTC 2 cut(s) 439, 1283
Eco130I CCWWGG 3 cut(s) 646, 2165, 2182
Eco24I GRGCYC 4 cut(s) 404, 561, 684, 1934
Eco31I GGTCTC 1 cut(s) 1488
Eco32I GATATC 1 cut(s) 1507
Eco47I GGWCC 5 cut(s) 52, 429, 727, 895, 2222
Eco57I CTGAAG 4 cut(s) 159, 324, 1013, 1779
Eco88I CYCGRG 2 cut(s) 268, 884
Eco91I GGTNACC 1 cut(s) 870
EcoO109I RGGNCCY 3 cut(s) 429, 681, 727
EcoO65I GGTNACC 1 cut(s) 870
EcoRI GAATTC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 1416, 1482
EcoRV GATATC 1 cut(s) 1507
EcoT14I CCWWGG 3 cut(s) 646, 2165, 2182
EcoT38I GRGCYC 4 cut(s) 404, 561, 684, 1934
EgeI GGCGCC 1 cut(s) 2014
EheI GGCGCC 1 cut(s) 2014
ErhI CCWWGG 3 cut(s) 646, 2165, 2182
Esp3I CGTCTC 1 cut(s) 2004
FalI AAGNNNNNCTT 2 cut(s) 112, 144
FaqI GGGAC 5 cut(s) 499, 845, 1662, 1672, 2059
FauI CCCGC 1 cut(s) 1943
FbaI TGATCA 1 cut(s) 393
FokI GGATG 4 cut(s) 1306, 1537, 1817, 2212
FriOI GRGCYC 4 cut(s) 404, 561, 684, 1934
FspBI CTAG 3 cut(s) 1377, 1491, 1514
GlaI GCGC 1 cut(s) 2014
GsaI CCCAGC 4 cut(s) 408, 744, 1172, 2114
GsuI CTGGAG 2 cut(s) 531, 1586
HaeII RGCGCY 1 cut(s) 2016
HapII CCGG 6 cut(s) 691, 1114, 1256, 1322, 2016, 2234
HgaI GACGC 2 cut(s) 1986, 2124
HhaI GCGC 1 cut(s) 2015
Hin1I GRCGYC 2 cut(s) 2013, 2135
Hin6I GCGC 1 cut(s) 2013
HinP1I GCGC 1 cut(s) 2013
HindIII AAGCTT 2 cut(s) 141, 1963
HinfI GANTC 8 cut(s) 5, 72, 160, 300, 833, 1272, 1487, 2063
HpaII CCGG 6 cut(s) 691, 1114, 1256, 1322, 2016, 2234
HphI GGTGA 7 cut(s) 116, 222, 864, 1097, 1174, 1643, 2030
Hpy166II GTNNAC 5 cut(s) 1165, 1318, 1444, 1472, 2025
Hpy188I TCNGA 8 cut(s) 90, 364, 622, 724, 923, 1217, 1798, 2068
Hpy8I GTNNAC 5 cut(s) 1165, 1318, 1444, 1472, 2025
HpyCH4III ACNGT 2 cut(s) 1330, 1658
HpyCH4IV ACGT 1 cut(s) 2027
HpySE526I ACGT 1 cut(s) 2027
Hsp92I GRCGYC 2 cut(s) 2013, 2135
HspAI GCGC 1 cut(s) 2013
KasI GGCGCC 1 cut(s) 2012
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
LmnI GCTCC 4 cut(s) 1517, 1570, 1969, 2216
LweI GCATC 5 cut(s) 1036, 1363, 1657, 1770, 2059
MaeI CTAG 3 cut(s) 1377, 1491, 1514
MaeII ACGT 1 cut(s) 2027
MaeIII GTNAC 2 cut(s) 870, 1306
MalI GATC 7 cut(s) 41, 99, 395, 624, 925, 1111, 1812
MboI GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
MflI RGATCY 2 cut(s) 39, 923
MhlI GDGCHC 9 cut(s) 192, 404, 561, 684, 722, 1934, 1974, 2213, 2234
MlsI TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
MluCI AATT 8 cut(s) 388, 454, 658, 1100, 1182, 1599, 1737, 2160
MluNI TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
Mly113I GGCGCC 1 cut(s) 2013
MlyI GAGTC 3 cut(s) 294, 827, 2057
MmeI TCCRAC 3 cut(s) 731, 2027, 2218
Mox20I TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
MroXI GAANNNNTTC 2 cut(s) 144, 915
MscI TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
MseI TTAA 5 cut(s) 1076, 1389, 1616, 1713, 1821
Msp20I TGGCCA 4 cut(s) 1346, 1862, 2096, 2181
MspA1I CMGCKG 4 cut(s) 801, 1064, 1202, 2078
MspCI CTTAAG 1 cut(s) 1820
MspI CCGG 6 cut(s) 691, 1114, 1256, 1322, 2016, 2234
MspR9I CCNGG 5 cut(s) 1114, 1322, 1418, 1484, 2234
MvaI CCWGG 2 cut(s) 1418, 1484
MvnI CGCG 2 cut(s) 1938, 1997
NarI GGCGCC 1 cut(s) 2013
NciI CCSGG 3 cut(s) 1114, 1322, 2234
NcoI CCATGG 2 cut(s) 646, 2182
NdeII GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
NmuCI GTSAC 1 cut(s) 870
NspI RCATGY 2 cut(s) 1549, 1711
PaeR7I CTCGAG 2 cut(s) 268, 884
PagI TCATGA 1 cut(s) 396
PciI ACATGT 1 cut(s) 1545
PcsI WCGNNNNNNNCGW 1 cut(s) 1133
PdmI GAANNNNTTC 2 cut(s) 144, 915
PfeI GAWTC 5 cut(s) 5, 72, 160, 1272, 1487
PflMI CCANNNNNTGG 2 cut(s) 49, 554
PfoI TCCNGGA 1 cut(s) 1416
PleI GAGTC 3 cut(s) 294, 827, 2057
PluTI GGCGCC 1 cut(s) 2016
PpsI GAGTC 3 cut(s) 294, 827, 2057
PpuMI RGGWCCY 2 cut(s) 429, 727
PscI ACATGT 1 cut(s) 1545
Psp5II RGGWCCY 2 cut(s) 429, 727
Psp6I CCWGG 2 cut(s) 1416, 1482
PspEI GGTNACC 1 cut(s) 870
PspFI CCCAGC 4 cut(s) 404, 740, 1168, 2110
PspGI CCWGG 2 cut(s) 1416, 1482
PspOMI GGGCCC 2 cut(s) 557, 680
PspPPI RGGWCCY 2 cut(s) 429, 727
PstI CTGCAG 3 cut(s) 806, 1063, 1629
PstNI CAGNNNCTG 3 cut(s) 1067, 1887, 2219
PsuI RGATCY 2 cut(s) 39, 923
PvuII CAGCTG 4 cut(s) 801, 1064, 1202, 2078
RsaI GTAC 3 cut(s) 1319, 1471, 2024
RsaNI GTAC 3 cut(s) 1318, 1470, 2023
SaqAI TTAA 5 cut(s) 1076, 1389, 1616, 1713, 1821
Sau3AI GATC 7 cut(s) 39, 97, 393, 622, 923, 1109, 1810
SchI GAGTC 3 cut(s) 294, 827, 2057
ScrFI CCNGG 5 cut(s) 1114, 1322, 1418, 1484, 2234
SduI GDGCHC 9 cut(s) 192, 404, 561, 684, 722, 1934, 1974, 2213, 2234
SfaNI GCATC 5 cut(s) 1036, 1363, 1657, 1770, 2059
SfcI CTRYAG 3 cut(s) 802, 1059, 1625
SfoI GGCGCC 1 cut(s) 2014
Sfr274I CTCGAG 2 cut(s) 268, 884
SgrAI CRCCGGYG 1 cut(s) 2015
SinI GGWCC 5 cut(s) 52, 429, 727, 895, 2222
SlaI CTCGAG 2 cut(s) 268, 884
SmlI CTYRAG 5 cut(s) 164, 268, 884, 1539, 1820
SmoI CTYRAG 5 cut(s) 164, 268, 884, 1539, 1820
Sse9I AATT 8 cut(s) 388, 454, 658, 1100, 1182, 1599, 1737, 2160
SsiI CCGC 3 cut(s) 666, 1760, 1936
SspDI GGCGCC 1 cut(s) 2012
SspMI CTAG 3 cut(s) 1377, 1491, 1514
StyD4I CCNGG 5 cut(s) 1112, 1320, 1416, 1482, 2232
StyI CCWWGG 3 cut(s) 646, 2165, 2182
TaaI ACNGT 2 cut(s) 1330, 1658
TaiI ACGT 1 cut(s) 2030
TaqI TCGA 7 cut(s) 269, 843, 885, 1108, 1119, 1136, 2127
TaqII GACCGA 1 cut(s) 2239
TasI AATT 8 cut(s) 388, 454, 658, 1100, 1182, 1599, 1737, 2160
TatI WGTACW 1 cut(s) 2022
TfiI GAWTC 5 cut(s) 5, 72, 160, 1272, 1487
Tru1I TTAA 5 cut(s) 1076, 1389, 1616, 1713, 1821
Tru9I TTAA 5 cut(s) 1076, 1389, 1616, 1713, 1821
TscAI CASTG 6 cut(s) 162, 715, 1795, 1888, 1900, 2047
TseFI GTSAC 1 cut(s) 870
Tsp45I GTSAC 1 cut(s) 870
TspDTI ATGAA 8 cut(s) 27, 426, 467, 924, 1031, 1154, 1887, 2102
TspGWI ACGGA 1 cut(s) 1142
TspRI CASTG 6 cut(s) 162, 715, 1795, 1888, 1900, 2047
Van91I CCANNNNNTGG 2 cut(s) 49, 554
Vha464I CTTAAG 1 cut(s) 1820
VpaK11BI GGWCC 5 cut(s) 52, 429, 727, 895, 2222
XapI RAATTY 5 cut(s) 454, 1100, 1182, 1599, 2160
XbaI TCTAGA 1 cut(s) 1490
XceI RCATGY 2 cut(s) 1549, 1711
XhoI CTCGAG 2 cut(s) 268, 884
XmnI GAANNNNTTC 2 cut(s) 144, 915
XspI CTAG 3 cut(s) 1377, 1491, 1514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.