Prupe.6G153200_v2.0.a1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
13329804 .. 13332017
2214 bp
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UTR
Exon/CDS
Intron
Prupe.6G153200.1

Sequence Viewer

Length: 1812 bp
ATGCAACAAGCAGCAACATCACAAAGTTTATGGGAAAAAGTTGTAATGACAATCCATGATCACAAAGTCAAGAGGAAAATTGAAAATATCCAATCCACGATCGACCACATTTCTAAGCAAAAGGACAGTTTTGGCATTGCCAGCATCGCTTCACCGAAGGGAGGTCAAGGGATCATTTCTATGAATGAGAGGCTGCGATGGTGGAGGCGGCCATTAACCCATACTGAGGAAGATGATTTGGTTGATCTTGTAGAAGACACTGAGGCATTGCTAACACAGCTATCTAGGACCGAGGTGCCGAGTGGTTTCTATTGTACAGTACAGAAGAAGACTCTGCGAAGAATCATCAAAGATGTAAATGCTCAAAATATAGGTGATTTGGAGGAAGTAGAAGAAGAGATGGAAGTTTGGGAAAGTTTGGAAGCTGCATTTCCTACTAGTGGAATGGCAGGAAGTAAGGTGATGCTGACAACCCGTAACAGGGAGGTTGCCTTACATGCAGATGCAAGGAGCACTCCCCATGAGCCGCGAATGCTGACAGAGGATGAAAGCCTGGAATTGTTTCGCAAGAAAGCACTCCTGGGAATGGATCATTTTCCCTCCGACTTGAAGAATCTGGGAAGAGAGATGGTGACGAAATGCGGAGGTCTACCCTTGGCAGCGGTGGTGCTTGGAGGATTAGTATCCAGGAAAATGAAGACTAGAGAGGAATGGGAACACCAGAAGGATTCTTACCCCCAACAAGGGGAAGATAAAGCAGAAGGTGTTGCTGAAAATTGCTTGAACGAGTTGATTAATAGGTGCATGATCCAAGTGGGAACTCTGACCTCACTTGGGAGGGTTAAGACCATCGGCATCCATGATCTTCTTAGAGACTTCTCTCTCTGTGTATCGAGGGAAGAAAATTTTATTGGAATTATACTGGTCGTGAAGTTGAATCATCAGTTTCCCCATCAACCAAATCTGGAAGAATTGCGTTACATTCTAACCATACGCAACATGGTTTCCTACACACCTTTCCTAAATCCATATGCTCCCCATTTACGATCCCTTCATTTTTTCAACTGCTTTCAACATCCAGACTTCTATTTTATTAAAAAGGATTTCAAGTTGCTGAAGGTCTTGGATCTAAAGCATGCAATAGGATCCTCAGACACACCTAGTGCTATAGGGATCCTAATTCAGTTGAGGTATCTTGGAGTGAGCCAGATTCTTAAAAATTGCTACATCCCACCATCGATTGGAAACTTGAAGAACCTAGAGACACTGGATTTGGGATCTTCTTATTCACCCATCCCCAATGTCATTTGGAAGATGAAACGTTTGAGGCATTTACAGACCCTAAAAACTACATGGGCTGGAAGATGGATAGAAGATGGTGGCTTAGCCAACATGATCAGTCTACGACGACTGGGAATAGAAAGATTATCACTAGAAAAGGTAAACTTGGTGATTTCAATCCTAAAGAGAATGTGCTACCTGCAATCATTGTGGCTGGAGGTGATGAACAAGGAAACATTCCCAACATCCATGGGCCTCTCTCATTTCCAACATCTCCACAAGCTGTGTTTAAAGGGGAAAATAGAGAAGTTACCTCATGTATGTGAATTGCAGCCAAACCTCGTCAAGCTAAGTTTGATTGGTTCTGAGCTCCAGAAAGATTCGATAGTTCAACTAGAAAGGTTGCCATACCTGAAGATGCTTGTCTTGGGGAACCAATCCTACAAATGGAGGGAACTGGAATGGGCAGTGGAAGACAATGCAATGATGAAGCTCGAGCATCTAAAGATAGAAAGTTGCCTAAAACTGTAA

Protein Analysis

604

Amino Acids

69.13

Weight (kDa)

8.46

Isoelectric Point (pI)

51.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1488
AccB1I GGYRCC 1 cut(s) 295
AccB7I CCANNNNNTGG 1 cut(s) 1241
AccI GTMKAC 2 cut(s) 649, 1402
AccII CGCG 1 cut(s) 529
AciI CCGC 4 cut(s) 208, 527, 642, 662
AclI AACGTT 1 cut(s) 1321
AcoI YGGCCR 1 cut(s) 209
AcsI RAATTY 1 cut(s) 904
AcuI CTGAAG 2 cut(s) 1136, 1715
AdeI CACNNNGTG 1 cut(s) 1163
AfaI GTAC 2 cut(s) 316, 321
AhlI ACTAGT 1 cut(s) 437
AjnI CCWGG 3 cut(s) 552, 579, 686
AjuI GAANNNNNNNTTGG 2 cut(s) 894, 926
AluBI AGCT 6 cut(s) 280, 425, 1564, 1630, 1651, 1774
AluI AGCT 6 cut(s) 280, 425, 1564, 1630, 1651, 1774
Alw21I GWGCWC 2 cut(s) 515, 1653
Alw26I GTCTC 2 cut(s) 867, 1256
Ama87I CYCGRG 1 cut(s) 1775
AoxI GGCC 2 cut(s) 209, 1534
ApeKI GCWGC 5 cut(s) 11, 193, 425, 659, 1612
ApoI RAATTY 1 cut(s) 904
ArsI GACNNNNNNTTYG 2 cut(s) 1255, 1287
AseI ATTAAT 1 cut(s) 795
Asp700I GAANNNNTTC 1 cut(s) 561
AspS9I GGNCC 2 cut(s) 288, 1534
AsuHPI GGTGA 7 cut(s) 144, 386, 472, 643, 1281, 1462, 1513
AvaI CYCGRG 1 cut(s) 1775
AvaII GGWCC 1 cut(s) 288
BamHI GGATCC 2 cut(s) 1145, 1173
BanI GGYRCC 1 cut(s) 295
BanII GRGCYC 1 cut(s) 1653
BarI GAAGNNNNNNTAC 2 cut(s) 716, 748
BbsI GAAGAC 4 cut(s) 261, 335, 704, 1761
Bbv12I GWGCWC 2 cut(s) 515, 1653
BbvI GCAGC 5 cut(s) 23, 180, 412, 671, 1624
BccI CCATC 9 cut(s) 192, 394, 622, 857, 960, 1243, 1301, 1359, 1370
BciT130I CCWGG 3 cut(s) 554, 581, 688
BciVI GTATCC 1 cut(s) 694
BclI TGATCA 2 cut(s) 58, 1395
BcoDI GTCTC 2 cut(s) 867, 1256
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 7 cut(s) 285, 438, 702, 1161, 1259, 1433, 1676
BfmI CTRYAG 1 cut(s) 1167
BfuAI ACCTGC 1 cut(s) 1488
BfuI GTATCC 1 cut(s) 694
BisI GCNGC 7 cut(s) 12, 194, 209, 426, 527, 660, 1613
BlpI GCTNAGC 1 cut(s) 1384
BlsI GCNGC 7 cut(s) 13, 195, 210, 427, 528, 661, 1614
Bme1390I CCNGG 3 cut(s) 554, 581, 688
Bme18I GGWCC 1 cut(s) 288
BmeT110I CYCGRG 1 cut(s) 1775
BmgT120I GGNCC 2 cut(s) 288, 1534
BmiI GGNNCC 4 cut(s) 297, 1147, 1175, 1715
BmrFI CCNGG 3 cut(s) 554, 581, 688
BmrI ACTGGG 1 cut(s) 1421
BmsI GCATC 6 cut(s) 153, 453, 493, 864, 1689, 1789
BmuI ACTGGG 1 cut(s) 1421
BpiI GAAGAC 4 cut(s) 261, 335, 704, 1761
BpmI CTGGAG 2 cut(s) 1517, 1637
Bpu1102I GCTNAGC 1 cut(s) 1384
Bsa29I ATCGAT 1 cut(s) 1238
BsaBI GATNNNNATC 2 cut(s) 682, 1457
BsaJI CCNNGG 4 cut(s) 291, 580, 654, 1530
BsaXI ACNNNNNCTCC 2 cut(s) 666, 696
Bse1I ACTGG 4 cut(s) 927, 1272, 1416, 1743
Bse3DI GCAATG 3 cut(s) 135, 266, 1770
Bse8I GATNNNNATC 2 cut(s) 682, 1457
BseBI CCWGG 3 cut(s) 554, 581, 688
BseCI ATCGAT 1 cut(s) 1238
BseDI CCNNGG 4 cut(s) 291, 580, 654, 1530
BseGI GGATG 6 cut(s) 550, 855, 1075, 1227, 1293, 1526
BseJI GATNNNNATC 2 cut(s) 682, 1457
BseMI GCAATG 3 cut(s) 135, 266, 1770
BseMII CTCAG 4 cut(s) 216, 252, 1164, 1638
BseNI ACTGG 4 cut(s) 927, 1272, 1416, 1743
BseXI GCAGC 5 cut(s) 23, 180, 412, 671, 1624
Bsh1236I CGCG 1 cut(s) 529
Bsh1285I CGRYCG 1 cut(s) 102
BshFI GGCC 2 cut(s) 211, 1536
BshNI GGYRCC 1 cut(s) 295
BshVI ATCGAT 1 cut(s) 1238
BsiEI CGRYCG 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 515, 1653
BsiHKCI CYCGRG 1 cut(s) 1775
BsmAI GTCTC 2 cut(s) 867, 1256
BsmI GAATGC 1 cut(s) 537
BsnI GGCC 2 cut(s) 211, 1536
BsoBI CYCGRG 1 cut(s) 1775
Bsp1286I GDGCHC 2 cut(s) 515, 1653
Bsp1407I TGTACA 1 cut(s) 314
Bsp1720I GCTNAGC 1 cut(s) 1384
Bsp19I CCATGG 1 cut(s) 1530
BspACI CCGC 4 cut(s) 208, 527, 642, 662
BspANI GGCC 2 cut(s) 211, 1536
BspCNI CTCAG 4 cut(s) 217, 253, 1163, 1639
BspDI ATCGAT 1 cut(s) 1238
BspFNI CGCG 1 cut(s) 529
BspLI GGNNCC 4 cut(s) 297, 1147, 1175, 1715
BspMI ACCTGC 1 cut(s) 1488
BspT107I GGYRCC 1 cut(s) 295
BsrDI GCAATG 3 cut(s) 135, 266, 1770
BsrGI TGTACA 1 cut(s) 314
BsrI ACTGG 4 cut(s) 927, 1272, 1416, 1743
BssECI CCNNGG 4 cut(s) 291, 580, 654, 1530
BssT1I CCWWGG 2 cut(s) 654, 1530
Bst2UI CCWGG 3 cut(s) 554, 581, 688
Bst4CI ACNGT 3 cut(s) 128, 319, 1809
Bst6I CTCTTC 2 cut(s) 390, 616
BstAUI TGTACA 1 cut(s) 314
BstC8I GCNNGC 2 cut(s) 142, 1137
BstDEI CTNAG 8 cut(s) 114, 225, 261, 869, 1150, 1384, 1631, 1647
BstDSI CCRYGG 1 cut(s) 1530
BstF5I GGATG 6 cut(s) 550, 855, 1075, 1227, 1293, 1526
BstFNI CGCG 1 cut(s) 529
BstMAI GTCTC 2 cut(s) 867, 1256
BstMCI CGRYCG 1 cut(s) 102
BstMWI GCNNNNNNNGC 5 cut(s) 141, 146, 277, 497, 532
BstNI CCWGG 3 cut(s) 554, 581, 688
BstNSI RCATGY 2 cut(s) 500, 1139
BstSCI CCNGG 3 cut(s) 552, 579, 686
BstSFI CTRYAG 1 cut(s) 1167
BstUI CGCG 1 cut(s) 529
BstV1I GCAGC 5 cut(s) 23, 180, 412, 671, 1624
BstV2I GAAGAC 4 cut(s) 261, 335, 704, 1761
BstX2I RGATCY 4 cut(s) 1126, 1145, 1173, 1277
BstYI RGATCY 4 cut(s) 1126, 1145, 1173, 1277
Bsu15I ATCGAT 1 cut(s) 1238
BsuI GTATCC 1 cut(s) 694
BsuRI GGCC 2 cut(s) 211, 1536
BsuTUI ATCGAT 1 cut(s) 1238
BtgI CCRYGG 1 cut(s) 1530
BtgZI GCGATG 2 cut(s) 130, 211
BtsCI GGATG 6 cut(s) 550, 855, 1075, 1227, 1293, 1526
BtsI GCAGTG 1 cut(s) 1755
BtsIMutI CAGTG 3 cut(s) 258, 1265, 1755
BveI ACCTGC 1 cut(s) 1488
Cac8I GCNNGC 2 cut(s) 142, 1137
Cfr13I GGNCC 2 cut(s) 288, 1534
ClaI ATCGAT 1 cut(s) 1238
Csp6I GTAC 2 cut(s) 315, 320
CspCI CAANNNNNGTGG 2 cut(s) 1472, 1507
CviQI GTAC 2 cut(s) 315, 320
DdeI CTNAG 8 cut(s) 114, 225, 261, 869, 1150, 1384, 1631, 1647
DraI TTTAAA 1 cut(s) 1572
DraIII CACNNNGTG 1 cut(s) 1163
EaeI YGGCCR 1 cut(s) 209
Eam1104I CTCTTC 2 cut(s) 390, 616
EarI CTCTTC 2 cut(s) 390, 616
Ecl136II GAGCTC 1 cut(s) 1651
Eco130I CCWWGG 2 cut(s) 654, 1530
Eco24I GRGCYC 1 cut(s) 1653
Eco47I GGWCC 1 cut(s) 288
Eco53kI GAGCTC 1 cut(s) 1651
Eco57I CTGAAG 2 cut(s) 1136, 1715
Eco88I CYCGRG 1 cut(s) 1775
EcoICRI GAGCTC 1 cut(s) 1651
EcoRII CCWGG 3 cut(s) 552, 579, 686
EcoT14I CCWWGG 2 cut(s) 654, 1530
EcoT38I GRGCYC 1 cut(s) 1653
ErhI CCWWGG 2 cut(s) 654, 1530
FalI AAGNNNNNCTT 2 cut(s) 1430, 1462
FauNDI CATATG 1 cut(s) 1030
FbaI TGATCA 2 cut(s) 58, 1395
FblI GTMKAC 2 cut(s) 649, 1402
Fnu4HI GCNGC 7 cut(s) 12, 194, 209, 426, 527, 660, 1613
FokI GGATG 6 cut(s) 557, 842, 1062, 1214, 1280, 1513
FriOI GRGCYC 1 cut(s) 1653
Fsp4HI GCNGC 7 cut(s) 12, 194, 209, 426, 527, 660, 1613
FspBI CTAG 7 cut(s) 285, 438, 702, 1161, 1259, 1433, 1676
GluI GCNGC 7 cut(s) 12, 194, 209, 426, 527, 660, 1613
GsuI CTGGAG 2 cut(s) 1517, 1637
HaeIII GGCC 2 cut(s) 211, 1536
HinfI GANTC 7 cut(s) 331, 342, 613, 728, 937, 1210, 1661
HphI GGTGA 7 cut(s) 144, 386, 472, 643, 1281, 1462, 1513
Hpy166II GTNNAC 3 cut(s) 650, 1403, 1444
Hpy188I TCNGA 4 cut(s) 604, 825, 1153, 1648
Hpy188III TCNNGA 5 cut(s) 70, 928, 965, 1079, 1654
Hpy8I GTNNAC 3 cut(s) 650, 1403, 1444
Hpy99I CGWCG 1 cut(s) 1410
HpyAV CCTTC 5 cut(s) 151, 718, 755, 1061, 1111
HpyCH4III ACNGT 3 cut(s) 128, 319, 1809
HpyCH4IV ACGT 1 cut(s) 1321
HpyCH4V TGCA 9 cut(s) 4, 428, 500, 506, 804, 1139, 1483, 1612, 1763
HpyF10VI GCNNNNNNNGC 5 cut(s) 141, 146, 277, 497, 532
HpyF3I CTNAG 8 cut(s) 114, 225, 261, 869, 1150, 1384, 1631, 1647
HpySE526I ACGT 1 cut(s) 1321
Ksp22I TGATCA 2 cut(s) 58, 1395
LmnI GCTCC 3 cut(s) 510, 1039, 1656
Lsp1109I GCAGC 5 cut(s) 23, 180, 412, 671, 1624
LweI GCATC 6 cut(s) 153, 453, 493, 864, 1689, 1789
MaeI CTAG 7 cut(s) 285, 438, 702, 1161, 1259, 1433, 1676
MaeII ACGT 1 cut(s) 1321
MaeIII GTNAC 4 cut(s) 476, 631, 977, 1590
MflI RGATCY 4 cut(s) 1126, 1145, 1173, 1277
MhlI GDGCHC 2 cut(s) 515, 1653
MluCI AATT 9 cut(s) 78, 557, 775, 904, 915, 971, 1179, 1219, 1607
MlyI GAGTC 1 cut(s) 325
MmeI TCCRAC 2 cut(s) 627, 1573
MroXI GAANNNNTTC 1 cut(s) 561
MseI TTAA 6 cut(s) 215, 795, 843, 1095, 1215, 1571
MslI CAYNNNNRTG 3 cut(s) 179, 501, 1602
MspA1I CMGCKG 1 cut(s) 662
MspR9I CCNGG 3 cut(s) 554, 581, 688
Mva1269I GAATGC 1 cut(s) 537
MvaI CCWGG 3 cut(s) 554, 581, 688
MvnI CGCG 1 cut(s) 529
MwoI GCNNNNNNNGC 5 cut(s) 141, 146, 277, 497, 532
NcoI CCATGG 1 cut(s) 1530
NdeI CATATG 1 cut(s) 1030
NlaIV GGNNCC 4 cut(s) 297, 1147, 1175, 1715
NmeAIII GCCGAG 1 cut(s) 324
NmuCI GTSAC 1 cut(s) 631
NspI RCATGY 2 cut(s) 500, 1139
PaeI GCATGC 1 cut(s) 1139
PaeR7I CTCGAG 1 cut(s) 1775
PctI GAATGC 1 cut(s) 537
PdmI GAANNNNTTC 1 cut(s) 561
PfeI GAWTC 6 cut(s) 342, 613, 728, 937, 1210, 1661
PflMI CCANNNNNTGG 1 cut(s) 1241
PfoI TCCNGGA 1 cut(s) 686
PkrI GCNGC 7 cut(s) 13, 195, 210, 427, 528, 661, 1614
Ple19I CGATCG 1 cut(s) 102
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
PshBI ATTAAT 1 cut(s) 795
Psp124BI GAGCTC 1 cut(s) 1653
Psp1406I AACGTT 1 cut(s) 1321
Psp6I CCWGG 3 cut(s) 552, 579, 686
PspGI CCWGG 3 cut(s) 552, 579, 686
PspN4I GGNNCC 4 cut(s) 297, 1147, 1175, 1715
PspPI GGNCC 2 cut(s) 288, 1534
PspXI VCTCGAGB 1 cut(s) 1775
PsrI GAACNNNNNNTAC 2 cut(s) 1706, 1738
PsuI RGATCY 4 cut(s) 1126, 1145, 1173, 1277
PvuI CGATCG 1 cut(s) 102
RsaI GTAC 2 cut(s) 316, 321
RsaNI GTAC 2 cut(s) 315, 320
RseI CAYNNNNRTG 3 cut(s) 179, 501, 1602
SacI GAGCTC 1 cut(s) 1653
SaqAI TTAA 6 cut(s) 215, 795, 843, 1095, 1215, 1571
SatI GCNGC 7 cut(s) 12, 194, 209, 426, 527, 660, 1613
Sau96I GGNCC 2 cut(s) 288, 1534
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 3 cut(s) 554, 581, 688
SduI GDGCHC 2 cut(s) 515, 1653
SfaNI GCATC 6 cut(s) 153, 453, 493, 864, 1689, 1789
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 1 cut(s) 1775
SinI GGWCC 1 cut(s) 288
SlaI CTCGAG 1 cut(s) 1775
SmiMI CAYNNNNRTG 3 cut(s) 179, 501, 1602
SmlI CTYRAG 1 cut(s) 1775
SmoI CTYRAG 1 cut(s) 1775
SpeI ACTAGT 1 cut(s) 437
SphI GCATGC 1 cut(s) 1139
Sse9I AATT 9 cut(s) 78, 557, 775, 904, 915, 971, 1179, 1219, 1607
SsiI CCGC 4 cut(s) 208, 527, 642, 662
SspMI CTAG 7 cut(s) 285, 438, 702, 1161, 1259, 1433, 1676
SstI GAGCTC 1 cut(s) 1653
StyD4I CCNGG 3 cut(s) 552, 579, 686
StyI CCWWGG 2 cut(s) 654, 1530
TaaI ACNGT 3 cut(s) 128, 319, 1809
TaiI ACGT 1 cut(s) 1324
TaqI TCGA 5 cut(s) 102, 893, 1238, 1664, 1776
TaqII GACCGA 1 cut(s) 305
TasI AATT 9 cut(s) 78, 557, 775, 904, 915, 971, 1179, 1219, 1607
TatI WGTACW 2 cut(s) 314, 319
TauI GCSGC 2 cut(s) 211, 529
TfiI GAWTC 6 cut(s) 342, 613, 728, 937, 1210, 1661
Tru1I TTAA 6 cut(s) 215, 795, 843, 1095, 1215, 1571
Tru9I TTAA 6 cut(s) 215, 795, 843, 1095, 1215, 1571
TscAI CASTG 3 cut(s) 265, 1272, 1755
TseFI GTSAC 1 cut(s) 631
TseI GCWGC 5 cut(s) 11, 193, 425, 659, 1612
Tsp45I GTSAC 1 cut(s) 631
TspDTI ATGAA 7 cut(s) 197, 561, 710, 1043, 1331, 1520, 1784
TspRI CASTG 3 cut(s) 265, 1272, 1755
Van91I CCANNNNNTGG 1 cut(s) 1241
VpaK11BI GGWCC 1 cut(s) 288
VspI ATTAAT 1 cut(s) 795
XapI RAATTY 1 cut(s) 904
XceI RCATGY 2 cut(s) 500, 1139
XcmI CCANNNNNNNNNTGG 1 cut(s) 997
XhoI CTCGAG 1 cut(s) 1775
XmiI GTMKAC 2 cut(s) 649, 1402
XmnI GAANNNNTTC 1 cut(s) 561
XspI CTAG 7 cut(s) 285, 438, 702, 1161, 1259, 1433, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.