Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 5 - 91 | 1.4e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 165 - 332 | 2.7e-42 | NB-ARC domain |
| AAA_22 | PF13401 | 178 - 270 | 2.4e-06 | AAA domain |
| WHD_DRP | PF23559 | 419 - 489 | 4e-19 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 539 - 851 | 1.4e-23 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 184 |
| Acc36I | ACCTGC | 1 cut(s) | 2494 |
| Acc65I | GGTACC | 1 cut(s) | 1943 |
| AccB1I | GGYRCC | 1 cut(s) | 1943 |
| AccI | GTMKAC | 1 cut(s) | 1066 |
| AccII | CGCG | 2 cut(s) | 1137, 1411 |
| AciI | CCGC | 6 cut(s) | 430, 1059, 1188, 1310, 1983, 2390 |
| AclWI | GGATC | 8 cut(s) | 316, 630, 914, 1390, 1715, 1945, 2265, 2353 |
| AcoI | YGGCCR | 1 cut(s) | 2007 |
| AcsI | RAATTY | 5 cut(s) | 360, 1492, 1675, 2606, 2630 |
| AcuI | CTGAAG | 6 cut(s) | 237, 299, 2054, 2168, 2477, 2522 |
| AfaI | GTAC | 2 cut(s) | 599, 1945 |
| AfeI | AGCGCT | 1 cut(s) | 405 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 614, 1003, 1331, 1730, 2159 |
| AflIII | ACRYGT | 1 cut(s) | 1783 |
| AjnI | CCWGG | 5 cut(s) | 135, 324, 329, 1398, 2239 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1482, 1514, 2416, 2448 |
| AleI | CACNNNNGTG | 1 cut(s) | 514 |
| Alw21I | GWGCWC | 3 cut(s) | 521, 932, 1174 |
| Alw26I | GTCTC | 5 cut(s) | 99, 433, 1189, 1743, 1891 |
| Alw44I | GTGCAC | 1 cut(s) | 517 |
| AlwI | GGATC | 8 cut(s) | 316, 630, 914, 1390, 1715, 1945, 2265, 2353 |
| Aor51HI | AGCGCT | 1 cut(s) | 405 |
| AoxI | GGCC | 2 cut(s) | 327, 2007 |
| ApaLI | GTGCAC | 1 cut(s) | 517 |
| ApeKI | GCWGC | 5 cut(s) | 248, 251, 763, 845, 2470 |
| ApoI | RAATTY | 5 cut(s) | 360, 1492, 1675, 2606, 2630 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 63, 1494, 2145, 2385 |
| Asp718I | GGTACC | 1 cut(s) | 1943 |
| AspLEI | GCGC | 3 cut(s) | 406, 1137, 2097 |
| AspS9I | GGNCC | 1 cut(s) | 1030 |
| AsuC2I | CCSGG | 1 cut(s) | 998 |
| AsuHPI | GGTGA | 6 cut(s) | 410, 441, 877, 889, 1060, 2553 |
| AsuII | TTCGAA | 1 cut(s) | 2584 |
| AsuNHI | GCTAGC | 1 cut(s) | 374 |
| AvaII | GGWCC | 1 cut(s) | 1030 |
| BaeGI | GKGCMC | 2 cut(s) | 521, 2455 |
| BalI | TGGCCA | 1 cut(s) | 2009 |
| BanI | GGYRCC | 1 cut(s) | 1943 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1305, 1337 |
| BauI | CACGAG | 2 cut(s) | 1523, 2052 |
| BbsI | GAAGAC | 7 cut(s) | 495, 830, 966, 1121, 2015, 2601, 2661 |
| Bbv12I | GWGCWC | 3 cut(s) | 521, 932, 1174 |
| BbvCI | CCTCAGC | 1 cut(s) | 1688 |
| BbvI | GCAGC | 5 cut(s) | 260, 263, 750, 832, 2482 |
| BceAI | ACGGC | 1 cut(s) | 134 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1277, 1311 |
| BciT130I | CCWGG | 5 cut(s) | 137, 326, 331, 1400, 2241 |
| BciVI | GTATCC | 2 cut(s) | 661, 1803 |
| BclI | TGATCA | 2 cut(s) | 1164, 1648 |
| BcnI | CCSGG | 1 cut(s) | 998 |
| BcoDI | GTCTC | 5 cut(s) | 99, 433, 1189, 1743, 1891 |
| BfaI | CTAG | 7 cut(s) | 375, 584, 737, 855, 1601, 2258, 2303 |
| BfmI | CTRYAG | 4 cut(s) | 540, 680, 1275, 1726 |
| BfoI | RGCGCY | 1 cut(s) | 407 |
| BfuAI | ACCTGC | 1 cut(s) | 2494 |
| BfuI | GTATCC | 2 cut(s) | 661, 1803 |
| BisI | GCNGC | 5 cut(s) | 249, 252, 764, 846, 2471 |
| BlsI | GCNGC | 5 cut(s) | 250, 253, 765, 847, 2472 |
| Bme1390I | CCNGG | 6 cut(s) | 137, 326, 331, 998, 1400, 2241 |
| Bme18I | GGWCC | 1 cut(s) | 1030 |
| BmgT120I | GGNCC | 1 cut(s) | 1030 |
| BmiI | GGNNCC | 3 cut(s) | 620, 1945, 2508 |
| BmrFI | CCNGG | 6 cut(s) | 137, 326, 331, 998, 1400, 2241 |
| BmtI | GCTAGC | 1 cut(s) | 378 |
| BoxI | GACNNNNGTC | 1 cut(s) | 26 |
| BpiI | GAAGAC | 7 cut(s) | 495, 830, 966, 1121, 2015, 2601, 2661 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 329, 361 |
| BpmI | CTGGAG | 1 cut(s) | 119 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1202, 1688, 2465 |
| Bpu14I | TTCGAA | 1 cut(s) | 2584 |
| BpuEI | CTTGAG | 3 cut(s) | 968, 1158, 2177 |
| BpuMI | CCSGG | 1 cut(s) | 998 |
| BsaAI | YACGTR | 1 cut(s) | 1786 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1719 |
| BsaJI | CCNNGG | 7 cut(s) | 495, 923, 944, 1033, 2239, 2334, 2376 |
| BsaWI | WCCGGW | 1 cut(s) | 2563 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1611, 1641 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 614, 1003, 1331, 1730, 2159 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1719 |
| BseBI | CCWGG | 5 cut(s) | 137, 326, 331, 1400, 2241 |
| BseDI | CCNNGG | 7 cut(s) | 495, 923, 944, 1033, 2239, 2334, 2376 |
| BseJI | GATNNNNATC | 1 cut(s) | 1719 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 614, 1003, 1331, 1730, 2159 |
| BseMII | CTCAG | 6 cut(s) | 104, 115, 1471, 1679, 1886, 2479 |
| BseRI | GAGGAG | 3 cut(s) | 544, 758, 2365 |
| BseSI | GKGCMC | 2 cut(s) | 521, 2455 |
| BseXI | GCAGC | 5 cut(s) | 260, 263, 750, 832, 2482 |
| BsgI | GTGCAG | 1 cut(s) | 2390 |
| Bsh1236I | CGCG | 2 cut(s) | 1137, 1411 |
| BshFI | GGCC | 2 cut(s) | 329, 2009 |
| BshNI | GGYRCC | 1 cut(s) | 1943 |
| BsiHKAI | GWGCWC | 3 cut(s) | 521, 932, 1174 |
| BsiSI | CCGG | 2 cut(s) | 998, 2564 |
| BslFI | GGGAC | 1 cut(s) | 2175 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 614, 1003, 1331, 1730, 2159 |
| BsmAI | GTCTC | 5 cut(s) | 99, 433, 1189, 1743, 1891 |
| BsmFI | GGGAC | 1 cut(s) | 2175 |
| BsmI | GAATGC | 1 cut(s) | 206 |
| BsnI | GGCC | 2 cut(s) | 329, 2009 |
| Bsp119I | TTCGAA | 1 cut(s) | 2584 |
| Bsp1286I | GDGCHC | 4 cut(s) | 521, 932, 1174, 2455 |
| Bsp1407I | TGTACA | 1 cut(s) | 597 |
| BspACI | CCGC | 6 cut(s) | 430, 1059, 1188, 1310, 1983, 2390 |
| BspANI | GGCC | 2 cut(s) | 329, 2009 |
| BspCNI | CTCAG | 6 cut(s) | 105, 114, 1470, 1680, 1887, 2478 |
| BspFNI | CGCG | 2 cut(s) | 1137, 1411 |
| BspLI | GGNNCC | 3 cut(s) | 620, 1945, 2508 |
| BspMI | ACCTGC | 1 cut(s) | 2494 |
| BspOI | GCTAGC | 1 cut(s) | 378 |
| BspPI | GGATC | 8 cut(s) | 316, 630, 914, 1390, 1715, 1945, 2265, 2353 |
| BspT104I | TTCGAA | 1 cut(s) | 2584 |
| BspT107I | GGYRCC | 1 cut(s) | 1943 |
| BsrGI | TGTACA | 1 cut(s) | 597 |
| BssECI | CCNNGG | 7 cut(s) | 495, 923, 944, 1033, 2239, 2334, 2376 |
| BssSI | CACGAG | 2 cut(s) | 1523, 2052 |
| BssT1I | CCWWGG | 3 cut(s) | 923, 1033, 2334 |
| Bst2BI | CACGAG | 2 cut(s) | 1523, 2052 |
| Bst2UI | CCWGG | 5 cut(s) | 137, 326, 331, 1400, 2241 |
| Bst4CI | ACNGT | 4 cut(s) | 516, 1123, 1302, 2486 |
| Bst6I | CTCTTC | 3 cut(s) | 735, 1033, 2541 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 212, 2404 |
| BstAUI | TGTACA | 1 cut(s) | 597 |
| BstBAI | YACGTR | 1 cut(s) | 1786 |
| BstBI | TTCGAA | 1 cut(s) | 2584 |
| BstC8I | GCNNGC | 3 cut(s) | 376, 1139, 1566 |
| BstDSI | CCRYGG | 1 cut(s) | 944 |
| BstEII | GGTNACC | 1 cut(s) | 883 |
| BstFNI | CGCG | 2 cut(s) | 1137, 1411 |
| BstH2I | RGCGCY | 1 cut(s) | 407 |
| BstHHI | GCGC | 3 cut(s) | 406, 1137, 2097 |
| BstMAI | GTCTC | 5 cut(s) | 99, 433, 1189, 1743, 1891 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 212, 221, 375, 914, 1196, 2404, 2470 |
| BstNI | CCWGG | 5 cut(s) | 137, 326, 331, 1400, 2241 |
| BstNSI | RCATGY | 1 cut(s) | 2581 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 26 |
| BstPI | GGTNACC | 1 cut(s) | 883 |
| BstSCI | CCNGG | 6 cut(s) | 135, 324, 329, 996, 1398, 2239 |
| BstSFI | CTRYAG | 4 cut(s) | 540, 680, 1275, 1726 |
| BstSLI | GKGCMC | 2 cut(s) | 521, 2455 |
| BstUI | CGCG | 2 cut(s) | 1137, 1411 |
| BstV1I | GCAGC | 5 cut(s) | 260, 263, 750, 832, 2482 |
| BstV2I | GAAGAC | 7 cut(s) | 495, 830, 966, 1121, 2015, 2601, 2661 |
| BstX2I | RGATCY | 5 cut(s) | 321, 635, 1720, 2270, 2345 |
| BstYI | RGATCY | 5 cut(s) | 321, 635, 1720, 2270, 2345 |
| BsuI | GTATCC | 2 cut(s) | 661, 1803 |
| BsuRI | GGCC | 2 cut(s) | 329, 2009 |
| BtgI | CCRYGG | 1 cut(s) | 944 |
| BtsI | GCAGTG | 1 cut(s) | 1432 |
| BtsIMutI | CAGTG | 4 cut(s) | 1128, 1174, 1432, 2453 |
| BveI | ACCTGC | 1 cut(s) | 2494 |
| Cac8I | GCNNGC | 3 cut(s) | 376, 1139, 1566 |
| CfoI | GCGC | 3 cut(s) | 406, 1137, 2097 |
| Cfr13I | GGNCC | 1 cut(s) | 1030 |
| Csp6I | GTAC | 2 cut(s) | 598, 1944 |
| CviAII | CATG | 9 cut(s) | 264, 379, 559, 938, 1236, 1393, 1448, 1948, 2578 |
| CviQI | GTAC | 2 cut(s) | 598, 1944 |
| DraI | TTTAAA | 1 cut(s) | 1230 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 184 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 184 |
| EaeI | YGGCCR | 1 cut(s) | 2007 |
| Eam1104I | CTCTTC | 3 cut(s) | 735, 1033, 2541 |
| EarI | CTCTTC | 3 cut(s) | 735, 1033, 2541 |
| EciI | GGCGGA | 1 cut(s) | 1998 |
| Eco130I | CCWWGG | 3 cut(s) | 923, 1033, 2334 |
| Eco47I | GGWCC | 1 cut(s) | 1030 |
| Eco47III | AGCGCT | 1 cut(s) | 405 |
| Eco57I | CTGAAG | 6 cut(s) | 237, 299, 2054, 2168, 2477, 2522 |
| Eco91I | GGTNACC | 1 cut(s) | 883 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1030 |
| EcoO65I | GGTNACC | 1 cut(s) | 883 |
| EcoRI | GAATTC | 1 cut(s) | 2606 |
| EcoRII | CCWGG | 5 cut(s) | 135, 324, 329, 1398, 2239 |
| EcoT14I | CCWWGG | 3 cut(s) | 923, 1033, 2334 |
| EcoT22I | ATGCAT | 1 cut(s) | 1290 |
| ErhI | CCWWGG | 3 cut(s) | 923, 1033, 2334 |
| FaeI | CATG | 9 cut(s) | 267, 382, 562, 941, 1239, 1396, 1451, 1951, 2581 |
| FaqI | GGGAC | 1 cut(s) | 2175 |
| FatI | CATG | 9 cut(s) | 263, 378, 558, 937, 1235, 1392, 1447, 1947, 2577 |
| FauNDI | CATATG | 1 cut(s) | 768 |
| FbaI | TGATCA | 2 cut(s) | 1164, 1648 |
| FblI | GTMKAC | 1 cut(s) | 1066 |
| Fnu4HI | GCNGC | 5 cut(s) | 249, 252, 764, 846, 2471 |
| Fsp4HI | GCNGC | 5 cut(s) | 249, 252, 764, 846, 2471 |
| FspBI | CTAG | 7 cut(s) | 375, 584, 737, 855, 1601, 2258, 2303 |
| GlaI | GCGC | 3 cut(s) | 405, 1136, 2096 |
| GluI | GCNGC | 5 cut(s) | 249, 252, 764, 846, 2471 |
| GsuI | CTGGAG | 1 cut(s) | 119 |
| HaeII | RGCGCY | 1 cut(s) | 407 |
| HaeIII | GGCC | 2 cut(s) | 329, 2009 |
| HapII | CCGG | 2 cut(s) | 998, 2564 |
| HhaI | GCGC | 3 cut(s) | 406, 1137, 2097 |
| Hin1II | CATG | 9 cut(s) | 267, 382, 562, 941, 1239, 1396, 1451, 1951, 2581 |
| Hin6I | GCGC | 3 cut(s) | 404, 1135, 2095 |
| HinP1I | GCGC | 3 cut(s) | 404, 1135, 2095 |
| HincII | GTYRAC | 1 cut(s) | 954 |
| HindII | GTYRAC | 1 cut(s) | 954 |
| HindIII | AAGCTT | 1 cut(s) | 2189 |
| HpaI | GTTAAC | 1 cut(s) | 954 |
| HpaII | CCGG | 2 cut(s) | 998, 2564 |
| HphI | GGTGA | 6 cut(s) | 410, 441, 877, 889, 1060, 2553 |
| Hpy166II | GTNNAC | 3 cut(s) | 519, 954, 1067 |
| Hpy188I | TCNGA | 8 cut(s) | 104, 177, 305, 1460, 1874, 1896, 2187, 2380 |
| Hpy8I | GTNNAC | 3 cut(s) | 519, 954, 1067 |
| Hpy99I | CGWCG | 1 cut(s) | 297 |
| HpyCH4III | ACNGT | 4 cut(s) | 516, 1123, 1302, 2486 |
| HpyCH4IV | ACGT | 3 cut(s) | 1785, 1918, 2131 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 212, 221, 375, 914, 1196, 2404, 2470 |
| HpySE526I | ACGT | 3 cut(s) | 1785, 1918, 2131 |
| Hsp92II | CATG | 9 cut(s) | 267, 382, 562, 941, 1239, 1396, 1451, 1951, 2581 |
| HspAI | GCGC | 3 cut(s) | 404, 1135, 2095 |
| KpnI | GGTACC | 1 cut(s) | 1947 |
| Ksp22I | TGATCA | 2 cut(s) | 1164, 1648 |
| KspAI | GTTAAC | 1 cut(s) | 954 |
| LmnI | GCTCC | 5 cut(s) | 927, 1132, 1628, 1861, 2378 |
| Lsp1109I | GCAGC | 5 cut(s) | 260, 263, 750, 832, 2482 |
| MaeI | CTAG | 7 cut(s) | 375, 584, 737, 855, 1601, 2258, 2303 |
| MaeII | ACGT | 3 cut(s) | 1785, 1918, 2131 |
| MaeIII | GTNAC | 6 cut(s) | 28, 186, 233, 883, 2062, 2174 |
| MflI | RGATCY | 5 cut(s) | 321, 635, 1720, 2270, 2345 |
| MhlI | GDGCHC | 4 cut(s) | 521, 932, 1174, 2455 |
| MlsI | TGGCCA | 1 cut(s) | 2009 |
| MluNI | TGGCCA | 1 cut(s) | 2009 |
| MlyI | GAGTC | 3 cut(s) | 541, 1191, 1538 |
| MmeI | TCCRAC | 3 cut(s) | 98, 1726, 2298 |
| Mox20I | TGGCCA | 1 cut(s) | 2009 |
| Mph1103I | ATGCAT | 1 cut(s) | 1290 |
| MroXI | GAANNNNTTC | 4 cut(s) | 63, 1494, 2145, 2385 |
| MscI | TGGCCA | 1 cut(s) | 2009 |
| MslI | CAYNNNNRTG | 1 cut(s) | 514 |
| Msp20I | TGGCCA | 1 cut(s) | 2009 |
| MspI | CCGG | 2 cut(s) | 998, 2564 |
| MspR9I | CCNGG | 6 cut(s) | 137, 326, 331, 998, 1400, 2241 |
| Mva1269I | GAATGC | 1 cut(s) | 206 |
| MvaI | CCWGG | 5 cut(s) | 137, 326, 331, 1400, 2241 |
| MvnI | CGCG | 2 cut(s) | 1137, 1411 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 212, 221, 375, 914, 1196, 2404, 2470 |
| NciI | CCSGG | 1 cut(s) | 998 |
| NdeI | CATATG | 1 cut(s) | 768 |
| NheI | GCTAGC | 1 cut(s) | 374 |
| NlaIII | CATG | 9 cut(s) | 267, 382, 562, 941, 1239, 1396, 1451, 1951, 2581 |
| NlaIV | GGNNCC | 3 cut(s) | 620, 1945, 2508 |
| NmuCI | GTSAC | 5 cut(s) | 28, 186, 883, 2062, 2174 |
| NsiI | ATGCAT | 1 cut(s) | 1290 |
| NspI | RCATGY | 1 cut(s) | 2581 |
| NspV | TTCGAA | 1 cut(s) | 2584 |
| OliI | CACNNNNGTG | 1 cut(s) | 514 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 301 |
| PctI | GAATGC | 1 cut(s) | 206 |
| PdmI | GAANNNNTTC | 4 cut(s) | 63, 1494, 2145, 2385 |
| PfoI | TCCNGGA | 1 cut(s) | 135 |
| PkrI | GCNGC | 5 cut(s) | 250, 253, 765, 847, 2472 |
| PleI | GAGTC | 3 cut(s) | 540, 1190, 1538 |
| PpsI | GAGTC | 3 cut(s) | 540, 1190, 1538 |
| Ppu21I | YACGTR | 1 cut(s) | 1786 |
| PpuMI | RGGWCCY | 1 cut(s) | 1030 |
| PshAI | GACNNNNGTC | 1 cut(s) | 26 |
| Psp5II | RGGWCCY | 1 cut(s) | 1030 |
| Psp6I | CCWGG | 5 cut(s) | 135, 324, 329, 1398, 2239 |
| PspEI | GGTNACC | 1 cut(s) | 883 |
| PspGI | CCWGG | 5 cut(s) | 135, 324, 329, 1398, 2239 |
| PspN4I | GGNNCC | 3 cut(s) | 620, 1945, 2508 |
| PspPI | GGNCC | 1 cut(s) | 1030 |
| PspPPI | RGGWCCY | 1 cut(s) | 1030 |
| PsuI | RGATCY | 5 cut(s) | 321, 635, 1720, 2270, 2345 |
| RsaI | GTAC | 2 cut(s) | 599, 1945 |
| RsaNI | GTAC | 2 cut(s) | 598, 1944 |
| RseI | CAYNNNNRTG | 1 cut(s) | 514 |
| SatI | GCNGC | 5 cut(s) | 249, 252, 764, 846, 2471 |
| Sau96I | GGNCC | 1 cut(s) | 1030 |
| SchI | GAGTC | 3 cut(s) | 541, 1191, 1538 |
| ScrFI | CCNGG | 6 cut(s) | 137, 326, 331, 998, 1400, 2241 |
| SduI | GDGCHC | 4 cut(s) | 521, 932, 1174, 2455 |
| SfcI | CTRYAG | 4 cut(s) | 540, 680, 1275, 1726 |
| SfuI | TTCGAA | 1 cut(s) | 2584 |
| SinI | GGWCC | 1 cut(s) | 1030 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 514 |
| SmlI | CTYRAG | 3 cut(s) | 983, 1173, 2156 |
| SmoI | CTYRAG | 3 cut(s) | 983, 1173, 2156 |
| SsiI | CCGC | 6 cut(s) | 430, 1059, 1188, 1310, 1983, 2390 |
| SspMI | CTAG | 7 cut(s) | 375, 584, 737, 855, 1601, 2258, 2303 |
| StyD4I | CCNGG | 6 cut(s) | 135, 324, 329, 996, 1398, 2239 |
| StyI | CCWWGG | 3 cut(s) | 923, 1033, 2334 |
| TaaI | ACNGT | 4 cut(s) | 516, 1123, 1302, 2486 |
| TaiI | ACGT | 3 cut(s) | 1788, 1921, 2134 |
| TatI | WGTACW | 1 cut(s) | 597 |
| TscAI | CASTG | 4 cut(s) | 1128, 1174, 1432, 2460 |
| TseFI | GTSAC | 5 cut(s) | 28, 186, 883, 2062, 2174 |
| TseI | GCWGC | 5 cut(s) | 248, 251, 763, 845, 2470 |
| Tsp45I | GTSAC | 5 cut(s) | 28, 186, 883, 2062, 2174 |
| TspDTI | ATGAA | 7 cut(s) | 395, 435, 617, 2154, 2376, 2607, 2675 |
| TspGWI | ACGGA | 1 cut(s) | 961 |
| TspRI | CASTG | 4 cut(s) | 1128, 1174, 1432, 2460 |
| VneI | GTGCAC | 1 cut(s) | 517 |
| VpaK11BI | GGWCC | 1 cut(s) | 1030 |
| XapI | RAATTY | 5 cut(s) | 360, 1492, 1675, 2606, 2630 |
| XbaI | TCTAGA | 1 cut(s) | 1600 |
| XceI | RCATGY | 1 cut(s) | 2581 |
| XmiI | GTMKAC | 1 cut(s) | 1066 |
| XmnI | GAANNNNTTC | 4 cut(s) | 63, 1494, 2145, 2385 |
| XspI | CTAG | 7 cut(s) | 375, 584, 737, 855, 1601, 2258, 2303 |
| Zsp2I | ATGCAT | 1 cut(s) | 1290 |