Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001189

Physical Location & Seq

Genomic Coordinates Reverse (-)

53887957 .. 53891885

Gene Structure 3929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG351100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGATTCATACGAAGCTACCAGGATCGTTTTCTCAAGGATCCAGAGCTTGGATTCAGAAAATGCATCAAAAATCATGGGGTACCTTTTGATTCAAGACCAGGGTGAGAAGGAGATGATACGCTTAGCATTTGGACCAGAGACTCTGCTTCACAATCTCATCATCAATGCCAAAACCCATCTGGGTCTTGTTCACTCCAAGACTCCATCTTTCAACCCCATTTCCAGGCCCAACTCACTTCCTCTTTCATCTTCTCCAACCTCAAATCTTTGGAGCCTCAGCAACCCCATTAGTCCCAGCTCGACTTGTTCACCTACTTATGCCAATGTTGTTAGCAAAAACACTAACCTTGCTTCTGGATCTTTATCGCCATCCATCAATGACTCTTCTAGTGCTACTGAGCTTGTTGACAACTTCCAGTTTTCTTTCCTCAATGATCCCAAAACGGACGAGGAGTTTTTCGATGGAGGCCCCGAAGGTGTTTATGGTAATTCCTCGATGAACAAGCAGAGCTACTCTGCTCACTGCGGCTGTGCTTTTGGTTCTGAAGATGTGAATTCCGGGCTCGGATGGAAACCATGTTCGTATTTTGCAAGAGGGTTCTGTAAAAACGGAAGTAGTTGCCGTTTTCTCCACAGTGATGGCTTGCCTGGAAATGTCAGTATGCTTGAGCAGTGTGAAGACTTGCTCAGATCCAATGCTGCTGCCCAGCAACACAAACTTGCTACAGTGTCACAGTTCATGTCCAATGGTTCTTCTTTGCCTTACAACAGGTGCCTCAACTTTCTTATGCAACAACAAAATGACACCCAAAGGTCATTGATGATGGGAGAAGAGCTTCTCAAGTTTGGGAGATACCAACATGAGAGAAATGACATTTCGAGTTTGGGTGGAAATGTAATTCCCAGTTCAAGGCAGATCTACTTGACATTCCCAGCTGATAGTACATTTAGAGAAGAAGATGTCTCTAATTATTTCAACATGTTTGGACCTGTGCAAGATGTGAGGATTCCATACCAGCAGAAGAGAATGTTTGGGTTCGTTACATTTGTATATTCAGAAACTGTGAGGATCATTTTGGCCAAAGGGAACCCTCATTTTGTATGTGATTCTCGGGTGCTTGTGAAGCCTTATAAGGAGAAGGGGAAAATACCAGACAGGAAGCTGCACCAACATTTGGAGAGGGGAGACTATTCTCTGTGTTCAAGCCTATCTGGGCTTGATTCTAGGGAGCCTTATGACTTCAATCTTGGATCAAGAATGTATTACAGTACCCAAGAGATGCTGTTGCGAAGGAAATTAGAGGACCAAGCGAACTTGGAGCAAGCTATTGAACTCCAAGAAAGAAGACTTACGAATATGCAACTTCTAGGCATCAAGAATAACAATCATCATCAATACTATCAAGGTCTATCAGAAGGGTCTCCATTTCCCTCCCCAACGTTCTCACATGCAGCTAAAAATCAATCCCTCACAGATGTCTCAGAAGCCTCAGTCATTTCCCAAAGTTATGCTTTAGATGGTGAACAACAAGAAGAGGAGAAGAGTGGCAAGGACCAATCCAATGCTGAAGAGTGTGACCTGCATCAAAGTGTGGAGCACATTCTCCCTGATAACCTGTTTGCTTCACCAGCAGTAGTAGCTGGAGACCACATAAATGTCTTCTCAACTGCTTCTGCGCCATTCAATGAAAGCACCTCAGCAATATCTTCTTCTTCTAATAGCAATAGCAATAATTTACTGCCAACCGCTTCTACTTCTACGTCCAATGCAACTTCCCCAAAATCCGTTCTCTCCAGCTCAGGTTTTCTTTTGGGTATGGAACCACTGGAATGCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

613

Amino Acids

67.76

Weight (kDa)

5.44

Isoelectric Point (pI)

55.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PABC_AtC3H46	PF23182	1 - 65	4e-34	AtC3H46 PABC domain
zf-CCCH	PF00642	193 - 213	3.9e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51950 AT3G51950 AT3G51950 AT3G51950 AT3G63450 AT3G63450 AT3G63450 AT3G63450 AT3G63450 AT3G63450 AT3G63450
fragaria_vesca	FvH4_3g28430 FvH4_7g01970 FvH4_7g01970 FvH4_7g01970 FvH4_7g01970 FvH4_7g01970
malus_domestica	MD02G1298200.v1.1 MD03G1171800.v1.1 MD07G1025800.v1.1 MD09G1140400.v1.1 MD11G1189300.v1.1 MD13G1017100.v1.1
prunus_persica	Prupe.2G026000_v2.0.a1 Prupe.2G026000_v2.0.a1 Prupe.4G255100_v2.0.a1
pyrus_communis	pycom03g12890 pycom07g01970 pycom11g16570
rosa_chinensis	RchiOBHm_Chr1g0318971 RchiOBHm_Chr5g0053281
rosa_laevigata	RLG00000030513 RLG00000034773
rosa_multiflora	Rmu_sc0001966.1_g000024 Rmu_sc0006626.1_g000005 Rmu_sc0028062.1_g000001 Rmu_sc0034847.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029000 Rroxscaffold_4G00328730
rosa_rugosa	Rorug01G0026000 Rorug01G0026000 Rorug01G0026100 Rorug01G0026100 Rorug05G0267900 Rorug05G0267900 Rorug05G0268000 Rorug05G0268100
rosa_samantha	Rh1AG037900 Rh1BG034100 Rh1CG036900 Rh1DG033300 Rh5AG340400 Rh5BG351100 Rh5CG377500 Rh5DG365000
rosa_wichuraiana	Rw1G002920 Rw5G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1134
Acc36I	ACCTGC	1 cut(s)	1590
Acc65I	GGTACC	1 cut(s)	81
AccB1I	GGYRCC	2 cut(s)	81, 774
AccB7I	CCANNNNNTGG	2 cut(s)	49, 1177
AciI	CCGC	2 cut(s)	528, 1749
AclI	AACGTT	1 cut(s)	1442
AclWI	GGATC	8 cut(s)	32, 34, 47, 367, 431, 687, 1079, 1261
AcoI	YGGCCR	1 cut(s)	1080
AcsI	RAATTY	1 cut(s)	556
AcuI	CTGAAG	2 cut(s)	567, 1590
AfaI	GTAC	3 cut(s)	83, 946, 1273
AfiI	CCNNNNNNNGG	4 cut(s)	49, 225, 912, 1177
AflIII	ACRYGT	1 cut(s)	981
AgsI	TTSAA	8 cut(s)	95, 214, 912, 979, 1206, 1246, 1334, 1687
AjnI	CCWGG	4 cut(s)	20, 99, 224, 649
AloI	GAACNNNNNNTCC	2 cut(s)	565, 597
Alw21I	GWGCWC	1 cut(s)	1602
Alw26I	GTCTC	6 cut(s)	134, 970, 1182, 1428, 1486, 1641
AlwI	GGATC	8 cut(s)	32, 34, 47, 367, 431, 687, 1079, 1261
AlwNI	CAGNNNCTG	1 cut(s)	1064
Ama87I	CYCGRG	1 cut(s)	1113
AoxI	GGCC	3 cut(s)	227, 469, 1080
ApeKI	GCWGC	4 cut(s)	701, 704, 1165, 1454
ApoI	RAATTY	1 cut(s)	556
Asp700I	GAANNNNTTC	1 cut(s)	837
Asp718I	GGTACC	1 cut(s)	81
AspLEI	GCGC	1 cut(s)	1681
AspS9I	GGNCC	6 cut(s)	134, 228, 470, 989, 1306, 1555
AsuC2I	CCSGG	1 cut(s)	562
AsuHPI	GGTGA	4 cut(s)	116, 303, 1535, 1620
AvaI	CYCGRG	1 cut(s)	1113
AvaII	GGWCC	4 cut(s)	134, 989, 1306, 1555
BalI	TGGCCA	1 cut(s)	1082
BamHI	GGATCC	1 cut(s)	39
BanI	GGYRCC	2 cut(s)	81, 774
BanII	GRGCYC	1 cut(s)	567
BbsI	GAAGAC	3 cut(s)	687, 1354, 1654
Bbv12I	GWGCWC	1 cut(s)	1602
BbvCI	CCTCAGC	2 cut(s)	278, 1699
BbvI	GCAGC	4 cut(s)	688, 691, 1152, 1466
BccI	CCATC	9 cut(s)	186, 214, 379, 383, 458, 564, 635, 820, 1514
BceAI	ACGGC	1 cut(s)	609
BciT130I	CCWGG	4 cut(s)	22, 101, 226, 651
BcnI	CCSGG	1 cut(s)	562
BcoDI	GTCTC	6 cut(s)	134, 970, 1182, 1428, 1486, 1641
BfaI	CTAG	3 cut(s)	390, 1227, 1370
BfmI	CTRYAG	1 cut(s)	726
BfuAI	ACCTGC	1 cut(s)	1590
BglII	AGATCT	1 cut(s)	918
BisI	GCNGC	5 cut(s)	529, 702, 705, 1166, 1455
BlpI	GCTNAGC	1 cut(s)	124
BlsI	GCNGC	5 cut(s)	530, 703, 706, 1167, 1456
Bme1390I	CCNGG	5 cut(s)	22, 101, 226, 562, 651
Bme18I	GGWCC	4 cut(s)	134, 989, 1306, 1555
BmeT110I	CYCGRG	1 cut(s)	1113
BmgT120I	GGNCC	6 cut(s)	134, 228, 470, 989, 1306, 1555
BmiI	GGNNCC	8 cut(s)	41, 83, 275, 472, 776, 1091, 1233, 1824
BmrFI	CCNGG	5 cut(s)	22, 101, 226, 562, 651
BmrI	ACTGGG	1 cut(s)	900
BmsI	GCATC	4 cut(s)	74, 1272, 1383, 1594
BmuI	ACTGGG	1 cut(s)	900
BpiI	GAAGAC	3 cut(s)	687, 1354, 1654
BpmI	CTGGAG	2 cut(s)	1665, 1780
Bpu10I	CCTNAGC	3 cut(s)	278, 1699, 1801
Bpu1102I	GCTNAGC	1 cut(s)	124
BpuEI	CTTGAG	3 cut(s)	19, 689, 827
BpuMI	CCSGG	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	364
BsaI	GGTCTC	2 cut(s)	1428, 1641
BsaJI	CCNNGG	1 cut(s)	100
Bsc4I	CCNNNNNNNGG	4 cut(s)	49, 225, 912, 1177
Bse1I	ACTGG	3 cut(s)	418, 906, 1833
Bse8I	GATNNNNATC	1 cut(s)	364
BseBI	CCWGG	4 cut(s)	22, 101, 226, 651
BseDI	CCNNGG	1 cut(s)	100
BseGI	GGATG	2 cut(s)	371, 575
BseJI	GATNNNNATC	1 cut(s)	364
BseLI	CCNNNNNNNGG	4 cut(s)	49, 225, 912, 1177
BseMII	CTCAG	7 cut(s)	292, 390, 703, 1497, 1506, 1713, 1815
BseNI	ACTGG	3 cut(s)	418, 906, 1833
BseRI	GAGGAG	2 cut(s)	467, 1553
BseXI	GCAGC	4 cut(s)	688, 691, 1152, 1466
BseYI	CCCAGC	3 cut(s)	296, 708, 934
BsgI	GTGCAG	1 cut(s)	1151
BshFI	GGCC	3 cut(s)	229, 471, 1082
BshNI	GGYRCC	2 cut(s)	81, 774
BsiHKAI	GWGCWC	1 cut(s)	1602
BsiHKCI	CYCGRG	1 cut(s)	1113
BsiSI	CCGG	1 cut(s)	561
BslFI	GGGAC	1 cut(s)	279
BslI	CCNNNNNNNGG	4 cut(s)	49, 225, 912, 1177
BsmAI	GTCTC	6 cut(s)	134, 970, 1182, 1428, 1486, 1641
BsmFI	GGGAC	1 cut(s)	279
BsmI	GAATGC	1 cut(s)	1838
BsnI	GGCC	3 cut(s)	229, 471, 1082
Bso31I	GGTCTC	2 cut(s)	1428, 1641
BsoBI	CYCGRG	1 cut(s)	1113
Bsp1286I	GDGCHC	2 cut(s)	567, 1602
Bsp143I	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
Bsp1720I	GCTNAGC	1 cut(s)	124
BspACI	CCGC	2 cut(s)	528, 1749
BspANI	GGCC	3 cut(s)	229, 471, 1082
BspCNI	CTCAG	7 cut(s)	291, 391, 702, 1496, 1505, 1712, 1814
BspLI	GGNNCC	8 cut(s)	41, 83, 275, 472, 776, 1091, 1233, 1824
BspMI	ACCTGC	1 cut(s)	1590
BspPI	GGATC	8 cut(s)	32, 34, 47, 367, 431, 687, 1079, 1261
BspQI	GCTCTTC	1 cut(s)	828
BspT107I	GGYRCC	2 cut(s)	81, 774
BspTNI	GGTCTC	2 cut(s)	1428, 1641
BsrI	ACTGG	3 cut(s)	418, 906, 1833
BssECI	CCNNGG	1 cut(s)	100
BssMI	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
Bst2UI	CCWGG	4 cut(s)	22, 101, 226, 651
Bst4CI	ACNGT	5 cut(s)	638, 730, 738, 1066, 1271
Bst6I	CTCTTC	6 cut(s)	391, 828, 1019, 1530, 1538, 1566
BstC8I	GCNNGC	2 cut(s)	647, 1326
BstDEI	CTNAG	8 cut(s)	124, 278, 399, 689, 1483, 1492, 1699, 1801
BstF5I	GGATG	2 cut(s)	371, 575
BstHHI	GCGC	1 cut(s)	1681
BstKTI	GATC	8 cut(s)	27, 42, 362, 439, 695, 921, 1074, 1256
BstMAI	GTCTC	6 cut(s)	134, 970, 1182, 1428, 1486, 1641
BstMBI	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
BstMWI	GCNNNNNNNGC	3 cut(s)	1126, 1631, 1640
BstNI	CCWGG	4 cut(s)	22, 101, 226, 651
BstNSI	RCATGY	2 cut(s)	985, 1454
BstSCI	CCNGG	5 cut(s)	20, 99, 224, 560, 649
BstSFI	CTRYAG	1 cut(s)	726
BstV1I	GCAGC	4 cut(s)	688, 691, 1152, 1466
BstV2I	GAAGAC	3 cut(s)	687, 1354, 1654
BstX2I	RGATCY	4 cut(s)	39, 359, 692, 918
BstXI	CCANNNNNNTGG	1 cut(s)	641
BstYI	RGATCY	4 cut(s)	39, 359, 692, 918
BsuRI	GGCC	3 cut(s)	229, 471, 1082
BtsCI	GGATG	2 cut(s)	371, 575
BtsI	GCAGTG	2 cut(s)	523, 680
BtsIMutI	CAGTG	5 cut(s)	523, 643, 680, 735, 1826
BveI	ACCTGC	1 cut(s)	1590
Cac8I	GCNNGC	2 cut(s)	647, 1326
CaiI	CAGNNNCTG	1 cut(s)	1064
CfoI	GCGC	1 cut(s)	1681
Cfr13I	GGNCC	6 cut(s)	134, 228, 470, 989, 1306, 1555
Csp6I	GTAC	3 cut(s)	82, 945, 1272
CviAII	CATG	6 cut(s)	76, 579, 742, 863, 982, 1451
CviQI	GTAC	3 cut(s)	82, 945, 1272
DdeI	CTNAG	8 cut(s)	124, 278, 399, 689, 1483, 1492, 1699, 1801
DpnI	GATC	8 cut(s)	26, 41, 361, 438, 694, 920, 1073, 1255
DpnII	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
EaeI	YGGCCR	1 cut(s)	1080
Eam1104I	CTCTTC	6 cut(s)	391, 828, 1019, 1530, 1538, 1566
EarI	CTCTTC	6 cut(s)	391, 828, 1019, 1530, 1538, 1566
Eco24I	GRGCYC	1 cut(s)	567
Eco31I	GGTCTC	2 cut(s)	1428, 1641
Eco47I	GGWCC	4 cut(s)	134, 989, 1306, 1555
Eco57I	CTGAAG	2 cut(s)	567, 1590
Eco88I	CYCGRG	1 cut(s)	1113
EcoO109I	RGGNCCY	1 cut(s)	470
EcoRI	GAATTC	1 cut(s)	556
EcoRII	CCWGG	4 cut(s)	20, 99, 224, 649
EcoT22I	ATGCAT	1 cut(s)	67
EcoT38I	GRGCYC	1 cut(s)	567
FaeI	CATG	6 cut(s)	79, 582, 745, 866, 985, 1454
FalI	AAGNNNNNCTT	2 cut(s)	1498, 1530
FaqI	GGGAC	1 cut(s)	279
FatI	CATG	6 cut(s)	75, 578, 741, 862, 981, 1450
Fnu4HI	GCNGC	5 cut(s)	529, 702, 705, 1166, 1455
FokI	GGATG	2 cut(s)	358, 582
FriOI	GRGCYC	1 cut(s)	567
Fsp4HI	GCNGC	5 cut(s)	529, 702, 705, 1166, 1455
FspBI	CTAG	3 cut(s)	390, 1227, 1370
GlaI	GCGC	1 cut(s)	1680
GluI	GCNGC	5 cut(s)	529, 702, 705, 1166, 1455
GsaI	CCCAGC	3 cut(s)	300, 712, 938
GsuI	CTGGAG	2 cut(s)	1665, 1780
HaeIII	GGCC	3 cut(s)	229, 471, 1082
HapII	CCGG	1 cut(s)	561
HhaI	GCGC	1 cut(s)	1681
Hin1II	CATG	6 cut(s)	79, 582, 745, 866, 985, 1454
Hin6I	GCGC	1 cut(s)	1679
HinP1I	GCGC	1 cut(s)	1679
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HinfI	GANTC	9 cut(s)	5, 53, 91, 142, 202, 383, 1009, 1109, 1223
HpaII	CCGG	1 cut(s)	561
HphI	GGTGA	4 cut(s)	116, 303, 1535, 1620
Hpy166II	GTNNAC	4 cut(s)	193, 311, 409, 1526
Hpy188I	TCNGA	7 cut(s)	58, 547, 569, 692, 1060, 1417, 1486
Hpy188III	TCNNGA	5 cut(s)	43, 95, 357, 1257, 1378
Hpy8I	GTNNAC	4 cut(s)	193, 311, 409, 1526
HpyAV	CCTTC	5 cut(s)	103, 470, 1135, 1287, 1412
HpyCH4III	ACNGT	5 cut(s)	638, 730, 738, 1066, 1271
HpyCH4IV	ACGT	2 cut(s)	1442, 1763
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1126, 1631, 1640
HpyF3I	CTNAG	8 cut(s)	124, 278, 399, 689, 1483, 1492, 1699, 1801
HpySE526I	ACGT	2 cut(s)	1442, 1763
Hsp92II	CATG	6 cut(s)	79, 582, 745, 866, 985, 1454
HspAI	GCGC	1 cut(s)	1679
KpnI	GGTACC	1 cut(s)	85
Kzo9I	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
LguI	GCTCTTC	1 cut(s)	828
LmnI	GCTCC	4 cut(s)	273, 1231, 1321, 1597
Lsp1109I	GCAGC	4 cut(s)	688, 691, 1152, 1466
LweI	GCATC	4 cut(s)	74, 1272, 1383, 1594
MaeI	CTAG	3 cut(s)	390, 1227, 1370
MaeII	ACGT	2 cut(s)	1442, 1763
MaeIII	GTNAC	3 cut(s)	732, 1042, 1577
MalI	GATC	8 cut(s)	26, 41, 361, 438, 694, 920, 1073, 1255
MboI	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
MflI	RGATCY	4 cut(s)	39, 359, 692, 918
MhlI	GDGCHC	2 cut(s)	567, 1602
MlsI	TGGCCA	1 cut(s)	1082
MluCI	AATT	6 cut(s)	490, 556, 900, 970, 1298, 1735
MluNI	TGGCCA	1 cut(s)	1082
MlyI	GAGTC	3 cut(s)	136, 196, 377
MmeI	TCCRAC	1 cut(s)	281
Mox20I	TGGCCA	1 cut(s)	1082
Mph1103I	ATGCAT	1 cut(s)	67
MroXI	GAANNNNTTC	1 cut(s)	837
MscI	TGGCCA	1 cut(s)	1082
MslI	CAYNNNNRTG	4 cut(s)	639, 1590, 1656, 1831
Msp20I	TGGCCA	1 cut(s)	1082
MspA1I	CMGCKG	1 cut(s)	938
MspI	CCGG	1 cut(s)	561
MspR9I	CCNGG	5 cut(s)	22, 101, 226, 562, 651
Mva1269I	GAATGC	1 cut(s)	1838
MvaI	CCWGG	4 cut(s)	22, 101, 226, 651
MwoI	GCNNNNNNNGC	3 cut(s)	1126, 1631, 1640
NciI	CCSGG	1 cut(s)	562
NdeII	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
NlaIII	CATG	6 cut(s)	79, 582, 745, 866, 985, 1454
NlaIV	GGNNCC	8 cut(s)	41, 83, 275, 472, 776, 1091, 1233, 1824
NmuCI	GTSAC	2 cut(s)	732, 1577
NsiI	ATGCAT	1 cut(s)	67
NspI	RCATGY	2 cut(s)	985, 1454
PciI	ACATGT	1 cut(s)	981
PciSI	GCTCTTC	1 cut(s)	828
PctI	GAATGC	1 cut(s)	1838
PdmI	GAANNNNTTC	1 cut(s)	837
PfeI	GAWTC	6 cut(s)	5, 53, 91, 1009, 1109, 1223
PflMI	CCANNNNNTGG	2 cut(s)	49, 1177
PkrI	GCNGC	5 cut(s)	530, 703, 706, 1167, 1456
PleI	GAGTC	3 cut(s)	136, 196, 377
PpsI	GAGTC	3 cut(s)	136, 196, 377
PscI	ACATGT	1 cut(s)	981
PsiI	TTATAA	1 cut(s)	1134
Psp1406I	AACGTT	1 cut(s)	1442
Psp6I	CCWGG	4 cut(s)	20, 99, 224, 649
PspFI	CCCAGC	3 cut(s)	296, 708, 934
PspGI	CCWGG	4 cut(s)	20, 99, 224, 649
PspN4I	GGNNCC	8 cut(s)	41, 83, 275, 472, 776, 1091, 1233, 1824
PspPI	GGNCC	6 cut(s)	134, 228, 470, 989, 1306, 1555
PstNI	CAGNNNCTG	1 cut(s)	1064
PsuI	RGATCY	4 cut(s)	39, 359, 692, 918
PvuII	CAGCTG	1 cut(s)	938
RsaI	GTAC	3 cut(s)	83, 946, 1273
RsaNI	GTAC	3 cut(s)	82, 945, 1272
RseI	CAYNNNNRTG	4 cut(s)	639, 1590, 1656, 1831
SapI	GCTCTTC	1 cut(s)	828
SatI	GCNGC	5 cut(s)	529, 702, 705, 1166, 1455
Sau3AI	GATC	8 cut(s)	24, 39, 359, 436, 692, 918, 1071, 1253
Sau96I	GGNCC	6 cut(s)	134, 228, 470, 989, 1306, 1555
SchI	GAGTC	3 cut(s)	136, 196, 377
ScrFI	CCNGG	5 cut(s)	22, 101, 226, 562, 651
SduI	GDGCHC	2 cut(s)	567, 1602
SfaNI	GCATC	4 cut(s)	74, 1272, 1383, 1594
SfcI	CTRYAG	1 cut(s)	726
SinI	GGWCC	4 cut(s)	134, 989, 1306, 1555
SmiMI	CAYNNNNRTG	4 cut(s)	639, 1590, 1656, 1831
SmlI	CTYRAG	3 cut(s)	34, 668, 842
SmoI	CTYRAG	3 cut(s)	34, 668, 842
Sse9I	AATT	6 cut(s)	490, 556, 900, 970, 1298, 1735
SsiI	CCGC	2 cut(s)	528, 1749
SspMI	CTAG	3 cut(s)	390, 1227, 1370
StyD4I	CCNGG	5 cut(s)	20, 99, 224, 560, 649
TaaI	ACNGT	5 cut(s)	638, 730, 738, 1066, 1271
TaiI	ACGT	2 cut(s)	1445, 1766
TaqI	TCGA	4 cut(s)	302, 462, 497, 881
TasI	AATT	6 cut(s)	490, 556, 900, 970, 1298, 1735
TatI	WGTACW	1 cut(s)	944
TauI	GCSGC	1 cut(s)	531
TfiI	GAWTC	6 cut(s)	5, 53, 91, 1009, 1109, 1223
TscAI	CASTG	5 cut(s)	530, 643, 680, 735, 1833
TseFI	GTSAC	2 cut(s)	732, 1577
TseI	GCWGC	4 cut(s)	701, 704, 1165, 1454
Tsp45I	GTSAC	2 cut(s)	732, 1577
TspDTI	ATGAA	4 cut(s)	237, 515, 730, 1704
TspGWI	ACGGA	3 cut(s)	461, 627, 1777
TspRI	CASTG	5 cut(s)	530, 643, 680, 735, 1833
Van91I	CCANNNNNTGG	2 cut(s)	49, 1177
VpaK11BI	GGWCC	4 cut(s)	134, 989, 1306, 1555
XapI	RAATTY	1 cut(s)	556
XceI	RCATGY	2 cut(s)	985, 1454
XcmI	CCANNNNNNNNNTGG	1 cut(s)	178
XmnI	GAANNNNTTC	1 cut(s)	837
XspI	CTAG	3 cut(s)	390, 1227, 1370
Zsp2I	ATGCAT	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.