Rorug07G0146200

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
11515365 .. 11531607
16243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0146200.1

Sequence Viewer

Length: 2022 bp
ATGGAAACGAAAACAGAGTGGTTGGTTCCGCATCAGCATCAGGGTGATTTTGCATCGAACGCAAACATGGACAGCATGGAGGTGGACGGTTCCGGCCCTTCAAAGACCTCCTACGCGCCTTTTGTATCCGATGAGATGCGCCATTGGTTGAGGTCTCTTGACGCTCAGGACCGCAAGAAGATGTTGGCCATCAAGCAGAAGGAGGCGGAGATGTTGGCCCTCATGGAGAAGGAGGCGGAGATGTTGGCCCGCATGGAGACGGCGAGGTTGGCCCGCCTGGATACGGCGAGGGAGATGGAGACTGGCGGCCCTGCTGGTGGCGCGTTTGGAGGGACCTCTTTCACTCACTTCTTCCCCAAAGAACGAGCATCAAAGATGCTGCAAGCTTGGCCTATGCTGGAATCTTCCTTACAAGACTTTGGCATTTCAAGCTCTCTCAATATCGCAAACAATTCCATCACCGTTTCAACAACCGCAAGGACTAAGGACGCATATGCTATTGACAAGGCTCAGTGTCTGCTTGAACTTTTGTCTGCAACTGATGTTCCGCCGTCCATGGCATTAGAAACATTCACTGGCAGTAGGCAGTACAGCCTCGTTAAGATCGGGGACATATGCTCAAAATACGGGCTCCAAAAGGAGGAATATCTTCAATGGTTGGAACGCCCCTTCCATTTCCTAGAGGTGCTTTCCACAGTGTATCCCTTTCATCTCTTTCTTAACGTAGACACAATGACTGCTGTGTCTGCCGTGGGCGATTCATCTACACTACCTCGCCTCAGCCCTGGGGAGTATTTAGAAATTTGCATTAACAGTATTTGGCCTTCAATGGATGATATTGGGGACGAGATGGAGAAGTCTCGCCCTTTGATGAACGAAGGTGACCTGCTTGAAGCTTCCTCTCTATATTCCTTATTGGATGAAAAACAAGCAAAAAGGTTACAAGAAACTTGGCCTTTGGTGGAGTCTTTCTTAAAAGAGTATGGTAATTCATGCTCTCTGAATGTGGCTGAGCGTCACTTGACATTCTCAACAACAAGAAGGACCACAGAACCATATATTATTGACAAGGCTTGGTGTCTTCTTGAACTTTTGTCAACAACTCATGTTCCAGTGCCTATGGCAATAGATATAATAGATGGCAGCGTGGAACATGATTACATCAAGATTGGTTTTCAAGAAGGTGGGCTTTGCTCAATACATGGGATCAAGGAGGAGGAGTACTGTAAACGATGGAATTGTCTTCGCTGGTCACTACAGGCACTTTCAGAACTGAAGGGTTGTGATCTGTTTCTTAATGCACACACTGTTACTGCTGTGGGGACTTCACGTGAAGTAAGTCGTTTGATCAGGTTGATTGTGGAAGACTGCATCATTTCCAATGTGTGTCCTGCAACTGCTGCCAGGAATGTGAGTGATAACTTATTCGAAACATACCGACCAACTGAAAACACAGAGGACCCACACATCACACACATGAAGATGAAGTATGACGGCATGGCTGAGATCACCTGTTTCTGTAGGTTTTACGCTAATGCGACCGTGTTGGAAAAAGATTGGCAGATGTTGCAGTCGTGTTTGAAGGATTACAGCAATATTTCATGCACACTGGTTGCGAACAACTGTGGCATGACGGTCTCAATAGCCAGAAGCATTGGGGATTCAGATATTGTTGGGAAGGCTTGGGATCTTCTTCGACTCATGTCAGCAACTAAAGTTCCGGCTCTTTTGGCAGAGATGATACTGAAAGGCACTCTGCATTGTGTCTTCATCAAGACTGGGTATGACGGTGGCCTTTGCTCAAAAATTGGGATCAAGATGCGTCAATTTTATCTACTGCTGCCACGTCTTGAGTACATCTTGAAGAATGCTGCAAGCCGAGCAGGTTGCAAGCTTTTGATCAAGGGTGAAACTATAATTGTGTTGGGGAAATATCCTGCGGTCTTAAATTTGTTCGAGATGCGTGCACGGAAATGGCTGGAAGAACACAAGGATGATGATTATGAAAGTCGCAAAGATTGA

Protein Analysis

673

Amino Acids

75.78

Weight (kDa)

5.45

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_1st PF17903 113 - 179 3e-09 Krr1 KH1 domain
KH_KRR1_1st PF17903 308 - 379 1.9e-08 Krr1 KH1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000372)

Species Orthologous Gene IDs
pyrus_communis pycom04g09000
rosa_chinensis RchiOBHm_Chr1g0319921 RchiOBHm_Chr2g0124671 RchiOBHm_Chr3g0488631 RchiOBHm_Chr3g0495191 RchiOBHm_Chr5g0067451 RchiOBHm_Chr6g0269581 RchiOBHm_Chr7g0210411 RchiOBHm_Chr7g0212341 RchiOBHm_Chr7g0214191
rosa_laevigata RLG00000003882 RLG00000008030 RLG00000011591 RLG00000016235 RLG00000018631 RLG00000031951 RLG00000032135 RLG00000032548 RLG00000033239
rosa_multiflora Rmu_sc0000281.1_g000015 Rmu_sc0000516.1_g000020 Rmu_sc0000816.1_g000025 Rmu_sc0001850.1_g000002 Rmu_sc0003260.1_g000025 Rmu_sc0007581.1_g000007 Rmu_sc0009241.1_g000001
rosa_roxburghii Rroxscaffold_3G00218290 Rroxscaffold_3G00240930 Rroxscaffold_4G00300430 Rroxscaffold_5G00334810 Rroxscaffold_5G00360330 Rroxscaffold_7G00180190 Rroxscaffold_7G00192890
rosa_rugosa Rorug01G0357800 Rorug01G0357900 Rorug03G0350400 Rorug05G0174000 Rorug05G0231100 Rorug05G0231100 Rorug05G0231200 Rorug05G0231200 Rorug05G0577100 Rorug07G0029800 Rorug07G0029900 Rorug07G0146200
rosa_samantha Rh1AG039300 Rh1AG155100 Rh1AG173000 Rh1AG200900 Rh1AG276400 Rh1BG055400 Rh1BG111700 Rh1CG081000 Rh1CG161100 Rh1CG161200 Rh1CG247000 Rh1CG264000 Rh1DG031600 Rh1DG163400 Rh2AG236000 Rh2AG236100 Rh2AG277400 Rh2AG277500 Rh2AG309700 Rh2AG339600 Rh2BG221000 Rh2DG243300 Rh2DG243400 Rh2DG267900 Rh2DG434000 Rh3AG280300 Rh3AG288700 Rh3CG224100 Rh4AG043200 Rh4AG260400 Rh4BG266100 Rh4CG071300 Rh4DG155900 Rh5AG213100 Rh5AG238500 Rh5AG238600 Rh5AG296300 Rh5AG463800 Rh5CG236400 Rh5CG269500 Rh5CG269600 Rh5DG131600 Rh6AG074700 Rh6AG077500 Rh6AG093000 Rh6AG286000 Rh6CG246600 Rh7AG171100 Rh7AG303600 Rh7AG389400 Rh7AG390000 Rh7AG446200 Rh7CG251500 Rh7CG408700 Rh7DG385600
rosa_wichuraiana Rw0G014360 Rw0G015950 Rw2G017860 Rw2G027110 Rw4G037790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 742
Acc36I ACCTGC 2 cut(s) 894, 1874
AccI GTMKAC 1 cut(s) 726
AccII CGCG 2 cut(s) 116, 323
AclWI GGATC 3 cut(s) 1214, 1695, 1820
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 2 cut(s) 801, 1948
AcuI CTGAAG 1 cut(s) 1295
AcvI CACGTG 1 cut(s) 1331
AfaI GTAC 3 cut(s) 590, 1223, 1856
AfiI CCNNNNNNNGG 3 cut(s) 283, 317, 640
AjiI CACGTC 1 cut(s) 1847
AjnI CCWGG 3 cut(s) 276, 784, 1403
AloI GAACNNNNNNTCC 2 cut(s) 654, 686
AluBI AGCT 4 cut(s) 386, 432, 896, 1894
AluI AGCT 4 cut(s) 386, 432, 896, 1894
Alw21I GWGCWC 1 cut(s) 1969
Alw26I GTCTC 5 cut(s) 159, 251, 293, 864, 1642
Alw44I GTGCAC 1 cut(s) 1965
AlwI GGATC 3 cut(s) 1214, 1695, 1820
AlwNI CAGNNNCTG 1 cut(s) 517
ApaLI GTGCAC 1 cut(s) 1965
ApeKI GCWGC 5 cut(s) 379, 1143, 1400, 1840, 1871
ApoI RAATTY 2 cut(s) 801, 1948
Asp700I GAANNNNTTC 1 cut(s) 648
AspLEI GCGC 3 cut(s) 118, 141, 323
AspS9I GGNCC 9 cut(s) 95, 169, 217, 247, 271, 308, 333, 1044, 1459
AsuHPI GGTGA 5 cut(s) 56, 451, 893, 1501, 1919
AsuII TTCGAA 1 cut(s) 1428
AvaII GGWCC 4 cut(s) 169, 333, 1044, 1459
BaeGI GKGCMC 1 cut(s) 1969
BalI TGGCCA 1 cut(s) 188
BanII GRGCYC 1 cut(s) 633
BarI GAAGNNNNNNTAC 2 cut(s) 808, 840
BbrPI CACGTG 1 cut(s) 1331
BbsI GAAGAC 4 cut(s) 1073, 1235, 1371, 1759
Bbv12I GWGCWC 1 cut(s) 1969
BbvCI CCTCAGC 1 cut(s) 779
BbvI GCAGC 5 cut(s) 366, 1155, 1387, 1827, 1858
BccI CCATC 6 cut(s) 197, 289, 464, 844, 1133, 1227
BceAI ACGGC 5 cut(s) 276, 300, 535, 734, 1510
BcgI CGANNNNNNTGC 4 cut(s) 1869, 1903, 1946, 1980
BciT130I CCWGG 3 cut(s) 278, 786, 1405
BciVI GTATCC 3 cut(s) 136, 274, 711
BclI TGATCA 2 cut(s) 1347, 1899
BcoDI GTCTC 5 cut(s) 159, 251, 293, 864, 1642
BfaI CTAG 1 cut(s) 680
BfmI CTRYAG 2 cut(s) 1256, 1519
BfuAI ACCTGC 2 cut(s) 894, 1874
BfuI GTATCC 3 cut(s) 136, 274, 711
BisI GCNGC 6 cut(s) 307, 380, 1144, 1401, 1841, 1872
BlpI GCTNAGC 1 cut(s) 1011
BlsI GCNGC 6 cut(s) 308, 381, 1145, 1402, 1842, 1873
BmcAI AGTACT 1 cut(s) 1223
Bme1390I CCNGG 3 cut(s) 278, 786, 1405
Bme18I GGWCC 4 cut(s) 169, 333, 1044, 1459
BmgBI CACGTC 1 cut(s) 1847
BmgT120I GGNCC 9 cut(s) 95, 169, 217, 247, 271, 308, 333, 1044, 1459
BmiI GGNNCC 5 cut(s) 27, 91, 334, 632, 1461
BmrFI CCNGG 3 cut(s) 278, 786, 1405
BmrI ACTGGG 1 cut(s) 1788
BmsI GCATC 9 cut(s) 40, 46, 62, 126, 366, 377, 1380, 1809, 1950
BmuI ACTGGG 1 cut(s) 1788
BoxI GACNNNNGTC 1 cut(s) 1702
BpiI GAAGAC 4 cut(s) 1073, 1235, 1371, 1759
Bpu10I CCTNAGC 2 cut(s) 165, 779
Bpu1102I GCTNAGC 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 1428
BpuEI CTTGAG 1 cut(s) 1871
BsaAI YACGTR 1 cut(s) 1331
BsaI GGTCTC 2 cut(s) 159, 1642
BsaJI CCNNGG 4 cut(s) 555, 750, 784, 785
BsaXI ACNNNNNCTCC 2 cut(s) 1205, 1235
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 317, 640
Bse1I ACTGG 5 cut(s) 307, 580, 1112, 1614, 1783
BseBI CCWGG 3 cut(s) 278, 786, 1405
BseDI CCNNGG 4 cut(s) 555, 750, 784, 785
BseGI GGATG 3 cut(s) 838, 925, 1999
BseLI CCNNNNNNNGG 3 cut(s) 283, 317, 640
BseMII CTCAG 5 cut(s) 179, 524, 793, 1002, 1494
BseNI ACTGG 5 cut(s) 307, 580, 1112, 1614, 1783
BseRI GAGGAG 2 cut(s) 1229, 1232
BseSI GKGCMC 1 cut(s) 1969
BseXI GCAGC 5 cut(s) 366, 1155, 1387, 1827, 1858
Bsh1236I CGCG 2 cut(s) 116, 323
Bsh1285I CGRYCG 1 cut(s) 1542
BsiEI CGRYCG 1 cut(s) 1542
BsiHKAI GWGCWC 1 cut(s) 1969
BsiSI CCGG 2 cut(s) 93, 1721
BslFI GGGAC 4 cut(s) 346, 623, 857, 1336
BslI CCNNNNNNNGG 3 cut(s) 283, 317, 640
BsmAI GTCTC 5 cut(s) 159, 251, 293, 864, 1642
BsmBI CGTCTC 1 cut(s) 251
BsmFI GGGAC 4 cut(s) 346, 623, 857, 1336
BsmI GAATGC 1 cut(s) 1873
Bso31I GGTCTC 2 cut(s) 159, 1642
Bsp119I TTCGAA 1 cut(s) 1428
Bsp1286I GDGCHC 2 cut(s) 633, 1969
Bsp143I GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
Bsp1720I GCTNAGC 1 cut(s) 1011
Bsp19I CCATGG 1 cut(s) 555
BspCNI CTCAG 5 cut(s) 178, 523, 792, 1003, 1495
BspFNI CGCG 2 cut(s) 116, 323
BspLI GGNNCC 5 cut(s) 27, 91, 334, 632, 1461
BspMI ACCTGC 2 cut(s) 894, 1874
BspPI GGATC 3 cut(s) 1214, 1695, 1820
BspT104I TTCGAA 1 cut(s) 1428
BspTNI GGTCTC 2 cut(s) 159, 1642
BsrI ACTGG 5 cut(s) 307, 580, 1112, 1614, 1783
BssECI CCNNGG 4 cut(s) 555, 750, 784, 785
BssMI GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
BssT1I CCWWGG 1 cut(s) 555
Bst2UI CCWGG 3 cut(s) 278, 786, 1405
BstAPI GCANNNNNTGC 2 cut(s) 1400, 1567
BstBAI YACGTR 1 cut(s) 1331
BstBI TTCGAA 1 cut(s) 1428
BstC8I GCNNGC 6 cut(s) 250, 274, 384, 1876, 1892, 1965
BstDEI CTNAG 6 cut(s) 165, 483, 510, 779, 1011, 1503
BstDSI CCRYGG 2 cut(s) 555, 750
BstEII GGTNACC 1 cut(s) 881
BstF5I GGATG 3 cut(s) 838, 925, 1999
BstFNI CGCG 2 cut(s) 116, 323
BstHHI GCGC 3 cut(s) 118, 141, 323
BstKTI GATC 8 cut(s) 606, 1209, 1288, 1350, 1509, 1690, 1815, 1902
BstMAI GTCTC 5 cut(s) 159, 251, 293, 864, 1642
BstMBI GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
BstMCI CGRYCG 1 cut(s) 1542
BstNI CCWGG 3 cut(s) 278, 786, 1405
BstPAI GACNNNNGTC 1 cut(s) 1702
BstPI GGTNACC 1 cut(s) 881
BstSCI CCNGG 3 cut(s) 276, 784, 1403
BstSFI CTRYAG 2 cut(s) 1256, 1519
BstSLI GKGCMC 1 cut(s) 1969
BstUI CGCG 2 cut(s) 116, 323
BstV1I GCAGC 5 cut(s) 366, 1155, 1387, 1827, 1858
BstV2I GAAGAC 4 cut(s) 1073, 1235, 1371, 1759
BstX2I RGATCY 1 cut(s) 1687
BstYI RGATCY 1 cut(s) 1687
BsuI GTATCC 3 cut(s) 136, 274, 711
BtgI CCRYGG 2 cut(s) 555, 750
BtrI CACGTC 1 cut(s) 1847
BtsCI GGATG 3 cut(s) 838, 925, 1999
BtsIMutI CAGTG 6 cut(s) 518, 573, 702, 1119, 1305, 1607
BveI ACCTGC 2 cut(s) 894, 1874
Cac8I GCNNGC 6 cut(s) 250, 274, 384, 1876, 1892, 1965
CaiI CAGNNNCTG 1 cut(s) 517
CfoI GCGC 3 cut(s) 118, 141, 323
Cfr13I GGNCC 9 cut(s) 95, 169, 217, 247, 271, 308, 333, 1044, 1459
CseI GACGC 4 cut(s) 170, 497, 1004, 1811
Csp6I GTAC 3 cut(s) 589, 1222, 1855
CviQI GTAC 3 cut(s) 589, 1222, 1855
DdeI CTNAG 6 cut(s) 165, 483, 510, 779, 1011, 1503
DpnI GATC 8 cut(s) 605, 1208, 1287, 1349, 1508, 1689, 1814, 1901
DpnII GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
DrdI GACNNNNNNGTC 1 cut(s) 742
DseDI GACNNNNNNGTC 1 cut(s) 742
EaeI YGGCCR 1 cut(s) 186
EciI GGCGGA 3 cut(s) 221, 251, 537
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 1 cut(s) 633
Eco31I GGTCTC 2 cut(s) 159, 1642
Eco47I GGWCC 4 cut(s) 169, 333, 1044, 1459
Eco57I CTGAAG 1 cut(s) 1295
Eco72I CACGTG 1 cut(s) 1331
Eco91I GGTNACC 1 cut(s) 881
EcoO109I RGGNCCY 2 cut(s) 333, 1459
EcoO65I GGTNACC 1 cut(s) 881
EcoRII CCWGG 3 cut(s) 276, 784, 1403
EcoT14I CCWWGG 1 cut(s) 555
EcoT38I GRGCYC 1 cut(s) 633
ErhI CCWWGG 1 cut(s) 555
Esp3I CGTCTC 1 cut(s) 251
FalI AAGNNNNNCTT 2 cut(s) 1173, 1205
FaqI GGGAC 4 cut(s) 346, 623, 857, 1336
FauI CCCGC 2 cut(s) 257, 281
FauNDI CATATG 2 cut(s) 493, 614
FbaI TGATCA 2 cut(s) 1347, 1899
FblI GTMKAC 1 cut(s) 726
Fnu4HI GCNGC 6 cut(s) 307, 380, 1144, 1401, 1841, 1872
FokI GGATG 3 cut(s) 845, 932, 2006
FriOI GRGCYC 1 cut(s) 633
Fsp4HI GCNGC 6 cut(s) 307, 380, 1144, 1401, 1841, 1872
FspBI CTAG 1 cut(s) 680
GlaI GCGC 3 cut(s) 117, 140, 322
GluI GCNGC 6 cut(s) 307, 380, 1144, 1401, 1841, 1872
HapII CCGG 2 cut(s) 93, 1721
HgaI GACGC 4 cut(s) 170, 497, 1004, 1811
HhaI GCGC 3 cut(s) 118, 141, 323
Hin6I GCGC 3 cut(s) 116, 139, 321
HinP1I GCGC 3 cut(s) 116, 139, 321
HincII GTYRAC 1 cut(s) 1098
HindII GTYRAC 1 cut(s) 1098
HindIII AAGCTT 3 cut(s) 384, 894, 1892
HinfI GANTC 5 cut(s) 401, 758, 965, 1661, 1698
HpaII CCGG 2 cut(s) 93, 1721
HphI GGTGA 5 cut(s) 56, 451, 893, 1501, 1919
Hpy166II GTNNAC 5 cut(s) 85, 727, 1098, 1229, 1967
Hpy188I TCNGA 4 cut(s) 130, 1002, 1270, 1666
Hpy8I GTNNAC 5 cut(s) 85, 727, 1098, 1229, 1967
HpyCH4IV ACGT 3 cut(s) 723, 1330, 1846
HpyF3I CTNAG 6 cut(s) 165, 483, 510, 779, 1011, 1503
HpySE526I ACGT 3 cut(s) 723, 1330, 1846
HspAI GCGC 3 cut(s) 116, 139, 321
Ksp22I TGATCA 2 cut(s) 1347, 1899
Kzo9I GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
LmnI GCTCC 1 cut(s) 636
Lsp1109I GCAGC 5 cut(s) 366, 1155, 1387, 1827, 1858
LweI GCATC 9 cut(s) 40, 46, 62, 126, 366, 377, 1380, 1809, 1950
MaeI CTAG 1 cut(s) 680
MaeII ACGT 3 cut(s) 723, 1330, 1846
MaeIII GTNAC 5 cut(s) 881, 939, 1016, 1251, 1309
MalI GATC 8 cut(s) 605, 1208, 1287, 1349, 1508, 1689, 1814, 1901
MboI GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
MflI RGATCY 1 cut(s) 1687
MhlI GDGCHC 2 cut(s) 633, 1969
MlsI TGGCCA 1 cut(s) 188
MluCI AATT 8 cut(s) 451, 801, 988, 1237, 1806, 1826, 1917, 1948
MluNI TGGCCA 1 cut(s) 188
MlyI GAGTC 2 cut(s) 974, 1692
MmeI TCCRAC 2 cut(s) 639, 1527
Mox20I TGGCCA 1 cut(s) 188
MroXI GAANNNNTTC 1 cut(s) 648
MscI TGGCCA 1 cut(s) 188
MseI TTAA 6 cut(s) 600, 720, 810, 974, 1296, 1946
MslI CAYNNNNRTG 6 cut(s) 42, 80, 1475, 1481, 1972, 1992
Msp20I TGGCCA 1 cut(s) 188
MspI CCGG 2 cut(s) 93, 1721
MspR9I CCNGG 3 cut(s) 278, 786, 1405
Mva1269I GAATGC 1 cut(s) 1873
MvaI CCWGG 3 cut(s) 278, 786, 1405
MvnI CGCG 2 cut(s) 116, 323
NcoI CCATGG 1 cut(s) 555
NdeI CATATG 2 cut(s) 493, 614
NdeII GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
NlaIV GGNNCC 5 cut(s) 27, 91, 334, 632, 1461
NmeAIII GCCGAG 1 cut(s) 1904
NmuCI GTSAC 3 cut(s) 881, 1016, 1251
NspV TTCGAA 1 cut(s) 1428
PasI CCCWGGG 1 cut(s) 785
PctI GAATGC 1 cut(s) 1873
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 3 cut(s) 401, 758, 1661
PkrI GCNGC 6 cut(s) 308, 381, 1145, 1402, 1842, 1873
PleI GAGTC 2 cut(s) 973, 1692
PmaCI CACGTG 1 cut(s) 1331
PmlI CACGTG 1 cut(s) 1331
PpsI GAGTC 2 cut(s) 973, 1692
Ppu21I YACGTR 1 cut(s) 1331
PpuMI RGGWCCY 2 cut(s) 333, 1459
PshAI GACNNNNGTC 1 cut(s) 1702
Psp5II RGGWCCY 2 cut(s) 333, 1459
Psp6I CCWGG 3 cut(s) 276, 784, 1403
PspCI CACGTG 1 cut(s) 1331
PspEI GGTNACC 1 cut(s) 881
PspGI CCWGG 3 cut(s) 276, 784, 1403
PspN4I GGNNCC 5 cut(s) 27, 91, 334, 632, 1461
PspPI GGNCC 9 cut(s) 95, 169, 217, 247, 271, 308, 333, 1044, 1459
PspPPI RGGWCCY 2 cut(s) 333, 1459
PstNI CAGNNNCTG 1 cut(s) 517
PsuI RGATCY 1 cut(s) 1687
RsaI GTAC 3 cut(s) 590, 1223, 1856
RsaNI GTAC 3 cut(s) 589, 1222, 1855
RseI CAYNNNNRTG 6 cut(s) 42, 80, 1475, 1481, 1972, 1992
SaqAI TTAA 6 cut(s) 600, 720, 810, 974, 1296, 1946
SatI GCNGC 6 cut(s) 307, 380, 1144, 1401, 1841, 1872
Sau3AI GATC 8 cut(s) 603, 1206, 1285, 1347, 1506, 1687, 1812, 1899
Sau96I GGNCC 9 cut(s) 95, 169, 217, 247, 271, 308, 333, 1044, 1459
ScaI AGTACT 1 cut(s) 1223
SchI GAGTC 2 cut(s) 974, 1692
ScrFI CCNGG 3 cut(s) 278, 786, 1405
SduI GDGCHC 2 cut(s) 633, 1969
SfaNI GCATC 9 cut(s) 40, 46, 62, 126, 366, 377, 1380, 1809, 1950
SfcI CTRYAG 2 cut(s) 1256, 1519
SfuI TTCGAA 1 cut(s) 1428
SinI GGWCC 4 cut(s) 169, 333, 1044, 1459
SmiMI CAYNNNNRTG 6 cut(s) 42, 80, 1475, 1481, 1972, 1992
SmlI CTYRAG 1 cut(s) 1850
SmoI CTYRAG 1 cut(s) 1850
Sse9I AATT 8 cut(s) 451, 801, 988, 1237, 1806, 1826, 1917, 1948
SspI AATATT 1 cut(s) 1597
SspMI CTAG 1 cut(s) 680
StyD4I CCNGG 3 cut(s) 276, 784, 1403
StyI CCWWGG 1 cut(s) 555
TaiI ACGT 3 cut(s) 726, 1333, 1849
TaqI TCGA 4 cut(s) 56, 1428, 1696, 1956
TasI AATT 8 cut(s) 451, 801, 988, 1237, 1806, 1826, 1917, 1948
TatI WGTACW 3 cut(s) 588, 1221, 1854
TauI GCSGC 1 cut(s) 309
TfiI GAWTC 3 cut(s) 401, 758, 1661
Tru1I TTAA 6 cut(s) 600, 720, 810, 974, 1296, 1946
Tru9I TTAA 6 cut(s) 600, 720, 810, 974, 1296, 1946
TscAI CASTG 6 cut(s) 518, 580, 702, 1119, 1312, 1614
TseFI GTSAC 3 cut(s) 881, 1016, 1251
TseI GCWGC 5 cut(s) 379, 1143, 1400, 1840, 1871
Tsp45I GTSAC 3 cut(s) 881, 1016, 1251
TspGWI ACGGA 1 cut(s) 1984
TspRI CASTG 6 cut(s) 518, 580, 702, 1119, 1312, 1614
VneI GTGCAC 1 cut(s) 1965
VpaK11BI GGWCC 4 cut(s) 169, 333, 1044, 1459
XapI RAATTY 2 cut(s) 801, 1948
XmiI GTMKAC 1 cut(s) 726
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 1 cut(s) 680
ZrmI AGTACT 1 cut(s) 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.