Rh1AG157700

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
29819880 .. 29822510
2631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG157700.1

Sequence Viewer

Length: 2631 bp
ATGGCGGAATCAATTTTAGCTGTGGTGGAAAAGCTCACAAACTTGCTAGCTGAAGAAACCCGTCTTCTGAAGGGGGTGAAGGACAAAGTGGAGACCCTCGTAAAGCAATTGAATCTGATCGAAGGTGTGGTGAAGGATGCAGATGCCAAGCAAGGTGGAAATGAAGCATACAACCGTTGGTTATCTCAAATACGAGATCTGGGCTACCAAGCTGTAGATGTAATTGAAACTTACCGCAATGACTCAGAATCCCCAGGTTTTTTTAGTTTGAAGGTATTCCGTCTTCACAATCTCAATGGGGAGGTTAATAAGATTCAATCTAGTCTTAAGGAGCTTTTTGAAGCGAAAGCCGGATTTGGCATTGCCCCAAACAATCCAGAGAGGGATGAAGCCAATGAAAGGCGGCTGCGATCATGGAGAGAACCACCAGCAATAATGAAGGAGGATGACTACATTGATCTTGTAGAAGACACAAAGGTGTTGATAGCACAACTATCTAGTATGGACCCGAGGTATGGTGTGGTGTCTATTGTCGGTATGGGTGGTTTGGGCAAAACCACTCTTGCAAATAAGTTGTACAGTCACACCAAGCTCAAATTTGATTGTAAAGTATTCATTTCTGTATCTAAAGATTACAGGAAAAAAGAGATCCTGTACGGAATCCTTGAAGGTATATGTGCTAAGAAAATTGACCGTTCAGAGAAGGAAGAGGAGAAGGATTTGATAATTAAGGTGCACGACTTGCTAAAAGAGAAGACTTATCTTGTGATACTAGATGATCTATGGGAAAAGGAGGATTGGGATAATTTGAAAGAAGCATTTCCGGGTGGAATGATGGGAAGCAAGGTGATGCTTACTACCCGAAACAGGGAGGTTGCCAAACATGCAGGGTGCATTAACCCCCATGAGCCACGATTGCTAACGGAAGATGAAAGCTTAGAATTGTTGCGCAAGAAAGCACTCCCACAACATGCTCAATTTCCTCTCGAGTTGGAAAAACTTGGAAGAGAGATGGTAGACAAATGTCGTGGTTTGCCGTTGGCAGTGGTGGTGCTTGGAGGATTAATGTCCGGGAAAAGCATGGAGGAATGGGAAATTTTGTCTAGAAATAGCAGGTGGAGCATCATGAATGATGTAGATCGTGTTTCTACAATTTTAGCCCTGAGTTACAATCATTTGCCCTTCCACTTGAAGTTATGTTTTCAACATTTGGGCCTTTTCCCAGAGGATTTTTGCATACCGAAAAATGAGTTGATACGCTTGTGGGTTGCTGAAAGATTCTTACCTCAACAAGGAGAAGACACAGAAGAAGGCGTCGCAGAAAAATGCATATATGAGTTGATAAATAGGTCCATGGTCCTGGTGGGAATGAGAACCTCTAGAGGGAGAGTTAAAGCCATCCGTATCCATGATGTTCTCAGAGACTTCTCTATCTCAAAGGCTAAGGAGGGCAATTTCCTTGAAATATACTCTGGGAAAGGAGTTGGATCAACATCCCGGTCATTCAAATCCCGAAGGCTTGCCGTCCATGGTACATACAATGACTATGCATTCCTAGAAAAGCACACCCCCCACTTACGATCCCTTCATTTTTTCAATAAAGTCGATCGGAAAATAGATTTTGTTTACAAGAATTCCAAGTTACTTAATGTCCTAGAAGTAACTGGCACTGAATATCATGGTAAGCAAGATTATAAGGCACTAGAGAACTTAACTCAGCTGAGGTATCTTGGATTTAGGGGAAGAACAGATATGCTCTACATGCCATCATCGATTGGAAAATTGATGAACTTACAGACATTAGATTTGAGACATTGTGTAATTACAAGTGCAATCCCTGATGTTCTTTGGAAGATAAGACGTTTGAGACATCTGCTTTTTAACTCCATGAGTGTATCAGGGAATTTAAAATTGGACAGCTTGACCCAATTACAGACCCTAAAAGGTGTAAGTAGTGGAAGATGGGCAAAGGGTTTAGTTAGGATGAGTTATATGCGACGACTGGGAATACGCTTACAATCAAGATCAAGTCCAGAAATGTTGATCATTTTCAACTCAGTGACTACACTGCGCAACCTTCAATCATTGTCGCTCAAGAAGCCATATGCGCCTCACGAAATTGCTGAACCCTTCCCTCCATTGGAGCAACTTTCTGGTTGTGTCAATCTTCATAAGCTTCATTTAATCGGGAAAATAAAGAAGCTACCTAGGGCAGACGAATTCCCGCCAAACCTCGAGAAGCTAGTTTTGGAGGACTCCATGCTGCAGAAAGATTCAATAGCTACTCTGGAGAAATTGCCAAAATTAAAGATGCTTGAGTTGGATGATGGATCATACGTGTCTAGTGAACTGGTTTGCTCTCCAGAAGGGTTTCCACAGCTAGAAGTTTTACACTTAAAATATTTATCTTTGAAGGAATGGACAGTTGAACAAGGGGCAATGATGAATCTCAAGCATCTGATGGTACATGATTGTAAGGAATTGAAACAGGTTTCAGAAGGATTCAAGTCATTGATTACTCTCCAAGACTTGGAGATTTCTAGGTCACCTGATTTTGAACACCTGGTTCGAACTGATCAAGACCTTGTGGAGTTCACAGAAAAGAATTTGATCAAATTTGTCCAGCGGTAA

Protein Analysis

876

Amino Acids

100.37

Weight (kDa)

8.68

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 7 - 83 3.1e-19 Rx N-terminal domain
NB-ARC PF00931 161 - 324 1.3e-41 NB-ARC domain
WHD_DRP PF23559 406 - 476 6.8e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 525 - 847 8.6e-38 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1695
AarI CACCTGC 1 cut(s) 1104
Acc16I TGCGCA 2 cut(s) 950, 2072
Acc36I ACCTGC 1 cut(s) 1104
AccB7I CCANNNNNTGG 1 cut(s) 2530
AccI GTMKAC 1 cut(s) 1017
AciI CCGC 5 cut(s) 5, 235, 403, 2225, 2626
AclWI GGATC 4 cut(s) 643, 1495, 1575, 2338
AcsI RAATTY 7 cut(s) 596, 1095, 1633, 1903, 2219, 2605, 2615
AcuI CTGAAG 2 cut(s) 72, 89
AcyI GRCGYC 1 cut(s) 1314
AfaI GTAC 4 cut(s) 578, 656, 1534, 2466
AfiI CCNNNNNNNGG 8 cut(s) 399, 515, 867, 868, 1292, 1383, 2140, 2530
AflII CTTAAG 1 cut(s) 326
AflIII ACRYGT 1 cut(s) 2337
AjnI CCWGG 3 cut(s) 253, 1359, 2562
AjuI GAANNNNNNNTTGG 4 cut(s) 1895, 1927, 2231, 2263
AleI CACNNNNGTG 1 cut(s) 476
Alw21I GWGCWC 1 cut(s) 738
Alw26I GTCTC 4 cut(s) 86, 1416, 1804, 1861
Alw44I GTGCAC 1 cut(s) 734
AlwI GGATC 4 cut(s) 643, 1495, 1575, 2338
Ama87I CYCGRG 3 cut(s) 508, 986, 2234
AoxI GGCC 1 cut(s) 1213
ApaLI GTGCAC 1 cut(s) 734
ApeKI GCWGC 2 cut(s) 406, 2263
ApoI RAATTY 7 cut(s) 596, 1095, 1633, 1903, 2219, 2605, 2615
ArsI GACNNNNNNTTYG 2 cut(s) 1789, 1821
AseI ATTAAT 1 cut(s) 1064
Asp700I GAANNNNTTC 3 cut(s) 275, 819, 2370
AspA2I CCTAGG 1 cut(s) 2207
AspLEI GCGC 3 cut(s) 951, 2073, 2110
AspS9I GGNCC 4 cut(s) 505, 1213, 1350, 1357
AsuC2I CCSGG 3 cut(s) 825, 1072, 1498
AsuHPI GGTGA 4 cut(s) 88, 142, 859, 2538
AsuII TTCGAA 1 cut(s) 2569
AsuNHI GCTAGC 1 cut(s) 46
AvaI CYCGRG 3 cut(s) 508, 986, 2234
AvaII GGWCC 3 cut(s) 505, 1350, 1357
AvrII CCTAGG 1 cut(s) 2207
BaeGI GKGCMC 1 cut(s) 738
BaeI ACNNNNGTAYC 2 cut(s) 1247, 1280
BarI GAAGNNNNNNTAC 2 cut(s) 267, 299
BbsI GAAGAC 5 cut(s) 56, 275, 474, 761, 1305
Bbv12I GWGCWC 1 cut(s) 738
BbvCI CCTCAGC 1 cut(s) 1721
BbvI GCAGC 2 cut(s) 393, 2250
BccI CCATC 7 cut(s) 829, 1006, 1406, 1774, 1956, 2321, 2455
BceAI ACGGC 2 cut(s) 1021, 1508
BciT130I CCWGG 3 cut(s) 255, 1361, 2564
BciVI GTATCC 1 cut(s) 1415
BclI TGATCA 3 cut(s) 2043, 2575, 2610
BcnI CCSGG 3 cut(s) 825, 1072, 1498
BcoDI GTCTC 4 cut(s) 86, 1416, 1804, 1861
BfmI CTRYAG 2 cut(s) 213, 2264
BfrI CTTAAG 1 cut(s) 326
BfuAI ACCTGC 1 cut(s) 1104
BfuI GTATCC 1 cut(s) 1415
BglII AGATCT 1 cut(s) 196
BisI GCNGC 3 cut(s) 404, 407, 2264
BlnI CCTAGG 1 cut(s) 2207
BlsI GCNGC 3 cut(s) 405, 408, 2265
Bme1390I CCNGG 6 cut(s) 255, 825, 1072, 1361, 1498, 2564
Bme18I GGWCC 3 cut(s) 505, 1350, 1357
BmeT110I CYCGRG 3 cut(s) 508, 986, 2234
BmgT120I GGNCC 4 cut(s) 505, 1213, 1350, 1357
BmiI GGNNCC 1 cut(s) 507
BmrFI CCNGG 6 cut(s) 255, 825, 1072, 1361, 1498, 2564
BmrI ACTGGG 1 cut(s) 2012
BmsI GCATC 6 cut(s) 127, 133, 840, 1131, 2301, 2464
BmtI GCTAGC 1 cut(s) 50
BmuI ACTGGG 1 cut(s) 2012
BoxI GACNNNNGTC 1 cut(s) 1023
BpiI GAAGAC 5 cut(s) 56, 275, 474, 761, 1305
BpmI CTGGAG 2 cut(s) 2309, 2346
Bpu10I CCTNAGC 2 cut(s) 1443, 1721
Bpu14I TTCGAA 1 cut(s) 2569
BpuEI CTTGAG 3 cut(s) 2078, 2336, 2435
BpuMI CCSGG 3 cut(s) 825, 1072, 1498
Bsa29I ATCGAT 1 cut(s) 1772
BsaAI YACGTR 1 cut(s) 2338
BsaBI GATNNNNATC 2 cut(s) 1137, 1492
BsaHI GRCGYC 1 cut(s) 1314
BsaI GGTCTC 1 cut(s) 86
BsaJI CCNNGG 5 cut(s) 253, 509, 1353, 1528, 2207
Bsc4I CCNNNNNNNGG 8 cut(s) 399, 515, 867, 868, 1292, 1383, 2140, 2530
Bse1I ACTGG 3 cut(s) 1669, 2007, 2355
Bse3DI GCAATG 3 cut(s) 244, 360, 2445
Bse8I GATNNNNATC 2 cut(s) 1137, 1492
BseBI CCWGG 3 cut(s) 255, 1361, 2564
BseCI ATCGAT 1 cut(s) 1772
BseDI CCNNGG 5 cut(s) 253, 509, 1353, 1528, 2207
BseGI GGATG 7 cut(s) 142, 391, 451, 1398, 1493, 1989, 2329
BseJI GATNNNNATC 2 cut(s) 1137, 1492
BseLI CCNNNNNNNGG 8 cut(s) 399, 515, 867, 868, 1292, 1383, 2140, 2530
BseMI GCAATG 3 cut(s) 244, 360, 2445
BseMII CTCAG 6 cut(s) 258, 1154, 1432, 1712, 1730, 2070
BseNI ACTGG 3 cut(s) 1669, 2007, 2355
BseRI GAGGAG 1 cut(s) 725
BseSI GKGCMC 1 cut(s) 738
BseXI GCAGC 2 cut(s) 393, 2250
Bsh1285I CGRYCG 1 cut(s) 1609
BshFI GGCC 1 cut(s) 1215
BshVI ATCGAT 1 cut(s) 1772
BsiEI CGRYCG 1 cut(s) 1609
BsiHKAI GWGCWC 1 cut(s) 738
BsiHKCI CYCGRG 3 cut(s) 508, 986, 2234
BsiSI CCGG 4 cut(s) 351, 824, 1071, 1498
BslI CCNNNNNNNGG 8 cut(s) 399, 515, 867, 868, 1292, 1383, 2140, 2530
BsmAI GTCTC 4 cut(s) 86, 1416, 1804, 1861
BsmI GAATGC 1 cut(s) 1550
BsnI GGCC 1 cut(s) 1215
Bso31I GGTCTC 1 cut(s) 86
BsoBI CYCGRG 3 cut(s) 508, 986, 2234
Bsp119I TTCGAA 1 cut(s) 2569
Bsp1286I GDGCHC 1 cut(s) 738
Bsp1407I TGTACA 1 cut(s) 576
Bsp19I CCATGG 2 cut(s) 1353, 1528
BspACI CCGC 5 cut(s) 5, 235, 403, 2225, 2626
BspANI GGCC 1 cut(s) 1215
BspCNI CTCAG 6 cut(s) 257, 1155, 1431, 1713, 1729, 2069
BspDI ATCGAT 1 cut(s) 1772
BspHI TCATGA 1 cut(s) 1125
BspLI GGNNCC 1 cut(s) 507
BspMAI CTGCAG 1 cut(s) 2268
BspMI ACCTGC 1 cut(s) 1104
BspOI GCTAGC 1 cut(s) 50
BspPI GGATC 4 cut(s) 643, 1495, 1575, 2338
BspT104I TTCGAA 1 cut(s) 2569
BspTI CTTAAG 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 86
BsrDI GCAATG 3 cut(s) 244, 360, 2445
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 3 cut(s) 1669, 2007, 2355
BssECI CCNNGG 5 cut(s) 253, 509, 1353, 1528, 2207
BssNI GRCGYC 1 cut(s) 1314
BssT1I CCWWGG 3 cut(s) 1353, 1528, 2207
Bst2UI CCWGG 3 cut(s) 255, 1361, 2564
Bst4CI ACNGT 4 cut(s) 176, 581, 695, 2425
Bst6I CTCTTC 2 cut(s) 702, 1000
BstACI GRCGYC 1 cut(s) 1314
BstAFI CTTAAG 1 cut(s) 326
BstAPI GCANNNNNTGC 1 cut(s) 742
BstAUI TGTACA 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 2338
BstBI TTCGAA 1 cut(s) 2569
BstC8I GCNNGC 2 cut(s) 48, 1521
BstDEI CTNAG 9 cut(s) 244, 681, 937, 1163, 1418, 1443, 1716, 1721, 2056
BstDSI CCRYGG 2 cut(s) 1353, 1528
BstEII GGTNACC 1 cut(s) 2544
BstENI CCTNNNNNAGG 1 cut(s) 1290
BstF5I GGATG 7 cut(s) 142, 391, 451, 1398, 1493, 1989, 2329
BstHHI GCGC 3 cut(s) 951, 2073, 2110
BstMAI GTCTC 4 cut(s) 86, 1416, 1804, 1861
BstMCI CGRYCG 1 cut(s) 1609
BstMWI GCNNNNNNNGC 7 cut(s) 742, 884, 916, 1119, 1762, 2098, 2107
BstNI CCWGG 3 cut(s) 255, 1361, 2564
BstNSI RCATGY 3 cut(s) 887, 974, 1765
BstPAI GACNNNNGTC 1 cut(s) 1023
BstPI GGTNACC 1 cut(s) 2544
BstSCI CCNGG 6 cut(s) 253, 823, 1070, 1359, 1496, 2562
BstSFI CTRYAG 2 cut(s) 213, 2264
BstSLI GKGCMC 1 cut(s) 738
BstV1I GCAGC 2 cut(s) 393, 2250
BstV2I GAAGAC 5 cut(s) 56, 275, 474, 761, 1305
BstX2I RGATCY 2 cut(s) 196, 648
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstYI RGATCY 2 cut(s) 196, 648
Bsu15I ATCGAT 1 cut(s) 1772
BsuI GTATCC 1 cut(s) 1415
BsuRI GGCC 1 cut(s) 1215
BsuTUI ATCGAT 1 cut(s) 1772
BtgI CCRYGG 2 cut(s) 1353, 1528
BtsCI GGATG 7 cut(s) 142, 391, 451, 1398, 1493, 1989, 2329
BtsI GCAGTG 2 cut(s) 1050, 2066
BtsIMutI CAGTG 4 cut(s) 1050, 1668, 2064, 2066
BveI ACCTGC 1 cut(s) 1104
Cac8I GCNNGC 2 cut(s) 48, 1521
CciI TCATGA 1 cut(s) 1125
CfoI GCGC 3 cut(s) 951, 2073, 2110
Cfr13I GGNCC 4 cut(s) 505, 1213, 1350, 1357
ClaI ATCGAT 1 cut(s) 1772
CseI GACGC 1 cut(s) 1303
CsiI ACCWGGT 1 cut(s) 2562
Csp6I GTAC 4 cut(s) 577, 655, 1533, 2465
CspCI CAANNNNNGTGG 4 cut(s) 136, 171, 1009, 1044
CviQI GTAC 4 cut(s) 577, 655, 1533, 2465
DdeI CTNAG 9 cut(s) 244, 681, 937, 1163, 1418, 1443, 1716, 1721, 2056
DraI TTTAAA 1 cut(s) 1908
Eam1104I CTCTTC 2 cut(s) 702, 1000
EarI CTCTTC 2 cut(s) 702, 1000
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 1353, 1528, 2207
Eco31I GGTCTC 1 cut(s) 86
Eco47I GGWCC 3 cut(s) 505, 1350, 1357
Eco57I CTGAAG 2 cut(s) 72, 89
Eco88I CYCGRG 3 cut(s) 508, 986, 2234
Eco91I GGTNACC 1 cut(s) 2544
EcoNI CCTNNNNNAGG 1 cut(s) 1290
EcoO65I GGTNACC 1 cut(s) 2544
EcoRI GAATTC 2 cut(s) 1633, 2219
EcoRII CCWGG 3 cut(s) 253, 1359, 2562
EcoT14I CCWWGG 3 cut(s) 1353, 1528, 2207
EcoT22I ATGCAT 2 cut(s) 1331, 1552
ErhI CCWWGG 3 cut(s) 1353, 1528, 2207
FauI CCCGC 1 cut(s) 2232
FauNDI CATATG 1 cut(s) 2104
FbaI TGATCA 3 cut(s) 2043, 2575, 2610
FblI GTMKAC 1 cut(s) 1017
Fnu4HI GCNGC 3 cut(s) 404, 407, 2264
FokI GGATG 7 cut(s) 149, 398, 458, 1385, 1480, 1996, 2336
Fsp4HI GCNGC 3 cut(s) 404, 407, 2264
FspI TGCGCA 2 cut(s) 950, 2072
GlaI GCGC 3 cut(s) 950, 2072, 2109
GluI GCNGC 3 cut(s) 404, 407, 2264
GsuI CTGGAG 2 cut(s) 2309, 2346
HaeIII GGCC 1 cut(s) 1215
HapII CCGG 4 cut(s) 351, 824, 1071, 1498
HgaI GACGC 1 cut(s) 1303
HhaI GCGC 3 cut(s) 951, 2073, 2110
Hin1I GRCGYC 1 cut(s) 1314
Hin6I GCGC 3 cut(s) 949, 2071, 2108
HinP1I GCGC 3 cut(s) 949, 2071, 2108
HindIII AAGCTT 2 cut(s) 934, 2174
HpaII CCGG 4 cut(s) 351, 824, 1071, 1498
HphI GGTGA 4 cut(s) 88, 142, 859, 2538
Hpy166II GTNNAC 5 cut(s) 736, 1018, 1627, 2348, 2595
Hpy188I TCNGA 8 cut(s) 69, 117, 247, 700, 1421, 1611, 2460, 2497
Hpy8I GTNNAC 5 cut(s) 736, 1018, 1627, 2348, 2595
Hpy99I CGWCG 2 cut(s) 1319, 2001
HpyCH4III ACNGT 4 cut(s) 176, 581, 695, 2425
HpyCH4IV ACGT 2 cut(s) 1861, 2337
HpyF10VI GCNNNNNNNGC 7 cut(s) 742, 884, 916, 1119, 1762, 2098, 2107
HpyF3I CTNAG 9 cut(s) 244, 681, 937, 1163, 1418, 1443, 1716, 1721, 2056
HpySE526I ACGT 2 cut(s) 1861, 2337
Hsp92I GRCGYC 1 cut(s) 1314
HspAI GCGC 3 cut(s) 949, 2071, 2108
Ksp22I TGATCA 3 cut(s) 2043, 2575, 2610
LmnI GCTCC 3 cut(s) 331, 1119, 2143
Lsp1109I GCAGC 2 cut(s) 393, 2250
LweI GCATC 6 cut(s) 127, 133, 840, 1131, 2301, 2464
MabI ACCWGGT 1 cut(s) 2562
MaeII ACGT 2 cut(s) 1861, 2337
MaeIII GTNAC 6 cut(s) 581, 1166, 1641, 1660, 2059, 2544
MfeI CAATTG 1 cut(s) 107
MflI RGATCY 2 cut(s) 196, 648
MhlI GDGCHC 1 cut(s) 738
MlyI GAGTC 2 cut(s) 236, 2249
MmeI TCCRAC 3 cut(s) 972, 1465, 2301
Mph1103I ATGCAT 2 cut(s) 1331, 1552
MroXI GAANNNNTTC 3 cut(s) 275, 819, 2370
MslI CAYNNNNRTG 1 cut(s) 476
MspA1I CMGCKG 2 cut(s) 1720, 2626
MspCI CTTAAG 1 cut(s) 326
MspI CCGG 4 cut(s) 351, 824, 1071, 1498
MspR9I CCNGG 6 cut(s) 255, 825, 1072, 1361, 1498, 2564
MunI CAATTG 1 cut(s) 107
Mva1269I GAATGC 1 cut(s) 1550
MvaI CCWGG 3 cut(s) 255, 1361, 2564
MwoI GCNNNNNNNGC 7 cut(s) 742, 884, 916, 1119, 1762, 2098, 2107
NciI CCSGG 3 cut(s) 825, 1072, 1498
NcoI CCATGG 2 cut(s) 1353, 1528
NdeI CATATG 1 cut(s) 2104
NheI GCTAGC 1 cut(s) 46
NlaIV GGNNCC 1 cut(s) 507
NmuCI GTSAC 3 cut(s) 581, 2059, 2544
NsbI TGCGCA 2 cut(s) 950, 2072
NsiI ATGCAT 2 cut(s) 1331, 1552
NspI RCATGY 3 cut(s) 887, 974, 1765
NspV TTCGAA 1 cut(s) 2569
OliI CACNNNNGTG 1 cut(s) 476
PaeR7I CTCGAG 2 cut(s) 986, 2234
PagI TCATGA 1 cut(s) 1125
PaqCI CACCTGC 1 cut(s) 1104
PctI GAATGC 1 cut(s) 1550
PdmI GAANNNNTTC 3 cut(s) 275, 819, 2370
PfeI GAWTC 9 cut(s) 8, 112, 248, 313, 660, 1278, 2273, 2446, 2502
PflMI CCANNNNNTGG 1 cut(s) 2530
PfoI TCCNGGA 1 cut(s) 1070
PkrI GCNGC 3 cut(s) 405, 408, 2265
Ple19I CGATCG 1 cut(s) 1609
PleI GAGTC 2 cut(s) 236, 2249
PpsI GAGTC 2 cut(s) 236, 2249
Ppu21I YACGTR 1 cut(s) 2338
PshAI GACNNNNGTC 1 cut(s) 1023
PshBI ATTAAT 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 1695
Psp6I CCWGG 3 cut(s) 253, 1359, 2562
PspEI GGTNACC 1 cut(s) 2544
PspGI CCWGG 3 cut(s) 253, 1359, 2562
PspN4I GGNNCC 1 cut(s) 507
PspPI GGNCC 4 cut(s) 505, 1213, 1350, 1357
PstI CTGCAG 1 cut(s) 2268
PsuI RGATCY 2 cut(s) 196, 648
PvuI CGATCG 1 cut(s) 1609
PvuII CAGCTG 1 cut(s) 1720
RsaI GTAC 4 cut(s) 578, 656, 1534, 2466
RsaNI GTAC 4 cut(s) 577, 655, 1533, 2465
RseI CAYNNNNRTG 1 cut(s) 476
SatI GCNGC 3 cut(s) 404, 407, 2264
Sau96I GGNCC 4 cut(s) 505, 1213, 1350, 1357
SchI GAGTC 2 cut(s) 236, 2249
ScrFI CCNGG 6 cut(s) 255, 825, 1072, 1361, 1498, 2564
SduI GDGCHC 1 cut(s) 738
SexAI ACCWGGT 1 cut(s) 2562
SfaNI GCATC 6 cut(s) 127, 133, 840, 1131, 2301, 2464
SfcI CTRYAG 2 cut(s) 213, 2264
Sfr274I CTCGAG 2 cut(s) 986, 2234
SfuI TTCGAA 1 cut(s) 2569
SinI GGWCC 3 cut(s) 505, 1350, 1357
SlaI CTCGAG 2 cut(s) 986, 2234
SmiMI CAYNNNNRTG 1 cut(s) 476
SmlI CTYRAG 6 cut(s) 326, 986, 2093, 2234, 2315, 2450
SmoI CTYRAG 6 cut(s) 326, 986, 2093, 2234, 2315, 2450
SsiI CCGC 5 cut(s) 5, 235, 403, 2225, 2626
SspI AATATT 1 cut(s) 2402
StyD4I CCNGG 6 cut(s) 253, 823, 1070, 1359, 1496, 2562
StyI CCWWGG 3 cut(s) 1353, 1528, 2207
TaaI ACNGT 4 cut(s) 176, 581, 695, 2425
TaiI ACGT 2 cut(s) 1864, 2340
TaqI TCGA 6 cut(s) 120, 987, 1605, 1772, 2235, 2569
TatI WGTACW 1 cut(s) 576
TauI GCSGC 1 cut(s) 406
TfiI GAWTC 9 cut(s) 8, 112, 248, 313, 660, 1278, 2273, 2446, 2502
TscAI CASTG 4 cut(s) 1050, 1675, 2064, 2073
TseFI GTSAC 3 cut(s) 581, 2059, 2544
TseI GCWGC 2 cut(s) 406, 2263
Tsp45I GTSAC 3 cut(s) 581, 2059, 2544
TspGWI ACGGA 4 cut(s) 269, 672, 938, 1391
TspRI CASTG 4 cut(s) 1050, 1675, 2064, 2073
Van91I CCANNNNNTGG 1 cut(s) 2530
Vha464I CTTAAG 1 cut(s) 326
VneI GTGCAC 1 cut(s) 734
VpaK11BI GGWCC 3 cut(s) 505, 1350, 1357
VspI ATTAAT 1 cut(s) 1064
XagI CCTNNNNNAGG 1 cut(s) 1290
XapI RAATTY 7 cut(s) 596, 1095, 1633, 1903, 2219, 2605, 2615
XbaI TCTAGA 2 cut(s) 1103, 1379
XceI RCATGY 3 cut(s) 887, 974, 1765
XcmI CCANNNNNNNNNTGG 1 cut(s) 1360
XhoI CTCGAG 2 cut(s) 986, 2234
XmaJI CCTAGG 1 cut(s) 2207
XmiI GTMKAC 1 cut(s) 1017
XmnI GAANNNNTTC 3 cut(s) 275, 819, 2370
Zsp2I ATGCAT 2 cut(s) 1331, 1552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.