Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000287.1

Orthogroup ID

OG0001473

Physical Location & Seq

Genomic Coordinates Forward (+)

32273 .. 34954

Gene Structure 2682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000287.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

atggcggaatatgctgtttcgactgctgtgagaaagctcacaacttggttgattgaagaagcagttctgttgaaaggtgtgagtgaggaagttcagcatctcagagacacactgagttggattcaaggtttcctcaaggatgctgatgccgtgcaagagagatcagaaagatttcaggcttggatgtcacaaataagagaagtagcattcgatgctgaagtggcaatagaaacttacatcagcgaggcagcagcacgaagttcatggagaaaagtcctgaagccaattcatcttttcaaaatccaaagaaaaatcgaaaagatccaggccaggatggagaacatctcaaaacaaaaggaaatgttcggcataactagcatcaacaatcaggaagggggtgaagcaaatgaaaggttgcggcggtggagacaaccgtcaccgaacatgcaggaagatgatttggttgaccttgttgaagacactaaggctttgataacacaattgtctactatggggaggagccgttgtgttgtttctattgtgggaatgggaggtttaggcaagaccactctggcaaagaagttgtataatcaccctcagcttgggaatcaatttgcttgtagatcctttgtttatgtgtctcaagagtacaaaagaagagaaattctacaaaaaatcattgaagatgtaaattgtcctcacgatagaggtgatttggagaaactaaaagaggagacgatggttgagatgctgcacgtgttcctgaaagataggaggtatctggttattcttgatgatatatggaaaaaggaggtttgggatggtcttaaagctgcatttcctagtggggagatgggaagtaaggtgatgctcaccactcgctttaaggatgttgctgtatatgcagatccaaggagcattccccatgagctgcggatgttaacagatgacgagagcttggaactgttcctcaagaaagcactcccgggagtggatgatgtgccccctaacttgcagaaactaggaagagagatggtggttaaatgtggtggtctgcctctggcagtagttgttctcggaggattactgtccacgaaaatgaagaccacagtggagtgggagcgggtgcttcaaaacatcagttggcatttgatcagtgctcaagatcaagtctccgcaatcttagccctaagctacattgacttgcctatgtatttaaaattatgttttctccatttgggtctttttcccgaagattccttcatagagaaaatgtatttgattcgactgtgggttgcggaaggattcttaccacaacaaggagaagaaatagaagaaggggtggctgaatattgcttgaatcagttgattgataggtgcatgatccagatggggacgctaacatatctcggcagcgttaaaaccattcgcattcatgatgttctccgagatttctccgtgtcaaaggggagggaagaaaatttcctagggatatatacggcgcaagaacacgaattatcagcctccctacactcgatcaaatctcaaaggcttgccatccatgccgcatatgatgggtatgcatttctaaaccaatatactcatttacgctctctccatttcttcggtgaggttcataaaaacatagactttacttgcaagaattttaagttgctgagggtcttagaactatattatagcaataaacgttctaagcgtgattgggggggatgtagtgtagttggggacttacttcagttgaggtttctcggacttagagaagtaacttatggttcaagtctgtcatccttgaagaacttacaaacacttgatatgagattttgtggtttttatgggatgttcaaagagttgaagatagataatctgagacatttactcttacctgaaagaaatccaattgatttaacactgggtaccatgatccatttacaaaccctaaaaggcataacgggtggaaaatggatagaagatggtttggccaaaatgattaatcttcgacgactaaagataagaacactgtcacgagagggagtgacattagtgatttctattatgcaaagattgcgccaccttcattcgttgtcgctgaccaattatgaaattgaagaggaattatttccaccacttgagggactatctcaatgtgaccatcttcagaagcttcgtttatgcggaaagatagagaagctacctgatgcaaatggattcccacgaaacctcgtaaagctagttttgatgagatccaacctccaaaaagattcaatagttatactagagaggttgcccaacttaaagatgctttccttggggcacggatcttacccattcagtgaattggtttgctcctcagaagggtttccagagctacaagttctacatttaatatgggaggagttggaggtttggaaggtggaagaaagggcactgaagaagctcaggcagctaacgatagaccgttgttcacaattaaagcaggtgccggaaggattgaagtcattgactactctacaggaattagatatttatgattcacctgagtttgaacacatgcttcggaccaaggaagacctgaccgaattcacgaaaaaacactcgattaaggttgtccaaggacatcgtaacactctcggttactatatgaaatggtcttcataccattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0023052 GO:0033554 GO:0034050 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

893

Amino Acids

102.97

Weight (kDa)

8.04

Isoelectric Point (pI)

49.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001473)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46530 AT3G46710 AT3G46730
fragaria_vesca	FvH4_5g24310 FvH4_5g24320
malus_domestica	MD07G1251200.v1.1
prunus_persica	Prupe.2G274900_v2.0.a1 Prupe.2G274900_v2.0.a1 Prupe.6G153200_v2.0.a1 Prupe.6G153300_v2.0.a1 Prupe.6G153400_v2.0.a1 Prupe.8G127100_v2.0.a1 Prupe.8G127200_v2.0.a1 Prupe.8G127300_v2.0.a1
pyrus_communis	pycom07g22380
rosa_chinensis	RchiOBHm_Chr1g0339701 RchiOBHm_Chr5g0004521 RchiOBHm_Chr5g0004531 RchiOBHm_Chr7g0214541
rosa_laevigata	RLG00000002734
rosa_multiflora	Rmu_sc0003758.1_g000008 Rmu_sc0003919.1_g000021 Rmu_sc0004199.1_g000044 Rmu_sc0004199.1_g000045 Rmu_sc0004199.1_g000046 Rmu_ssc0000287.1_g000011
rosa_roxburghii	Rroxscaffold_1G00071000 Rroxscaffold_3G00245250 Rroxscaffold_3G00245260
rosa_rugosa	Rorug04G0412200 Rorug07G0146200 Rorug07G0146300 Rorug07G0146400
rosa_samantha	Rh1AG157700 Rh1CG147400 Rh5AG040000 Rh5BG039000 Rh5BG039100 Rh5BG039200 Rh5BG039400 Rh5CG043200 Rh5DG038900 Rh7AG281600 Rh7BG273500 Rh7BG273600 Rh7CG300900 Rh7CG301000 Rh7DG285700
rosa_wichuraiana	Rw1G013060 Rw5G003820 Rw7G024090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2485
Acc36I	ACCTGC	1 cut(s)	2485
Acc65I	GGTACC	1 cut(s)	1934
AccB1I	GGYRCC	2 cut(s)	1934, 2497
AccBSI	CCGCTC	1 cut(s)	1123
AccI	GTMKAC	1 cut(s)	506
AciI	CCGC	9 cut(s)	5, 418, 421, 934, 1123, 1176, 1298, 1566, 2193
AclI	AACGTT	1 cut(s)	1708
AclWI	GGATC	7 cut(s)	316, 618, 902, 1378, 1936, 2256, 2344
AcoI	YGGCCR	1 cut(s)	1998
AcsI	RAATTY	4 cut(s)	663, 1480, 1663, 2597
AcuI	CTGAAG	5 cut(s)	237, 299, 1739, 2159, 2468
AcvI	CACGTG	1 cut(s)	757
AfaI	GTAC	2 cut(s)	650, 1936
AfiI	CCNNNNNNNGG	5 cut(s)	602, 991, 1319, 2150, 2373
AflIII	ACRYGT	1 cut(s)	756
AjnI	CCWGG	2 cut(s)	324, 329
Alw21I	GWGCWC	1 cut(s)	1162
Alw26I	GTCTC	6 cut(s)	99, 421, 645, 728, 1177, 1882
AlwI	GGATC	7 cut(s)	316, 618, 902, 1378, 1936, 2256, 2344
Ama87I	CYCGRG	1 cut(s)	985
AoxI	GGCC	2 cut(s)	327, 1998
ApeKI	GCWGC	7 cut(s)	248, 251, 751, 833, 931, 1413, 2461
ApoI	RAATTY	4 cut(s)	663, 1480, 1663, 2597
AseI	ATTAAT	1 cut(s)	2010
Asp700I	GAANNNNTTC	4 cut(s)	63, 171, 2136, 2376
Asp718I	GGTACC	1 cut(s)	1934
AspA2I	CCTAGG	1 cut(s)	1486
AspLEI	GCGC	2 cut(s)	1504, 2088
AspS9I	GGNCC	1 cut(s)	2577
AsuC2I	CCSGG	2 cut(s)	986, 987
AsuHPI	GGTGA	8 cut(s)	410, 429, 584, 722, 865, 877, 1640, 2544
AvaI	CYCGRG	1 cut(s)	985
AvaII	GGWCC	1 cut(s)	2577
AvrII	CCTAGG	1 cut(s)	1486
BaeGI	GKGCMC	3 cut(s)	1005, 2334, 2446
BalI	TGGCCA	1 cut(s)	2000
BanI	GGYRCC	2 cut(s)	1934, 2497
BarI	GAAGNNNNNNTAC	2 cut(s)	1293, 1325
BauI	CACGAG	1 cut(s)	2043
BbrPI	CACGTG	1 cut(s)	757
BbsI	GAAGAC	4 cut(s)	483, 1109, 2592, 2661
Bbv12I	GWGCWC	1 cut(s)	1162
BbvCI	CCTCAGC	2 cut(s)	597, 1676
BbvI	GCAGC	7 cut(s)	260, 263, 738, 820, 918, 1425, 2473
BceAI	ACGGC	3 cut(s)	134, 507, 1515
BciT130I	CCWGG	2 cut(s)	326, 331
BclI	TGATCA	1 cut(s)	1152
BcnI	CCSGG	2 cut(s)	986, 987
BcoDI	GTCTC	6 cut(s)	99, 421, 645, 728, 1177, 1882
BfaI	CTAG	6 cut(s)	375, 843, 1022, 1487, 2249, 2294
BfmI	CTRYAG	1 cut(s)	2528
BfuAI	ACCTGC	1 cut(s)	2485
BisI	GCNGC	9 cut(s)	249, 252, 419, 752, 834, 932, 1414, 1566, 2462
BlnI	CCTAGG	1 cut(s)	1486
BlsI	GCNGC	9 cut(s)	250, 253, 420, 753, 835, 933, 1415, 1567, 2463
Bme1390I	CCNGG	4 cut(s)	326, 331, 986, 987
Bme18I	GGWCC	1 cut(s)	2577
BmeT110I	CYCGRG	1 cut(s)	985
BmgT120I	GGNCC	1 cut(s)	2577
BmiI	GGNNCC	3 cut(s)	521, 1936, 2499
BmrFI	CCNGG	4 cut(s)	326, 331, 986, 987
BmrI	ACTGGG	1 cut(s)	1940
BmsI	GCATC	9 cut(s)	106, 130, 136, 202, 387, 738, 858, 2206, 2307
BmuI	ACTGGG	1 cut(s)	1940
BoxI	GACNNNNGTC	1 cut(s)	433
BpiI	GAAGAC	4 cut(s)	483, 1109, 2592, 2661
BplI	GAGNNNNNCTC	2 cut(s)	329, 361
Bpu10I	CCTNAGC	4 cut(s)	597, 1190, 1676, 2456
BpuEI	CTTGAG	5 cut(s)	119, 627, 956, 1146, 2168
BpuMI	CCSGG	2 cut(s)	986, 987
BsaAI	YACGTR	1 cut(s)	757
BsaJI	CCNNGG	6 cut(s)	911, 985, 1486, 2325, 2580, 2629
BsaXI	ACNNNNNCTCC	6 cut(s)	508, 511, 538, 541, 1599, 1629
Bsc4I	CCNNNNNNNGG	5 cut(s)	602, 991, 1319, 2150, 2373
Bse1I	ACTGG	1 cut(s)	1935
BseBI	CCWGG	2 cut(s)	326, 331
BseDI	CCNNGG	6 cut(s)	911, 985, 1486, 2325, 2580, 2629
BseLI	CCNNNNNNNGG	5 cut(s)	602, 991, 1319, 2150, 2373
BseMII	CTCAG	8 cut(s)	104, 115, 611, 1667, 1877, 2382, 2470, 2547
BseNI	ACTGG	1 cut(s)	1935
BseRI	GAGGAG	4 cut(s)	532, 746, 2356, 2426
BseSI	GKGCMC	3 cut(s)	1005, 2334, 2446
BseXI	GCAGC	7 cut(s)	260, 263, 738, 820, 918, 1425, 2473
BsgI	GTGCAG	1 cut(s)	737
BshFI	GGCC	2 cut(s)	329, 2000
BshNI	GGYRCC	2 cut(s)	1934, 2497
BsiHKAI	GWGCWC	1 cut(s)	1162
BsiHKCI	CYCGRG	1 cut(s)	985
BsiSI	CCGG	2 cut(s)	986, 2501
BslFI	GGGAC	3 cut(s)	1408, 1760, 2166
BslI	CCNNNNNNNGG	5 cut(s)	602, 991, 1319, 2150, 2373
BsmAI	GTCTC	6 cut(s)	99, 421, 645, 728, 1177, 1882
BsmBI	CGTCTC	1 cut(s)	728
BsmFI	GGGAC	3 cut(s)	1408, 1760, 2166
BsmI	GAATGC	3 cut(s)	206, 918, 1431
BsnI	GGCC	2 cut(s)	329, 2000
BsoBI	CYCGRG	1 cut(s)	985
Bsp1286I	GDGCHC	4 cut(s)	1005, 1162, 2334, 2446
BspACI	CCGC	9 cut(s)	5, 418, 421, 934, 1123, 1176, 1298, 1566, 2193
BspANI	GGCC	2 cut(s)	329, 2000
BspCNI	CTCAG	8 cut(s)	105, 114, 610, 1668, 1878, 2381, 2469, 2548
BspHI	TCATGA	1 cut(s)	1435
BspLI	GGNNCC	3 cut(s)	521, 1936, 2499
BspMI	ACCTGC	1 cut(s)	2485
BspPI	GGATC	7 cut(s)	316, 618, 902, 1378, 1936, 2256, 2344
BspT107I	GGYRCC	2 cut(s)	1934, 2497
BsrBI	CCGCTC	1 cut(s)	1123
BsrI	ACTGG	1 cut(s)	1935
BssECI	CCNNGG	6 cut(s)	911, 985, 1486, 2325, 2580, 2629
BssSI	CACGAG	1 cut(s)	2043
BssT1I	CCWWGG	5 cut(s)	911, 1486, 2325, 2580, 2629
Bst2BI	CACGAG	1 cut(s)	2043
Bst2UI	CCWGG	2 cut(s)	326, 331
Bst4CI	ACNGT	7 cut(s)	435, 966, 1089, 1111, 1290, 2040, 2477
Bst6I	CTCTTC	3 cut(s)	652, 1021, 2121
BstAPI	GCANNNNNTGC	2 cut(s)	212, 2083
BstBAI	YACGTR	1 cut(s)	757
BstC8I	GCNNGC	1 cut(s)	1554
BstHHI	GCGC	2 cut(s)	1504, 2088
BstMAI	GTCTC	6 cut(s)	99, 421, 645, 728, 1177, 1882
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 212, 221, 375, 902, 1184, 1562, 2083, 2461
BstNI	CCWGG	2 cut(s)	326, 331
BstNSI	RCATGY	2 cut(s)	448, 2572
BstPAI	GACNNNNGTC	1 cut(s)	433
BstSCI	CCNGG	4 cut(s)	324, 329, 984, 985
BstSFI	CTRYAG	1 cut(s)	2528
BstSLI	GKGCMC	3 cut(s)	1005, 2334, 2446
BstV1I	GCAGC	7 cut(s)	260, 263, 738, 820, 918, 1425, 2473
BstV2I	GAAGAC	4 cut(s)	483, 1109, 2592, 2661
BstX2I	RGATCY	5 cut(s)	321, 623, 907, 2261, 2336
BstYI	RGATCY	5 cut(s)	321, 623, 907, 2261, 2336
BsuRI	GGCC	2 cut(s)	329, 2000
BtsIMutI	CAGTG	7 cut(s)	110, 1116, 1162, 1928, 2036, 2356, 2444
BveI	ACCTGC	1 cut(s)	2485
Cac8I	GCNNGC	1 cut(s)	1554
CciI	TCATGA	1 cut(s)	1435
CfoI	GCGC	2 cut(s)	1504, 2088
Cfr13I	GGNCC	1 cut(s)	2577
Cfr9I	CCCGGG	1 cut(s)	985
CseI	GACGC	1 cut(s)	1405
Csp6I	GTAC	2 cut(s)	649, 1935
CviAII	CATG	8 cut(s)	264, 445, 926, 1381, 1436, 1562, 1939, 2569
CviQI	GTAC	2 cut(s)	649, 1935
DraI	TTTAAA	1 cut(s)	1218
EaeI	YGGCCR	1 cut(s)	1998
Eam1104I	CTCTTC	3 cut(s)	652, 1021, 2121
EarI	CTCTTC	3 cut(s)	652, 1021, 2121
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	5 cut(s)	911, 1486, 2325, 2580, 2629
Eco47I	GGWCC	1 cut(s)	2577
Eco57I	CTGAAG	5 cut(s)	237, 299, 1739, 2159, 2468
Eco72I	CACGTG	1 cut(s)	757
Eco88I	CYCGRG	1 cut(s)	985
EcoRI	GAATTC	1 cut(s)	2597
EcoRII	CCWGG	2 cut(s)	324, 329
EcoT14I	CCWWGG	5 cut(s)	911, 1486, 2325, 2580, 2629
EcoT22I	ATGCAT	1 cut(s)	1585
ErhI	CCWWGG	5 cut(s)	911, 1486, 2325, 2580, 2629
Esp3I	CGTCTC	1 cut(s)	728
FaeI	CATG	8 cut(s)	267, 448, 929, 1384, 1439, 1565, 1942, 2572
FaqI	GGGAC	3 cut(s)	1408, 1760, 2166
FatI	CATG	8 cut(s)	263, 444, 925, 1380, 1435, 1561, 1938, 2568
FauI	CCCGC	1 cut(s)	1116
FauNDI	CATATG	1 cut(s)	1570
FbaI	TGATCA	1 cut(s)	1152
FblI	GTMKAC	1 cut(s)	506
Fnu4HI	GCNGC	9 cut(s)	249, 252, 419, 752, 834, 932, 1414, 1566, 2462
Fsp4HI	GCNGC	9 cut(s)	249, 252, 419, 752, 834, 932, 1414, 1566, 2462
FspBI	CTAG	6 cut(s)	375, 843, 1022, 1487, 2249, 2294
GlaI	GCGC	2 cut(s)	1503, 2087
GluI	GCNGC	9 cut(s)	249, 252, 419, 752, 834, 932, 1414, 1566, 2462
HaeIII	GGCC	2 cut(s)	329, 2000
HapII	CCGG	2 cut(s)	986, 2501
HgaI	GACGC	1 cut(s)	1405
HhaI	GCGC	2 cut(s)	1504, 2088
Hin1II	CATG	8 cut(s)	267, 448, 929, 1384, 1439, 1565, 1942, 2572
Hin6I	GCGC	2 cut(s)	1502, 2086
HinP1I	GCGC	2 cut(s)	1502, 2086
HincII	GTYRAC	2 cut(s)	466, 942
HindII	GTYRAC	2 cut(s)	466, 942
HindIII	AAGCTT	1 cut(s)	2180
HinfI	GANTC	9 cut(s)	121, 607, 1256, 1282, 1305, 1360, 2226, 2279, 2549
HpaI	GTTAAC	1 cut(s)	942
HpaII	CCGG	2 cut(s)	986, 2501
HphI	GGTGA	8 cut(s)	410, 429, 584, 722, 865, 877, 1640, 2544
Hpy166II	GTNNAC	5 cut(s)	466, 507, 942, 1092, 2483
Hpy188I	TCNGA	9 cut(s)	104, 166, 1079, 1448, 1772, 1887, 2178, 2371, 2577
Hpy8I	GTNNAC	5 cut(s)	466, 507, 942, 1092, 2483
Hpy99I	CGWCG	1 cut(s)	2022
HpyAV	CCTTC	8 cut(s)	386, 1270, 1295, 1331, 2102, 2366, 2422, 2498
HpyCH4III	ACNGT	7 cut(s)	435, 966, 1089, 1111, 1290, 2040, 2477
HpyCH4IV	ACGT	2 cut(s)	756, 1708
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 212, 221, 375, 902, 1184, 1562, 2083, 2461
HpySE526I	ACGT	2 cut(s)	756, 1708
Hsp92II	CATG	8 cut(s)	267, 448, 929, 1384, 1439, 1565, 1942, 2572
HspAI	GCGC	2 cut(s)	1502, 2086
KpnI	GGTACC	1 cut(s)	1938
Ksp22I	TGATCA	1 cut(s)	1152
KspAI	GTTAAC	1 cut(s)	942
LmnI	GCTCC	4 cut(s)	519, 915, 1120, 2369
Lsp1109I	GCAGC	7 cut(s)	260, 263, 738, 820, 918, 1425, 2473
LweI	GCATC	9 cut(s)	106, 130, 136, 202, 387, 738, 858, 2206, 2307
MaeI	CTAG	6 cut(s)	375, 843, 1022, 1487, 2249, 2294
MaeII	ACGT	2 cut(s)	756, 1708
MaeIII	GTNAC	8 cut(s)	186, 435, 1783, 2040, 2053, 2165, 2639, 2651
MbiI	CCGCTC	1 cut(s)	1123
MfeI	CAATTG	2 cut(s)	500, 1917
MflI	RGATCY	5 cut(s)	321, 623, 907, 2261, 2336
MhlI	GDGCHC	4 cut(s)	1005, 1162, 2334, 2446
MlsI	TGGCCA	1 cut(s)	2000
MluNI	TGGCCA	1 cut(s)	2000
MmeI	TCCRAC	3 cut(s)	98, 2289, 2397
Mox20I	TGGCCA	1 cut(s)	2000
Mph1103I	ATGCAT	1 cut(s)	1585
MroXI	GAANNNNTTC	4 cut(s)	63, 171, 2136, 2376
MscI	TGGCCA	1 cut(s)	2000
MslI	CAYNNNNRTG	1 cut(s)	1097
Msp20I	TGGCCA	1 cut(s)	2000
MspI	CCGG	2 cut(s)	986, 2501
MspR9I	CCNGG	4 cut(s)	326, 331, 986, 987
MunI	CAATTG	2 cut(s)	500, 1917
Mva1269I	GAATGC	3 cut(s)	206, 918, 1431
MvaI	CCWGG	2 cut(s)	326, 331
MwoI	GCNNNNNNNGC	9 cut(s)	11, 212, 221, 375, 902, 1184, 1562, 2083, 2461
NciI	CCSGG	2 cut(s)	986, 987
NdeI	CATATG	1 cut(s)	1570
NlaIII	CATG	8 cut(s)	267, 448, 929, 1384, 1439, 1565, 1942, 2572
NlaIV	GGNNCC	3 cut(s)	521, 1936, 2499
NmeAIII	GCCGAG	1 cut(s)	1389
NmuCI	GTSAC	5 cut(s)	186, 435, 2040, 2053, 2165
NsiI	ATGCAT	1 cut(s)	1585
NspI	RCATGY	2 cut(s)	448, 2572
PagI	TCATGA	1 cut(s)	1435
PaqCI	CACCTGC	1 cut(s)	2485
PcsI	WCGNNNNNNNCGW	1 cut(s)	1714
PctI	GAATGC	3 cut(s)	206, 918, 1431
PdmI	GAANNNNTTC	4 cut(s)	63, 171, 2136, 2376
PfeI	GAWTC	9 cut(s)	121, 607, 1256, 1282, 1305, 1360, 2226, 2279, 2549
PkrI	GCNGC	9 cut(s)	250, 253, 420, 753, 835, 933, 1415, 1567, 2463
PmaCI	CACGTG	1 cut(s)	757
PmlI	CACGTG	1 cut(s)	757
Ppu21I	YACGTR	1 cut(s)	757
PshAI	GACNNNNGTC	1 cut(s)	433
PshBI	ATTAAT	1 cut(s)	2010
Psp1406I	AACGTT	1 cut(s)	1708
Psp6I	CCWGG	2 cut(s)	324, 329
PspCI	CACGTG	1 cut(s)	757
PspGI	CCWGG	2 cut(s)	324, 329
PspN4I	GGNNCC	3 cut(s)	521, 1936, 2499
PspPI	GGNCC	1 cut(s)	2577
PsuI	RGATCY	5 cut(s)	321, 623, 907, 2261, 2336
RsaI	GTAC	2 cut(s)	650, 1936
RsaNI	GTAC	2 cut(s)	649, 1935
RseI	CAYNNNNRTG	1 cut(s)	1097
SatI	GCNGC	9 cut(s)	249, 252, 419, 752, 834, 932, 1414, 1566, 2462
Sau96I	GGNCC	1 cut(s)	2577
ScrFI	CCNGG	4 cut(s)	326, 331, 986, 987
SduI	GDGCHC	4 cut(s)	1005, 1162, 2334, 2446
SfaNI	GCATC	9 cut(s)	106, 130, 136, 202, 387, 738, 858, 2206, 2307
SfcI	CTRYAG	1 cut(s)	2528
SinI	GGWCC	1 cut(s)	2577
SmaI	CCCGGG	1 cut(s)	987
SmiMI	CAYNNNNRTG	1 cut(s)	1097
SmlI	CTYRAG	5 cut(s)	134, 642, 971, 1161, 2147
SmoI	CTYRAG	5 cut(s)	134, 642, 971, 1161, 2147
SsiI	CCGC	9 cut(s)	5, 418, 421, 934, 1123, 1176, 1298, 1566, 2193
SspI	AATATT	1 cut(s)	1352
SspMI	CTAG	6 cut(s)	375, 843, 1022, 1487, 2249, 2294
StyD4I	CCNGG	4 cut(s)	324, 329, 984, 985
StyI	CCWWGG	5 cut(s)	911, 1486, 2325, 2580, 2629
TaaI	ACNGT	7 cut(s)	435, 966, 1089, 1111, 1290, 2040, 2477
TaiI	ACGT	2 cut(s)	759, 1711
TaqI	TCGA	7 cut(s)	20, 210, 315, 1285, 1535, 2017, 2615
TaqII	GACCGA	1 cut(s)	2609
TatI	WGTACW	1 cut(s)	648
TauI	GCSGC	2 cut(s)	421, 1568
TfiI	GAWTC	9 cut(s)	121, 607, 1256, 1282, 1305, 1360, 2226, 2279, 2549
TscAI	CASTG	7 cut(s)	117, 1116, 1162, 1935, 2043, 2356, 2451
TseFI	GTSAC	5 cut(s)	186, 435, 2040, 2053, 2165
TseI	GCWGC	7 cut(s)	248, 251, 751, 833, 931, 1413, 2461
Tsp45I	GTSAC	5 cut(s)	186, 435, 2040, 2053, 2165
TspGWI	ACGGA	2 cut(s)	1447, 2349
TspMI	CCCGGG	1 cut(s)	985
TspRI	CASTG	7 cut(s)	117, 1116, 1162, 1935, 2043, 2356, 2451
VpaK11BI	GGWCC	1 cut(s)	2577
VspI	ATTAAT	1 cut(s)	2010
XapI	RAATTY	4 cut(s)	663, 1480, 1663, 2597
XceI	RCATGY	2 cut(s)	448, 2572
XmaI	CCCGGG	1 cut(s)	985
XmaJI	CCTAGG	1 cut(s)	1486
XmiI	GTMKAC	1 cut(s)	506
XmnI	GAANNNNTTC	4 cut(s)	63, 171, 2136, 2376
XspI	CTAG	6 cut(s)	375, 843, 1022, 1487, 2249, 2294
Zsp2I	ATGCAT	1 cut(s)	1585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.