Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001473

Physical Location & Seq

Genomic Coordinates Forward (+)

15677651 .. 15681878

Gene Structure 4228 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g24320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGGGAAGTAAGGTGTTGCTCACTACTCGCTTTATAGATGTTGCTGTATACGCAGATCCAAGGAGCGTTCCGCATGAGCCGCGGATGTTAACAGACAACGAGAGCTTGGAACTGTTTCTCATGAAAACACGCCCGGGAGTGGTTGATATCCCCTCTAACTTGCAGACACTTGGAAAAAAGATGGTGGCTAAATGCGCTGGTCTGCCTCTGGCAGTAGTTGTGCTCGGAGGATTACTTTCCACTAAATCGGATGCGGAATGGGAGCGCGTCGTTGGAAACATCAGCTGGCATTTGCTCAGTGCTGAAGTTAGAGTCTCCTATATATTAGCCCTAAGCTACGACGACTTGCTTCCCCATTTAAAATCATGTTTTCACCATTTGGCGCTTTTTCCTGAAGATTCCAGCATAGAGAAAAAGTATTTGATTCGATTGTGGGTTGCCGAAGGATTCTTACCACAACAAGGACAAGAAATCGAAGAAGGGGTGGCTGAAAATTGCTTGAATGAGTTGCTTAATAGGTGCATGATCCAGGTGGCAACGCGAACATCTCTTGGCAACGTTAAAACCATTCGCATCCATGATGTTCTCAGAGATTTCTCTCTCACCAAGGGGAGGGAACATTTTCTTGAAATATTTACTGACCAAGGAAACGAGTCGACCTCAGCATCCCACCACTCGACCAAATTTCGAAGGATTGCGATCCACGCTGCACAATATCCGTATGAATTTCTAAACCCAATAACCCATTTACGCTCCCTCCATTTTTTCGGCGAGGATCATGAAAAGATGTACTGTACTCGCAAGAATTTTAAGTTGCTCAGGGTCTTAGAACTATATTGCAAGAATCGTAAGTGGAATGATCTCAGGGAATGTAGCGTAGTTGGGGACTTGATTCAATTGAGGTTTCTCAGGCTAAGAGGAGGGAAGAATGCATACAATACAAGCCTGTCGTCCTTGAAGAACCTGCAAACACTTGATATGAGATTTTGTGGTTCATATTTGATGTTCAAAGAGTTGAAGATACAGAATCTGAGACATCTACTCCTACCTGAACATTATCCAGTTGACTTAGCATTGGGTACCATGACCCATTTACAAACCCTAAAAGGCATAGAGGGTGGACGATGGATAGAAGATGGTTTGGCCAAAATGATCAATCTTCGACGACTGATGATAAGAACACTATCACGAGATGGGGTGACATTAGTGATTTCTATCGTTGAAAAGTTGCGCTACCTTCAATCGTTGTCGCTGACCAATCATGAATTTGGAGATGAATTATTTCCACCACTTGAAGGACTATCCCGGTGTGACCATCTTCAGAAGCTTCGTTTATGCGGAAAGCTAGAGAAGCTACCTCATGTAAATGGATTCCCACGAAACCTCATAAAGCTAGTTTTGATGAGATCCAACCTCCATAGAGATTCAATAGTTATATTAGAGAGGTTGCCAAACTTAAAGATGCTTTCCATGGAGTATGGATCATACCCCTTCAGGGAATTGGTTTGCTCCTCAGAAGGGTTTCCACAACTGCAATTTCTCCACTTAATTCAGGAGGATTTAGAGGTTTGGAGGGTGGAAGAAAGGGCACTGCAGAAGCTCAGGCAGCTAACCACAGTCCGTTGTTCAAAATTAAGGCAGTTGAGCCCCAAGGAGGGTAACCCGGAGCAAGATTTGGAGATGAACGGTCCATGTTGGCCGGCAATGGCGGTGAGAAAAGGTTTCGACAGGTTTGTTGGTGGTTGTTCTCCAGTGCGGCAATCCATATCTGTTGAATTCGATCGGCATGGTGGTTTCACTAGTGTTGGTGGTGGTGACAGCGAGCCTTGTGATGGTGAGTATGGCGGCGCTGCGGGTTGGGTGATGCTTGCTAGGGTTTCCTCCAAAGCCACATTGTTTGGGCTTAGTTGGGCTGCAGTTGTCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0023052 GO:0033554 GO:0034050 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

643

Amino Acids

73.08

Weight (kDa)

8.75

Isoelectric Point (pI)

46.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	129 - 199	7.1e-20	Disease resistance protein Winged helix domain
LRR_14	PF23598	249 - 547	1.5e-27	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001473)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46530 AT3G46710 AT3G46730
fragaria_vesca	FvH4_5g24310 FvH4_5g24320
malus_domestica	MD07G1251200.v1.1
prunus_persica	Prupe.2G274900_v2.0.a1 Prupe.2G274900_v2.0.a1 Prupe.6G153200_v2.0.a1 Prupe.6G153300_v2.0.a1 Prupe.6G153400_v2.0.a1 Prupe.8G127100_v2.0.a1 Prupe.8G127200_v2.0.a1 Prupe.8G127300_v2.0.a1
pyrus_communis	pycom07g22380
rosa_chinensis	RchiOBHm_Chr1g0339701 RchiOBHm_Chr5g0004521 RchiOBHm_Chr5g0004531 RchiOBHm_Chr7g0214541
rosa_laevigata	RLG00000002734
rosa_multiflora	Rmu_sc0003758.1_g000008 Rmu_sc0003919.1_g000021 Rmu_sc0004199.1_g000044 Rmu_sc0004199.1_g000045 Rmu_sc0004199.1_g000046 Rmu_ssc0000287.1_g000011
rosa_roxburghii	Rroxscaffold_1G00071000 Rroxscaffold_3G00245250 Rroxscaffold_3G00245260
rosa_rugosa	Rorug04G0412200 Rorug07G0146200 Rorug07G0146300 Rorug07G0146400
rosa_samantha	Rh1AG157700 Rh1CG147400 Rh5AG040000 Rh5BG039000 Rh5BG039100 Rh5BG039200 Rh5BG039400 Rh5CG043200 Rh5DG038900 Rh7AG281600 Rh7BG273500 Rh7BG273600 Rh7CG300900 Rh7CG301000 Rh7DG285700
rosa_wichuraiana	Rw1G013060 Rw5G003820 Rw7G024090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	972
Acc65I	GGTACC	1 cut(s)	1079
AccB1I	GGYRCC	1 cut(s)	1079
AccI	GTMKAC	2 cut(s)	48, 656
AccII	CGCG	3 cut(s)	82, 267, 541
AciI	CCGC	9 cut(s)	71, 80, 82, 254, 1338, 1709, 1756, 1845, 1853
AclI	AACGTT	1 cut(s)	558
AclWI	GGATC	6 cut(s)	50, 520, 694, 783, 1401, 1489
AcoI	YGGCCR	2 cut(s)	1143, 1697
AcsI	RAATTY	5 cut(s)	683, 725, 805, 1265, 1775
AcuI	CTGAAG	4 cut(s)	324, 414, 1304, 1477
AfaI	GTAC	3 cut(s)	791, 796, 1081
AfiI	CCNNNNNNNGG	9 cut(s)	139, 461, 612, 1295, 1495, 1518, 1654, 1655, 1832
AhlI	ACTAGT	1 cut(s)	1799
AjnI	CCWGG	1 cut(s)	528
AluBI	AGCT	9 cut(s)	105, 285, 336, 1327, 1345, 1354, 1393, 1600, 1609
AluI	AGCT	9 cut(s)	105, 285, 336, 1327, 1345, 1354, 1393, 1600, 1609
Alw21I	GWGCWC	1 cut(s)	225
Alw26I	GTCTC	2 cut(s)	319, 1027
AlwI	GGATC	6 cut(s)	50, 520, 694, 783, 1401, 1489
AlwNI	CAGNNNCTG	1 cut(s)	1030
Ama87I	CYCGRG	1 cut(s)	133
AoxI	GGCC	2 cut(s)	1143, 1697
ApeKI	GCWGC	4 cut(s)	707, 1606, 1850, 1913
ApoI	RAATTY	5 cut(s)	683, 725, 805, 1265, 1775
Asp700I	GAANNNNTTC	4 cut(s)	114, 621, 1281, 1521
Asp718I	GGTACC	1 cut(s)	1079
AspLEI	GCGC	5 cut(s)	197, 267, 385, 1233, 1850
AspS9I	GGNCC	1 cut(s)	1688
AsuC2I	CCSGG	4 cut(s)	134, 135, 1306, 1664
AsuHPI	GGTGA	7 cut(s)	365, 595, 1210, 1723, 1826, 1847, 1873
AsuII	TTCGAA	1 cut(s)	688
AvaI	CYCGRG	1 cut(s)	133
AvaII	GGWCC	1 cut(s)	1688
BaeGI	GKGCMC	1 cut(s)	1591
BalI	TGGCCA	1 cut(s)	1145
BanI	GGYRCC	1 cut(s)	1079
BanII	GRGCYC	1 cut(s)	1649
BarI	GAAGNNNNNNTAC	4 cut(s)	435, 467, 917, 949
BauI	CACGAG	1 cut(s)	1188
Bbv12I	GWGCWC	1 cut(s)	225
BbvCI	CCTCAGC	1 cut(s)	661
BbvI	GCAGC	4 cut(s)	694, 1618, 1837, 1900
BccI	CCATC	6 cut(s)	175, 1119, 1130, 1187, 1323, 1826
BciT130I	CCWGG	1 cut(s)	530
BclI	TGATCA	1 cut(s)	1152
BcnI	CCSGG	4 cut(s)	134, 135, 1306, 1664
BcoDI	GTCTC	2 cut(s)	319, 1027
BcuI	ACTAGT	1 cut(s)	1799
BfaI	CTAG	4 cut(s)	1346, 1394, 1800, 1872
BfmI	CTRYAG	2 cut(s)	1592, 1914
BfoI	RGCGCY	2 cut(s)	386, 1851
BfuAI	ACCTGC	1 cut(s)	972
BisI	GCNGC	7 cut(s)	80, 708, 1607, 1757, 1846, 1851, 1914
BlsI	GCNGC	7 cut(s)	81, 709, 1608, 1758, 1847, 1852, 1915
Bme1390I	CCNGG	5 cut(s)	134, 135, 530, 1306, 1664
Bme18I	GGWCC	1 cut(s)	1688
BmeT110I	CYCGRG	1 cut(s)	133
BmgT120I	GGNCC	1 cut(s)	1688
BmiI	GGNNCC	1 cut(s)	1081
BmrFI	CCNGG	5 cut(s)	134, 135, 530, 1306, 1664
BmsI	GCATC	5 cut(s)	241, 582, 674, 1452, 1854
BplI	GAGNNNNNCTC	2 cut(s)	644, 676
BpmI	CTGGAG	1 cut(s)	1734
Bpu10I	CCTNAGC	4 cut(s)	332, 661, 818, 1601
Bpu14I	TTCGAA	1 cut(s)	688
BpuMI	CCSGG	4 cut(s)	134, 135, 1306, 1664
BsaBI	GATNNNNATC	2 cut(s)	698, 1214
BsaJI	CCNNGG	7 cut(s)	59, 80, 133, 606, 643, 1470, 1650
BsaXI	ACNNNNNCTCC	4 cut(s)	741, 771, 1026, 1056
Bsc4I	CCNNNNNNNGG	9 cut(s)	139, 461, 612, 1295, 1495, 1518, 1654, 1655, 1832
Bse118I	RCCGGY	1 cut(s)	1699
Bse1I	ACTGG	2 cut(s)	1061, 1751
Bse3DI	GCAATG	1 cut(s)	1710
Bse8I	GATNNNNATC	2 cut(s)	698, 1214
BseBI	CCWGG	1 cut(s)	530
BseDI	CCNNGG	7 cut(s)	59, 80, 133, 606, 643, 1470, 1650
BseGI	GGATG	4 cut(s)	90, 256, 573, 665
BseJI	GATNNNNATC	2 cut(s)	698, 1214
BseLI	CCNNNNNNNGG	9 cut(s)	139, 461, 612, 1295, 1495, 1518, 1654, 1655, 1832
BseMI	GCAATG	1 cut(s)	1710
BseMII	CTCAG	9 cut(s)	310, 601, 675, 832, 877, 922, 1022, 1527, 1615
BseNI	ACTGG	2 cut(s)	1061, 1751
BseRI	GAGGAG	2 cut(s)	933, 1501
BseSI	GKGCMC	1 cut(s)	1591
BseXI	GCAGC	4 cut(s)	694, 1618, 1837, 1900
BsgI	GTGCAG	1 cut(s)	693
Bsh1236I	CGCG	3 cut(s)	82, 267, 541
Bsh1285I	CGRYCG	1 cut(s)	1783
BshFI	GGCC	2 cut(s)	1145, 1699
BshNI	GGYRCC	1 cut(s)	1079
BsiEI	CGRYCG	1 cut(s)	1783
BsiHKAI	GWGCWC	1 cut(s)	225
BsiHKCI	CYCGRG	1 cut(s)	133
BsiSI	CCGG	4 cut(s)	134, 1306, 1664, 1700
BslFI	GGGAC	1 cut(s)	899
BslI	CCNNNNNNNGG	9 cut(s)	139, 461, 612, 1295, 1495, 1518, 1654, 1655, 1832
BsmAI	GTCTC	2 cut(s)	319, 1027
BsmFI	GGGAC	1 cut(s)	899
BsmI	GAATGC	1 cut(s)	934
BsnI	GGCC	2 cut(s)	1145, 1699
BsoBI	CYCGRG	1 cut(s)	133
Bsp119I	TTCGAA	1 cut(s)	688
Bsp1286I	GDGCHC	3 cut(s)	225, 1591, 1649
Bsp143I	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
Bsp19I	CCATGG	1 cut(s)	1470
BspACI	CCGC	9 cut(s)	71, 80, 82, 254, 1338, 1709, 1756, 1845, 1853
BspANI	GGCC	2 cut(s)	1145, 1699
BspCNI	CTCAG	9 cut(s)	309, 600, 674, 831, 876, 921, 1023, 1526, 1614
BspFNI	CGCG	3 cut(s)	82, 267, 541
BspHI	TCATGA	3 cut(s)	120, 778, 1261
BspLI	GGNNCC	1 cut(s)	1081
BspMAI	CTGCAG	2 cut(s)	1596, 1918
BspMI	ACCTGC	1 cut(s)	972
BspPI	GGATC	6 cut(s)	50, 520, 694, 783, 1401, 1489
BspT104I	TTCGAA	1 cut(s)	688
BspT107I	GGYRCC	1 cut(s)	1079
BsrDI	GCAATG	1 cut(s)	1710
BsrFI	RCCGGY	1 cut(s)	1699
BsrI	ACTGG	2 cut(s)	1061, 1751
BssAI	RCCGGY	1 cut(s)	1699
BssECI	CCNNGG	7 cut(s)	59, 80, 133, 606, 643, 1470, 1650
BssMI	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
BssNAI	GTATAC	1 cut(s)	49
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	5 cut(s)	59, 606, 643, 1470, 1650
Bst1107I	GTATAC	1 cut(s)	49
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	1 cut(s)	530
Bst4CI	ACNGT	4 cut(s)	114, 794, 1618, 1688
BstBI	TTCGAA	1 cut(s)	688
BstC8I	GCNNGC	4 cut(s)	287, 1701, 1823, 1869
BstDSI	CCRYGG	2 cut(s)	80, 1470
BstEII	GGTNACC	1 cut(s)	1658
BstF5I	GGATG	4 cut(s)	90, 256, 573, 665
BstFNI	CGCG	3 cut(s)	82, 267, 541
BstH2I	RGCGCY	2 cut(s)	386, 1851
BstHHI	GCGC	5 cut(s)	197, 267, 385, 1233, 1850
BstKTI	GATC	9 cut(s)	58, 528, 702, 778, 862, 1155, 1409, 1484, 1783
BstMAI	GTCTC	2 cut(s)	319, 1027
BstMBI	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
BstMCI	CGRYCG	1 cut(s)	1783
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 79, 194, 704, 1351, 1606
BstNI	CCWGG	1 cut(s)	530
BstPI	GGTNACC	1 cut(s)	1658
BstSCI	CCNGG	5 cut(s)	132, 133, 528, 1304, 1662
BstSFI	CTRYAG	2 cut(s)	1592, 1914
BstSLI	GKGCMC	1 cut(s)	1591
BstUI	CGCG	3 cut(s)	82, 267, 541
BstV1I	GCAGC	4 cut(s)	694, 1618, 1837, 1900
BstX2I	RGATCY	2 cut(s)	55, 1406
BstYI	RGATCY	2 cut(s)	55, 1406
BstZ17I	GTATAC	1 cut(s)	49
BsuRI	GGCC	2 cut(s)	1145, 1699
BtgI	CCRYGG	2 cut(s)	80, 1470
BtsCI	GGATG	4 cut(s)	90, 256, 573, 665
BtsI	GCAGTG	1 cut(s)	1589
BtsIMutI	CAGTG	3 cut(s)	304, 1589, 1758
BveI	ACCTGC	1 cut(s)	972
Cac8I	GCNNGC	4 cut(s)	287, 1701, 1823, 1869
CaiI	CAGNNNCTG	1 cut(s)	1030
CciI	TCATGA	3 cut(s)	120, 778, 1261
CfoI	GCGC	5 cut(s)	197, 267, 385, 1233, 1850
Cfr10I	RCCGGY	1 cut(s)	1699
Cfr13I	GGNCC	1 cut(s)	1688
Cfr42I	CCGCGG	1 cut(s)	83
Cfr9I	CCCGGG	1 cut(s)	133
CseI	GACGC	1 cut(s)	256
Csp6I	GTAC	3 cut(s)	790, 795, 1080
CspCI	CAANNNNNGTGG	2 cut(s)	1879, 1914
CviQI	GTAC	3 cut(s)	790, 795, 1080
DpnI	GATC	9 cut(s)	57, 527, 701, 777, 861, 1154, 1408, 1483, 1782
DpnII	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
DraI	TTTAAA	1 cut(s)	360
EaeI	YGGCCR	2 cut(s)	1143, 1697
Eco130I	CCWWGG	5 cut(s)	59, 606, 643, 1470, 1650
Eco24I	GRGCYC	1 cut(s)	1649
Eco32I	GATATC	1 cut(s)	148
Eco47I	GGWCC	1 cut(s)	1688
Eco57I	CTGAAG	4 cut(s)	324, 414, 1304, 1477
Eco88I	CYCGRG	1 cut(s)	133
Eco91I	GGTNACC	1 cut(s)	1658
EcoO65I	GGTNACC	1 cut(s)	1658
EcoRI	GAATTC	1 cut(s)	1775
EcoRII	CCWGG	1 cut(s)	528
EcoRV	GATATC	1 cut(s)	148
EcoT14I	CCWWGG	5 cut(s)	59, 606, 643, 1470, 1650
EcoT22I	ATGCAT	1 cut(s)	934
EcoT38I	GRGCYC	1 cut(s)	1649
ErhI	CCWWGG	5 cut(s)	59, 606, 643, 1470, 1650
FaqI	GGGAC	1 cut(s)	899
FauI	CCCGC	1 cut(s)	1846
FbaI	TGATCA	1 cut(s)	1152
FblI	GTMKAC	2 cut(s)	48, 656
Fnu4HI	GCNGC	7 cut(s)	80, 708, 1607, 1757, 1846, 1851, 1914
FokI	GGATG	4 cut(s)	97, 263, 560, 652
FriOI	GRGCYC	1 cut(s)	1649
Fsp4HI	GCNGC	7 cut(s)	80, 708, 1607, 1757, 1846, 1851, 1914
FspBI	CTAG	4 cut(s)	1346, 1394, 1800, 1872
GlaI	GCGC	5 cut(s)	196, 266, 384, 1232, 1849
GluI	GCNGC	7 cut(s)	80, 708, 1607, 1757, 1846, 1851, 1914
GsuI	CTGGAG	1 cut(s)	1734
HaeII	RGCGCY	2 cut(s)	386, 1851
HaeIII	GGCC	2 cut(s)	1145, 1699
HapII	CCGG	4 cut(s)	134, 1306, 1664, 1700
HgaI	GACGC	1 cut(s)	256
HhaI	GCGC	5 cut(s)	197, 267, 385, 1233, 1850
Hin6I	GCGC	5 cut(s)	195, 265, 383, 1231, 1848
HinP1I	GCGC	5 cut(s)	195, 265, 383, 1231, 1848
HincII	GTYRAC	3 cut(s)	90, 657, 1066
HindII	GTYRAC	3 cut(s)	90, 657, 1066
HindIII	AAGCTT	1 cut(s)	1325
HpaI	GTTAAC	1 cut(s)	90
HpaII	CCGG	4 cut(s)	134, 1306, 1664, 1700
HphI	GGTGA	7 cut(s)	365, 595, 1210, 1723, 1826, 1847, 1873
Hpy166II	GTNNAC	5 cut(s)	49, 90, 657, 1066, 1121
Hpy188I	TCNGA	6 cut(s)	227, 250, 590, 1032, 1323, 1516
Hpy188III	TCNNGA	7 cut(s)	121, 392, 626, 779, 1188, 1262, 1553
Hpy8I	GTNNAC	5 cut(s)	49, 90, 657, 1066, 1121
Hpy99I	CGWCG	3 cut(s)	272, 344, 1167
HpyAV	CCTTC	7 cut(s)	437, 473, 684, 1247, 1289, 1501, 1511
HpyCH4III	ACNGT	4 cut(s)	114, 794, 1618, 1688
HpyCH4IV	ACGT	1 cut(s)	558
HpyCH4V	TGCA	9 cut(s)	163, 522, 710, 840, 932, 967, 1534, 1594, 1916
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 79, 194, 704, 1351, 1606
HpySE526I	ACGT	1 cut(s)	558
HspAI	GCGC	5 cut(s)	195, 265, 383, 1231, 1848
KpnI	GGTACC	1 cut(s)	1083
KroI	GCCGGC	1 cut(s)	1699
KroNI	GCCGGC	1 cut(s)	1701
Ksp22I	TGATCA	1 cut(s)	1152
KspAI	GTTAAC	1 cut(s)	90
KspI	CCGCGG	1 cut(s)	83
Kzo9I	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
LmnI	GCTCC	5 cut(s)	63, 262, 758, 1514, 1666
Lsp1109I	GCAGC	4 cut(s)	694, 1618, 1837, 1900
LweI	GCATC	5 cut(s)	241, 582, 674, 1452, 1854
MaeI	CTAG	4 cut(s)	1346, 1394, 1800, 1872
MaeII	ACGT	1 cut(s)	558
MaeIII	GTNAC	4 cut(s)	1198, 1310, 1658, 1814
MalI	GATC	9 cut(s)	57, 527, 701, 777, 861, 1154, 1408, 1483, 1782
MboI	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
MboII	GAAGA	9 cut(s)	407, 488, 937, 970, 1030, 1145, 1151, 1310, 1592
MfeI	CAATTG	1 cut(s)	896
MflI	RGATCY	2 cut(s)	55, 1406
MhlI	GDGCHC	3 cut(s)	225, 1591, 1649
MlsI	TGGCCA	1 cut(s)	1145
MluNI	TGGCCA	1 cut(s)	1145
MlyI	GAGTC	2 cut(s)	321, 662
MmeI	TCCRAC	2 cut(s)	253, 1434
Mox20I	TGGCCA	1 cut(s)	1145
Mph1103I	ATGCAT	1 cut(s)	934
MroNI	GCCGGC	1 cut(s)	1699
MroXI	GAANNNNTTC	4 cut(s)	114, 621, 1281, 1521
MscI	TGGCCA	1 cut(s)	1145
MseI	TTAA	8 cut(s)	89, 359, 513, 561, 810, 1457, 1547, 1634
MslI	CAYNNNNRTG	1 cut(s)	1365
Msp20I	TGGCCA	1 cut(s)	1145
MspA1I	CMGCKG	2 cut(s)	82, 285
MspI	CCGG	4 cut(s)	134, 1306, 1664, 1700
MspR9I	CCNGG	5 cut(s)	134, 135, 530, 1306, 1664
MunI	CAATTG	1 cut(s)	896
Mva1269I	GAATGC	1 cut(s)	934
MvaI	CCWGG	1 cut(s)	530
MvnI	CGCG	3 cut(s)	82, 267, 541
MwoI	GCNNNNNNNGC	6 cut(s)	50, 79, 194, 704, 1351, 1606
NaeI	GCCGGC	1 cut(s)	1701
NciI	CCSGG	4 cut(s)	134, 135, 1306, 1664
NcoI	CCATGG	1 cut(s)	1470
NdeII	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
NgoMIV	GCCGGC	1 cut(s)	1699
NlaIV	GGNNCC	1 cut(s)	1081
NmuCI	GTSAC	3 cut(s)	1198, 1310, 1814
NsiI	ATGCAT	1 cut(s)	934
NspV	TTCGAA	1 cut(s)	688
PagI	TCATGA	3 cut(s)	120, 778, 1261
PctI	GAATGC	1 cut(s)	934
PdiI	GCCGGC	1 cut(s)	1701
PdmI	GAANNNNTTC	4 cut(s)	114, 621, 1281, 1521
PfeI	GAWTC	8 cut(s)	398, 424, 447, 844, 892, 1027, 1371, 1424
PkrI	GCNGC	7 cut(s)	81, 709, 1608, 1758, 1847, 1852, 1915
Ple19I	CGATCG	1 cut(s)	1783
PleI	GAGTC	2 cut(s)	320, 661
PpsI	GAGTC	2 cut(s)	320, 661
Psp1406I	AACGTT	1 cut(s)	558
Psp6I	CCWGG	1 cut(s)	528
PspEI	GGTNACC	1 cut(s)	1658
PspGI	CCWGG	1 cut(s)	528
PspN4I	GGNNCC	1 cut(s)	1081
PspPI	GGNCC	1 cut(s)	1688
PstI	CTGCAG	2 cut(s)	1596, 1918
PstNI	CAGNNNCTG	1 cut(s)	1030
PsuI	RGATCY	2 cut(s)	55, 1406
PvuI	CGATCG	1 cut(s)	1783
PvuII	CAGCTG	1 cut(s)	285
RsaI	GTAC	3 cut(s)	791, 796, 1081
RsaNI	GTAC	3 cut(s)	790, 795, 1080
RseI	CAYNNNNRTG	1 cut(s)	1365
SacII	CCGCGG	1 cut(s)	83
SalI	GTCGAC	1 cut(s)	655
SaqAI	TTAA	8 cut(s)	89, 359, 513, 561, 810, 1457, 1547, 1634
SatI	GCNGC	7 cut(s)	80, 708, 1607, 1757, 1846, 1851, 1914
Sau3AI	GATC	9 cut(s)	55, 525, 699, 775, 859, 1152, 1406, 1481, 1780
Sau96I	GGNCC	1 cut(s)	1688
SchI	GAGTC	2 cut(s)	321, 662
ScrFI	CCNGG	5 cut(s)	134, 135, 530, 1306, 1664
SduI	GDGCHC	3 cut(s)	225, 1591, 1649
SfaNI	GCATC	5 cut(s)	241, 582, 674, 1452, 1854
SfcI	CTRYAG	2 cut(s)	1592, 1914
Sfr303I	CCGCGG	1 cut(s)	83
SfuI	TTCGAA	1 cut(s)	688
SgrBI	CCGCGG	1 cut(s)	83
SinI	GGWCC	1 cut(s)	1688
SmaI	CCCGGG	1 cut(s)	135
SmiMI	CAYNNNNRTG	1 cut(s)	1365
SpeI	ACTAGT	1 cut(s)	1799
SsiI	CCGC	9 cut(s)	71, 80, 82, 254, 1338, 1709, 1756, 1845, 1853
SspI	AATATT	1 cut(s)	633
SspMI	CTAG	4 cut(s)	1346, 1394, 1800, 1872
StyD4I	CCNGG	5 cut(s)	132, 133, 528, 1304, 1662
StyI	CCWWGG	5 cut(s)	59, 606, 643, 1470, 1650
TaaI	ACNGT	4 cut(s)	114, 794, 1618, 1688
TaiI	ACGT	1 cut(s)	561
TaqI	TCGA	8 cut(s)	427, 474, 656, 677, 688, 1162, 1725, 1779
TatI	WGTACW	2 cut(s)	789, 794
TauI	GCSGC	3 cut(s)	82, 1759, 1848
TfiI	GAWTC	8 cut(s)	398, 424, 447, 844, 892, 1027, 1371, 1424
Tru1I	TTAA	8 cut(s)	89, 359, 513, 561, 810, 1457, 1547, 1634
Tru9I	TTAA	8 cut(s)	89, 359, 513, 561, 810, 1457, 1547, 1634
TscAI	CASTG	3 cut(s)	304, 1596, 1758
TseFI	GTSAC	3 cut(s)	1198, 1310, 1814
TseI	GCWGC	4 cut(s)	707, 1606, 1850, 1913
Tsp45I	GTSAC	3 cut(s)	1198, 1310, 1814
TspDTI	ATGAA	7 cut(s)	137, 738, 795, 984, 1278, 1290, 1697
TspGWI	ACGGA	2 cut(s)	708, 1610
TspMI	CCCGGG	1 cut(s)	133
TspRI	CASTG	3 cut(s)	304, 1596, 1758
VpaK11BI	GGWCC	1 cut(s)	1688
XapI	RAATTY	5 cut(s)	683, 725, 805, 1265, 1775
XmaI	CCCGGG	1 cut(s)	133
XmiI	GTMKAC	2 cut(s)	48, 656
XmnI	GAANNNNTTC	4 cut(s)	114, 621, 1281, 1521
XspI	CTAG	4 cut(s)	1346, 1394, 1800, 1872
Zsp2I	ATGCAT	1 cut(s)	934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.