Rorug07G0029900
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
2076575 .. 2079533
2959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0029900.1

Sequence Viewer

Length: 921 bp
ATGCCGCCGAGCGCCGATCTGGACCGTCAGATCGACCACCTGATGCAGTGCAAGCCTCTGACGGAGGCGGAGGTGAAGACGCTGTGCGAGCAAGCGAGGACGATCCTCGTCGAGGAGTGGAATGTGCAGCCGGTCAAGTGTCCGGTCACCGTCTGCGGCGACATCCACGGCCAGTTTCACGACCTGGTTGAGCTCTTTCGGATCGGCGGCAGTGCTCCCGATACCAATTATCTCTTCATGGGTGACTATGTAGATCGAGGATACTACTCAGTGGAGACTGTCACACTTCTAGTGGCCCTGAAAGTACGTTACAGAGATAGAATTACAATTCTCAGAGGAAATCATGAGAGTCGGCAGATTACTCAAGTGTATGGGTTTTATGATGAGTGTTTGAGGAAATATGGAAATGCTAATGTCTGGAAGCATTTCACCGACCTTTTTGATTATCTGCCATTGACAGCTTTAATCGAGAGTCAGATCTTCTGCTTGCATGGTGGACTATCCCCCTCTTTGGATACATTGGACAATATTCGGGCTCTTGATCGCATACAGGAGGTTCCTCATGAGGGCCCAATGTGTGATCTCTTGTGGTCTGATCCGGATGATCGATGTGGTTGGGGAATATCTCCTCGAGGTGCAGGGTATACTTTTGGTCAAGATATAGCAGCTCAGTTTAACCATACTAATGGGCTGAGTCTTATTTCTAGAGCTCACCAGCTTGTTATGGAAGGCTACAATTGGTGCCAGGAAAAGAACGTTGTAACGGTATTTAGTGCTCCAAATTACTGCTATCGATGTGGCAATATGGCTGCAATCCTCGAGATTGGAGAGAATATGGAGCAGAATTTCCTTCAATTTGACCCAGCACCTCGTCAGGTTGAACCCGATACAACACGAAGAACTCCAGACTATTTTTTGTAA

Protein Analysis

306

Amino Acids

34.96

Weight (kDa)

4.96

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 48 - 241 2.4e-46 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000372)

Species Orthologous Gene IDs
pyrus_communis pycom04g09000
rosa_chinensis RchiOBHm_Chr1g0319921 RchiOBHm_Chr2g0124671 RchiOBHm_Chr3g0488631 RchiOBHm_Chr3g0495191 RchiOBHm_Chr5g0067451 RchiOBHm_Chr6g0269581 RchiOBHm_Chr7g0210411 RchiOBHm_Chr7g0212341 RchiOBHm_Chr7g0214191
rosa_laevigata RLG00000003882 RLG00000008030 RLG00000011591 RLG00000016235 RLG00000018631 RLG00000031951 RLG00000032135 RLG00000032548 RLG00000033239
rosa_multiflora Rmu_sc0000281.1_g000015 Rmu_sc0000516.1_g000020 Rmu_sc0000816.1_g000025 Rmu_sc0001850.1_g000002 Rmu_sc0003260.1_g000025 Rmu_sc0007581.1_g000007 Rmu_sc0009241.1_g000001
rosa_roxburghii Rroxscaffold_3G00218290 Rroxscaffold_3G00240930 Rroxscaffold_4G00300430 Rroxscaffold_5G00334810 Rroxscaffold_5G00360330 Rroxscaffold_7G00180190 Rroxscaffold_7G00192890
rosa_rugosa Rorug01G0357800 Rorug01G0357900 Rorug03G0350400 Rorug05G0174000 Rorug05G0231100 Rorug05G0231100 Rorug05G0231200 Rorug05G0231200 Rorug05G0577100 Rorug07G0029800 Rorug07G0029900 Rorug07G0146200
rosa_samantha Rh1AG039300 Rh1AG155100 Rh1AG173000 Rh1AG200900 Rh1AG276400 Rh1BG055400 Rh1BG111700 Rh1CG081000 Rh1CG161100 Rh1CG161200 Rh1CG247000 Rh1CG264000 Rh1DG031600 Rh1DG163400 Rh2AG236000 Rh2AG236100 Rh2AG277400 Rh2AG277500 Rh2AG309700 Rh2AG339600 Rh2BG221000 Rh2DG243300 Rh2DG243400 Rh2DG267900 Rh2DG434000 Rh3AG280300 Rh3AG288700 Rh3CG224100 Rh4AG043200 Rh4AG260400 Rh4BG266100 Rh4CG071300 Rh4DG155900 Rh5AG213100 Rh5AG238500 Rh5AG238600 Rh5AG296300 Rh5AG463800 Rh5CG236400 Rh5CG269500 Rh5CG269600 Rh5DG131600 Rh6AG074700 Rh6AG077500 Rh6AG093000 Rh6AG286000 Rh6CG246600 Rh7AG171100 Rh7AG303600 Rh7AG389400 Rh7AG390000 Rh7AG446200 Rh7CG251500 Rh7CG408700 Rh7DG385600
rosa_wichuraiana Rw0G014360 Rw0G015950 Rw2G017860 Rw2G027110 Rw4G037790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 630
AccB1I GGYRCC 1 cut(s) 741
AccI GTMKAC 1 cut(s) 644
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 4 cut(s) 5, 68, 156, 207
AclI AACGTT 1 cut(s) 756
AclWI GGATC 3 cut(s) 97, 209, 590
AcoI YGGCCR 1 cut(s) 169
AcsI RAATTY 1 cut(s) 844
AfaI GTAC 1 cut(s) 306
AfiI CCNNNNNNNGG 3 cut(s) 112, 511, 566
AgsI TTSAA 2 cut(s) 854, 881
AjnI CCWGG 2 cut(s) 183, 744
AjuI GAANNNNNNNTTGG 2 cut(s) 218, 250
AluBI AGCT 5 cut(s) 193, 461, 668, 710, 718
AluI AGCT 5 cut(s) 193, 461, 668, 710, 718
Alw21I GWGCWC 4 cut(s) 195, 217, 712, 778
Alw26I GTCTC 1 cut(s) 269
AlwI GGATC 3 cut(s) 97, 209, 590
Ama87I CYCGRG 2 cut(s) 630, 818
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 3 cut(s) 169, 294, 568
ApaI GGGCCC 1 cut(s) 572
ApeKI GCWGC 3 cut(s) 127, 665, 809
ApoI RAATTY 1 cut(s) 844
Asp700I GAANNNNTTC 1 cut(s) 425
AspLEI GCGC 1 cut(s) 14
AspS9I GGNCC 4 cut(s) 22, 295, 568, 569
AsuHPI GGTGA 5 cut(s) 85, 139, 254, 421, 704
AvaI CYCGRG 2 cut(s) 630, 818
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 572
BanI GGYRCC 1 cut(s) 741
BanII GRGCYC 4 cut(s) 195, 538, 572, 712
BbsI GAAGAC 1 cut(s) 83
Bbv12I GWGCWC 4 cut(s) 195, 217, 712, 778
BbvI GCAGC 3 cut(s) 139, 677, 796
BceAI ACGGC 1 cut(s) 184
BciT130I CCWGG 2 cut(s) 185, 746
BciVI GTATCC 2 cut(s) 254, 508
BcoDI GTCTC 1 cut(s) 269
BfaI CTAG 2 cut(s) 290, 705
BfoI RGCGCY 1 cut(s) 15
BfuI GTATCC 2 cut(s) 254, 508
BglII AGATCT 1 cut(s) 477
BisI GCNGC 6 cut(s) 5, 128, 157, 208, 666, 810
BlsI GCNGC 6 cut(s) 6, 129, 158, 209, 667, 811
Bme1390I CCNGG 2 cut(s) 185, 746
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 2 cut(s) 630, 818
BmgT120I GGNCC 4 cut(s) 22, 295, 568, 569
BmiI GGNNCC 3 cut(s) 558, 570, 743
BmrFI CCNGG 2 cut(s) 185, 746
BmsI GCATC 1 cut(s) 33
BpiI GAAGAC 1 cut(s) 83
BpmI CTGGAG 1 cut(s) 888
BpuEI CTTGAG 1 cut(s) 348
Bsa29I ATCGAT 2 cut(s) 607, 793
BsaJI CCNNGG 1 cut(s) 166
BsaWI WCCGGW 2 cut(s) 142, 598
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 511, 566
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 172
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 2 cut(s) 185, 746
BseCI ATCGAT 2 cut(s) 607, 793
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 2 cut(s) 162, 607
BseLI CCNNNNNNNGG 3 cut(s) 112, 511, 566
BseMII CTCAG 4 cut(s) 282, 346, 683, 683
BseNI ACTGG 1 cut(s) 172
BseRI GAGGAG 2 cut(s) 128, 618
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 3 cut(s) 139, 677, 796
BseYI CCCAGC 1 cut(s) 862
BsgI GTGCAG 2 cut(s) 146, 657
BshFI GGCC 3 cut(s) 171, 296, 570
BshNI GGYRCC 1 cut(s) 741
BshVI ATCGAT 2 cut(s) 607, 793
BsiHKAI GWGCWC 4 cut(s) 195, 217, 712, 778
BsiHKCI CYCGRG 2 cut(s) 630, 818
BsiSI CCGG 3 cut(s) 131, 143, 599
BslI CCNNNNNNNGG 3 cut(s) 112, 511, 566
BsmAI GTCTC 1 cut(s) 269
BsnI GGCC 3 cut(s) 171, 296, 570
BsoBI CYCGRG 2 cut(s) 630, 818
Bsp120I GGGCCC 1 cut(s) 568
Bsp1286I GDGCHC 6 cut(s) 195, 217, 538, 572, 712, 778
Bsp13I TCCGGA 1 cut(s) 598
BspACI CCGC 4 cut(s) 5, 68, 156, 207
BspANI GGCC 3 cut(s) 171, 296, 570
BspCNI CTCAG 4 cut(s) 281, 345, 682, 684
BspDI ATCGAT 2 cut(s) 607, 793
BspEI TCCGGA 1 cut(s) 598
BspHI TCATGA 2 cut(s) 343, 562
BspLI GGNNCC 3 cut(s) 558, 570, 743
BspPI GGATC 3 cut(s) 97, 209, 590
BspT107I GGYRCC 1 cut(s) 741
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 1 cut(s) 172
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 1 cut(s) 166
BssNAI GTATAC 1 cut(s) 645
Bst1107I GTATAC 1 cut(s) 645
Bst2UI CCWGG 2 cut(s) 185, 746
Bst4CI ACNGT 4 cut(s) 26, 151, 280, 766
Bst6I CTCTTC 1 cut(s) 239
BstC8I GCNNGC 4 cut(s) 53, 89, 93, 488
BstDEI CTNAG 4 cut(s) 268, 332, 669, 692
BstDSI CCRYGG 1 cut(s) 166
BstEII GGTNACC 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 110
BstF5I GGATG 2 cut(s) 162, 607
BstH2I RGCGCY 1 cut(s) 15
BstHHI GCGC 1 cut(s) 14
BstMAI GTCTC 1 cut(s) 269
BstMWI GCNNNNNNNGC 2 cut(s) 52, 88
BstNI CCWGG 2 cut(s) 185, 746
BstPI GGTNACC 1 cut(s) 145
BstSCI CCNGG 2 cut(s) 183, 744
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 3 cut(s) 139, 677, 796
BstV2I GAAGAC 1 cut(s) 83
BstX2I RGATCY 1 cut(s) 477
BstXI CCANNNNNNTGG 1 cut(s) 686
BstYI RGATCY 1 cut(s) 477
BstZ17I GTATAC 1 cut(s) 645
Bsu15I ATCGAT 2 cut(s) 607, 793
BsuI GTATCC 2 cut(s) 254, 508
BsuRI GGCC 3 cut(s) 171, 296, 570
BsuTUI ATCGAT 2 cut(s) 607, 793
BtgI CCRYGG 1 cut(s) 166
BtsCI GGATG 2 cut(s) 162, 607
BtsI GCAGTG 2 cut(s) 53, 217
BtsIMutI CAGTG 3 cut(s) 53, 217, 276
Cac8I GCNNGC 4 cut(s) 53, 89, 93, 488
CciI TCATGA 2 cut(s) 343, 562
CfoI GCGC 1 cut(s) 14
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 4 cut(s) 22, 295, 568, 569
ClaI ATCGAT 2 cut(s) 607, 793
CseI GACGC 1 cut(s) 88
CsiI ACCWGGT 1 cut(s) 183
Csp6I GTAC 1 cut(s) 305
CviAII CATG 4 cut(s) 238, 344, 491, 563
CviQI GTAC 1 cut(s) 305
DdeI CTNAG 4 cut(s) 268, 332, 669, 692
EaeI YGGCCR 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 239
EarI CTCTTC 1 cut(s) 239
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 2 cut(s) 193, 710
Eco24I GRGCYC 4 cut(s) 195, 538, 572, 712
Eco47I GGWCC 1 cut(s) 22
Eco53kI GAGCTC 2 cut(s) 193, 710
Eco88I CYCGRG 2 cut(s) 630, 818
Eco91I GGTNACC 1 cut(s) 145
EcoICRI GAGCTC 2 cut(s) 193, 710
EcoNI CCTNNNNNAGG 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 568
EcoO65I GGTNACC 1 cut(s) 145
EcoRII CCWGG 2 cut(s) 183, 744
EcoT38I GRGCYC 4 cut(s) 195, 538, 572, 712
FaeI CATG 4 cut(s) 241, 347, 494, 566
FatI CATG 4 cut(s) 237, 343, 490, 562
FblI GTMKAC 1 cut(s) 644
Fnu4HI GCNGC 6 cut(s) 5, 128, 157, 208, 666, 810
FokI GGATG 2 cut(s) 149, 614
FriOI GRGCYC 4 cut(s) 195, 538, 572, 712
Fsp4HI GCNGC 6 cut(s) 5, 128, 157, 208, 666, 810
FspBI CTAG 2 cut(s) 290, 705
GlaI GCGC 1 cut(s) 13
GluI GCNGC 6 cut(s) 5, 128, 157, 208, 666, 810
GsaI CCCAGC 1 cut(s) 866
GsuI CTGGAG 1 cut(s) 888
HaeII RGCGCY 1 cut(s) 15
HaeIII GGCC 3 cut(s) 171, 296, 570
HapII CCGG 3 cut(s) 131, 143, 599
HgaI GACGC 1 cut(s) 88
HhaI GCGC 1 cut(s) 14
Hin1II CATG 4 cut(s) 241, 347, 494, 566
Hin6I GCGC 1 cut(s) 12
HinP1I GCGC 1 cut(s) 12
HinfI GANTC 3 cut(s) 349, 472, 694
HpaII CCGG 3 cut(s) 131, 143, 599
HphI GGTGA 5 cut(s) 85, 139, 254, 421, 704
Hpy166II GTNNAC 2 cut(s) 497, 645
Hpy188I TCNGA 6 cut(s) 30, 60, 201, 335, 477, 595
Hpy8I GTNNAC 2 cut(s) 497, 645
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 2 cut(s) 722, 860
HpyCH4III ACNGT 4 cut(s) 26, 151, 280, 766
HpyCH4IV ACGT 2 cut(s) 307, 756
HpyCH4V TGCA 6 cut(s) 46, 51, 127, 490, 638, 812
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 88
HpyF3I CTNAG 4 cut(s) 268, 332, 669, 692
HpySE526I ACGT 2 cut(s) 307, 756
Hsp92II CATG 4 cut(s) 241, 347, 494, 566
HspAI GCGC 1 cut(s) 12
Kpn2I TCCGGA 1 cut(s) 598
LmnI GCTCC 3 cut(s) 220, 781, 838
Lsp1109I GCAGC 3 cut(s) 139, 677, 796
LweI GCATC 1 cut(s) 33
MabI ACCWGGT 1 cut(s) 183
MaeI CTAG 2 cut(s) 290, 705
MaeII ACGT 2 cut(s) 307, 756
MaeIII GTNAC 5 cut(s) 145, 242, 280, 308, 760
MboII GAAGA 4 cut(s) 88, 226, 472, 909
MfeI CAATTG 1 cut(s) 736
MflI RGATCY 1 cut(s) 477
MhlI GDGCHC 6 cut(s) 195, 217, 538, 572, 712, 778
MluCI AATT 7 cut(s) 226, 321, 327, 736, 781, 844, 854
MlyI GAGTC 3 cut(s) 358, 481, 703
MroI TCCGGA 1 cut(s) 598
MroXI GAANNNNTTC 1 cut(s) 425
MseI TTAA 2 cut(s) 464, 675
MslI CAYNNNNRTG 1 cut(s) 684
MspI CCGG 3 cut(s) 131, 143, 599
MspR9I CCNGG 2 cut(s) 185, 746
MunI CAATTG 1 cut(s) 736
MvaI CCWGG 2 cut(s) 185, 746
MwoI GCNNNNNNNGC 2 cut(s) 52, 88
NlaIII CATG 4 cut(s) 241, 347, 494, 566
NlaIV GGNNCC 3 cut(s) 558, 570, 743
NmeAIII GCCGAG 1 cut(s) 33
NmuCI GTSAC 3 cut(s) 145, 242, 280
PaeR7I CTCGAG 2 cut(s) 630, 818
PagI TCATGA 2 cut(s) 343, 562
PdmI GAANNNNTTC 1 cut(s) 425
PkrI GCNGC 6 cut(s) 6, 129, 158, 209, 667, 811
PleI GAGTC 3 cut(s) 357, 480, 702
PpsI GAGTC 3 cut(s) 357, 480, 702
Psp124BI GAGCTC 2 cut(s) 195, 712
Psp1406I AACGTT 1 cut(s) 756
Psp6I CCWGG 2 cut(s) 183, 744
PspEI GGTNACC 1 cut(s) 145
PspFI CCCAGC 1 cut(s) 862
PspGI CCWGG 2 cut(s) 183, 744
PspN4I GGNNCC 3 cut(s) 558, 570, 743
PspOMI GGGCCC 1 cut(s) 568
PspPI GGNCC 4 cut(s) 22, 295, 568, 569
PspXI VCTCGAGB 1 cut(s) 630
PsuI RGATCY 1 cut(s) 477
RsaI GTAC 1 cut(s) 306
RsaNI GTAC 1 cut(s) 305
RseI CAYNNNNRTG 1 cut(s) 684
SacI GAGCTC 2 cut(s) 195, 712
SaqAI TTAA 2 cut(s) 464, 675
SatI GCNGC 6 cut(s) 5, 128, 157, 208, 666, 810
Sau96I GGNCC 4 cut(s) 22, 295, 568, 569
SchI GAGTC 3 cut(s) 358, 481, 703
ScrFI CCNGG 2 cut(s) 185, 746
SduI GDGCHC 6 cut(s) 195, 217, 538, 572, 712, 778
SexAI ACCWGGT 1 cut(s) 183
SfaNI GCATC 1 cut(s) 33
Sfr274I CTCGAG 2 cut(s) 630, 818
SinI GGWCC 1 cut(s) 22
SlaI CTCGAG 2 cut(s) 630, 818
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 3 cut(s) 363, 630, 818
SmoI CTYRAG 3 cut(s) 363, 630, 818
Sse9I AATT 7 cut(s) 226, 321, 327, 736, 781, 844, 854
SsiI CCGC 4 cut(s) 5, 68, 156, 207
SspI AATATT 1 cut(s) 529
SspMI CTAG 2 cut(s) 290, 705
SstI GAGCTC 2 cut(s) 195, 712
StyD4I CCNGG 2 cut(s) 183, 744
TaaI ACNGT 4 cut(s) 26, 151, 280, 766
TaiI ACGT 2 cut(s) 310, 759
TaqI TCGA 8 cut(s) 33, 111, 256, 468, 607, 631, 793, 819
TasI AATT 7 cut(s) 226, 321, 327, 736, 781, 844, 854
TauI GCSGC 3 cut(s) 7, 159, 210
Tru1I TTAA 2 cut(s) 464, 675
Tru9I TTAA 2 cut(s) 464, 675
TscAI CASTG 3 cut(s) 53, 217, 276
TseFI GTSAC 3 cut(s) 145, 242, 280
TseI GCWGC 3 cut(s) 127, 665, 809
Tsp45I GTSAC 3 cut(s) 145, 242, 280
TspDTI ATGAA 1 cut(s) 226
TspGWI ACGGA 1 cut(s) 77
TspRI CASTG 3 cut(s) 53, 217, 276
VpaK11BI GGWCC 1 cut(s) 22
XagI CCTNNNNNAGG 1 cut(s) 110
XapI RAATTY 1 cut(s) 844
XbaI TCTAGA 1 cut(s) 704
XhoI CTCGAG 2 cut(s) 630, 818
XmiI GTMKAC 1 cut(s) 644
XmnI GAANNNNTTC 1 cut(s) 425
XspI CTAG 2 cut(s) 290, 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.